Pregenerated sensors for GMEB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038705Ensembl transcript IDs: ENSMUST00000049032.13, ENSMUST00000130475.8, ENSMUST00000141003.2, ENSMUST00000141110.8
Found 226 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAGGAGGCCAGAACTGTGTAGCCTCCGAGCAGTGGGGAGGCCGGTaGACTGGCTGGGGCAGCTTGAGGAGAGCCCTTGCCCAGGACAGT | + |
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Preference number: 1 (lower is better) Translates to: RGGQNCVASEQWGGR*TGWGSLRRALAQDS Trigger: ACTGTCCTGGGCAAGGGCTCTCCTCAAGCTGCCCCAGCCAGTTCACCGGCCTCCCCACTGCTCGGAGGCTACACAGTTCTGGCCTCCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| 3UTR GCA 90 bp | CTCCTTGGCACGGCGGCGATGTTCATCACACTGCTGCTCCAGGGCTaGCAGGTCCCGTGCATACTGTTCCCGGGAACGATCCATCTGACA | + |
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Preference number: 1 (lower is better) Translates to: LLGTAAMFITLLLQG*QVPCILFPGTIHLT Trigger: TGTCAGATGGATCGTTCCCGGGAACAGTATGCACGGGACCTGGCAGCCCTGGAGCAGCAGTGTGATGAACATCGCCGCCGTGCCAAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| 3UTR CCA 90 bp | AGCAATCTGTGCAGACTGTGTGAGCACCTGGGAAGCCATAGCAGCTaGTCCAGATGTAGCCCGGGCGAGACGGGGCCGCTTCATAGGGGA | + |
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Preference number: 1 (lower is better) Translates to: SNLCRLCEHLGSHSS*SRCSPGETGPLHRG Trigger: TCCCCTATGAAGCGGCCCCGTCTCGCCCGGGCTACATCTGGACCAGCTGCTATGGCTTCCCAGGTGCTCACACAGTCTGCACAGATTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| 3UTR TCA 90 bp | GTTGCTGTAGGCATTGTCACAATGGTGCTGCCTGCAGGTGATGCCTaGGCCACATTCTGTAGGGTGGGTCCCAGGCCAGGCAGGGTGAGC | + |
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Preference number: 1 (lower is better) Translates to: VAVGIVTMVLPAGDA*ATFCRVGPRPGRVS Trigger: GCTCACCCTGCCTGGCCTGGGACCCACCCTACAGAATGTGGCTCAGGCATCACCTGCAGGCAGCACCATTGTGACAATGCCTACAGCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| 3UTR GCA 90 bp | ACCGGGGTCAGCGTCATGAGCACATTGCTGAGGTGCTGGGACTTGTaGTTCAGCTCCTTGGCACGGCGGCGATGTTCATCACACTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: TGVSVMSTLLRCWDL*FSSLARRRCSSHCC Trigger: GCAGCAGTGTGATGAACATCGCCGCCGTGCCAAGGAGCTGAAGCACAAGTCCCAGCACCTCAGCAATGTGCTCATGACGCTGACCCCGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| 3UTR GCA 90 bp | GATGGCAATGGAACCGGGGTCAGCGTCATGAGCACATTGCTGAGGTaGTGGGACTTGTGCTTCAGCTCCTTGGCACGGCGGCGATGTTCA | + |
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Preference number: 1 (lower is better) Translates to: DGNGTGVSVMSTLLR*WDLCFSSLARRRCS Trigger: TGAACATCGCCGCCGTGCCAAGGAGCTGAAGCACAAGTCCCAGCACCTCAGCAATGTGCTCATGACGCTGACCCCGGTTCCATTGCCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| 3UTR CCA 90 bp | GGCAATGGAACCGGGGTCAGCGTCATGAGCACATTGCTGAGGTGCTaGGACTTGTGCTTCAGCTCCTTGGCACGGCGGCGATGTTCATCA | + |
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Preference number: 1 (lower is better) Translates to: GNGTGVSVMSTLLRC*DLCFSSLARRRCSS Trigger: TGATGAACATCGCCGCCGTGCCAAGGAGCTGAAGCACAAGTCCCAGCACCTCAGCAATGTGCTCATGACGCTGACCCCGGTTCCATTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| 3UTR CCA 90 bp | GGCATTCCTGGACTCAAAGCAATCTGTGCAGACTGTGTGAGCACCTaGGAAGCCATAGCAGCTGGTCCAGATGTAGCCCGGGCGAGACGG | + |
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Preference number: 1 (lower is better) Translates to: GIPGLKAICADCVST*EAIAAGPDVARARR Trigger: CCGTCTCGCCCGGGCTACATCTGGACCAGCTGCTATGGCTTCCCAGGTGCTCACACAGTCTGCACAGATTGCTTTGAGTCCAGGAATGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| 3UTR CCA 90 bp | TGCATGGCGGCTGTGCTCAAAACTGTGAGGCTGGAAGTGTCCGGATaGATCTCGACTGCGTTGGGGAAGGTAGAGCCAGAGGAGGCCAGA | + |
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Preference number: 1 (lower is better) Translates to: CMAAVLKTVRLEVSG*ISTALGKVEPEEAR Trigger: TCTGGCCTCCTCTGGCTCTACCTTCCCCAACGCAGTCGAGATCCATCCGGACACTTCCAGCCTCACAGTTTTGAGCACAGCCGCCATGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| 3UTR TCA 90 bp | AGGGCTGCCAGGTCCCGTGCATACTGTTCCCGGGAACGATCCATCTaGCACTTGTGGCTGGCCAGTACCTTCTTCACCAGATCCAGCATG | + |
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Preference number: 1 (lower is better) Translates to: RAARSRAYCSRERSI*HLWLASTFFTRSSM Trigger: CATGCTGGATCTGGTGAAGAAGGTACTGGCCAGCCACAAGTGTCAGATGGATCGTTCCCGGGAACAGTATGCACGGGACCTGGCAGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| 3UTR GCA 90 bp | AGCAGCTGCAAGGGGCTGACTACCTTCAGTACTGTGCTGCCATCCTaGATGGCGGCTGTGCTCAAAACTGTGAGGCTGGAAGTGTCCGGA | + |
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Preference number: 1 (lower is better) Translates to: SSCKGLTTFSTVLPS*MAAVLKTVRLEVSG Trigger: TCCGGACACTTCCAGCCTCACAGTTTTGAGCACAGCCGCCATGCAGGATGGCAGCACAGTACTGAAGGTAGTCAGCCCCTTGCAGCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| 3UTR CCA 90 bp | TGGTGCTGGCTCTGTAGCTGTACCAGAAGCACCCAGGCCTCCTCCTaGTCAGTGACCCTCTGGTTCCTGCTCAAGGCCCAATGTGTAAAC | + |
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Preference number: 1 (lower is better) Translates to: WCWLCSCTRSTQASS*SVTLWFLLKAQCVN Trigger: GTTTACACATTGGGCCTTGAGCAGGAACCAGAGGGTCACTGACCAGGAGGAGGCCTGGGTGCTTCTGGTACAGCTACAGAGCCAGCACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| 3UTR GCA 90 bp | TGTGCTCAAAACTGTGAGGCTGGAAGTGTCCGGATGGATCTCGACTaGGTTGGGGAAGGTAGAGCCAGAGGAGGCCAGAACTGTGTAGCC | + |
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Preference number: 1 (lower is better) Translates to: CAQNCEAGSVRMDLD*VGEGRARGGQNCVA Trigger: GGCTACACAGTTCTGGCCTCCTCTGGCTCTACCTTCCCCAACGCAGTCGAGATCCATCCGGACACTTCCAGCCTCACAGTTTTGAGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| 3UTR CCA 90 bp | CAGCCTTACATACCCCGGAGCTCTCAGGATAGAGACACTGAGTATTaGCCAGAGAGGCCTAGCTCCACCTCCAGGAGAGGGAGAGATTGG | + |
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Preference number: 1 (lower is better) Translates to: QPYIPRSSQDRDTEY*PERPSSTSRRGRDW Trigger: CCAATCTCTCCCTCTCCTGGAGGTGGAGCTAGGCCTCTCTGGCCAATACTCAGTGTCTCTATCCTGAGAGCTCCGGGGTATGTAAGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| 3UTR GCA 90 bp | GGTGGGGCAGTGATAACACTTCCTCTCCCAGAACTGAGGGTTCCATaGAGACGGGACTATTGGTCCTTCTCTGTCCTGCTAGAAGCTGCC | + |
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Preference number: 1 (lower is better) Translates to: GGAVITLPLPELRVP*RRDYWSFSVLLEAA Trigger: GGCAGCTTCTAGCAGGACAGAGAAGGACCAATAGTCCCGTCTGCATGGAACCCTCAGTTCTGGGAGAGGAAGTGTTATCACTGCCCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| 3UTR GCA 90 bp | TGCTCATGGTCCTCTGCTACAGCAGCCACCTCAATAGTGGCCGTGTaGTCCTCAGGTCCAGTGGCAGTTGCTGTAGGCATTGTCACAATG | + |
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Preference number: 1 (lower is better) Translates to: CSWSSATAATSIVAV*SSGPVAVAVGIVTM Trigger: CATTGTGACAATGCCTACAGCAACTGCCACTGGACCTGAGGAGCACACGGCCACTATTGAGGTGGCTGCTGTAGCAGAGGACCATGAGCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| 3UTR CCA 90 bp | ACACTTCCTCTCCCAGAACTGAGGGTTCCATGCAGACGGGACTATTaGTCCTTCTCTGTCCTGCTAGAAGCTGCCTTGGAGGGTAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: TLPLPELRVPCRRDY*SFSVLLEAALEGRL Trigger: CAGCCTACCCTCCAAGGCAGCTTCTAGCAGGACAGAGAAGGACCAATAGTCCCGTCTGCATGGAACCCTCAGTTCTGGGAGAGGAAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| 3UTR CCA 90 bp | CTTGCCCAGGACAGTGGAGGGCAGTGTAGATACTACTTTGCCCAGTaGCACACTGGTCAACTGGGACACAGGCATTCCTGGACTCAAAGC | + |
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Preference number: 1 (lower is better) Translates to: LAQDSGGQCRYYFAQ*HTGQLGHRHSWTQS Trigger: GCTTTGAGTCCAGGAATGCCTGTGTCCCAGTTGACCAGTGTGCCACTGGGCAAAGTAGTATCTACACTGCCCTCCACTGTCCTGGGCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| 3UTR GCA 90 bp | ACTGGTCAACTGGGACACAGGCATTCCTGGACTCAAAGCAATCTGTaGAGACTGTGTGAGCACCTGGGAAGCCATAGCAGCTGGTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: TGQLGHRHSWTQSNL*RLCEHLGSHSSWSR Trigger: TCTGGACCAGCTGCTATGGCTTCCCAGGTGCTCACACAGTCTGCACAGATTGCTTTGAGTCCAGGAATGCCTGTGTCCCAGTTGACCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| 3UTR CCA 90 bp | GGTCTGCATTTATCCCCAGGGCATGTTCCCACCAGCGAAGGAACATaGACACTGGCCATACTGAACCAACAGAGAACTGTGGGAAGAGAC | + |
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Preference number: 1 (lower is better) Translates to: GLHLSPGHVPTSEGT*TLAILNQQRTVGRD Trigger: GTCTCTTCCCACAGTTCTCTGTTGGTTCAGTATGGCCAGTGTCCATGTTCCTTCGCTGGTGGGAACATGCCCTGGGGATAAATGCAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| 3UTR CCA 90 bp | CACAAGCACCCGTGTTTGCATGTGGAGGGGGAAGACCTTCCTTCCTaGGTCCTAAATGGCCCAACAAGCAGGGAACACAGCAATAGAAGT | + |
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Preference number: 1 (lower is better) Translates to: HKHPCLHVEGEDLPS*VLNGPTSREHSNRS Trigger: ACTTCTATTGCTGTGTTCCCTGCTTGTTGGGCCATTTAGGACCCAGGAAGGAAGGTCTTCCCCCTCCACATGCAAACACGGGTGCTTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| 3UTR CCA 90 bp | CCCGTGCATACTGTTCCCGGGAACGATCCATCTGACACTTGTGGCTaGCCAGTACCTTCTTCACCAGATCCAGCATGCCAAAGTTTTGCA | + |
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Preference number: 1 (lower is better) Translates to: PVHTVPGNDPSDTCG*PVPSSPDPACQSFA Trigger: TGCAAAACTTTGGCATGCTGGATCTGGTGAAGAAGGTACTGGCCAGCCACAAGTGTCAGATGGATCGTTCCCGGGAACAGTATGCACGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| 3UTR GCA 90 bp | GGAAGAGACCAAATCCATAGGATCTATGGCTTCCACACTCAGGCATaGTGCCTAAGACATGTGTCAATAATGTCCCAGCAGGCTCAGCCC | + |
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Preference number: 1 (lower is better) Translates to: GRDQIHRIYGFHTQA*CLRHVSIMSQQAQP Trigger: GGGCTGAGCCTGCTGGGACATTATTGACACATGTCTTAGGCAGCATGCCTGAGTGTGGAAGCCATAGATCCTATGGATTTGGTCTCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| 3UTR TCA 90 bp | CTAAAGACAGCCTTCCATGGAACATTTTGGATCCTGTCTTCCAGCTaGCCAACCCACCACTCTAAACAGCCTTACATACCCCGGAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: LKTAFHGTFWILSSS*PTHHSKQPYIPRSS Trigger: AGAGCTCCGGGGTATGTAAGGCTGTTTAGAGTGGTGGGTTGGTCAGCTGGAAGACAGGATCCAAAATGTTCCATGGAAGGCTGTCTTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| 3UTR TCA 90 bp | AGTGGCCCTTCCTGCTGTGGGGCCCTTGAAAGGAAAGCCTTCAATTaGCAGAACAGGAGATTCAAGAGACAACTTAGGACTATCCCAGGA | + |
