Pregenerated sensors for GM2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000594Ensembl transcript IDs: ENSMUST00000000608.8
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGCACCCATGGCCAGAGATGCCTGGACTCCCCTGGACCACCCACTaGGCCCTTCCACAGCCACAGCCCATCACAGACTCCCAAACATGC | + |
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Preference number: 1 (lower is better) Translates to: KHPWPEMPGLPWTTH*ALPQPQPITDSQTC Trigger: GCATGTTTGGGAGTCTGTGATGGGCTGTGGCTGTGGAAGGGCTCAGTGGGTGGTCCAGGGGAGTCCAGGCATCTCTGGCCATGGGTGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR CCA 90 bp | GGCTGTCCGAGGAGGCTCAGGAAGTTGTCATGGTGCAACCTGATGTaGGACCCACTCTCTTCACAGGACCCCTGTTCCACGTGGTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: GCPRRLRKLSWCNLM*DPLSSQDPCSTWWL Trigger: CAGCCACCACGTGGAACAGGGGTCCTGTGAAGAGAGTGGGTCCCACATCAGGTTGCACCATGACAACTTCCTGAGCCTCCTCGGACAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR TCA 90 bp | ACCTGGGCTGTCCGAGGAGGCTCAGGAAGTTGTCATGGTGCAACCTaGTGTGGGACCCACTCTCTTCACAGGACCCCTGTTCCACGTGGT | + |
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Preference number: 1 (lower is better) Translates to: TWAVRGGSGSCHGAT*CGTHSLHRTPVPRG Trigger: ACCACGTGGAACAGGGGTCCTGTGAAGAGAGTGGGTCCCACATCAGGTTGCACCATGACAACTTCCTGAGCCTCCTCGGACAGCCCAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR GCA 90 bp | GTCCAGAACCTGGGCTGTCCGAGGAGGCTCAGGAAGTTGTCATGGTaGAACCTGATGTGGGACCCACTCTCTTCACAGGACCCCTGTTCC | + |
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Preference number: 1 (lower is better) Translates to: VQNLGCPRRLRKLSW*NLMWDPLSSQDPCS Trigger: GGAACAGGGGTCCTGTGAAGAGAGTGGGTCCCACATCAGGTTGCACCATGACAACTTCCTGAGCCTCCTCGGACAGCCCAGGTTCTGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR CCA 90 bp | CCCACTCTCTTCACAGGACCCCTGTTCCACGTGGTGGCTGCTAGGTaGGATCTACTCCAGTGTGAACCCCTCTACTCTGGTGGTGATGGC | + |
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Preference number: 1 (lower is better) Translates to: PTLFTGPLFHVVAAR*DLLQCEPLYSGGDG Trigger: GCCATCACCACCAGAGTAGAGGGGTTCACACTGGAGTAGATCCCACCTAGCAGCCACCACGTGGAACAGGGGTCCTGTGAAGAGAGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR CCA 90 bp | CTGATGTGGGACCCACTCTCTTCACAGGACCCCTGTTCCACGTGGTaGCTGCTAGGTGGGATCTACTCCAGTGTGAACCCCTCTACTCTG | + |
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Preference number: 1 (lower is better) Translates to: LMWDPLSSQDPCSTW*LLGGIYSSVNPSTL Trigger: CAGAGTAGAGGGGTTCACACTGGAGTAGATCCCACCTAGCAGCCACCACGTGGAACAGGGGTCCTGTGAAGAGAGTGGGTCCCACATCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR CCA 90 bp | CTAGTCCAGAACCTGGGCTGTCCGAGGAGGCTCAGGAAGTTGTCATaGTGCAACCTGATGTGGGACCCACTCTCTTCACAGGACCCCTGT | + |
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Preference number: 1 (lower is better) Translates to: LVQNLGCPRRLRKLS*CNLMWDPLSSQDPC Trigger: ACAGGGGTCCTGTGAAGAGAGTGGGTCCCACATCAGGTTGCACCATGACAACTTCCTGAGCCTCCTCGGACAGCCCAGGTTCTGGACTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR CCA 90 bp | AACCTGATGTGGGACCCACTCTCTTCACAGGACCCCTGTTCCACGTaGTGGCTGCTAGGTGGGATCTACTCCAGTGTGAACCCCTCTACT | + |
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Preference number: 1 (lower is better) Translates to: NLMWDPLSSQDPCST*WLLGGIYSSVNPST Trigger: AGTAGAGGGGTTCACACTGGAGTAGATCCCACCTAGCAGCCACCACGTGGAACAGGGGTCCTGTGAAGAGAGTGGGTCCCACATCAGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR GCA 90 bp | CCTTCCACAGCCACAGCCCATCACAGACTCCCAAACATGCAGCCATaGTCAATGAAGCACACAGCCAAGAAAAGGAGCCCACACAGCAAG | + |
