Pregenerated sensors for GML2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068600Ensembl transcript IDs: ENSMUST00000096399.8, ENSMUST00000188180.2
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | ATTTCTTTCCTACAAGAAATGATGAATGGGCCCAAAAGGTGCTCTTaGCACTGTCTCTGCTTCACAAGGAAGCAACAAAGTACAAAGGTG | + |
Preference number: 1 (lower is better) Translates to: ISFLQEMMNGPKRCS*HCLCFTRKQQSTKV Trigger: CACCTTTGTACTTTGTTGCTTCCTTGTGAAGCAGAGACAGTGTCAAGAGCACCTTTTGGGCCCATTCATCATTTCTTGTAGGAAAGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096399.8 |
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3UTR CAA 90 bp | TATTTCTTTCCTACAAGAAATGATGAATGGGCCCAAAAGGTGCTCTaGACACTGTCTCTGCTTCACAAGGAAGCAACAAAGTACAAAGGT | + |
Preference number: 2 (lower is better) Translates to: YFFPTRNDEWAQKVL*TLSLLHKEATKYKG Trigger: ACCTTTGTACTTTGTTGCTTCCTTGTGAAGCAGAGACAGTGTCAAGAGCACCTTTTGGGCCCATTCATCATTTCTTGTAGGAAAGAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096399.8 |
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3UTR GCA 72 bp | GTCTCTGCTTCACAAGGAAGCAACAAAGTACAAAGGTaGTTTCAACTGTGGGAAGATGAGTACACCCAGAGA | + |
Preference number: 3 (lower is better) Translates to: VSASQGSNKVQR*FQLWEDEYTQR Trigger: TCTCTGGGTGTACTCATCTTCCCACAGTTGAAAGCACCTTTGTACTTTGTTGCTTCCTTGTGAAGCAGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096399.8 |
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3UTR TCA 72 bp | CTACAAGAAATGATGAATGGGCCCAAAAGGTGCTCTTaGCACTGTCTCTGCTTCACAAGGAAGCAACAAAGT | + |
Preference number: 3 (lower is better) Translates to: LQEMMNGPKRCS*HCLCFTRKQQS Trigger: ACTTTGTTGCTTCCTTGTGAAGCAGAGACAGTGTCAAGAGCACCTTTTGGGCCCATTCATCATTTCTTGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096399.8 |
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CDS-3UTR GCA 90 bp | GAATGGGCCCAAAAGGTGCTCTTGACACTGTCTCTGCTTCACAAGGAAGCAACATGGGGCCTCCCACATTaGAAGTTATACTTGAACAGC | + |
Preference number: 4 (lower is better) Translates to: EWAQKVLLTLSLLHKEATWGLPH*KLYLNS Trigger: GCTGTTCAAGTATAACTTGCAATGTGGGAGGCCCCA...TGTTGCTTCCTTGTGAAGCAGAGACAGTGTCAAGAGCACCTTTTGGGCCCATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096399.8 |
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CDS-3UTR TCA 90 bp | GCTCTGTGCTCCCAGGAACCAGGAGAAGCAACTTACAACAGTCTGTATCTCTTGCACCCATCACAAACATaGAAGGAGACTGTCATACAG | + |
Preference number: 4 (lower is better) Translates to: ALCSQEPGEATYNSLYLLHPSQT*KETVIQ Trigger: CTGTATGACAGTCTCCTTTCATGTTTGTGATGGGTG...CAAGAGATACAGACTGTTGTAAGTTGCTTCTCCTGGTTCCTGGGAGCACAGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188180.2 |
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CDS-3UTR TCA 90 bp | GATGAATGGGCCCAAAAGGTGCTCTTGACACTGTCTCTGCTTCACAAGGAAGCAAGAGAGCTTTGGACATaGGAAGGTGTTACTTATGTA | + |
Preference number: 4 (lower is better) Translates to: DEWAQKVLLTLSLLHKEARELWT*EGVTYV Trigger: TACATAAGTAACACCTTCTCATGTCCAAAGCTCTCT...TGCTTCCTTGTGAAGCAGAGACAGTGTCAAGAGCACCTTTTGGGCCCATTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096399.8 |
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CDS-3UTR TCA 90 bp | GCTCTGTGCTCCCAGGAACCAGGAGAAGCAACTTACAACAGTCTGTATCTCTTGAGAGAGCTTTGGACATaGGAAGGTGTTACTTATGTA | + |
Preference number: 4 (lower is better) Translates to: ALCSQEPGEATYNSLYLLRELWT*EGVTYV Trigger: TACATAAGTAACACCTTCTCATGTCCAAAGCTCTCT...CAAGAGATACAGACTGTTGTAAGTTGCTTCTCCTGGTTCCTGGGAGCACAGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188180.2 |
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CDS-3UTR CCA 90 bp | GAATGGGCCCAAAAGGTGCTCTTGACACTGTCTCTGCTTCACAAGGAAGCAACACTACCTCTTCCTCTATaGAAGTTTCATCCAACAAGT | + |