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Preference number: 1 (lower is better) Translates to: SGPSCCGALERKAFN*QNRRFKRQLRTIPG Trigger: TCCTGGGATAGTCCTAAGTTGTCTCTTGAATCTCCTGTTCTGTCAATTGAAGGCTTTCCTTTCAAGGGCCCCACAGCAGGAAGGGCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| 3UTR TCA 90 bp | GATGTATTCTGTGGATGTAGGACTGCTCAGGGATACACGTGCCCCTaGAAGGTCAATCTTCGTGCTGCGGCAAGTATTAGAGCAGACCTT | + |
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Preference number: 1 (lower is better) Translates to: DVFCGCRTAQGYTCP*KVNLRAAASIRADL Trigger: AAGGTCTGCTCTAATACTTGCCGCAGCACGAAGATTGACCTTTCAGGGGCACGTGTATCCCTGAGCAGTCCTACATCCACAGAATACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141003.2 ENSMUST00000141110.8 |
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| 3UTR GCA 90 bp | AGAGACCAAATCCATAGGATCTATGGCTTCCACACTCAGGCATGCTaGCTAAGACATGTGTCAATAATGTCCCAGCAGGCTCAGCCCCAT | + |
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Preference number: 1 (lower is better) Translates to: RDQIHRIYGFHTQAC*LRHVSIMSQQAQPH Trigger: ATGGGGCTGAGCCTGCTGGGACATTATTGACACATGTCTTAGGCAGCATGCCTGAGTGTGGAAGCCATAGATCCTATGGATTTGGTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| 3UTR TCA 90 bp | GCAGGCCTTTCATGGTTTCCTCTAGCTCCTGTTGAAATTCCTGTATaGCTTCATCCAGTAAGCCCGCATCCTTTAATCCCCGCCAGAATG | + |
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Preference number: 1 (lower is better) Translates to: AGLSWFPLAPVEIPV*LHPVSPHPLIPARM Trigger: CATTCTGGCGGGGATTAAAGGATGCGGGCTTACTGGATGAAGTCATACAGGAATTTCAACAGGAGCTAGAGGAAACCATGAAAGGCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| 3UTR CCA 90 bp | AGAGCTTTGTCTCAGGGAAAGACACTACTTAAGACCTCTAGCACCTaGCTAGGTGTGTATATATTGGTGCCCTGGGTCCCTCCTAGAACT | + |
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Preference number: 1 (lower is better) Translates to: RALSQGKTLLKTSST*LGVYILVPWVPPRT Trigger: AGTTCTAGGAGGGACCCAGGGCACCAATATATACACACCTAGCCAGGTGCTAGAGGTCTTAAGTAGTGTCTTTCCCTGAGACAAAGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| 3UTR TCA 90 bp | TGGTTCCTAGGGCAGGAAGGTTTTATTTGTGACATTAATCTAGTCTaGGCTTGTAGAGCAGGGACTTCAAGGAAGTACCCACCCTGCTGG | + |
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Preference number: 1 (lower is better) Translates to: WFLGQEGFICDINLV*ACRAGTSRKYPPCW Trigger: CCAGCAGGGTGGGTACTTCCTTGAAGTCCCTGCTCTACAAGCTCAGACTAGATTAATGTCACAAATAAAACCTTCCTGCCCTAGGAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| 3UTR GCA 90 bp | ATACTTGCTAAACACATACAAAGTAGAACTCAAAGAACTCAAACTTaGCCTTCTGCGTGCCTCCTGGGCAGGCATGGAAAGGAGCTTGCA | + |
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Preference number: 1 (lower is better) Translates to: ILAKHIQSRTQRTQT*PSACLLGRHGKELA Trigger: TGCAAGCTCCTTTCCATGCCTGCCCAGGAGGCACGCAGAAGGGCAAGTTTGAGTTCTTTGAGTTCTACTTTGTATGTGTTTAGCAAGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| 3UTR TCA 90 bp | GAGGATACTGGGAAGGAGTGCTATGAACTAATTCTGAAGCTGATTTaGGAATTATTTTCGTATGGCTCTGAAATAAATTTCACCTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: EDTGKECYELILKLI*ELFSYGSEINFTFQ Trigger: CTGGAAGGTGAAATTTATTTCAGAGCCATACGAAAATAATTCTCAAATCAGCTTCAGAATTAGTTCATAGCACTCCTTCCCAGTATCCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| 3UTR-3UTR TCA 90 bp | TCCGGATGGATCTCGACTGCGTTGGGGAAGGTAGAGCCAGAGGAGGCCAGAACTCTGGCTGGGGCAGCTTaGGGAGAGCCCTTGCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: SGWISTALGKVEPEEARTLAGAA*GEPLPR Trigger: CCTGGGCAAGGGCTCTCCTCAAGCTGCCCCAGCCAG...AGTTCTGGCCTCCTCTGGCTCTACCTTCCCCAACGCAGTCGAGATCCATCCGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| 3UTR-3UTR GCA 90 bp | CACCTGGGAAGCCATAGCAGCTGGTCCAGATGTAGCCCGGGCGAGACGGGGCCGGATTTCCCTGCCAGGTaGACAAACTCCTTTGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: HLGSHSSWSRCSPGETGPDFPAR*TNSFGL Trigger: CAGCCCAAAGGAGTTTGTGCACCTGGCAGGGAAATC...CGGCCCCGTCTCGCCCGGGCTACATCTGGACCAGCTGCTATGGCTTCCCAGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGATGTAGCCCGGGCGAGACGGGGCCGCTTCATAGGGGATGGCAATGGAACCCGATGTTCATCACACTaGTGCTCCAGGGCTGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: PDVARARRGRFIGDGNGTRCSSH*CSRAAR Trigger: CCTGGCAGCCCTGGAGCAGCAGTGTGATGAACATCG...GGTTCCATTGCCATCCCCTATGAAGCGGCCCCGTCTCGCCCGGGCTACATCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCGCTTCATAGGGGATGGCAATGGAACCGGGGTCAGCGTCATGAGCACATTGTCGGAGCTGCAGGGGTaGGTCCTGCACTCGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: GRFIGDGNGTGVSVMSTLSELQG*VLHSLL Trigger: CAGCAGCGAGTGCAGGACCCACCCCTGCAGCTCCGA...CAATGTGCTCATGACGCTGACCCCGGTTCCATTGCCATCCCCTATGAAGCGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| 3UTR-3UTR TCA 90 bp | CACCTGGGAAGCCATAGCAGCTGGTCCAGATGTAGCCCGGGCGAGACGGGGCCGTTTGCACGATGTTGTTaGGGAGGACAGCATCTCGGA | + |
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Preference number: 2 (lower is better) Translates to: HLGSHSSWSRCSPGETGPFARCC*GGQHLG Trigger: TCCGAGATGCTGTCCTCCTCAACAACATCGTGCAAA...CGGCCCCGTCTCGCCCGGGCTACATCTGGACCAGCTGCTATGGCTTCCCAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| 3UTR CAA 90 bp | GGAACCGGGGTCAGCGTCATGAGCACATTGCTGAGGTGCTGGGACTaGTGCTTCAGCTCCTTGGCACGGCGGCGATGTTCATCACACTGC | + |
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Preference number: 2 (lower is better) Translates to: GTGVSVMSTLLRCWD*CFSSLARRRCSSHC Trigger: GCAGTGTGATGAACATCGCCGCCGTGCCAAGGAGCTGAAGCACAAGTCCCAGCACCTCAGCAATGTGCTCATGACGCTGACCCCGGTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| 3UTR-3UTR GCA 90 bp | GCCTTCAAAGCAGTGAAATGGGACAGTGGCCCTTCCTGCTGTGGGGCCCTTGAACCTTCACCACCTGAGTaGCTGTGGGGTGGGGATGGG | + |
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Preference number: 2 (lower is better) Translates to: AFKAVKWDSGPSCCGALEPSPPE*LWGGDG Trigger: CCCATCCCCACCCCACAGGCACTCAGGTGGTGAAGG...TTCAAGGGCCCCACAGCAGGAAGGGCCACTGTCCCATTTCACTGCTTTGAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| 3UTR-3UTR TCA 90 bp | GGCCGCTTCATAGGGGATGGCAATGGAACCGGGGTCAGCGTCATGAGCACATTGCGGGAACGATCCATCTaGCACTTGTGGCTGGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: GRFIGDGNGTGVSVMSTLRERSI*HLWLAS Trigger: ACTGGCCAGCCACAAGTGTCAGATGGATCGTTCCCG...CAATGTGCTCATGACGCTGACCCCGGTTCCATTGCCATCCCCTATGAAGCGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| 3UTR-3UTR GCA 90 bp | GGCCGCTTCATAGGGGATGGCAATGGAACCGGGGTCAGCGTCATGAGCACATTGAGGTGCTGGGACTTGTaGTTCAGCTCCTTGGCACGG | + |
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Preference number: 2 (lower is better) Translates to: GRFIGDGNGTGVSVMSTLRCWDL*FSSLAR Trigger: CCGTGCCAAGGAGCTGAAGCACAAGTCCCAGCACCT...CAATGTGCTCATGACGCTGACCCCGGTTCCATTGCCATCCCCTATGAAGCGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCATAGCAGCTGGTCCAGATGTAGCCCGGGCGAGACGGGGCCGCTTCATAGGCACATCAGCTGCAGCTaGTGTGAGTGGGATGTATTC | + |
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Preference number: 2 (lower is better) Translates to: SHSSWSRCSPGETGPLHRHISCS*CEWDVF Trigger: GAATACATCCCACTCACACCAGCTGCAGCTGATGTG...CCTATGAAGCGGCCCCGTCTCGCCCGGGCTACATCTGGACCAGCTGCTATGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| 3UTR-3UTR TCA 90 bp | CACCTGGGAAGCCATAGCAGCTGGTCCAGATGTAGCCCGGGCGAGACGGGGCCGTCCTCTAGCTCCTGTTaGAATTCCTGTATGACTTCA | + |
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Preference number: 2 (lower is better) Translates to: HLGSHSSWSRCSPGETGPSSSSC*NSCMTS Trigger: TGAAGTCATACAGGAATTTCAACAGGAGCTAGAGGA...CGGCCCCGTCTCGCCCGGGCTACATCTGGACCAGCTGCTATGGCTTCCCAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCATAGCAGCTGGTCCAGATGTAGCCCGGGCGAGACGGGGCCGCTTCATAGGCAAGGTAGATTTCCCTaGCAGGTGCACAAACTCCTT | + |
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Preference number: 2 (lower is better) Translates to: SHSSWSRCSPGETGPLHRQGRFP*QVHKLL Trigger: AAGGAGTTTGTGCACCTGGCAGGGAAATCTACCTTG...CCTATGAAGCGGCCCCGTCTCGCCCGGGCTACATCTGGACCAGCTGCTATGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGTGAGCAGCTGCAAGGGGCTGACTACCTTCAGTACTGTGCTGCCATCCTGCTCCTGCACTCGCTGCTaGAGGCCTTTCATGGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: RVSSCKGLTTFSTVLPSCSCTRC*RPFMVS Trigger: GGAAACCATGAAAGGCCTGCAGCAGCGAGTGCAGGA...GCAGGATGGCAGCACAGTACTGAAGGTAGTCAGCCCCTTGCAGCTGCTCACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTGTGCTCAAAACTGTGAGGCTGGAAGTGTCCGGATGGATCTCGACTGCGTTCTTGAGGAGAGCCCTTaGCCAGGACAGTGGAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: GCAQNCEAGSVRMDLDCVLEESP*PGQWRA Trigger: TGCCCTCCACTGTCCTGGGCAAGGGCTCTCCTCAAG...AACGCAGTCGAGATCCATCCGGACACTTCCAGCCTCACAGTTTTGAGCACAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCAGGGACTTCAAGGAAGTACCCACCCTGCTGGTCCTCCCAATGCCCCTAAAAGAACCTCAGTAGCATaGCATGGGGTGAGAGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: EQGLQGSTHPAGPPNAPKRTSVA*HGVRAG Trigger: CCCTGCTCTCACCCCATGTCATGCTACTGAGGTTCT...TTTAGGGGCATTGGGAGGACCAGCAGGGTGGGTACTTCCTTGAAGTCCCTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR-3UTR TCA 90 bp | GAGGGGGAAGACCTTCCTTCCTGGGTCCTAAATGGCCCAACAAGCAGGGAACACGCTGTAGACAGCCTCTaGGGATACTGGGAAGGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: EGEDLPSWVLNGPTSREHAVDSL*GYWEGV Trigger: CACTCCTTCCCAGTATCCTCAGAGGCTGTCTACAGC...GTGTTCCCTGCTTGTTGGGCCATTTAGGACCCAGGAAGGAAGGTCTTCCCCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR-3UTR TCA 90 bp | ACTGTGAGGCTGGAAGTGTCCGGATGGATCTCGACTGCGTTGGGGAAGGTAGAGCAGCTGCAGCTGGTGTaGGTGGGATGTATTCTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: TVRLEVSGWISTALGKVEQLQLV*VGCILW Trigger: CCACAGAATACATCCCACTCACACCAGCTGCAGCTG...CTCTACCTTCCCCAACGCAGTCGAGATCCATCCGGACACTTCCAGCCTCACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAGACCTTCCTTCCTGGGTCCTAAATGGCCCAACAAGCAGGGAACACAGCAATGTAGTGGCCTCTGCCTaGAGTGGCCTGAGGAGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: EDLPSWVLNGPTSREHSNVVASA*SGLRRG Trigger: GCCTCTCCTCAGGCCACTGCAGGCAGAGGCCACTAC...ATTGCTGTGTTCCCTGCTTGTTGGGCCATTTAGGACCCAGGAAGGAAGGTCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR-3UTR GCA 90 bp | AGAGCCCTTGCCCAGGACAGTGGAGGGCAGTGTAGATACTACTTTGCCCAGTGGGCCATTCACATCAGCTaGAGCTGGTGTGAGTGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: RALAQDSGGQCRYYFAQWAIHIS*SWCEWD Trigger: ATCCCACTCACACCAGCTGCAGCTGATGTGAATGGC...CCACTGGGCAAAGTAGTATCTACACTGCCCTCCACTGTCCTGGGCAAGGGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCCGCTTCATAGGGGATGGCAATGGAACCGGGGTCAGCGTCATGAGCACATTGTCTGACACTTGTGGCTaGCCAGTACCTTCTTCACCA | + |