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Preference number: 1 (lower is better) Translates to: PSTATAHHRLPNMQP*SMKHTAKKRSPHSK Trigger: CTTGCTGTGTGGGCTCCTTTTCTTGGCTGTGTGCTTCATTGAGCATGGCTGCATGTTTGGGAGTCTGTGATGGGCTGTGGCTGTGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR CCA 90 bp | TCTTCGGCTTGGCCCTACAGGTACCTGTGCTTTGCCAAGGGTTACTaGAGCATGCCCAACAATAACTCTCACAGGTTTCTGTCACACACC | + |
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Preference number: 1 (lower is better) Translates to: SSAWPYRYLCFAKGY*SMPNNNSHRFLSHT Trigger: GGTGTGTGACAGAAACCTGTGAGAGTTATTGTTGGGCATGCTCCAGTAACCCTTGGCAAAGCACAGGTACCTGTAGGGCCAAGCCGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR CCA 90 bp | AATCATCAGACACCCCTTCAGGTTGTCTGCTCCATTCCCTTAATGTaGAGGTTCACGCCTTTGATTCCAGCACTCAGGAGCCAGAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: NHQTPLQVVCSIPLM*RFTPLIPALRSQRQ Trigger: CTGCCTCTGGCTCCTGAGTGCTGGAATCAAAGGCGTGAACCTCCACATTAAGGGAATGGAGCAGACAACCTGAAGGGGTGTCTGATGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR TCA 90 bp | GATACTTGGTTTTTGTGCTATTTTATGCCCAGCTTAACATCCACATaGGACTCTTGTCAGTGGGTGACATTTACTCCTGAGGCTGCTGGC | + |
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Preference number: 1 (lower is better) Translates to: DTWFLCYFMPSLTST*DSCQWVTFTPEAAG Trigger: GCCAGCAGCCTCAGGAGTAAATGTCACCCACTGACAAGAGTCTCATGTGGATGTTAAGCTGGGCATAAAATAGCACAAAAACCAAGTATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR TCA 90 bp | AAGAGAATGCAGTTAATCACAGAAGTTAATAGAGGGACCCAAGACTaGCTACCTAGACCTCTTTGCAGGAAGAGAGGCTCAGGATGGAAT | + |
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Preference number: 1 (lower is better) Translates to: KRMQLITEVNRGTQD*LPRPLCRKRGSGWN Trigger: ATTCCATCCTGAGCCTCTCTTCCTGCAAAGAGGTCTAGGTAGTCAGTCTTGGGTCCCTCTATTAACTTCTGTGATTAACTGCATTCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR TCA 90 bp | CAGGCTGATATATACAGCACTGGGAAACTGGTTTCCATTGTAGGATaGTGTATACCGAGTACCATGAGGGATGATATATACAGGGTTGAG | + |
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Preference number: 1 (lower is better) Translates to: QADIYSTGKLVSIVG*CIPSTMRDDIYRVE Trigger: CTCAACCCTGTATATATCATCCCTCATGGTACTCGGTATACATCATCCTACAATGGAAACCAGTTTCCCAGTGCTGTATATATCAGCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR GCA 90 bp | CATACTAAGAGCATCTCAGAGAAATGGCGCATACCCTTCAGTAACTaGTCATTTTATAGTGTTAGTTTTATAGCCCAGGCTAACTTGAAT | + |
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Preference number: 1 (lower is better) Translates to: HTKSISEKWRIPFSN*SFYSVSFIAQANLN Trigger: ATTCAAGTTAGCCTGGGCTATAAAACTAACACTATAAAATGAGCAGTTACTGAAGGGTATGCGCCATTTCTCTGAGATGCTCTTAGTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGCAACCCTGGGCGTTCAGGCCCAAACAGAGCAAGGCGGAAGCCCCGGCTGCAGAGGGACCCAAGACTaGCTACCTAGACCTCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: KATLGVQAQTEQGGSPGCRGTQD*LPRPLC Trigger: GCAAAGAGGTCTAGGTAGTCAGTCTTGGGTCCCTCT...GCAGCCGGGGCTTCCGCCTTGCTCTGTTTGGGCCTGAACGCCCAGGGTTGCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCCAGAACCTGGGCTGTCCGAGGAGGCTCAGGAAGTTGTCATGGTGCAACCTTGCCATTCCAGACCCTaGCCACCTGGCACCAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: SPEPGLSEEAQEVVMVQPCHSRP*PPGTRA Trigger: TGCTCTGGTGCCAGGTGGCCAGGGTCTGGAATGGCA...AGGTTGCACCATGACAACTTCCTGAGCCTCCTCGGACAGCCCAGGTTCTGGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR-3UTR CCA 90 bp | TTGTCATGGTGCAACCTGATGTGGGACCCACTCTCTTCACAGGACCCCTGTTCCAGAGGCAGGCAGGCCTaGGCACCGGAACACAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: LSWCNLMWDPLSSQDPCSRGRQA*APEHRR Trigger: TCTTCTGTGTTCCGGTGCCCAGGCCTGCCTGCCTCT...GGAACAGGGGTCCTGTGAAGAGAGTGGGTCCCACATCAGGTTGCACCATGACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGCAACCCTGGGCGTTCAGGCCCAAACAGAGCAAGGCGGAAGCCCCGGCTGCGCAACATTCCTTACATaGAACTTGCAGGGGACTGCA | + |
