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Pregenerated sensors for GML2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000068600

Ensembl transcript IDs: ENSMUST00000096399.8, ENSMUST00000188180.2

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATTTCTTTCCTACAAGAAATGATGAATGGGCCCAAAAGGTGCTCTTaGCACTGTCTCTGCTTCACAAGGAAGCAACAAAGTACAAAGGTG +
Preference number: 1 (lower is better)
Translates to: ISFLQEMMNGPKRCS*HCLCFTRKQQSTKV
Trigger: CACCTTTGTACTTTGTTGCTTCCTTGTGAAGCAGAGACAGTGTCAAGAGCACCTTTTGGGCCCATTCATCATTTCTTGTAGGAAAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096399.8
3UTR CAA 90 bp TATTTCTTTCCTACAAGAAATGATGAATGGGCCCAAAAGGTGCTCTaGACACTGTCTCTGCTTCACAAGGAAGCAACAAAGTACAAAGGT +
Preference number: 2 (lower is better)
Translates to: YFFPTRNDEWAQKVL*TLSLLHKEATKYKG
Trigger: ACCTTTGTACTTTGTTGCTTCCTTGTGAAGCAGAGACAGTGTCAAGAGCACCTTTTGGGCCCATTCATCATTTCTTGTAGGAAAGAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096399.8
3UTR GCA 72 bp GTCTCTGCTTCACAAGGAAGCAACAAAGTACAAAGGTaGTTTCAACTGTGGGAAGATGAGTACACCCAGAGA +
Preference number: 3 (lower is better)
Translates to: VSASQGSNKVQR*FQLWEDEYTQR
Trigger: TCTCTGGGTGTACTCATCTTCCCACAGTTGAAAGCACCTTTGTACTTTGTTGCTTCCTTGTGAAGCAGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096399.8
3UTR TCA 72 bp CTACAAGAAATGATGAATGGGCCCAAAAGGTGCTCTTaGCACTGTCTCTGCTTCACAAGGAAGCAACAAAGT +
Preference number: 3 (lower is better)
Translates to: LQEMMNGPKRCS*HCLCFTRKQQS
Trigger: ACTTTGTTGCTTCCTTGTGAAGCAGAGACAGTGTCAAGAGCACCTTTTGGGCCCATTCATCATTTCTTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096399.8
CDS-3UTR GCA 90 bp GAATGGGCCCAAAAGGTGCTCTTGACACTGTCTCTGCTTCACAAGGAAGCAACATGGGGCCTCCCACATTaGAAGTTATACTTGAACAGC +
Preference number: 4 (lower is better)
Translates to: EWAQKVLLTLSLLHKEATWGLPH*KLYLNS
Trigger: GCTGTTCAAGTATAACTTGCAATGTGGGAGGCCCCA...TGTTGCTTCCTTGTGAAGCAGAGACAGTGTCAAGAGCACCTTTTGGGCCCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096399.8
CDS-3UTR TCA 90 bp GCTCTGTGCTCCCAGGAACCAGGAGAAGCAACTTACAACAGTCTGTATCTCTTGCACCCATCACAAACATaGAAGGAGACTGTCATACAG +
Preference number: 4 (lower is better)
Translates to: ALCSQEPGEATYNSLYLLHPSQT*KETVIQ
Trigger: CTGTATGACAGTCTCCTTTCATGTTTGTGATGGGTG...CAAGAGATACAGACTGTTGTAAGTTGCTTCTCCTGGTTCCTGGGAGCACAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188180.2
CDS-3UTR TCA 90 bp GATGAATGGGCCCAAAAGGTGCTCTTGACACTGTCTCTGCTTCACAAGGAAGCAAGAGAGCTTTGGACATaGGAAGGTGTTACTTATGTA +
Preference number: 4 (lower is better)
Translates to: DEWAQKVLLTLSLLHKEARELWT*EGVTYV
Trigger: TACATAAGTAACACCTTCTCATGTCCAAAGCTCTCT...TGCTTCCTTGTGAAGCAGAGACAGTGTCAAGAGCACCTTTTGGGCCCATTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096399.8
CDS-3UTR TCA 90 bp GCTCTGTGCTCCCAGGAACCAGGAGAAGCAACTTACAACAGTCTGTATCTCTTGAGAGAGCTTTGGACATaGGAAGGTGTTACTTATGTA +
Preference number: 4 (lower is better)
Translates to: ALCSQEPGEATYNSLYLLRELWT*EGVTYV
Trigger: TACATAAGTAACACCTTCTCATGTCCAAAGCTCTCT...CAAGAGATACAGACTGTTGTAAGTTGCTTCTCCTGGTTCCTGGGAGCACAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188180.2