|
Preference number: 2 (lower is better) Translates to: GRFIGDGNGTGVSVMSTLSDTCG*PVPSSP Trigger: TGGTGAAGAAGGTACTGGCCAGCCACAAGTGTCAGA...CAATGTGCTCATGACGCTGACCCCGGTTCCATTGCCATCCCCTATGAAGCGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR CAA 90 bp | AGTACCTTCTTCACCAGATCCAGCATGCCAAAGTTTTGCACGATGTaGTTGAGGAGGACAGCATCTCGGAGCTGCAGGGGTGGGTCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: STFFTRSSMPKFCTM*LRRTASRSCRGGSC Trigger: GCAGGACCCACCCCTGCAGCTCCGAGATGCTGTCCTCCTCAACAACATCGTGCAAAACTTTGGCATGCTGGATCTGGTGAAGAAGGTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGGCCATACTGAACCAACAGAGAACTGTGGGAAGAGACCAAATCCATAGGATCGTCCGTAGTGGCCTCTaGCTGCAGTGGCCTGAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: LAILNQQRTVGRDQIHRIVRSGL*LQWPEE Trigger: CTCCTCAGGCCACTGCAGGCAGAGGCCACTACGGAC...GATCCTATGGATTTGGTCTCTTCCCACAGTTCTCTGTTGGTTCAGTATGGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR-3UTR GCA 90 bp | GGTCAACTGGGACACAGGCATTCCTGGACTCAAAGCAATCTGTGCAGACTGTGTTGTTCATCACACTGCTaGTCCAGGGCTGCCAGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: GQLGHRHSWTQSNLCRLCCSSHC*SRAARS Trigger: GGACCTGGCAGCCCTGGAGCAGCAGTGTGATGAACA...ACACAGTCTGCACAGATTGCTTTGAGTCCAGGAATGCCTGTGTCCCAGTTGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGCATGGCGGCTGTGCTCAAAACTGTGAGGCTGGAAGTGTCCGGATGGATCTCGCTGCAGGCCTTTCATaGTTTCCTCTAGCTCCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: LHGGCAQNCEAGSVRMDLAAGLS*FPLAPV Trigger: AACAGGAGCTAGAGGAAACCATGAAAGGCCTGCAGC...GAGATCCATCCGGACACTTCCAGCCTCACAGTTTTGAGCACAGCCGCCATGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCTGTGCTCAAAACTGTGAGGCTGGAAGTGTCCGGATGGATCTCGACTGCGTTACATTGCTGAGGTGCTaGGACTTGTGCTTCAGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: GCAQNCEAGSVRMDLDCVTLLRC*DLCFSS Trigger: GGAGCTGAAGCACAAGTCCCAGCACCTCAGCAATGT...AACGCAGTCGAGATCCATCCGGACACTTCCAGCCTCACAGTTTTGAGCACAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR CAA 90 bp | ATTCTGCCCCCTTTTCTTCTCTTGATTCATCCGGCAATCCTCTCTTaGGTTCAGCCCATCAGACCTGCTTGTGCTGAGCCAGCCCTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: ILPPFLLLIHPAILS*VQPIRPACAEPALW Trigger: CCACAGGGCTGGCTCAGCACAAGCAGGTCTGATGGGCTGAACCAAAGAGAGGATTGCCGGATGAATCAAGAGAAGAAAAGGGGGCAGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR-3UTR TCA 90 bp | TCCGGATGGATCTCGACTGCGTTGGGGAAGGTAGAGCCAGAGGAGGCCAGAACTGTTGAAATTCCTGTATaGCTTCATCCAGTAAGCCCG | + |
|
Preference number: 2 (lower is better) Translates to: SGWISTALGKVEPEEARTVEIPV*LHPVSP Trigger: CGGGCTTACTGGATGAAGTCATACAGGAATTTCAAC...AGTTCTGGCCTCCTCTGGCTCTACCTTCCCCAACGCAGTCGAGATCCATCCGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR-3UTR GCA 90 bp | GTACTAACAGGTGGTGGGGCAGTGATAACACTTCCTCTCCCAGAACTGAGGGTTTTAGCTGGGCTCTGGTaGTGGCTCTGTAGCTGTACC | + |
|
Preference number: 2 (lower is better) Translates to: VLTGGGAVITLPLPELRVLAGLW*WLCSCT Trigger: GGTACAGCTACAGAGCCAGCACCAGAGCCCAGCTAA...AACCCTCAGTTCTGGGAGAGGAAGTGTTATCACTGCCCCACCACCTGTTAGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR-3UTR GCA 90 bp | GATGGCAATGGAACCGGGGTCAGCGTCATGAGCACATTGCTGAGGTGCTGGGACAGCATGCCAAAGTTTTaGACGATGTTGTTGAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: DGNGTGVSVMSTLLRCWDSMPKF*TMLLRR Trigger: CCTCCTCAACAACATCGTGCAAAACTTTGGCATGCT...GTCCCAGCACCTCAGCAATGTGCTCATGACGCTGACCCCGGTTCCATTGCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTGGCCCACATCCCCCAAAGCAAATGACATCTGGGGCTTGTGCCAAGGAAAGAGCAGCCAGCCCATCTTaGAAGGATTTTACCCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: TGPHPPKQMTSGACAKERAASPS*KDFTLP Trigger: AGGGAGGGTAAAATCCTTCCAAGATGGGCTGGCTGC...TCTTTCCTTGGCACAAGCCCCAGATGTCATTTGCTTTGGGGGATGTGGGCCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR-3UTR CCA 90 bp | GTGCCTCCTGGGCAGGCATGGAAAGGAGCTTGCACCCTCTGCAAAACCAAATCCGATTTTCCAGGTTGCTaGCAACATTCTGCCCCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: VPPGQAWKGACTLCKTKSDFPGC*QHSAPF Trigger: AAAGGGGGCAGAATGTTGCCAGCAACCTGGAAAATC...GGATTTGGTTTTGCAGAGGGTGCAAGCTCCTTTCCATGCCTGCCCAGGAGGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR-3UTR TCA 90 bp | AACACTTCCTCTCCCAGAACTGAGGGTTCCATGCAGACGGGACTATTGGTCCTTCTGCTGTGGGGCCCTTaGAAGGAAAGCCTTCAATTG | + |
|
Preference number: 2 (lower is better) Translates to: NTSSPRTEGSMQTGLLVLLLWGP*KESLQL Trigger: CAATTGAAGGCTTTCCTTTCAAGGGCCCCACAGCAG...AAGGACCAATAGTCCCGTCTGCATGGAACCCTCAGTTCTGGGAGAGGAAGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR-3UTR TCA 90 bp | AACACTTCCTCTCCCAGAACTGAGGGTTCCATGCAGACGGGACTATTGGTCCTTGATTCGTGGCCACAGTaGACAGTGATGGAACAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: NTSSPRTEGSMQTGLLVLDSWPQ*TVMEQR Trigger: CCTCTGTTCCATCACTGTTCACTGTGGCCACGAATC...AAGGACCAATAGTCCCGTCTGCATGGAACCCTCAGTTCTGGGAGAGGAAGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR-3UTR TCA 90 bp | CTGCATGGCGGCTGTGCTCAAAACTGTGAGGCTGGAAGTGTCCGGATGGATCTCGAACACATTTCACATTaGTGCCAGGGCACACAAACT | + |
|
Preference number: 2 (lower is better) Translates to: LHGGCAQNCEAGSVRMDLEHISH*CQGTQT Trigger: AGTTTGTGTGCCCTGGCATCAATGTGAAATGTGTTC...GAGATCCATCCGGACACTTCCAGCCTCACAGTTTTGAGCACAGCCGCCATGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGATCTATGGCTTCCACACTCAGGCATGCTGCCTAAGACATGTGTCAATAATGACCCAGGCCTCCTCCTaGTCAGTGACCCTCTGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: RIYGFHTQACCLRHVSIMTQASS*SVTLWF Trigger: GAACCAGAGGGTCACTGACCAGGAGGAGGCCTGGGT...CATTATTGACACATGTCTTAGGCAGCATGCCTGAGTGTGGAAGCCATAGATCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR-3UTR CCA 90 bp | GTGCCTCCTGGGCAGGCATGGAAAGGAGCTTGCACCCTCTGCAAAACCAAATCCAAAGCAAATGACATCTaGGGCTTGTGCCAAGGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: VPPGQAWKGACTLCKTKSKANDI*GLCQGK Trigger: CTTTCCTTGGCACAAGCCCCAGATGTCATTTGCTTT...GGATTTGGTTTTGCAGAGGGTGCAAGCTCCTTTCCATGCCTGCCCAGGAGGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR-3UTR TCA 90 bp | GAAGACCTTCCTTCCTGGGTCCTAAATGGCCCAACAAGCAGGGAACACAGCAATGGCCACAGTGAACAGTaGTGGAACAGAGGGAAAACA | + |
|
Preference number: 2 (lower is better) Translates to: EDLPSWVLNGPTSREHSNGHSEQ*WNRGKT Trigger: TGTTTTCCCTCTGTTCCATCACTGTTCACTGTGGCC...ATTGCTGTGTTCCCTGCTTGTTGGGCCATTTAGGACCCAGGAAGGAAGGTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR-3UTR GCA 90 bp | GTACTAACAGGTGGTGGGGCAGTGATAACACTTCCTCTCCCAGAACTGAGGGTTATAGGGGAGTACAAGTaGCAGCTGCACACAGAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: VLTGGGAVITLPLPELRVIGEYK*QLHTES Trigger: ACTCTCTGTGTGCAGCTGGCACTTGTACTCCCCTAT...AACCCTCAGTTCTGGGAGAGGAAGTGTTATCACTGCCCCACCACCTGTTAGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR-3UTR CCA 90 bp | AACACTTCCTCTCCCAGAACTGAGGGTTCCATGCAGACGGGACTATTGGTCCTTTTCAAAGCAGTGAAATaGGACAGTGGCCCTTCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: NTSSPRTEGSMQTGLLVLFKAVK*DSGPSC Trigger: GCAGGAAGGGCCACTGTCCCATTTCACTGCTTTGAA...AAGGACCAATAGTCCCGTCTGCATGGAACCCTCAGTTCTGGGAGAGGAAGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR-3UTR CCA 90 bp | CAAAACTGTGAGGCTGGAAGTGTCCGGATGGATCTCGACTGCGTTGGGGAAGGTGTGCACAAACTCCTTTaGGCTGATCACATGTTCATC | + |
|
Preference number: 2 (lower is better) Translates to: QNCEAGSVRMDLDCVGEGVHKLL*ADHMFI Trigger: GATGAACATGTGATCAGCCCAAAGGAGTTTGTGCAC...ACCTTCCCCAACGCAGTCGAGATCCATCCGGACACTTCCAGCCTCACAGTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGGTTGTGGTCCAGTCACCAGGGTCCTCACAGGTCTCTATGGTGATGGTGGCACAAACTCCTTTGGGCTaGTCACATGTTCATCATACT | + |
|
Preference number: 2 (lower is better) Translates to: MVVVQSPGSSQVSMVMVAQTPLG*SHVHHT Trigger: AGTATGATGAACATGTGATCAGCCCAAAGGAGTTTG...TGCCACCATCACCATAGAGACCTGTGAGGACCCTGGTGACTGGACCACAACCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGGGATGCATGGATGGAAGGACAAGGTAGCCTTCAAAGCAGTGAAATGGGACTATATATTGGTGCCCTaGGTCCCTCCTAGAACTGAC | + |
|
Preference number: 2 (lower is better) Translates to: EGMHGWKDKVAFKAVKWDYILVP*VPPRTD Trigger: GTCAGTTCTAGGAGGGACCCAGGGCACCAATATATA...GTCCCATTTCACTGCTTTGAAGGCTACCTTGTCCTTCCATCCATGCATCCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR-3UTR TCA 90 bp | CTTGCTAAACACATACAAAGTAGAACTCAAAGAACTCAAACTTGCCCTTCTGCGCCTCCTCCTGGTCAGTaGCCCTCTGGTTCCTGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: LAKHIQSRTQRTQTCPSAPPPGQ*PSGSCS Trigger: TGAGCAGGAACCAGAGGGTCACTGACCAGGAGGAGG...CGCAGAAGGGCAAGTTTGAGTTCTTTGAGTTCTACTTTGTATGTGTTTAGCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR-3UTR CCA 90 bp | TCTAAGGGGCAAGGGCCAAAAATGTTTCAACCTTGCTCTTATGAAGAAAGGGAAAGTGAAATGGGACAGTaGCCCTTCCTGCTGTGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: SKGQGPKMFQPCSYEERESEMGQ*PFLLWG Trigger: GCCCCACAGCAGGAAGGGCCACTGTCCCATTTCACT...TTCCCTTTCTTCATAAGAGCAAGGTTGAAACATTTTTGGCCCTTGCCCCTTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR-3UTR TCA 90 bp | GAGGGGATGCATGGATGGAAGGACAAGGTAGCCTTCAAAGCAGTGAAATGGGACAGGAAAGCCTTCAATTaGCAGAACAGGAGATTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: EGMHGWKDKVAFKAVKWDRKAFN*QNRRFK Trigger: CTTGAATCTCCTGTTCTGTCAATTGAAGGCTTTCCT...GTCCCATTTCACTGCTTTGAAGGCTACCTTGTCCTTCCATCCATGCATCCCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR-3UTR TCA 90 bp | TCCAGTAAGCCCGCATCCTTTAATCCCCGCCAGAATGCAAATGTGTCATCTCCAATACTGACCCTCACCTaGACACATTTCACATTGATG | + |
|
Preference number: 2 (lower is better) Translates to: SSKPASFNPRQNANVSSPILTLT*THFTLM Trigger: CATCAATGTGAAATGTGTTCAGGTGAGGGTCAGTAT...TGGAGATGACACATTTGCATTCTGGCGGGGATTAAAGGATGCGGGCTTACTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR CAA 90 bp | AACTTAGGACTATCCCAGGACATCCTTTACCAAGAGGCCAAAACTTaGTTCCCTGAATTGTTTGGCTCCAAAAACTCTTGCCTAGGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: NLGLSQDILYQEAKT*FPELFGSKNSCLGS Trigger: GCTACCTAGGCAAGAGTTTTTGGAGCCAAACAATTCAGGGAACAAAGTTTTGGCCTCTTGGTAAAGGATGTCCTGGGATAGTCCTAAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR-3UTR TCA 90 bp | TCTAAGGGGCAAGGGCCAAAAATGTTTCAACCTTGCTCTTATGAAGAAAGGGAACCCCTTTTCTTCTCTTaGTTCATCCGGCAATCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: SKGQGPKMFQPCSYEEREPLFFS*FIRQSS Trigger: AGAGGATTGCCGGATGAATCAAGAGAAGAAAAGGGG...TTCCCTTTCTTCATAAGAGCAAGGTTGAAACATTTTTGGCCCTTGCCCCTTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR-3UTR CCA 90 bp | CTTGCTAAACACATACAAAGTAGAACTCAAAGAACTCAAACTTGCCCTTCTGCGGGTACTAACAGGTGGTaGGGCAGTGATAACACTTCC | + |