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Preference number: 2 (lower is better) Translates to: KATLGVQAQTEQGGSPGCATFLT*NLQGTA Trigger: TGCAGTCCCCTGCAAGTTCCATGTAAGGAATGTTGC...GCAGCCGGGGCTTCCGCCTTGCTCTGTTTGGGCCTGAACGCCCAGGGTTGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR-3UTR CCA 90 bp | AACATGCAGCCATGCTCAATGAAGCACACAGCCAAGAAAAGGAGCCCACACAGCCCCTGGGTGAGTCCGTaGGGCCCCTTTGGCCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: NMQPCSMKHTAKKRSPHSPWVSP*GPFGLH Trigger: ATGCAGGCCAAAGGGGCCCCACGGACTCACCCAGGG...GCTGTGTGGGCTCCTTTTCTTGGCTGTGTGCTTCATTGAGCATGGCTGCATGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGACACCCCTTCAGGTTGTCTGCTCCATTCCCTTAATGTGGAGGTTCACGCCCGGCTGCTGCTGAGATaGACACAAGCACCCATGGCC | + |
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Preference number: 2 (lower is better) Translates to: SDTPSGCLLHSLNVEVHARLLLR*TQAPMA Trigger: GGCCATGGGTGCTTGTGTTCATCTCAGCAGCAGCCG...GGCGTGAACCTCCACATTAAGGGAATGGAGCAGACAACCTGAAGGGGTGTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAAGCCATGTAGACCTGCTCTAGTGCAGGCTGAGCCCTCTTTGAGGCCAGGCTGTCACACACCACCCTaGCTCTTCAGGATCTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: QKPCRPALVQAEPSLRPGCHTPP*LFRICQ Trigger: CTGACAGATCCTGAAGAGGCAGGGTGGTGTGTGACA...GCCTGGCCTCAAAGAGGGCTCAGCCTGCACTAGAGCAGGTCTACATGGCTTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR CAA 90 bp | TCTCAGAAGCCATGTAGACCTGCTCTAGTGCAGGCTGAGCCCTCTTaGAGGCCAGGCACCAAGGACTTGACCTTGAAGGGGGAAGAGATG | + |
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Preference number: 2 (lower is better) Translates to: SQKPCRPALVQAEPS*RPGTKDLTLKGEEM Trigger: CATCTCTTCCCCCTTCAAGGTCAAGTCCTTGGTGCCTGGCCTCAAAGAGGGCTCAGCCTGCACTAGAGCAGGTCTACATGGCTTCTGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAAGCCATGTAGACCTGCTCTAGTGCAGGCTGAGCCCTCTTTGAGGCCAGGCGAAGATGAACAGATGTaGGGAAAAGCAGCCACCTGG | + |
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Preference number: 2 (lower is better) Translates to: QKPCRPALVQAEPSLRPGEDEQM*GKAATW Trigger: CCAGGTGGCTGCTTTTCCTCACATCTGTTCATCTTC...GCCTGGCCTCAAAGAGGGCTCAGCCTGCACTAGAGCAGGTCTACATGGCTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR-3UTR GCA 90 bp | GCTAAGGGATCTGAAAGCAACCCTGGGCGTTCAGGCCCAAACAGAGCAAGGCGGTCCCTCAGGTCAGGTTaGAATGATTTCCAGAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: AKGSESNPGRSGPNRARRSLRSG*NDFQRG Trigger: CCCTCTCTGGAAATCATTGCAACCTGACCTGAGGGA...CCGCCTTGCTCTGTTTGGGCCTGAACGCCCAGGGTTGCTTTCAGATCCCTTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGCAACCCTGGGCGTTCAGGCCCAAACAGAGCAAGGCGGAAGCCCCGGCTGCACTAAAACAAAGAAGTaGGGTGAGCATAACTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: KATLGVQAQTEQGGSPGCTKTKK*GEHNSR Trigger: CCTGGAGTTATGCTCACCCCACTTCTTTGTTTTAGT...GCAGCCGGGGCTTCCGCCTTGCTCTGTTTGGGCCTGAACGCCCAGGGTTGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR-3UTR CCA 90 bp | AACATGCAGCCATGCTCAATGAAGCACACAGCCAAGAAAAGGAGCCCACACAGCGACCCCTGTTCCACGTaGTGGCTGCTAGGTGGGATC | + |
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Preference number: 2 (lower is better) Translates to: NMQPCSMKHTAKKRSPHSDPCST*WLLGGI Trigger: GATCCCACCTAGCAGCCACCACGTGGAACAGGGGTC...GCTGTGTGGGCTCCTTTTCTTGGCTGTGTGCTTCATTGAGCATGGCTGCATGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR CAA 90 bp | TGTGCCTCCCTAGGTCTTCGGCTTGGCCCTACAGGTACCTGTGCTTaGCCAAGGGTTACTGGAGCATGCCCAACAATAACTCTCACAGGT | + |