Preference number: 4 (lower is better) Translates to: EWAQKVLLTLSLLHKEATLPLPL*KFHPTS Trigger: ACTTGTTGGATGAAACTTCCATAGAGGAAGAGGTAG...TGTTGCTTCCTTGTGAAGCAGAGACAGTGTCAAGAGCACCTTTTGGGCCCATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096399.8 |
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CDS-3UTR CAA 90 bp | GAATGGGCCCAAAAGGTGCTCTTGACACTGTCTCTGCTTCACAAGGAAGCAACAGACACTCAGAGAGCTTaGGACATGAGAAGGTGTTAC | + |
Preference number: 5 (lower is better) Translates to: EWAQKVLLTLSLLHKEATDTQRA*DMRRCY Trigger: GTAACACCTTCTCATGTCCAAAGCTCTCTGAGTGTC...TGTTGCTTCCTTGTGAAGCAGAGACAGTGTCAAGAGCACCTTTTGGGCCCATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096399.8 |
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CDS-3UTR CAA 90 bp | GCTCTGTGCTCCCAGGAACCAGGAGAAGCAACTTACAACAGTCTGTATCTCTTGGACACTCAGAGAGCTTaGGACATGAGAAGGTGTTAC | + |
Preference number: 5 (lower is better) Translates to: ALCSQEPGEATYNSLYLLDTQRA*DMRRCY Trigger: GTAACACCTTCTCATGTCCAAAGCTCTCTGAGTGTC...CAAGAGATACAGACTGTTGTAAGTTGCTTCTCCTGGTTCCTGGGAGCACAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188180.2 |
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CDS-3UTR CAA 90 bp | GCTCTGTGCTCCCAGGAACCAGGAGAAGCAACTTACAACAGTCTGTATCTCTTGCCCCTTCTAGACTTCTaGGACACCCATCACAAACAT | + |
Preference number: 5 (lower is better) Translates to: ALCSQEPGEATYNSLYLLPLLDF*DTHHKH Trigger: ATGTTTGTGATGGGTGTCCAAGAAGTCTAGAAGGGG...CAAGAGATACAGACTGTTGTAAGTTGCTTCTCCTGGTTCCTGGGAGCACAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188180.2 |
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CDS-3UTR CAA 90 bp | CTTGACACTGTCTCTGCTTCACAAGGAAGCAACAAAGTACAAAGGTGCTTTCAAGTGGGGCCTCCCACATaGCAAGTTATACTTGAACAG | + |
Preference number: 5 (lower is better) Translates to: LDTVSASQGSNKVQRCFQVGPPT*QVILEQ Trigger: CTGTTCAAGTATAACTTGCAATGTGGGAGGCCCCAC...TTGAAAGCACCTTTGTACTTTGTTGCTTCCTTGTGAAGCAGAGACAGTGTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096399.8 |
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CDS CAA 72 bp | ATGCTGGAGAGGATTAAGGCAAAACACAGGAGGAGGTaGACCCACCCTAGACACTCAGCTCTAGCAACTACC | + |
Preference number: 6 (lower is better) Translates to: MLERIKAKHRRR*THPRHSALATT Trigger: GGTAGTTGCTAGAGCTGAGTGTCTAGGGTGGGTCAACCTCCTCCTGTGTTTTGCCTTAATCCTCTCCAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096399.8 |
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CDS TCA 72 bp | GAATGTTCACACGAAAGGAGACTGTCATACAGCGTCTaGGATTCGAGGGACACTCAGAGAGCTTTGGACATG | + |
Preference number: 6 (lower is better) Translates to: ECSHERRLSYSV*DSRDTQRALDM Trigger: CATGTCCAAAGCTCTCTGAGTGTCCCTCGAATCTCAGACGCTGTATGACAGTCTCCTTTCGTGTGAACATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096399.8 |
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CDS TCA 72 bp | ACCCCTTCTAGACTTCTTGGACACCCATCACAAACATaGAAGGAGACTGTCATACAGCGTCTGAGATTCGAG | + |
Preference number: 6 (lower is better) Translates to: TPSRLLGHPSQT*KETVIQRLRFE Trigger: CTCGAATCTCAGACGCTGTATGACAGTCTCCTTTCATGTTTGTGATGGGTGTCCAAGAAGTCTAGAAGGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188180.2 |
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CDS TCA 72 bp | TCTGAGATTCGAGGGACACTCAGAGAGCTTTGGACATaGGAAGGTGTTACTTATGTAGCACTTATGGCATGT | + |
Preference number: 6 (lower is better) Translates to: SEIRGTLRELWT*EGVTYVALMAC Trigger: ACATGCCATAAGTGCTACATAAGTAACACCTTCTCATGTCCAAAGCTCTCTGAGTGTCCCTCGAATCTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096399.8 ENSMUST00000188180.2 |