|
Preference number: 2 (lower is better) Translates to: LAKHIQSRTQRTQTCPSAGTNRW*GSDNTS Trigger: GGAAGTGTTATCACTGCCCCACCACCTGTTAGTACC...CGCAGAAGGGCAAGTTTGAGTTCTTTGAGTTCTACTTTGTATGTGTTTAGCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR CCA 72 bp | TGCAGACTGTGTGAGCACCTGGGAAGCCATAGCAGCTaGTCCAGATGTAGCCCGGGCGAGACGGGGCCGCTT | + |
|
Preference number: 3 (lower is better) Translates to: CRLCEHLGSHSS*SRCSPGETGPL Trigger: AAGCGGCCCCGTCTCGCCCGGGCTACATCTGGACCAGCTGCTATGGCTTCCCAGGTGCTCACACAGTCTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR GCA 72 bp | AGCTCCTTGGCACGGCGGCGATGTTCATCACACTGCTaGTCCAGGGCTGCCAGGTCCCGTGCATACTGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SSLARRRCSSHC*SRAARSRAYCS Trigger: GGAACAGTATGCACGGGACCTGGCAGCCCTGGAGCAGCAGTGTGATGAACATCGCCGCCGTGCCAAGGAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR GCA 72 bp | GGAACCGGGGTCAGCGTCATGAGCACATTGCTGAGGTaGTGGGACTTGTGCTTCAGCTCCTTGGCACGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: GTGVSVMSTLLR*WDLCFSSLARR Trigger: CCGCCGTGCCAAGGAGCTGAAGCACAAGTCCCAGCACCTCAGCAATGTGCTCATGACGCTGACCCCGGTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR CCA 72 bp | ACCGGGGTCAGCGTCATGAGCACATTGCTGAGGTGCTaGGACTTGTGCTTCAGCTCCTTGGCACGGCGGCGA | + |
|
Preference number: 3 (lower is better) Translates to: TGVSVMSTLLRC*DLCFSSLARRR Trigger: TCGCCGCCGTGCCAAGGAGCTGAAGCACAAGTCCCAGCACCTCAGCAATGTGCTCATGACGCTGACCCCGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCCATAGCAGCTGGTCCAGATGTAGCCCGGGCGAGACGGGGCCGCTTCATAGGAGCGTCATGAGCACATaGCTGAGGTGCTGGGACTTG | + |
|
Preference number: 3 (lower is better) Translates to: SHSSWSRCSPGETGPLHRSVMST*LRCWDL Trigger: CAAGTCCCAGCACCTCAGCAATGTGCTCATGACGCT...CCTATGAAGCGGCCCCGTCTCGCCCGGGCTACATCTGGACCAGCTGCTATGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR GCA 72 bp | TTCAGCTCCTTGGCACGGCGGCGATGTTCATCACACTaGTGCTCCAGGGCTGCCAGGTCCCGTGCATACTGT | + |
|
Preference number: 3 (lower is better) Translates to: FSSLARRRCSSH*CSRAARSRAYC Trigger: ACAGTATGCACGGGACCTGGCAGCCCTGGAGCAGCAGTGTGATGAACATCGCCGCCGTGCCAAGGAGCTGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR CCA 72 bp | CTCTGTAGCTGTACCAGAAGCACCCAGGCCTCCTCCTaGTCAGTGACCCTCTGGTTCCTGCTCAAGGCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: LCSCTRSTQASS*SVTLWFLLKAQ Trigger: TTGGGCCTTGAGCAGGAACCAGAGGGTCACTGACCAGGAGGAGGCCTGGGTGCTTCTGGTACAGCTACAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR-3UTR CAA 90 bp | GATGGCAATGGAACCGGGGTCAGCGTCATGAGCACATTGCTGAGGTGCTGGGACTTGTGCTTCAGCTCCTaGGCACGGCGGCGATGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: DGNGTGVSVMSTLLRCWDLCFSS*ARRRCS Trigger: TGAACATCGCCGCCGTGCCAAGGAGCTGAAGCACAA...GTCCCAGCACCTCAGCAATGTGCTCATGACGCTGACCCCGGTTCCATTGCCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR TCA 72 bp | TGCTGCCATCCTGCATGGCGGCTGTGCTCAAAACTGTaGGGCTGGAAGTGTCCGGATGGATCTCGACTGCGT | + |
|
Preference number: 3 (lower is better) Translates to: CCHPAWRLCSKL*GWKCPDGSRLR Trigger: ACGCAGTCGAGATCCATCCGGACACTTCCAGCCTCACAGTTTTGAGCACAGCCGCCATGCAGGATGGCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR GCA 72 bp | AACTGTGAGGCTGGAAGTGTCCGGATGGATCTCGACTaGGTTGGGGAAGGTAGAGCCAGAGGAGGCCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: NCEAGSVRMDLD*VGEGRARGGQN Trigger: GTTCTGGCCTCCTCTGGCTCTACCTTCCCCAACGCAGTCGAGATCCATCCGGACACTTCCAGCCTCACAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR TCA 72 bp | TGGTCCAGTCACCAGGGTCCTCACAGGTCTCTATGGTaGTGGTGGCAGGTGAGCCATTCACATCAGCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: WSSHQGPHRSLW*WWQVSHSHQLQ Trigger: CTGCAGCTGATGTGAATGGCTCACCTGCCACCATCACCATAGAGACCTGTGAGGACCCTGGTGACTGGACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR GCA 72 bp | AGCGTCATGAGCACATTGCTGAGGTGCTGGGACTTGTaGTTCAGCTCCTTGGCACGGCGGCGATGTTCATCA | + |
|
Preference number: 3 (lower is better) Translates to: SVMSTLLRCWDL*FSSLARRRCSS Trigger: TGATGAACATCGCCGCCGTGCCAAGGAGCTGAAGCACAAGTCCCAGCACCTCAGCAATGTGCTCATGACGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR GCA 72 bp | TCCTCTGCTACAGCAGCCACCTCAATAGTGGCCGTGTaGTCCTCAGGTCCAGTGGCAGTTGCTGTAGGCATT | + |
|
Preference number: 3 (lower is better) Translates to: SSATAATSIVAV*SSGPVAVAVGI Trigger: AATGCCTACAGCAACTGCCACTGGACCTGAGGAGCACACGGCCACTATTGAGGTGGCTGCTGTAGCAGAGGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR CCA 72 bp | CCGTGTTTGCATGTGGAGGGGGAAGACCTTCCTTCCTaGGTCCTAAATGGCCCAACAAGCAGGGAACACAGC | + |
|
Preference number: 3 (lower is better) Translates to: PCLHVEGEDLPS*VLNGPTSREHS Trigger: GCTGTGTTCCCTGCTTGTTGGGCCATTTAGGACCCAGGAAGGAAGGTCTTCCCCCTCCACATGCAAACACGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR CCA 72 bp | GGACTCAAAGCAATCTGTGCAGACTGTGTGAGCACCTaGGAAGCCATAGCAGCTGGTCCAGATGTAGCCCGG | + |
|
Preference number: 3 (lower is better) Translates to: GLKAICADCVST*EAIAAGPDVAR Trigger: CCGGGCTACATCTGGACCAGCTGCTATGGCTTCCCAGGTGCTCACACAGTCTGCACAGATTGCTTTGAGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR CCA 72 bp | GCTGTGCTCAAAACTGTGAGGCTGGAAGTGTCCGGATaGATCTCGACTGCGTTGGGGAAGGTAGAGCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: AVLKTVRLEVSG*ISTALGKVEPE Trigger: CTCTGGCTCTACCTTCCCCAACGCAGTCGAGATCCATCCGGACACTTCCAGCCTCACAGTTTTGAGCACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR TCA 72 bp | AGGTCCCGTGCATACTGTTCCCGGGAACGATCCATCTaGCACTTGTGGCTGGCCAGTACCTTCTTCACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: RSRAYCSRERSI*HLWLASTFFTR Trigger: TCTGGTGAAGAAGGTACTGGCCAGCCACAAGTGTCAGATGGATCGTTCCCGGGAACAGTATGCACGGGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR GCA 72 bp | CTGGGACACAGGCATTCCTGGACTCAAAGCAATCTGTaGAGACTGTGTGAGCACCTGGGAAGCCATAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LGHRHSWTQSNL*RLCEHLGSHSS Trigger: GCTGCTATGGCTTCCCAGGTGCTCACACAGTCTGCACAGATTGCTTTGAGTCCAGGAATGCCTGTGTCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR GCA 72 bp | AAGGGGCTGACTACCTTCAGTACTGTGCTGCCATCCTaGATGGCGGCTGTGCTCAAAACTGTGAGGCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: KGLTTFSTVLPS*MAAVLKTVRLE Trigger: TTCCAGCCTCACAGTTTTGAGCACAGCCGCCATGCAGGATGGCAGCACAGTACTGAAGGTAGTCAGCCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR CCA 72 bp | CTCCCAGAACTGAGGGTTCCATGCAGACGGGACTATTaGTCCTTCTCTGTCCTGCTAGAAGCTGCCTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LPELRVPCRRDY*SFSVLLEAALE Trigger: CTCCAAGGCAGCTTCTAGCAGGACAGAGAAGGACCAATAGTCCCGTCTGCATGGAACCCTCAGTTCTGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR CCA 72 bp | CTCAAAGAACTCAAACTTGCCCTTCTGCGTGCCTCCTaGGCAGGCATGGAAAGGAGCTTGCACCCTCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: LKELKLALLRAS*AGMERSLHPLQ Trigger: TTGCAGAGGGTGCAAGCTCCTTTCCATGCCTGCCCAGGAGGCACGCAGAAGGGCAAGTTTGAGTTCTTTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR CCA 72 bp | GACAGTGGAGGGCAGTGTAGATACTACTTTGCCCAGTaGCACACTGGTCAACTGGGACACAGGCATTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: DSGGQCRYYFAQ*HTGQLGHRHSW Trigger: CCAGGAATGCCTGTGTCCCAGTTGACCAGTGTGCCACTGGGCAAAGTAGTATCTACACTGCCCTCCACTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR GCA 72 bp | AAAACCAAACTGAAAGCAGCCACAAGCACCCGTGTTTaGATGTGGAGGGGGAAGACCTTCCTTCCTGGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: KTKLKAATSTRV*MWRGKTFLPGS Trigger: GGACCCAGGAAGGAAGGTCTTCCCCCTCCACATGCAAACACGGGTGCTTGTGGCTGCTTTCAGTTTGGTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR GCA 72 bp | AGTAGAACTCAAAGAACTCAAACTTGCCCTTCTGCGTaGCTCCTGGGCAGGCATGGAAAGGAGCTTGCACCC | + |
|
Preference number: 3 (lower is better) Translates to: SRTQRTQTCPSA*LLGRHGKELAP Trigger: GGGTGCAAGCTCCTTTCCATGCCTGCCCAGGAGGCACGCAGAAGGGCAAGTTTGAGTTCTTTGAGTTCTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR CCA 72 bp | GAAGGGCCCAGTCACAGCAATGGTGTAAAAGCAATCTaGGCACTCGAGGGGATGCATGGATGGAAGGACAAG | + |
|
Preference number: 3 (lower is better) Translates to: EGPSHSNGVKAI*ALEGMHGWKDK Trigger: CTTGTCCTTCCATCCATGCATCCCCTCGAGTGCCCAGATTGCTTTTACACCATTGCTGTGACTGGGCCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR CCA 72 bp | CCCGCCAGAATGCAAATGTGTCATCTCCAATGGTTGTaGTCCAGTCACCAGGGTCCTCACAGGTCTCTATGG | + |
|
Preference number: 3 (lower is better) Translates to: PARMQMCHLQWL*SSHQGPHRSLW Trigger: CCATAGAGACCTGTGAGGACCCTGGTGACTGGACCACAACCATTGGAGATGACACATTTGCATTCTGGCGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR CCA 72 bp | ACTGTTCCCGGGAACGATCCATCTGACACTTGTGGCTaGCCAGTACCTTCTTCACCAGATCCAGCATGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: TVPGNDPSDTCG*PVPSSPDPACQ Trigger: TTGGCATGCTGGATCTGGTGAAGAAGGTACTGGCCAGCCACAAGTGTCAGATGGATCGTTCCCGGGAACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR CCA 72 bp | CAGTGGCACACTGGTCAACTGGGACACAGGCATTCCTaGACTCAAAGCAATCTGTGCAGACTGTGTGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: QWHTGQLGHRHS*TQSNLCRLCEH Trigger: GTGCTCACACAGTCTGCACAGATTGCTTTGAGTCCAGGAATGCCTGTGTCCCAGTTGACCAGTGTGCCACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR TCA 72 bp | GAAGAAAGGGAACTGGCCCACATCCCCCAAAGCAAATaGCATCTGGGGCTTGTGCCAAGGAAAGACTCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: EERELAHIPQSK*HLGLVPRKDSW Trigger: CCAAGAGTCTTTCCTTGGCACAAGCCCCAGATGTCATTTGCTTTGGGGGATGTGGGCCAGTTCCCTTTCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR CCA 72 bp | TCAGTAGGAACCAGAGAGGCAGGTACTAACAGGTGGTaGGGCAGTGATAACACTTCCTCTCCCAGAACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SVGTREAGTNRW*GSDNTSSPRTE Trigger: CTCAGTTCTGGGAGAGGAAGTGTTATCACTGCCCCACCACCTGTTAGTACCTGCCTCTCTGGTTCCTACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR-3UTR CAA 90 bp | AACACTTCCTCTCCCAGAACTGAGGGTTCCATGCAGACGGGACTATTGGTCCTTCTAGGTGTGTATATATaGGTGCCCTGGGTCCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: NTSSPRTEGSMQTGLLVLLGVYI*VPWVPP Trigger: AGGAGGGACCCAGGGCACCAATATATACACACCTAG...AAGGACCAATAGTCCCGTCTGCATGGAACCCTCAGTTCTGGGAGAGGAAGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR TCA 72 bp | TGTGGATGTAGGACTGCTCAGGGATACACGTGCCCCTaGAAGGTCAATCTTCGTGCTGCGGCAAGTATTAGA | + |
|
Preference number: 3 (lower is better) Translates to: CGCRTAQGYTCP*KVNLRAAASIR Trigger: TCTAATACTTGCCGCAGCACGAAGATTGACCTTTCAGGGGCACGTGTATCCCTGAGCAGTCCTACATCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141003.2 ENSMUST00000141110.8 |