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Preference number: 2 (lower is better) Translates to: CASLGLRLGPTGTCA*PRVTGACPTITLTG Trigger: ACCTGTGAGAGTTATTGTTGGGCATGCTCCAGTAACCCTTGGCAAAGCACAGGTACCTGTAGGGCCAAGCCGAAGACCTAGGGAGGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR CAA 90 bp | GTGCAGGCTGAGCCCTCTTTGAGGCCAGGCACCAAGGACTTGACCTaGAAGGGGGAAGAGATGCGGCCAGATAACTTGAGATTGAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: VQAEPSLRPGTKDLT*KGEEMRPDNLRLRR Trigger: TCTTCTCAATCTCAAGTTATCTGGCCGCATCTCTTCCCCCTTCAAGGTCAAGTCCTTGGTGCCTGGCCTCAAAGAGGGCTCAGCCTGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR-3UTR TCA 90 bp | GGTGTGCCAAGACCTTCAAGTGCCCGCTCCCAAAGACCTTATTTCCTTCTTTCTAGGCTGAGCCCTCTTTaGGGCCAGGCACCAAGGACT | + |
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Preference number: 2 (lower is better) Translates to: GVPRPSSARSQRPYFLLSRLSPL*GQAPRT Trigger: AGTCCTTGGTGCCTGGCCTCAAAGAGGGCTCAGCCT...AGAAAGAAGGAAATAAGGTCTTTGGGAGCGGGCACTTGAAGGTCTTGGCACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR-3UTR GCA 90 bp | AGCAGAAACAAAGGAATGGTGTGCCAAGACCTTCAAGTGCCCGCTCCCAAAGACAGAAGAGGCCTGCCGTaGTGGTGCCCCTTCATTCTG | + |
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Preference number: 2 (lower is better) Translates to: SRNKGMVCQDLQVPAPKDRRGLP*WCPFIL Trigger: CAGAATGAAGGGGCACCAGCACGGCAGGCCTCTTCT...GTCTTTGGGAGCGGGCACTTGAAGGTCTTGGCACACCATTCCTTTGTTTCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR-3UTR GCA 90 bp | GATGTGAGGAAAAGCAGCCACCTGGGAGCCAGATTATGTCCCTGGGTGAGTCCGCTACCTAGACCTCTTTaGAGGAAGAGAGGCTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: DVRKSSHLGARLCPWVSPLPRPL*RKRGSG Trigger: TCCTGAGCCTCTCTTCCTGCAAAGAGGTCTAGGTAG...CGGACTCACCCAGGGACATAATCTGGCTCCCAGGTGGCTGCTTTTCCTCACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR-3UTR GCA 90 bp | GATGTGAGGAAAAGCAGCCACCTGGGAGCCAGATTATGTCCCTGGGTGAGTCCGCAGGTACCTGTGCTTTaGCAAGGGTTACTGGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: DVRKSSHLGARLCPWVSPQVPVL*QGLLEH Trigger: ATGCTCCAGTAACCCTTGGCAAAGCACAGGTACCTG...CGGACTCACCCAGGGACATAATCTGGCTCCCAGGTGGCTGCTTTTCCTCACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR-3UTR CCA 90 bp | TTGTCATGGTGCAACCTGATGTGGGACCCACTCTCTTCACAGGACCCCTGTTCCGGGTGCAAAGGAGCATaGCTTACAGCCCATCAGATG | + |
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Preference number: 2 (lower is better) Translates to: LSWCNLMWDPLSSQDPCSGCKGA*LTAHQM Trigger: CATCTGATGGGCTGTAAGCCATGCTCCTTTGCACCC...GGAACAGGGGTCCTGTGAAGAGAGTGGGTCCCACATCAGGTTGCACCATGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR-3UTR GCA 90 bp | AACATGCAGCCATGCTCAATGAAGCACACAGCCAAGAAAAGGAGCCCACACAGCCGGAAGTTGGCACAGTaGCCAGCTCTCAGAAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: NMQPCSMKHTAKKRSPHSRKLAQ*PALRSH Trigger: ATGGCTTCTGAGAGCTGGGCACTGTGCCAACTTCCG...GCTGTGTGGGCTCCTTTTCTTGGCTGTGTGCTTCATTGAGCATGGCTGCATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCACTGGGAAACTGGTTTCCATTGTAGGATGATGTATACCGAGTACCATGAGGATTATGTCCCTGGGTaGGTCCGTGGGGCCCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: QHWETGFHCRMMYTEYHEDYVPG*VRGAPL Trigger: CAAAGGGGCCCCACGGACTCACCCAGGGACATAATC...CTCATGGTACTCGGTATACATCATCCTACAATGGAAACCAGTTTCCCAGTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR-3UTR GCA 90 bp | AGCAGAAACAAAGGAATGGTGTGCCAAGACCTTCAAGTGCCCGCTCCCAAAGACGCTCCCAGAAGTGATTaGTGTGCCTCCCTAGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: SRNKGMVCQDLQVPAPKDAPRSD*CASLGL Trigger: AAGACCTAGGGAGGCACAGCAATCACTTCTGGGAGC...GTCTTTGGGAGCGGGCACTTGAAGGTCTTGGCACACCATTCCTTTGTTTCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGACACCCCTTCAGGTTGTCTGCTCCATTCCCTTAATGTGGAGGTTCACGCCCCAAACATGCAGCCATaGTCAATGAAGCACACAGCC | + |