CDS-3UTR CCA 90 bp GAATGGGCCCAAAAGGTGCTCTTGACACTGTCTCTGCTTCACAAGGAAGCAACACTACCTCTTCCTCTATaGAAGTTTCATCCAACAAGT +
Preference number: 4 (lower is better)
Translates to: EWAQKVLLTLSLLHKEATLPLPL*KFHPTS
Trigger: ACTTGTTGGATGAAACTTCCATAGAGGAAGAGGTAG...TGTTGCTTCCTTGTGAAGCAGAGACAGTGTCAAGAGCACCTTTTGGGCCCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096399.8
CDS-3UTR CAA 90 bp GAATGGGCCCAAAAGGTGCTCTTGACACTGTCTCTGCTTCACAAGGAAGCAACAGACACTCAGAGAGCTTaGGACATGAGAAGGTGTTAC +
Preference number: 5 (lower is better)
Translates to: EWAQKVLLTLSLLHKEATDTQRA*DMRRCY
Trigger: GTAACACCTTCTCATGTCCAAAGCTCTCTGAGTGTC...TGTTGCTTCCTTGTGAAGCAGAGACAGTGTCAAGAGCACCTTTTGGGCCCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096399.8
CDS-3UTR CAA 90 bp GCTCTGTGCTCCCAGGAACCAGGAGAAGCAACTTACAACAGTCTGTATCTCTTGGACACTCAGAGAGCTTaGGACATGAGAAGGTGTTAC +
Preference number: 5 (lower is better)
Translates to: ALCSQEPGEATYNSLYLLDTQRA*DMRRCY
Trigger: GTAACACCTTCTCATGTCCAAAGCTCTCTGAGTGTC...CAAGAGATACAGACTGTTGTAAGTTGCTTCTCCTGGTTCCTGGGAGCACAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000188180.2
CDS-3UTR CAA 90 bp GCTCTGTGCTCCCAGGAACCAGGAGAAGCAACTTACAACAGTCTGTATCTCTTGCCCCTTCTAGACTTCTaGGACACCCATCACAAACAT +
Preference number: 5 (lower is better)
Translates to: ALCSQEPGEATYNSLYLLPLLDF*DTHHKH
Trigger: ATGTTTGTGATGGGTGTCCAAGAAGTCTAGAAGGGG...CAAGAGATACAGACTGTTGTAAGTTGCTTCTCCTGGTTCCTGGGAGCACAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188180.2
CDS-3UTR CAA 90 bp CTTGACACTGTCTCTGCTTCACAAGGAAGCAACAAAGTACAAAGGTGCTTTCAAGTGGGGCCTCCCACATaGCAAGTTATACTTGAACAG +
Preference number: 5 (lower is better)
Translates to: LDTVSASQGSNKVQRCFQVGPPT*QVILEQ
Trigger: CTGTTCAAGTATAACTTGCAATGTGGGAGGCCCCAC...TTGAAAGCACCTTTGTACTTTGTTGCTTCCTTGTGAAGCAGAGACAGTGTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096399.8
CDS CAA 72 bp ATGCTGGAGAGGATTAAGGCAAAACACAGGAGGAGGTaGACCCACCCTAGACACTCAGCTCTAGCAACTACC +
Preference number: 6 (lower is better)
Translates to: MLERIKAKHRRR*THPRHSALATT
Trigger: GGTAGTTGCTAGAGCTGAGTGTCTAGGGTGGGTCAACCTCCTCCTGTGTTTTGCCTTAATCCTCTCCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096399.8
CDS TCA 72 bp GAATGTTCACACGAAAGGAGACTGTCATACAGCGTCTaGGATTCGAGGGACACTCAGAGAGCTTTGGACATG +
Preference number: 6 (lower is better)
Translates to: ECSHERRLSYSV*DSRDTQRALDM
Trigger: CATGTCCAAAGCTCTCTGAGTGTCCCTCGAATCTCAGACGCTGTATGACAGTCTCCTTTCGTGTGAACATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096399.8
CDS TCA 72 bp ACCCCTTCTAGACTTCTTGGACACCCATCACAAACATaGAAGGAGACTGTCATACAGCGTCTGAGATTCGAG +
Preference number: 6 (lower is better)
Translates to: TPSRLLGHPSQT*KETVIQRLRFE
Trigger: CTCGAATCTCAGACGCTGTATGACAGTCTCCTTTCATGTTTGTGATGGGTGTCCAAGAAGTCTAGAAGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000188180.2
CDS TCA 72 bp TCTGAGATTCGAGGGACACTCAGAGAGCTTTGGACATaGGAAGGTGTTACTTATGTAGCACTTATGGCATGT +
Preference number: 6 (lower is better)
Translates to: SEIRGTLRELWT*EGVTYVALMAC
Trigger: ACATGCCATAAGTGCTACATAAGTAACACCTTCTCATGTCCAAAGCTCTCTGAGTGTCCCTCGAATCTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096399.8
ENSMUST00000188180.2