||
| 3UTR CCA 72 bp | AAGTCAGTAGGAACCAGAGAGGCAGGTACTAACAGGTaGTGGGGCAGTGATAACACTTCCTCTCCCAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: KSVGTREAGTNR*WGSDNTSSPRT Trigger: AGTTCTGGGAGAGGAAGTGTTATCACTGCCCCACCACCTGTTAGTACCTGCCTCTCTGGTTCCTACTGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR CCA 72 bp | TTAATCCCCGCCAGAATGCAAATGTGTCATCTCCAATaGTTGTGGTCCAGTCACCAGGGTCCTCACAGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LIPARMQMCHLQ*LWSSHQGPHRS Trigger: AGACCTGTGAGGACCCTGGTGACTGGACCACAACCATTGGAGATGACACATTTGCATTCTGGCGGGGATTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR TCA 72 bp | GCCTTCCATGGAACATTTTGGATCCTGTCTTCCAGCTaGCCAACCCACCACTCTAAACAGCCTTACATACCC | + |
|
Preference number: 3 (lower is better) Translates to: AFHGTFWILSSS*PTHHSKQPYIP Trigger: GGGTATGTAAGGCTGTTTAGAGTGGTGGGTTGGTCAGCTGGAAGACAGGATCCAAAATGTTCCATGGAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR CCA 72 bp | TCTCAGGGAAAGACACTACTTAAGACCTCTAGCACCTaGCTAGGTGTGTATATATTGGTGCCCTGGGTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: SQGKTLLKTSST*LGVYILVPWVP Trigger: AGGGACCCAGGGCACCAATATATACACACCTAGCCAGGTGCTAGAGGTCTTAAGTAGTGTCTTTCCCTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR CCA 72 bp | TGGTGTAAAAGCAATCTGGGCACTCGAGGGGATGCATaGATGGAAGGACAAGGTAGCCTTCAAAGCAGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: WCKSNLGTRGDA*MEGQGSLQSSE Trigger: TTCACTGCTTTGAAGGCTACCTTGTCCTTCCATCCATGCATCCCCTCGAGTGCCCAGATTGCTTTTACACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR-3UTR CAA 90 bp | AGGATCTATGGCTTCCACACTCAGGCATGCTGCCTAAGACATGTGTCAATAATGGACAGATTTTCCAGGTaGCTGGCAACATTCTGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: RIYGFHTQACCLRHVSIMDRFSR*LATFCP Trigger: GGGGCAGAATGTTGCCAGCAACCTGGAAAATCTGTC...CATTATTGACACATGTCTTAGGCAGCATGCCTGAGTGTGGAAGCCATAGATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR-3UTR CAA 90 bp | GAGGGGGAAGACCTTCCTTCCTGGGTCCTAAATGGCCCAACAAGCAGGGAACACGAGGAAGTTTATATGTaGAAGACAGATTTTCCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: EGEDLPSWVLNGPTSREHEEVYM*KTDFPG Trigger: ACCTGGAAAATCTGTCTTCAACATATAAACTTCCTC...GTGTTCCCTGCTTGTTGGGCCATTTAGGACCCAGGAAGGAAGGTCTTCCCCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR-3UTR CAA 90 bp | AACACTTCCTCTCCCAGAACTGAGGGTTCCATGCAGACGGGACTATTGGTCCTTGAATCTTCCAGAGCTTaGTCTCAGGGAAAGACACTA | + |
|
Preference number: 3 (lower is better) Translates to: NTSSPRTEGSMQTGLLVLESSRA*SQGKTL Trigger: TAGTGTCTTTCCCTGAGACAAAGCTCTGGAAGATTC...AAGGACCAATAGTCCCGTCTGCATGGAACCCTCAGTTCTGGGAGAGGAAGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR-3UTR CAA 90 bp | AACACTTCCTCTCCCAGAACTGAGGGTTCCATGCAGACGGGACTATTGGTCCTTACTTTGTTCCCTGAATaGTTTGGCTCCAAAAACTCT | + |
|
Preference number: 3 (lower is better) Translates to: NTSSPRTEGSMQTGLLVLTLFPE*FGSKNS Trigger: AGAGTTTTTGGAGCCAAACAATTCAGGGAACAAAGT...AAGGACCAATAGTCCCGTCTGCATGGAACCCTCAGTTCTGGGAGAGGAAGTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR TCA 72 bp | TGGGCTGATCACATGTTCATCATACTGACCCTCACCTaGACACATTTCACATTGATGCCAGGGCACACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: WADHMFIILTLT*THFTLMPGHTN Trigger: GTTTGTGTGCCCTGGCATCAATGTGAAATGTGTTCAGGTGAGGGTCAGTATGATGAACATGTGATCAGCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR GCA 72 bp | AAACACATACAAAGTAGAACTCAAAGAACTCAAACTTaGCCTTCTGCGTGCCTCCTGGGCAGGCATGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: KHIQSRTQRTQT*PSACLLGRHGK Trigger: CTTTCCATGCCTGCCCAGGAGGCACGCAGAAGGGCAAGTTTGAGTTCTTTGAGTTCTACTTTGTATGTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR GCA 72 bp | CTCTTCCAATCCTTCAAGGTAGATTTCCCTGCCAGGTaGACAAACTCCTTTGGGCTGATCACATGTTCATCA | + |
|
Preference number: 3 (lower is better) Translates to: LFQSFKVDFPAR*TNSFGLITCSS Trigger: TGATGAACATGTGATCAGCCCAAAGGAGTTTGTGCACCTGGCAGGGAAATCTACCTTGAAGGATTGGAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR CCA 72 bp | AAATGTTTCAACCTTGCTCTTATGAAGAAAGGGAACTaGCCCACATCCCCCAAAGCAAATGACATCTGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: KCFNLALMKKGN*PTSPKANDIWG Trigger: GCCCCAGATGTCATTTGCTTTGGGGGATGTGGGCCAGTTCCCTTTCTTCATAAGAGCAAGGTTGAAACATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR TCA 72 bp | TCATGGTTTCCTCTAGCTCCTGTTGAAATTCCTGTATaGCTTCATCCAGTAAGCCCGCATCCTTTAATCCCC | + |
|
Preference number: 3 (lower is better) Translates to: SWFPLAPVEIPV*LHPVSPHPLIP Trigger: GGGGATTAAAGGATGCGGGCTTACTGGATGAAGTCATACAGGAATTTCAACAGGAGCTAGAGGAAACCATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTGCTAAACACATACAAAGTAGAACTCAAAGAACTCAAACTTGCCCTTCTGCGCCCCCTTTTCTTCTCTaGATTCATCCGGCAATCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LAKHIQSRTQRTQTCPSAPPFLL*IHPAIL Trigger: GAGGATTGCCGGATGAATCAAGAGAAGAAAAGGGGG...CGCAGAAGGGCAAGTTTGAGTTCTTTGAGTTCTACTTTGTATGTGTTTAGCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR TCA 72 bp | GGGCAGGAAGGTTTTATTTGTGACATTAATCTAGTCTaGGCTTGTAGAGCAGGGACTTCAAGGAAGTACCCA | + |
|
Preference number: 3 (lower is better) Translates to: GQEGFICDINLV*ACRAGTSRKYP Trigger: TGGGTACTTCCTTGAAGTCCCTGCTCTACAAGCTCAGACTAGATTAATGTCACAAATAAAACCTTCCTGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR TCA 72 bp | AACCAAATCCTGTCCTATCTTTTCAGAAAACCAAACTaGAAGCAGCCACAAGCACCCGTGTTTGCATGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: NQILSYLFRKPN*KQPQAPVFACG Trigger: TCCACATGCAAACACGGGTGCTTGTGGCTGCTTTCAGTTTGGTTTTCTGAAAAGATAGGACAGGATTTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR TCA 72 bp | TCTGAAGCTGATTTGAGAATTATTTTCGTATGGCTCTaGAATAAATTTCACCTTCCAGTACCTCCATGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SEADLRIIFVWL*NKFHLPVPPCS Trigger: AGAGCATGGAGGTACTGGAAGGTGAAATTTATTTCAGAGCCATACGAAAATAATTCTCAAATCAGCTTCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR TCA 90 bp | GAGCAGGGACTTCAAGGAAGTACCCACCCTGCTGGTCCTCCCAATGCCCCTAAACTGGCTGGGGCAGCTTaGGGAGAGCCCTTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EQGLQGSTHPAGPPNAPKLAGAA*GEPLPR Trigger: CCTGGGCAAGGGCTCTCCTCAAGCTGCCCCAGCCAG...TTTAGGGGCATTGGGAGGACCAGCAGGGTGGGTACTTCCTTGAAGTCCCTGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR CCA 90 bp | GAGGGGGAAGACCTTCCTTCCTGGGTCCTAAATGGCCCAACAAGCAGGGAACACTCGGAGCTGCAGGGGTaGGTCCTGCACTCGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGEDLPSWVLNGPTSREHSELQG*VLHSLL Trigger: CAGCAGCGAGTGCAGGACCCACCCCTGCAGCTCCGA...GTGTTCCCTGCTTGTTGGGCCATTTAGGACCCAGGAAGGAAGGTCTTCCCCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR GCA 90 bp | GAGCAGGGACTTCAAGGAAGTACCCACCCTGCTGGTCCTCCCAATGCCCCTAAACTTGAGGAGAGCCCTTaGCCAGGACAGTGGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EQGLQGSTHPAGPPNAPKLEESP*PGQWRA Trigger: TGCCCTCCACTGTCCTGGGCAAGGGCTCTCCTCAAG...TTTAGGGGCATTGGGAGGACCAGCAGGGTGGGTACTTCCTTGAAGTCCCTGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR CCA 90 bp | GACCAACCCACCACTCTAAACAGCCTTACATACCCCGGAGCTCTCAGGATAGAGGGGAGGCCGGTGAACTaGCTGGGGCAGCTTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DQPTTLNSLTYPGALRIEGRPVN*LGQLEE Trigger: CTCCTCAAGCTGCCCCAGCCAGTTCACCGGCCTCCC...CTCTATCCTGAGAGCTCCGGGGTATGTAAGGCTGTTTAGAGTGGTGGGTTGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR TCA 90 bp | GAGGGGGAAGACCTTCCTTCCTGGGTCCTAAATGGCCCAACAAGCAGGGAACACCCTGCAGGTGATGCCTaGGCCACATTCTGTAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EGEDLPSWVLNGPTSREHPAGDA*ATFCRV Trigger: CACCCTACAGAATGTGGCTCAGGCATCACCTGCAGG...GTGTTCCCTGCTTGTTGGGCCATTTAGGACCCAGGAAGGAAGGTCTTCCCCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR GCA 90 bp | GCCTTCAAAGCAGTGAAATGGGACAGTGGCCCTTCCTGCTGTGGGGCCCTTGAAGGGTCCTGCACTCGCTaGTGCAGGCCTTTCATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: AFKAVKWDSGPSCCGALEGSCTR*CRPFMV Trigger: AACCATGAAAGGCCTGCAGCAGCGAGTGCAGGACCC...TTCAAGGGCCCCACAGCAGGAAGGGCCACTGTCCCATTTCACTGCTTTGAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR GCA 90 bp | GCCTTCAAAGCAGTGAAATGGGACAGTGGCCCTTCCTGCTGTGGGGCCCTTGAAAGGTGCTGGGACTTGTaGTTCAGCTCCTTGGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: AFKAVKWDSGPSCCGALERCWDL*FSSLAR Trigger: CCGTGCCAAGGAGCTGAAGCACAAGTCCCAGCACCT...TTCAAGGGCCCCACAGCAGGAAGGGCCACTGTCCCATTTCACTGCTTTGAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR CCA 90 bp | CTGGGACTTGTGCTTCAGCTCCTTGGCACGGCGGCGATGTTCATCACACTGCTGACCACCTCCTCCATGTaGACGCTCACATCTGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LGLVLQLLGTAAMFITLLTTSSM*TLTSGV Trigger: AACCCCAGATGTGAGCGTCCACATGGAGGAGGTGGT...CAGCAGTGTGATGAACATCGCCGCCGTGCCAAGGAGCTGAAGCACAAGTCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| 3UTR CAA 72 bp | GTCAGCGTCATGAGCACATTGCTGAGGTGCTGGGACTaGTGCTTCAGCTCCTTGGCACGGCGGCGATGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSVMSTLLRCWD*CFSSLARRRCS Trigger: TGAACATCGCCGCCGTGCCAAGGAGCTGAAGCACAAGTCCCAGCACCTCAGCAATGTGCTCATGACGCTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| CDS-3UTR TCA 90 bp | GAGCAGGGACTTCAAGGAAGTACCCACCCTGCTGGTCCTCCCAATGCCCCTAAAGGCTTCCTTGAGCTGTaGGGAGGCTGTAAAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EQGLQGSTHPAGPPNAPKGFLEL*GGCKSS Trigger: GCTGCTTTTACAGCCTCCTCACAGCTCAAGGAAGCC...TTTAGGGGCATTGGGAGGACCAGCAGGGTGGGTACTTCCTTGAAGTCCCTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR GCA 90 bp | AACACTTCCTCTCCCAGAACTGAGGGTTCCATGCAGACGGGACTATTGGTCCTTCTGCTGCTCCAGGGCTaGCAGGTCCCGTGCATACTG | + |
|