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Preference number: 2 (lower is better) Translates to: SDTPSGCLLHSLNVEVHAPNMQP*SMKHTA Trigger: GGCTGTGTGCTTCATTGAGCATGGCTGCATGTTTGG...GGCGTGAACCTCCACATTAAGGGAATGGAGCAGACAACCTGAAGGGGTGTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR-3UTR CCA 90 bp | ACGTGGTGGCTGCTAGGTGGGATCTACTCCAGTGTGAACCCCTCTACTCTGGTGAGGAAAAAGGAAAAATaGGCATCGCTCCCAGAAGTG | + |
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Preference number: 2 (lower is better) Translates to: TWWLLGGIYSSVNPSTLVRKKEK*ASLPEV Trigger: CACTTCTGGGAGCGATGCCCATTTTTCCTTTTTCCT...CACCAGAGTAGAGGGGTTCACACTGGAGTAGATCCCACCTAGCAGCCACCACGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR-3UTR GCA 90 bp | TTGTCATGGTGCAACCTGATGTGGGACCCACTCTCTTCACAGGACCCCTGTTCCGTCAGGTATAAGGAATaGCATCCCATTCTTGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: LSWCNLMWDPLSSQDPCSVRYKE*HPILEG Trigger: GCCTTCAAGAATGGGATGGCATTCCTTATACCTGAC...GGAACAGGGGTCCTGTGAAGAGAGTGGGTCCCACATCAGGTTGCACCATGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR-3UTR CCA 90 bp | TCAAATGTCACATCACCTGTCATTAATGCTAAGACCCTCCACAGCCACACCCACCCAGGAGGTCCAGGTTaGGCCAGTTTTGACCTTAGG | + |
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Preference number: 2 (lower is better) Translates to: SNVTSPVINAKTLHSHTHPGGPG*ASFDLR Trigger: CCTAAGGTCAAAACTGGCCCAACCTGGACCTCCTGG...GTGGGTGTGGCTGTGGAGGGTCTTAGCATTAATGACAGGTGATGTGACATTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR CAA 90 bp | CAGCCTAGACTAGATAGAATGAGACCCTGCCTCTCAGTAGCAGATTaGCCTTACAAATTTGAGGACCAGAGTTCGGGTCCCCAGAACCAT | + |
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Preference number: 2 (lower is better) Translates to: QPRLDRMRPCLSVAD*PYKFEDQSSGPQNH Trigger: ATGGTTCTGGGGACCCGAACTCTGGTCCTCAAATTTGTAAGGCAAATCTGCTACTGAGAGGCAGGGTCTCATTCTATCTAGTCTAGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGACACCCCTTCAGGTTGTCTGCTCCATTCCCTTAATGTGGAGGTTCACGCCATGCTCACCTCATTGTaGGCAGTAAGCAGAAACAAA | + |
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Preference number: 2 (lower is better) Translates to: SDTPSGCLLHSLNVEVHAMLTSL*AVSRNK Trigger: TTTGTTTCTGCTTACTGCCCACAATGAGGTGAGCAT...GGCGTGAACCTCCACATTAAGGGAATGGAGCAGACAACCTGAAGGGGTGTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR-3UTR CCA 90 bp | AGCAGAAACAAAGGAATGGTGTGCCAAGACCTTCAAGTGCCCGCTCCCAAAGACAAGAGAGGCTCAGGATaGAATGAGAAATTAATACGG | + |
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Preference number: 2 (lower is better) Translates to: SRNKGMVCQDLQVPAPKDKRGSG*NEKLIR Trigger: CCGTATTAATTTCTCATTCCATCCTGAGCCTCTCTT...GTCTTTGGGAGCGGGCACTTGAAGGTCTTGGCACACCATTCCTTTGTTTCTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR-3UTR TCA 90 bp | AAACAGTGCAGATACTTGGTTTTTGTGCTATTTTATGCCCAGCTTAACATCCACCAAGACTGGGCATGGTaGCACACACCCTTAACCCTA | + |
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Preference number: 2 (lower is better) Translates to: KQCRYLVFVLFYAQLNIHQDWAW*HTPLTL Trigger: TAGGGTTAAGGGTGTGTGTCACCATGCCCAGTCTTG...GTGGATGTTAAGCTGGGCATAAAATAGCACAAAAACCAAGTATCTGCACTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCACTGGGAAACTGGTTTCCATTGTAGGATGATGTATACCGAGTACCATGAGATAAACGGCTGGGTTTaGGGCCTAAGGAAGAAAAAT | + |
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Preference number: 2 (lower is better) Translates to: QHWETGFHCRMMYTEYHEINGWV*GLRKKN Trigger: ATTTTTCTTCCTTAGGCCCCAAACCCAGCCGTTTAT...CTCATGGTACTCGGTATACATCATCCTACAATGGAAACCAGTTTCCCAGTGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR-3UTR TCA 90 bp | TTGACTGTTTTGGATACGAAAGAAATTCTTAGAAAGTTGGTAGGGGTGCAAAGGCAGGTCAGGTTGCAATaGTTTCCAGAGAGGGTAGAG | + |