Preference number: 4 (lower is better) Translates to: NTSSPRTEGSMQTGLLVLLLLQG*QVPCIL Trigger: CAGTATGCACGGGACCTGGCAGCCCTGGAGCAGCAG...AAGGACCAATAGTCCCGTCTGCATGGAACCCTCAGTTCTGGGAGAGGAAGTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR GCA 90 bp | GACCAACCCACCACTCTAAACAGCCTTACATACCCCGGAGCTCTCAGGATAGAGGGCAGGGTGAGCAGCTaGAAGGGGCTGACTACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DQPTTLNSLTYPGALRIEGRVSS*KGLTTF Trigger: GAAGGTAGTCAGCCCCTTGCAGCTGCTCACCCTGCC...CTCTATCCTGAGAGCTCCGGGGTATGTAAGGCTGTTTAGAGTGGTGGGTTGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR GCA 90 bp | GAGCAGGGACTTCAAGGAAGTACCCACCCTGCTGGTCCTCCCAATGCCCCTAAATCAATAGTGGCCGTGTaGTCCTCAGGTCCAGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EQGLQGSTHPAGPPNAPKSIVAV*SSGPVA Trigger: TGCCACTGGACCTGAGGAGCACACGGCCACTATTGA...TTTAGGGGCATTGGGAGGACCAGCAGGGTGGGTACTTCCTTGAAGTCCCTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR CCA 90 bp | GAGGGGATGCATGGATGGAAGGACAAGGTAGCCTTCAAAGCAGTGAAATGGGACCCACATTCTGTAGGGTaGGTCCCAGGCCAGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EGMHGWKDKVAFKAVKWDPHSVG*VPGQAG Trigger: CCCTGCCTGGCCTGGGACCCACCCTACAGAATGTGG...GTCCCATTTCACTGCTTTGAAGGCTACCTTGTCCTTCCATCCATGCATCCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR TCA 90 bp | GACCAACCCACCACTCTAAACAGCCTTACATACCCCGGAGCTCTCAGGATAGAGCGGGAACGATCCATCTaGCACTTGTGGCTGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DQPTTLNSLTYPGALRIERERSI*HLWLAS Trigger: ACTGGCCAGCCACAAGTGTCAGATGGATCGTTCCCG...CTCTATCCTGAGAGCTCCGGGGTATGTAAGGCTGTTTAGAGTGGTGGGTTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR TCA 90 bp | AACACTTCCTCTCCCAGAACTGAGGGTTCCATGCAGACGGGACTATTGGTCCTTGGTGCTGCCTGCAGGTaGTGCCTGAGCCACATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NTSSPRTEGSMQTGLLVLGAACR*CLSHIL Trigger: CAGAATGTGGCTCAGGCATCACCTGCAGGCAGCACC...AAGGACCAATAGTCCCGTCTGCATGGAACCCTCAGTTCTGGGAGAGGAAGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR GCA 90 bp | CCAGGGCATGTTCCCACCAGCGAAGGAACATGGACACTGGCCATACTGAACCAATCCTGCACTCGCTGCTaGAGGCCTTTCATGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGHVPTSEGTWTLAILNQSCTRC*RPFMVS Trigger: GGAAACCATGAAAGGCCTGCAGCAGCGAGTGCAGGA...TTGGTTCAGTATGGCCAGTGTCCATGTTCCTTCGCTGGTGGGAACATGCCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR GCA 90 bp | CCAGGGCATGTTCCCACCAGCGAAGGAACATGGACACTGGCCATACTGAACCAACTACCTTCAGTACTGTaGTGCCATCCTGCATGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PGHVPTSEGTWTLAILNQLPSVL*CHPAWR Trigger: CCGCCATGCAGGATGGCAGCACAGTACTGAAGGTAG...TTGGTTCAGTATGGCCAGTGTCCATGTTCCTTCGCTGGTGGGAACATGCCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR GCA 90 bp | GCCTTCAAAGCAGTGAAATGGGACAGTGGCCCTTCCTGCTGTGGGGCCCTTGAACTGCTCATGGTCCTCTaGTACAGCAGCCACCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: AFKAVKWDSGPSCCGALELLMVL*YSSHLN Trigger: ATTGAGGTGGCTGCTGTAGCAGAGGACCATGAGCAG...TTCAAGGGCCCCACAGCAGGAAGGGCCACTGTCCCATTTCACTGCTTTGAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR CCA 90 bp | GTACTAACAGGTGGTGGGGCAGTGATAACACTTCCTCTCCCAGAACTGAGGGTTGGAAGCCATAGCAGCTaGTCCAGATGTAGCCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLTGGGAVITLPLPELRVGSHSS*SRCSPG Trigger: GCCCGGGCTACATCTGGACCAGCTGCTATGGCTTCC...AACCCTCAGTTCTGGGAGAGGAAGTGTTATCACTGCCCCACCACCTGTTAGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR CAA 72 bp | ACCAGATCCAGCATGCCAAAGTTTTGCACGATGTTGTaGAGGAGGACAGCATCTCGGAGCTGCAGGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TRSSMPKFCTML*RRTASRSCRGG Trigger: CCCACCCCTGCAGCTCCGAGATGCTGTCCTCCTCAACAACATCGTGCAAAACTTTGGCATGCTGGATCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| CDS-3UTR TCA 90 bp | GCTGCAGCTGGTGTGAGTGGGATGTATTCTGTGGATGTAGGACTGCTCAGGGATGGCTTCCTTGAGCTGTaGGGAGGCTGTAAAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AAAGVSGMYSVDVGLLRDGFLEL*GGCKSS Trigger: GCTGCTTTTACAGCCTCCTCACAGCTCAAGGAAGCC...ATCCCTGAGCAGTCCTACATCCACAGAATACATCCCACTCACACCAGCTGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141003.2 ENSMUST00000141110.8 |
||
| CDS-3UTR TCA 90 bp | AGAACTCAAAGAACTCAAACTTGCCCTTCTGCGTGCCTCCTGGGCAGGCATGGACAGCTGCAGCTGGTGTaGGTGGGATGTATTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RTQRTQTCPSACLLGRHGQLQLV*VGCILW Trigger: CCACAGAATACATCCCACTCACACCAGCTGCAGCTG...TCCATGCCTGCCCAGGAGGCACGCAGAAGGGCAAGTTTGAGTTCTTTGAGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR GCA 90 bp | GTGCCTCCTGGGCAGGCATGGAAAGGAGCTTGCACCCTCTGCAAAACCAAATCCCTTCCTCTACACCACTaGCATCAACTGCAGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VPPGQAWKGACTLCKTKSLPLHH*HQLQCL Trigger: CAGACACTGCAGTTGATGGCAGTGGTGTAGAGGAAG...GGATTTGGTTTTGCAGAGGGTGCAAGCTCCTTTCCATGCCTGCCCAGGAGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR GCA 90 bp | GAAGACCTTCCTTCCTGGGTCCTAAATGGCCCAACAAGCAGGGAACACAGCAATCGATGTTCATCACACTaGTGCTCCAGGGCTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EDLPSWVLNGPTSREHSNRCSSH*CSRAAR Trigger: CCTGGCAGCCCTGGAGCAGCAGTGTGATGAACATCG...ATTGCTGTGTTCCCTGCTTGTTGGGCCATTTAGGACCCAGGAAGGAAGGTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR CCA 90 bp | ACACGTGCCCCTGAAAGGTCAATCTTCGTGCTGCGGCAAGTATTAGAGCAGACCACCACCTCCTCCATGTaGACGCTCACATCTGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TRAPERSIFVLRQVLEQTTTSSM*TLTSGV Trigger: AACCCCAGATGTGAGCGTCCACATGGAGGAGGTGGT...GGTCTGCTCTAATACTTGCCGCAGCACGAAGATTGACCTTTCAGGGGCACGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000141003.2 ENSMUST00000141110.8 |
||
| CDS-3UTR CCA 90 bp | ACTGGCCCACATCCCCCAAAGCAAATGACATCTGGGGCTTGTGCCAAGGAAAGATGTGCTTCAGCTCCTTaGCACGGCGGCGATGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TGPHPPKQMTSGACAKERCASAP*HGGDVH Trigger: ATGAACATCGCCGCCGTGCCAAGGAGCTGAAGCACA...TCTTTCCTTGGCACAAGCCCCAGATGTCATTTGCTTTGGGGGATGTGGGCCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR CAA 72 bp | TCTCCCAGAACTGAGGGTTCCATGCAGACGGGACTATaGGTCCTTCTCTGTCCTGCTAGAAGCTGCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPRTEGSMQTGL*VLLCPARSCLG Trigger: TCCAAGGCAGCTTCTAGCAGGACAGAGAAGGACCAATAGTCCCGTCTGCATGGAACCCTCAGTTCTGGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR CAA 72 bp | GAAAACCAAACTGAAAGCAGCCACAAGCACCCGTGTTaGCATGTGGAGGGGGAAGACCTTCCTTCCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ENQTESSHKHPC*HVEGEDLPSWV Trigger: GACCCAGGAAGGAAGGTCTTCCCCCTCCACATGCAAACACGGGTGCTTGTGGCTGCTTTCAGTTTGGTTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| CDS-3UTR TCA 90 bp | TCTAAGGGGCAAGGGCCAAAAATGTTTCAACCTTGCTCTTATGAAGAAAGGGAACAGTGGGGAGGCCGGTaGACTGGCTGGGGCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SKGQGPKMFQPCSYEEREQWGGR*TGWGSL Trigger: CAAGCTGCCCCAGCCAGTTCACCGGCCTCCCCACTG...TTCCCTTTCTTCATAAGAGCAAGGTTGAAACATTTTTGGCCCTTGCCCCTTAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR GCA 90 bp | GAGGGGGAAGACCTTCCTTCCTGGGTCCTAAATGGCCCAACAAGCAGGGAACACAGCAGCAGCTGCAGCTaGTGCATTTTCTGTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EGEDLPSWVLNGPTSREHSSSCS*CIFCFH Trigger: ATGGAAACAGAAAATGCAGCAGCTGCAGCTGCTGCT...GTGTTCCCTGCTTGTTGGGCCATTTAGGACCCAGGAAGGAAGGTCTTCCCCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| CDS-3UTR GCA 90 bp | GTGCCTCCTGGGCAGGCATGGAAAGGAGCTTGCACCCTCTGCAAAACCAAATCCAAAAGCAGCAGCAGCTaGAGCTGCTGCATTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VPPGQAWKGACTLCKTKSKSSSS*SCCIFC Trigger: ACAGAAAATGCAGCAGCTGCAGCTGCTGCTGCTTTT...GGATTTGGTTTTGCAGAGGGTGCAAGCTCCTTTCCATGCCTGCCCAGGAGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR GCA 90 bp | GAGGGGGAAGACCTTCCTTCCTGGGTCCTAAATGGCCCAACAAGCAGGGAACACCAAGGTAGATTTCCCTaGCAGGTGCACAAACTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EGEDLPSWVLNGPTSREHQGRFP*QVHKLL Trigger: AAGGAGTTTGTGCACCTGGCAGGGAAATCTACCTTG...GTGTTCCCTGCTTGTTGGGCCATTTAGGACCCAGGAAGGAAGGTCTTCCCCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR GCA 90 bp | GACCAACCCACCACTCTAAACAGCCTTACATACCCCGGAGCTCTCAGGATAGAGAGCACATTGCTGAGGTaGTGGGACTTGTGCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DQPTTLNSLTYPGALRIESTLLR*WDLCFS Trigger: GCTGAAGCACAAGTCCCAGCACCTCAGCAATGTGCT...CTCTATCCTGAGAGCTCCGGGGTATGTAAGGCTGTTTAGAGTGGTGGGTTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR CCA 90 bp | GAGGGGATGCATGGATGGAAGGACAAGGTAGCCTTCAAAGCAGTGAAATGGGACACCACCTCCTCCATGTaGACGCTCACATCTGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: EGMHGWKDKVAFKAVKWDTTSSM*TLTSGV Trigger: AACCCCAGATGTGAGCGTCCACATGGAGGAGGTGGT...GTCCCATTTCACTGCTTTGAAGGCTACCTTGTCCTTCCATCCATGCATCCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| CDS-3UTR CCA 90 bp | TGCTGCCTAAGACATGTGTCAATAATGTCCCAGCAGGCTCAGCCCCATGGGGGTCACATCAGCTGCAGCTaGTGTGAGTGGGATGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: CCLRHVSIMSQQAQPHGGHISCS*CEWDVF Trigger: GAATACATCCCACTCACACCAGCTGCAGCTGATGTG...ACCCCCATGGGGCTGAGCCTGCTGGGACATTATTGACACATGTCTTAGGCAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| CDS-3UTR CCA 90 bp | AGAACTCAAAGAACTCAAACTTGCCCTTCTGCGTGCCTCCTGGGCAGGCATGGAACATTGCTGAGGTGCTaGGACTTGTGCTTCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RTQRTQTCPSACLLGRHGTLLRC*DLCFSS Trigger: GGAGCTGAAGCACAAGTCCCAGCACCTCAGCAATGT...TCCATGCCTGCCCAGGAGGCACGCAGAAGGGCAAGTTTGAGTTCTTTGAGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| 3UTR CAA 72 bp | TTCACCAGATCCAGCATGCCAAAGTTTTGCACGATGTaGTTGAGGAGGACAGCATCTCGGAGCTGCAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FTRSSMPKFCTM*LRRTASRSCRG Trigger: ACCCCTGCAGCTCCGAGATGCTGTCCTCCTCAACAACATCGTGCAAAACTTTGGCATGCTGGATCTGGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| CDS-3UTR TCA 90 bp | ATCTGTGCAGACTGTGTGAGCACCTGGGAAGCCATAGCAGCTGGTCCAGATGTAGTCAAATCACCCCCATaGGGAGCTAGGTTCGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ICADCVSTWEAIAAGPDVVKSPP*GARFVV Trigger: AACAACGAACCTAGCTCCTCATGGGGGTGATTTGAC...TACATCTGGACCAGCTGCTATGGCTTCCCAGGTGCTCACACAGTCTGCACAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| CDS-3UTR TCA 90 bp | GTGCCTCCTGGGCAGGCATGGAAAGGAGCTTGCACCCTCTGCAAAACCAAATCCGTTGAAATTCCTGTATaGCTTCATCCAGTAAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: VPPGQAWKGACTLCKTKSVEIPV*LHPVSP Trigger: CGGGCTTACTGGATGAAGTCATACAGGAATTTCAAC...GGATTTGGTTTTGCAGAGGGTGCAAGCTCCTTTCCATGCCTGCCCAGGAGGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR GCA 90 bp | AGCTGCAGCTGGTGTGAGTGGGATGTATTCTGTGGATGTAGGACTGCTCAGGGAACCACTGCCATCAACTaGAGTGTCTGGAGTTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SCSWCEWDVFCGCRTAQGTTAIN*SVWSCH Trigger: GTGACAACTCCAGACACTGCAGTTGATGGCAGTGGT...TCCCTGAGCAGTCCTACATCCACAGAATACATCCCACTCACACCAGCTGCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141003.2 ENSMUST00000141110.8 |
||
| CDS-3UTR GCA 90 bp | GGGATGTATTCTGTGGATGTAGGACTGCTCAGGGATACACGTGCCCCTGAAAGGCTTCCTCTACACCACTaGCATCAACTGCAGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GMYSVDVGLLRDTRAPERLPLHH*HQLQCL Trigger: CAGACACTGCAGTTGATGGCAGTGGTGTAGAGGAAG...CCTTTCAGGGGCACGTGTATCCCTGAGCAGTCCTACATCCACAGAATACATCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141003.2 ENSMUST00000141110.8 |