|
Preference number: 2 (lower is better) Translates to: LTVLDTKEILRKLVGVQRQVRLQ*FPERVE Trigger: CTCTACCCTCTCTGGAAATCATTGCAACCTGACCTG...CCTTTGCACCCCTACCAACTTTCTAAGAATTTCTTTCGTATCCAAAACAGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR GCA 72 bp | GGCAGGCCTGGGCACCGGAACACAGAAGAAGAGGCCTaGCGTGCTGGTGCCCCTTCATTCTGTGGTGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GRPGHRNTEEEA*RAGAPSFCGGC Trigger: GCAGCCACCACAGAATGAAGGGGCACCAGCACGGCAGGCCTCTTCTTCTGTGTTCCGGTGCCCAGGCCTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR GCA 72 bp | GCCTGGGCACCGGAACACAGAAGAAGAGGCCTGCCGTaGTGGTGCCCCTTCATTCTGTGGTGGCTGCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: AWAPEHRRRGLP*WCPFILWWLLP Trigger: TGGCAGCAGCCACCACAGAATGAAGGGGCACCAGCACGGCAGGCCTCTTCTTCTGTGTTCCGGTGCCCAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR GCA 72 bp | GCTGCTGAGATGAACACAAGCACCCATGGCCAGAGATaGCTGGACTCCCCTGGACCACCCACTGAGCCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: AAEMNTSTHGQR*LDSPGPPTEPF Trigger: GAAGGGCTCAGTGGGTGGTCCAGGGGAGTCCAGGCATCTCTGGCCATGGGTGCTTGTGTTCATCTCAGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR TCA 72 bp | AACAGAGCAAGGCGGAAGCCCCGGCTGCTGCTGAGATaGACACAAGCACCCATGGCCAGAGATGCCTGGACT | + |
|
Preference number: 3 (lower is better) Translates to: NRARRKPRLLLR*TQAPMARDAWT Trigger: AGTCCAGGCATCTCTGGCCATGGGTGCTTGTGTTCATCTCAGCAGCAGCCGGGGCTTCCGCCTTGCTCTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR CCA 72 bp | GACCCACTCTCTTCACAGGACCCCTGTTCCACGTGGTaGCTGCTAGGTGGGATCTACTCCAGTGTGAACCCC | + |
|
Preference number: 3 (lower is better) Translates to: DPLSSQDPCSTW*LLGGIYSSVNP Trigger: GGGGTTCACACTGGAGTAGATCCCACCTAGCAGCCACCACGTGGAACAGGGGTCCTGTGAAGAGAGTGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGTCATGGTGCAACCTGATGTGGGACCCACTCTCTTCACAGGACCCCTGTTCCCAGGCTGAGCCCTCTTaGAGGCCAGGCACCAAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LSWCNLMWDPLSSQDPCSQAEPS*RPGTKD Trigger: GTCCTTGGTGCCTGGCCTCAAAGAGGGCTCAGCCTG...GGAACAGGGGTCCTGTGAAGAGAGTGGGTCCCACATCAGGTTGCACCATGACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR TCA 72 bp | AAAGCAGCCACCTGGGAGCCAGATTATGTCCCTGGGTaGGTCCGTGGGGCCCCTTTGGCCTGCATAGTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: KAATWEPDYVPG*VRGAPLACIVS Trigger: ACTTACTATGCAGGCCAAAGGGGCCCCACGGACTCACCCAGGGACATAATCTGGCTCCCAGGTGGCTGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR CCA 72 bp | TGGGACCCACTCTCTTCACAGGACCCCTGTTCCACGTaGTGGCTGCTAGGTGGGATCTACTCCAGTGTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: WDPLSSQDPCST*WLLGGIYSSVN Trigger: GTTCACACTGGAGTAGATCCCACCTAGCAGCCACCACGTGGAACAGGGGTCCTGTGAAGAGAGTGGGTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR TCA 72 bp | GTCCGAGGAGGCTCAGGAAGTTGTCATGGTGCAACCTaGTGTGGGACCCACTCTCTTCACAGGACCCCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: VRGGSGSCHGAT*CGTHSLHRTPV Trigger: AACAGGGGTCCTGTGAAGAGAGTGGGTCCCACATCAGGTTGCACCATGACAACTTCCTGAGCCTCCTCGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR CCA 72 bp | AGGAGGCTCAGGAAGTTGTCATGGTGCAACCTGATGTaGGACCCACTCTCTTCACAGGACCCCTGTTCCACG | + |
|