||
| CDS-3UTR GCA 90 bp | GGTGAGCAGCTGCAAGGGGCTGACTACCTTCAGTACTGTGCTGCCATCCTGCATAGCAGCTGCAGCTGCTaGATTTTCTGTTTCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: GEQLQGADYLQYCAAILHSSCSC*IFCFHV Trigger: AACATGGAAACAGAAAATGCAGCAGCTGCAGCTGCT...ATGCAGGATGGCAGCACAGTACTGAAGGTAGTCAGCCCCTTGCAGCTGCTCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTCAGGGATACACGTGCCCCTGAAAGGTCAATCTTCGTGCTGCGGCAAGTAAAAAGCAGCAGCAGCTaGAGCTGCTGCATTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLRDTRAPERSIFVLRQVKSSSS*SCCIFC Trigger: ACAGAAAATGCAGCAGCTGCAGCTGCTGCTGCTTTT...TACTTGCCGCAGCACGAAGATTGACCTTTCAGGGGCACGTGTATCCCTGAGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000141003.2 ENSMUST00000141110.8 |
||
| CDS-3UTR GCA 90 bp | GAAGACCTTCCTTCCTGGGTCCTAAATGGCCCAACAAGCAGGGAACACAGCAATGATTTCCCTGCCAGGTaGACAAACTCCTTTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EDLPSWVLNGPTSREHSNDFPAR*TNSFGL Trigger: CAGCCCAAAGGAGTTTGTGCACCTGGCAGGGAAATC...ATTGCTGTGTTCCCTGCTTGTTGGGCCATTTAGGACCCAGGAAGGAAGGTCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR CCA 90 bp | ACTGGCCCACATCCCCCAAAGCAAATGACATCTGGGGCTTGTGCCAAGGAAAGAGCTGCAGGCCTTTCATaGTTTCCTCTAGCTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TGPHPPKQMTSGACAKERAAGLS*FPLAPV Trigger: AACAGGAGCTAGAGGAAACCATGAAAGGCCTGCAGC...TCTTTCCTTGGCACAAGCCCCAGATGTCATTTGCTTTGGGGGATGTGGGCCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR TCA 90 bp | GCCTTCAAAGCAGTGAAATGGGACAGTGGCCCTTCCTGCTGTGGGGCCCTTGAACAAACTCCTTTGGGCTaGTCACATGTTCATCATACT | + |
|
Preference number: 4 (lower is better) Translates to: AFKAVKWDSGPSCCGALEQTPLG*SHVHHT Trigger: AGTATGATGAACATGTGATCAGCCCAAAGGAGTTTG...TTCAAGGGCCCCACAGCAGGAAGGGCCACTGTCCCATTTCACTGCTTTGAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR GCA 90 bp | ACTACCTTCAGTACTGTGCTGCCATCCTGCATGGCGGCTGTGCTCAAAACTGTGAGCAGCAGCTGCAGCTaGTGCATTTTCTGTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TTFSTVLPSCMAAVLKTVSSSCS*CIFCFH Trigger: ATGGAAACAGAAAATGCAGCAGCTGCAGCTGCTGCT...CACAGTTTTGAGCACAGCCGCCATGCAGGATGGCAGCACAGTACTGAAGGTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
||
| CDS-3UTR GCA 90 bp | CGTGCCCCTGAAAGGTCAATCTTCGTGCTGCGGCAAGTATTAGAGCAGACCTTGAAAAGCAGCAGCAGCTaGAGCTGCTGCATTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RAPERSIFVLRQVLEQTLKSSSS*SCCIFC Trigger: ACAGAAAATGCAGCAGCTGCAGCTGCTGCTGCTTTT...CAAGGTCTGCTCTAATACTTGCCGCAGCACGAAGATTGACCTTTCAGGGGCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000141003.2 ENSMUST00000141110.8 |
||
| CDS-3UTR GCA 90 bp | GGGATGCATGGATGGAAGGACAAGGTAGCCTTCAAAGCAGTGAAATGGGACAGTGCCATTCACATCAGCTaGAGCTGGTGTGAGTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GMHGWKDKVAFKAVKWDSAIHIS*SWCEWD Trigger: ATCCCACTCACACCAGCTGCAGCTGATGTGAATGGC...ACTGTCCCATTTCACTGCTTTGAAGGCTACCTTGTCCTTCCATCCATGCATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR CCA 90 bp | GGGATGTATTCTGTGGATGTAGGACTGCTCAGGGATACACGTGCCCCTGAAAGGATCAACTGCAGTGTCTaGAGTTGTCACAACCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: GMYSVDVGLLRDTRAPERINCSV*SCHNHH Trigger: GTGGTGGTTGTGACAACTCCAGACACTGCAGTTGAT...CCTTTCAGGGGCACGTGTATCCCTGAGCAGTCCTACATCCACAGAATACATCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141003.2 ENSMUST00000141110.8 |
||
| 3UTR CAA 72 bp | CAGGTTGCTGGCAACATTCTGCCCCCTTTTCTTCTCTaGATTCATCCGGCAATCCTCTCTTTGGTTCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QVAGNILPPFLL*IHPAILSLVQP Trigger: GGGCTGAACCAAAGAGAGGATTGCCGGATGAATCAAGAGAAGAAAAGGGGGCAGAATGTTGCCAGCAACCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR TCA 90 bp | GGGATGTATTCTGTGGATGTAGGACTGCTCAGGGATACACGTGCCCCTGAAAGGGAACACATTTCACATTaGTGCCAGGGCACACAAACT | + |
|
Preference number: 4 (lower is better) Translates to: GMYSVDVGLLRDTRAPEREHISH*CQGTQT Trigger: AGTTTGTGTGCCCTGGCATCAATGTGAAATGTGTTC...CCTTTCAGGGGCACGTGTATCCCTGAGCAGTCCTACATCCACAGAATACATCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141003.2 |
||
| CDS-3UTR GCA 90 bp | GGGATGCATGGATGGAAGGACAAGGTAGCCTTCAAAGCAGTGAAATGGGACAGTACCACTGCCATCAACTaGAGTGTCTGGAGTTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GMHGWKDKVAFKAVKWDSTTAIN*SVWSCH Trigger: GTGACAACTCCAGACACTGCAGTTGATGGCAGTGGT...ACTGTCCCATTTCACTGCTTTGAAGGCTACCTTGTCCTTCCATCCATGCATCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR GCA 90 bp | ACTGGCCCACATCCCCCAAAGCAAATGACATCTGGGGCTTGTGCCAAGGAAAGAAGCAGCTGCAGCTGCTaGATTTTCTGTTTCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: TGPHPPKQMTSGACAKERSSCSC*IFCFHV Trigger: AACATGGAAACAGAAAATGCAGCAGCTGCAGCTGCT...TCTTTCCTTGGCACAAGCCCCAGATGTCATTTGCTTTGGGGGATGTGGGCCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR GCA 90 bp | GCCCCTGAAAGGTCAATCTTCGTGCTGCGGCAAGTATTAGAGCAGACCTTGTCAAGCAGCAGCTGCAGCTaGTGCATTTTCTGTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: APERSIFVLRQVLEQTLSSSSCS*CIFCFH Trigger: ATGGAAACAGAAAATGCAGCAGCTGCAGCTGCTGCT...TGACAAGGTCTGCTCTAATACTTGCCGCAGCACGAAGATTGACCTTTCAGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000141003.2 ENSMUST00000141110.8 |
||
| CDS-3UTR GCA 90 bp | GACCAACCCACCACTCTAAACAGCCTTACATACCCCGGAGCTCTCAGGATAGAGAGCATGCCAAAGTTTTaGACGATGTTGTTGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DQPTTLNSLTYPGALRIESMPKF*TMLLRR Trigger: CCTCCTCAACAACATCGTGCAAAACTTTGGCATGCT...CTCTATCCTGAGAGCTCCGGGGTATGTAAGGCTGTTTAGAGTGGTGGGTTGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| CDS-3UTR CCA 90 bp | GGGATGCATGGATGGAAGGACAAGGTAGCCTTCAAAGCAGTGAAATGGGACAGTTCTGACACTTGTGGCTaGCCAGTACCTTCTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GMHGWKDKVAFKAVKWDSSDTCG*PVPSSP Trigger: TGGTGAAGAAGGTACTGGCCAGCCACAAGTGTCAGA...ACTGTCCCATTTCACTGCTTTGAAGGCTACCTTGTCCTTCCATCCATGCATCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| CDS-3UTR TCA 90 bp | GTCAATCTTCGTGCTGCGGCAAGTATTAGAGCAGACCTTGTCATGCTGGTAGAAGTCAAATCACCCCCATaGGGAGCTAGGTTCGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VNLRAAASIRADLVMLVEVKSPP*GARFVV Trigger: AACAACGAACCTAGCTCCTCATGGGGGTGATTTGAC...TTCTACCAGCATGACAAGGTCTGCTCTAATACTTGCCGCAGCACGAAGATTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000141003.2 ENSMUST00000141110.8 |
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| CDS-3UTR TCA 90 bp | GTACTAACAGGTGGTGGGGCAGTGATAACACTTCCTCTCCCAGAACTGAGGGTTGAACACATTTCACATTaGTGCCAGGGCACACAAACT | + |
|
Preference number: 4 (lower is better) Translates to: VLTGGGAVITLPLPELRVEHISH*CQGTQT Trigger: AGTTTGTGTGCCCTGGCATCAATGTGAAATGTGTTC...AACCCTCAGTTCTGGGAGAGGAAGTGTTATCACTGCCCCACCACCTGTTAGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| CDS-3UTR GCA 90 bp | CTCCAAATGAGGTTAGCTCTGCTGTCTCCGCAAGTGATGGGGTACACAATTTCAACCACTGCCATCAACTaGAGTGTCTGGAGTTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LQMRLALLSPQVMGYTISTTAIN*SVWSCH Trigger: GTGACAACTCCAGACACTGCAGTTGATGGCAGTGGT...TGAAATTGTGTACCCCATCACTTGCGGAGACAGCAGAGCTAACCTCATTTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| CDS-3UTR GCA 90 bp | AAGAGACAACTTAGGACTATCCCAGGACATCCTTTACCAAGAGGCCAAAACTTTTGTTCATCACACTGCTaGTCCAGGGCTGCCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KRQLRTIPGHPLPRGQNFCSSHC*SRAARS Trigger: GGACCTGGCAGCCCTGGAGCAGCAGTGTGATGAACA...AAAGTTTTGGCCTCTTGGTAAAGGATGTCCTGGGATAGTCCTAAGTTGTCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| CDS-3UTR GCA 90 bp | ATGTATTCTGTGGATGTAGGACTGCTCAGGGATACACGTGCCCCTGAAAGGTCAAGCAGCTGCAGCTGCTaGATTTTCTGTTTCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: MYSVDVGLLRDTRAPERSSSCSC*IFCFHV Trigger: AACATGGAAACAGAAAATGCAGCAGCTGCAGCTGCT...TGACCTTTCAGGGGCACGTGTATCCCTGAGCAGTCCTACATCCACAGAATACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000141003.2 ENSMUST00000141110.8 |
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| CDS-3UTR GCA 90 bp | CTGGCCATACTGAACCAACAGAGAACTGTGGGAAGAGACCAAATCCATAGGATCACTCAAAGCAATCTGTaGAGACTGTGTGAGCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LAILNQQRTVGRDQIHRITQSNL*RLCEHL Trigger: CAGGTGCTCACACAGTCTGCACAGATTGCTTTGAGT...GATCCTATGGATTTGGTCTCTTCCCACAGTTCTCTGTTGGTTCAGTATGGCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| CDS-3UTR CCA 90 bp | CTGGCCATACTGAACCAACAGAGAACTGTGGGAAGAGACCAAATCCATAGGATCATCAACTGCAGTGTCTaGAGTTGTCACAACCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LAILNQQRTVGRDQIHRIINCSV*SCHNHH Trigger: GTGGTGGTTGTGACAACTCCAGACACTGCAGTTGAT...GATCCTATGGATTTGGTCTCTTCCCACAGTTCTCTGTTGGTTCAGTATGGCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| CDS-3UTR CCA 90 bp | AAGAGACAACTTAGGACTATCCCAGGACATCCTTTACCAAGAGGCCAAAACTTTGACTGTGTGAGCACCTaGGAAGCCATAGCAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KRQLRTIPGHPLPRGQNFDCVST*EAIAAG Trigger: ACCAGCTGCTATGGCTTCCCAGGTGCTCACACAGTC...AAAGTTTTGGCCTCTTGGTAAAGGATGTCCTGGGATAGTCCTAAGTTGTCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| CDS-3UTR TCA 90 bp | GGGATGCATGGATGGAAGGACAAGGTAGCCTTCAAAGCAGTGAAATGGGACAGTTCCTCTAGCTCCTGTTaGAATTCCTGTATGACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GMHGWKDKVAFKAVKWDSSSSSC*NSCMTS Trigger: TGAAGTCATACAGGAATTTCAACAGGAGCTAGAGGA...ACTGTCCCATTTCACTGCTTTGAAGGCTACCTTGTCCTTCCATCCATGCATCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| CDS-3UTR CCA 90 bp | AGGATCTATGGCTTCCACACTCAGGCATGCTGCCTAAGACATGTGTCAATAATGTGCCATTCATCCGGATaGCTCTCTTCCAATCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RIYGFHTQACCLRHVSIMCHSSG*LSSNPS Trigger: TGAAGGATTGGAAGAGAGCCATCCGGATGAATGGCA...CATTATTGACACATGTCTTAGGCAGCATGCCTGAGTGTGGAAGCCATAGATCCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
||
| CDS-3UTR TCA 90 bp | AAGAGACAACTTAGGACTATCCCAGGACATCCTTTACCAAGAGGCCAAAACTTTTTTGCACGATGTTGTTaGGGAGGACAGCATCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: KRQLRTIPGHPLPRGQNFFARCC*GGQHLG Trigger: TCCGAGATGCTGTCCTCCTCAACAACATCGTGCAAA...AAAGTTTTGGCCTCTTGGTAAAGGATGTCCTGGGATAGTCCTAAGTTGTCTCTT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| CDS-3UTR TCA 90 bp | GTCAATCTTCGTGCTGCGGCAAGTATTAGAGCAGACCTTGTCATGCTGGTAGAAATACTGACCCTCACCTaGACACATTTCACATTGATG | + |
|
Preference number: 4 (lower is better) Translates to: VNLRAAASIRADLVMLVEILTLT*THFTLM Trigger: CATCAATGTGAAATGTGTTCAGGTGAGGGTCAGTAT...TTCTACCAGCATGACAAGGTCTGCTCTAATACTTGCCGCAGCACGAAGATTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141003.2 |