Preference number: 3 (lower is better) Translates to: RRLRKLSWCNLM*DPLSSQDPCST Trigger: CGTGGAACAGGGGTCCTGTGAAGAGAGTGGGTCCCACATCAGGTTGCACCATGACAACTTCCTGAGCCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR CCA 72 bp | AACCTGGGCTGTCCGAGGAGGCTCAGGAAGTTGTCATaGTGCAACCTGATGTGGGACCCACTCTCTTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: NLGCPRRLRKLS*CNLMWDPLSSQ Trigger: CTGTGAAGAGAGTGGGTCCCACATCAGGTTGCACCATGACAACTTCCTGAGCCTCCTCGGACAGCCCAGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGAAACAAAGGAATGGTGTGCCAAGACCTTCAAGTGCCCGCTCCCAAAGACACAGCCCATCAGATGTaGGGCCTGGTCCATCCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SRNKGMVCQDLQVPAPKDTAHQM*GLVHPP Trigger: GGGAGGATGGACCAGGCCCAACATCTGATGGGCTGT...GTCTTTGGGAGCGGGCACTTGAAGGTCTTGGCACACCATTCCTTTGTTTCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR TCA 72 bp | ATTCCAGCACTCAGGAGCCAGAGGCAGGTGGGTCCCTaGGTTCAGGGTCATCTTGGTCTACACAGTGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: IPALRSQRQVGP*VQGHLGLHSEF Trigger: GAACTCACTGTGTAGACCAAGATGACCCTGAACTCAGGGACCCACCTGCCTCTGGCTCCTGAGTGCTGGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR GCA 72 bp | GCCACAGCCCATCACAGACTCCCAAACATGCAGCCATaGTCAATGAAGCACACAGCCAAGAAAAGGAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: ATAHHRLPNMQP*SMKHTAKKRSP Trigger: TGGGCTCCTTTTCTTGGCTGTGTGCTTCATTGAGCATGGCTGCATGTTTGGGAGTCTGTGATGGGCTGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR-3UTR CAA 90 bp | AACATGCAGCCATGCTCAATGAAGCACACAGCCAAGAAAAGGAGCCCACACAGCGTCCGTGGGGCCCCTTaGGCCTGCATAGTAAGTATA | + |
|
Preference number: 3 (lower is better) Translates to: NMQPCSMKHTAKKRSPHSVRGAP*ACIVSI Trigger: TATACTTACTATGCAGGCCAAAGGGGCCCCACGGAC...GCTGTGTGGGCTCCTTTTCTTGGCTGTGTGCTTCATTGAGCATGGCTGCATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAAATGTCACATCACCTGTCATTAATGCTAAGACCCTCCACAGCCACACCCACGTGATGGCTCGGAAGTaGGCACAGTGCCCAGCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SNVTSPVINAKTLHSHTHVMARK*AQCPAL Trigger: GAGAGCTGGGCACTGTGCCAACTTCCGAGCCATCAC...GTGGGTGTGGCTGTGGAGGGTCTTAGCATTAATGACAGGTGATGTGACATTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR TCA 72 bp | AAAGGAAAAAGGAAAAATGGGCATCGCTCCCAGAAGTaGTTGCTGTGCCTCCCTAGGTCTTCGGCTTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: KGKRKNGHRSQK*LLCLPRSSAWP Trigger: GGGCCAAGCCGAAGACCTAGGGAGGCACAGCAATCACTTCTGGGAGCGATGCCCATTTTTCCTTTTTCCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR GCA 72 bp | GAAAAAGGAAAAATGGGCATCGCTCCCAGAAGTGATTaGTGTGCCTCCCTAGGTCTTCGGCTTGGCCCTACA | + |
|
Preference number: 3 (lower is better) Translates to: EKGKMGIAPRSD*CASLGLRLGPT Trigger: TGTAGGGCCAAGCCGAAGACCTAGGGAGGCACAGCAATCACTTCTGGGAGCGATGCCCATTTTTCCTTTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAAATGTCACATCACCTGTCATTAATGCTAAGACCCTCCACAGCCACACCCACCCAGGCACCAAGGACTaGACCTTGAAGGGGGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SNVTSPVINAKTLHSHTHPGTKD*TLKGEE Trigger: CTCTTCCCCCTTCAAGGTCAAGTCCTTGGTGCCTGG...GTGGGTGTGGCTGTGGAGGGTCTTAGCATTAATGACAGGTGATGTGACATTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR CCA 72 bp | TGGCCCTACAGGTACCTGTGCTTTGCCAAGGGTTACTaGAGCATGCCCAACAATAACTCTCACAGGTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: WPYRYLCFAKGY*SMPNNNSHRFL Trigger: CAGAAACCTGTGAGAGTTATTGTTGGGCATGCTCCAGTAACCCTTGGCAAAGCACAGGTACCTGTAGGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR GCA 72 bp | TCATTGTGGGCAGTAAGCAGAAACAAAGGAATGGTGTaGCAAGACCTTCAAGTGCCCGCTCCCAAAGACCTT | + |
|
Preference number: 3 (lower is better) Translates to: SLWAVSRNKGMV*QDLQVPAPKDL Trigger: AAGGTCTTTGGGAGCGGGCACTTGAAGGTCTTGGCACACCATTCCTTTGTTTCTGCTTACTGCCCACAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR GCA 72 bp | CCAGGGATTAATCATCAGACACCCCTTCAGGTTGTCTaGTCCATTCCCTTAATGTGGAGGTTCACGCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: PGINHQTPLQVV*SIPLMWRFTPL Trigger: CAAAGGCGTGAACCTCCACATTAAGGGAATGGAGCAGACAACCTGAAGGGGTGTCTGATGATTAATCCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR CCA 72 bp | AGAAGTGGGGTGAGCATAACTCCAGGAGGTCCAGGTTaGGCCAGTTTTGACCTTAGGATTCCCAAACATGTT | + |