||
| CDS-3UTR GCA 90 bp | CTTGCTAAACACATACAAAGTAGAACTCAAAGAACTCAAACTTGCCCTTCTGCGGCATTGTCACAATGGTaGTGCCTGCAGGTGATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LAKHIQSRTQRTQTCPSAALSQW*CLQVMP Trigger: AGGCATCACCTGCAGGCAGCACCATTGTGACAATGC...CGCAGAAGGGCAAGTTTGAGTTCTTTGAGTTCTACTTTGTATGTGTTTAGCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| CDS-3UTR TCA 90 bp | CTTGCTAAACACATACAAAGTAGAACTCAAAGAACTCAAACTTGCCCTTCTGCGGTCAAATCACCCCCATaGGGAGCTAGGTTCGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LAKHIQSRTQRTQTCPSAVKSPP*GARFVV Trigger: AACAACGAACCTAGCTCCTCATGGGGGTGATTTGAC...CGCAGAAGGGCAAGTTTGAGTTCTTTGAGTTCTACTTTGTATGTGTTTAGCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| CDS-3UTR CCA 90 bp | CTTGCTAAACACATACAAAGTAGAACTCAAAGAACTCAAACTTGCCCTTCTGCGGGACACAGGCATTCCTaGACTCAAAGCAATCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LAKHIQSRTQRTQTCPSAGHRHS*TQSNLC Trigger: GCACAGATTGCTTTGAGTCCAGGAATGCCTGTGTCC...CGCAGAAGGGCAAGTTTGAGTTCTTTGAGTTCTACTTTGTATGTGTTTAGCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| 3UTR CAA 72 bp | CTATCCCAGGACATCCTTTACCAAGAGGCCAAAACTTaGTTCCCTGAATTGTTTGGCTCCAAAAACTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSQDILYQEAKT*FPELFGSKNSC Trigger: GCAAGAGTTTTTGGAGCCAAACAATTCAGGGAACAAAGTTTTGGCCTCTTGGTAAAGGATGTCCTGGGATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| CDS-3UTR CCA 90 bp | TCTAAGGGGCAAGGGCCAAAAATGTTTCAACCTTGCTCTTATGAAGAAAGGGAAGTGCACAAACTCCTTTaGGCTGATCACATGTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: SKGQGPKMFQPCSYEEREVHKLL*ADHMFI Trigger: GATGAACATGTGATCAGCCCAAAGGAGTTTGTGCAC...TTCCCTTTCTTCATAAGAGCAAGGTTGAAACATTTTTGGCCCTTGCCCCTTAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| CDS-3UTR CAA 90 bp | GTGCCTCCTGGGCAGGCATGGAAAGGAGCTTGCACCCTCTGCAAAACCAAATCCCTGAGGTGCTGGGACTaGTGCTTCAGCTCCTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VPPGQAWKGACTLCKTKSLRCWD*CFSSLA Trigger: TGCCAAGGAGCTGAAGCACAAGTCCCAGCACCTCAG...GGATTTGGTTTTGCAGAGGGTGCAAGCTCCTTTCCATGCCTGCCCAGGAGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| CDS-3UTR CAA 90 bp | TGCTGCCTAAGACATGTGTCAATAATGTCCCAGCAGGCTCAGCCCCATGGGGGTTTGTGCTTCAGCTCCTaGGCACGGCGGCGATGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: CCLRHVSIMSQQAQPHGGLCFSS*ARRRCS Trigger: TGAACATCGCCGCCGTGCCAAGGAGCTGAAGCACAA...ACCCCCATGGGGCTGAGCCTGCTGGGACATTATTGACACATGTCTTAGGCAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| CDS-3UTR CAA 90 bp | GTGCCTCCTGGGCAGGCATGGAAAGGAGCTTGCACCCTCTGCAAAACCAAATCCAGTGTAGATACTACTTaGCCCAGTGGCACACTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VPPGQAWKGACTLCKTKSSVDTT*PSGTLV Trigger: GACCAGTGTGCCACTGGGCAAAGTAGTATCTACACT...GGATTTGGTTTTGCAGAGGGTGCAAGCTCCTTTCCATGCCTGCCCAGGAGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| CDS-3UTR CAA 90 bp | GTTCCCGGGAACGATCCATCTGACACTTGTGGCTGGCCAGTACCTTCTTCACCATCTAACACGGCTTCCTaGAGCTGTGAGGAGGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: VPGNDPSDTCGWPVPSSPSNTAS*SCEEAV Trigger: TACAGCCTCCTCACAGCTCAAGGAAGCCGTGTTAGA...TGGTGAAGAAGGTACTGGCCAGCCACAAGTGTCAGATGGATCGTTCCCGGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141110.8 |
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| CDS CCA 90 bp | CACTGTCTTCACTTCCTCTACACCACTGCCATCAACTGCAGTGTCTaGAGTTGTCACAACCACCACCTCCTCCATGTGGACGCTCACATC | + |
|
Preference number: 5 (lower is better) Translates to: HCLHFLYTTAINCSV*SCHNHHLLHVDAHI Trigger: GATGTGAGCGTCCACATGGAGGAGGTGGTGGTTGTGACAACTCCAGACACTGCAGTTGATGGCAGTGGTGTAGAGGAAGTGAAGACAGTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049032.13 ENSMUST00000130475.8 ENSMUST00000141003.2 ENSMUST00000141110.8 |
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| CDS-3UTR CAA 90 bp | AGAACTCAAAGAACTCAAACTTGCCCTTCTGCGTGCCTCCTGGGCAGGCATGGAACTAACACGGCTTCCTaGAGCTGTGAGGAGGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RTQRTQTCPSACLLGRHGTNTAS*SCEEAV Trigger: TACAGCCTCCTCACAGCTCAAGGAAGCCGTGTTAGT...TCCATGCCTGCCCAGGAGGCACGCAGAAGGGCAAGTTTGAGTTCTTTGAGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| CDS-3UTR CAA 90 bp | AGCTGCAGCTGGTGTGAGTGGGATGTATTCTGTGGATGTAGGACTGCTCAGGGAACTAACACGGCTTCCTaGAGCTGTGAGGAGGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SCSWCEWDVFCGCRTAQGTNTAS*SCEEAV Trigger: TACAGCCTCCTCACAGCTCAAGGAAGCCGTGTTAGT...TCCCTGAGCAGTCCTACATCCACAGAATACATCCCACTCACACCAGCTGCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141003.2 |
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| CDS-3UTR CAA 90 bp | TCTAAGGGGCAAGGGCCAAAAATGTTTCAACCTTGCTCTTATGAAGAAAGGGAAACTGGCTGGGGCAGCTaGAGGAGAGCCCTTGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SKGQGPKMFQPCSYEERETGWGS*RRALAQ Trigger: CTGGGCAAGGGCTCTCCTCAAGCTGCCCCAGCCAGT...TTCCCTTTCTTCATAAGAGCAAGGTTGAAACATTTTTGGCCCTTGCCCCTTAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| CDS GCA 90 bp | TGTTACAAGCACTGTCTTCACTTCCTCTACACCACTGCCATCAACTaGAGTGTCTGGAGTTGTCACAACCACCACCTCCTCCATGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: CYKHCLHFLYTTAIN*SVWSCHNHHLLHVD Trigger: GTCCACATGGAGGAGGTGGTGGTTGTGACAACTCCAGACACTGCAGTTGATGGCAGTGGTGTAGAGGAAGTGAAGACAGTGCTTGTAACA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049032.13 ENSMUST00000130475.8 ENSMUST00000141003.2 ENSMUST00000141110.8 |
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| CDS-3UTR CAA 90 bp | GTACTAACAGGTGGTGGGGCAGTGATAACACTTCCTCTCCCAGAACTGAGGGTTTTTTGCACGATGTTGTaGAGGAGGACAGCATCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: VLTGGGAVITLPLPELRVFCTML*RRTASR Trigger: CCGAGATGCTGTCCTCCTCAACAACATCGTGCAAAA...AACCCTCAGTTCTGGGAGAGGAAGTGTTATCACTGCCCCACCACCTGTTAGTAC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| CDS GCA 90 bp | CTAGGTTCGTTGTTACAAGCACTGTCTTCACTTCCTCTACACCACTaGCATCAACTGCAGTGTCTGGAGTTGTCACAACCACCACCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LGSLLQALSSLPLHH*HQLQCLELSQPPPP Trigger: AGGAGGTGGTGGTTGTGACAACTCCAGACACTGCAGTTGATGGCAGTGGTGTAGAGGAAGTGAAGACAGTGCTTGTAACAACGAACCTAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049032.13 ENSMUST00000130475.8 ENSMUST00000141003.2 ENSMUST00000141110.8 |
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| CDS-3UTR CAA 90 bp | CTTGCTAAACACATACAAAGTAGAACTCAAAGAACTCAAACTTGCCCTTCTGCGAGCGTCATGAGCACATaGCTGAGGTGCTGGGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: LAKHIQSRTQRTQTCPSASVMST*LRCWDL Trigger: CAAGTCCCAGCACCTCAGCAATGTGCTCATGACGCT...CGCAGAAGGGCAAGTTTGAGTTCTTTGAGTTCTACTTTGTATGTGTTTAGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| CDS TCA 90 bp | GCTGCATTTTCTGTTTCCATGTTATCTTCTGTCAAATCACCCCCATaGGGAGCTAGGTTCGTTGTTACAAGCACTGTCTTCACTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AAFSVSMLSSVKSPP*GARFVVTSTVFTSS Trigger: AGAGGAAGTGAAGACAGTGCTTGTAACAACGAACCTAGCTCCTCATGGGGGTGATTTGACAGAAGATAACATGGAAACAGAAAATGCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049032.13 ENSMUST00000130475.8 ENSMUST00000141003.2 ENSMUST00000141110.8 |
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| CDS CCA 90 bp | CCAATCCTTCAAGGTAGATTTCCCTGCCAGGTGCACAAACTCCTTTaGGCTGATCACATGTTCATCATACTGAACACATTTCACATTGAT | + |
|
Preference number: 5 (lower is better) Translates to: PILQGRFPCQVHKLL*ADHMFIILNTFHID Trigger: ATCAATGTGAAATGTGTTCAGTATGATGAACATGTGATCAGCCCAAAGGAGTTTGTGCACCTGGCAGGGAAATCTACCTTGAAGGATTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049032.13 ENSMUST00000130475.8 |
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| CDS-3UTR CAA 90 bp | CTTGCTAAACACATACAAAGTAGAACTCAAAGAACTCAAACTTGCCCTTCTGCGCAGCATGCCAAAGTTTaGCACGATGTTGTTGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LAKHIQSRTQRTQTCPSAQHAKV*HDVVEE Trigger: CTCCTCAACAACATCGTGCAAAACTTTGGCATGCTG...CGCAGAAGGGCAAGTTTGAGTTCTTTGAGTTCTACTTTGTATGTGTTTAGCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049032.13 |
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| CDS CAA 72 bp | TCCCCCTCTTCAGCCATCTTCACTAACACGGCTTCCTaGAGCTGTGAGGAGGCTGTAAAAGCAGCAGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SPSSAIFTNTAS*SCEEAVKAAAA Trigger: AGCTGCTGCTGCTTTTACAGCCTCCTCACAGCTCAAGGAAGCCGTGTTAGTGAAGATGGCTGAAGAGGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049032.13 ENSMUST00000130475.8 ENSMUST00000141003.2 |
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| CDS GCA 72 bp | CACTGTCTTCACTTCCTCTACACCACTGCCATCAACTaGAGTGTCTGGAGTTGTCACAACCACCACCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: HCLHFLYTTAIN*SVWSCHNHHLL Trigger: GAGGAGGTGGTGGTTGTGACAACTCCAGACACTGCAGTTGATGGCAGTGGTGTAGAGGAAGTGAAGACAGTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049032.13 ENSMUST00000130475.8 ENSMUST00000141003.2 ENSMUST00000141110.8 |
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| CDS CAA 90 bp | CCATGTTATCTTCTGTCAAATCACCCCCATGAGGAGCTAGGTTCGTaGTTACAAGCACTGTCTTCACTTCCTCTACACCACTGCCATCAA | + |
|
Preference number: 6 (lower is better) Translates to: PCYLLSNHPHEELGS*LQALSSLPLHHCHQ Trigger: TTGATGGCAGTGGTGTAGAGGAAGTGAAGACAGTGCTTGTAACAACGAACCTAGCTCCTCATGGGGGTGATTTGACAGAAGATAACATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049032.13 ENSMUST00000130475.8 ENSMUST00000141003.2 ENSMUST00000141110.8 |
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| CDS GCA 72 bp | TTGTTACAAGCACTGTCTTCACTTCCTCTACACCACTaGCATCAACTGCAGTGTCTGGAGTTGTCACAACCA | + |
|
Preference number: 6 (lower is better) Translates to: LLQALSSLPLHH*HQLQCLELSQP Trigger: TGGTTGTGACAACTCCAGACACTGCAGTTGATGGCAGTGGTGTAGAGGAAGTGAAGACAGTGCTTGTAACAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049032.13 ENSMUST00000130475.8 ENSMUST00000141003.2 ENSMUST00000141110.8 |
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| CDS TCA 72 bp | TCTGTTTCCATGTTATCTTCTGTCAAATCACCCCCATaGGGAGCTAGGTTCGTTGTTACAAGCACTGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SVSMLSSVKSPP*GARFVVTSTVF Trigger: GAAGACAGTGCTTGTAACAACGAACCTAGCTCCTCATGGGGGTGATTTGACAGAAGATAACATGGAAACAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049032.13 ENSMUST00000130475.8 ENSMUST00000141003.2 ENSMUST00000141110.8 |
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