|
Preference number: 3 (lower is better) Translates to: RSGVSITPGGPG*ASFDLRIPKHV Trigger: AACATGTTTGGGAATCCTAAGGTCAAAACTGGCCCAACCTGGACCTCCTGGAGTTATGCTCACCCCACTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTGTGCCAAGACCTTCAAGTGCCCGCTCCCAAAGACCTTATTTCCTTCTTTCTAGGACATGGTCATGCTaGTCCTATGTACAGAGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: GVPRPSSARSQRPYFLLSRTWSC*SYVQRS Trigger: ACTCCTCTGTACATAGGACAAGCATGACCATGTCCT...AGAAAGAAGGAAATAAGGTCTTTGGGAGCGGGCACTTGAAGGTCTTGGCACACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGACACCCCTTCAGGTTGTCTGCTCCATTCCCTTAATGTGGAGGTTCACGCCGTTCTGATTGTGAACTaGGGGTGCATTGCATACAAT | + |
|
Preference number: 3 (lower is better) Translates to: SDTPSGCLLHSLNVEVHAVLIVN*GCIAYN Trigger: ATTGTATGCAATGCACCCCAAGTTCACAATCAGAAC...GGCGTGAACCTCCACATTAAGGGAATGGAGCAGACAACCTGAAGGGGTGTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR TCA 72 bp | GGACATGGTCATGCTTGTCCTATGTACAGAGGAGTTTaGGGTCAGCCTAGACTAGATAGAATGAGACCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GHGHACPMYRGV*GQPRLDRMRPC Trigger: GCAGGGTCTCATTCTATCTAGTCTAGGCTGACCTCAAACTCCTCTGTACATAGGACAAGCATGACCATGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR GCA 72 bp | CAGGCCTGTAATCCTGAAAGCATAAGGACATGGTCATaGTTGTCCTATGTACAGAGGAGTTTGAGGTCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: QACNPESIRTWS*LSYVQRSLRSA Trigger: GGCTGACCTCAAACTCCTCTGTACATAGGACAAGCATGACCATGTCCTTATGCTTTCAGGATTACAGGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR CCA 72 bp | ATCCTGGTTTTAAAGTTGGTGACTAAAACAAAGAAGTaGGGTGAGCATAACTCCAGGAGGTCCAGGTTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: ILVLKLVTKTKK*GEHNSRRSRLG Trigger: GCCCAACCTGGACCTCCTGGAGTTATGCTCACCCCACTTCTTTGTTTTAGTCACCAACTTTAAAACCAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR TCA 72 bp | CAGTTAATCACAGAAGTTAATAGAGGGACCCAAGACTaGCTACCTAGACCTCTTTGCAGGAAGAGAGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: QLITEVNRGTQD*LPRPLCRKRGS Trigger: TGAGCCTCTCTTCCTGCAAAGAGGTCTAGGTAGTCAGTCTTGGGTCCCTCTATTAACTTCTGTGATTAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR CCA 72 bp | CTCAGACAGTGTCTGTATTCTCTCCCGGTATGCATGTaGCTGTTTCTAGATCATTCCTTATTATTCGTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LRQCLYSLPVCM*LFLDHSLLFVA Trigger: GGCCACGAATAATAAGGAATGATCTAGAAACAGCCACATGCATACCGGGAGAGAATACAGACACTGTCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR TCA 72 bp | GGAGGGTACATGGCAAAGCATAGTAGTATAGCAGGCTaGTATATACAGCACTGGGAAACTGGTTTCCATTGT | + |
|
Preference number: 3 (lower is better) Translates to: GGYMAKHSSIAG*YIQHWETGFHC Trigger: ACAATGGAAACCAGTTTCCCAGTGCTGTATATATCAGCCTGCTATACTACTATGCTTTGCCATGTACCCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR GCA 72 bp | GAGGATCTCAGACAGTGTCTGTATTCTCTCCCGGTATaGATGTGGCTGTTTCTAGATCATTCCTTATTATTC | + |
|
Preference number: 3 (lower is better) Translates to: EDLRQCLYSLPV*MWLFLDHSLLF Trigger: GAATAATAAGGAATGATCTAGAAACAGCCACATGCATACCGGGAGAGAATACAGACACTGTCTGAGATCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR TCA 72 bp | TTTTTGTGCTATTTTATGCCCAGCTTAACATCCACATaGGACTCTTGTCAGTGGGTGACATTTACTCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: FLCYFMPSLTST*DSCQWVTFTPE Trigger: CTCAGGAGTAAATGTCACCCACTGACAAGAGTCTCATGTGGATGTTAAGCTGGGCATAAAATAGCACAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR GCA 72 bp | AGCATCTCAGAGAAATGGCGCATACCCTTCAGTAACTaGTCATTTTATAGTGTTAGTTTTATAGCCCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SISEKWRIPFSN*SFYSVSFIAQA Trigger: AGCCTGGGCTATAAAACTAACACTATAAAATGAGCAGTTACTGAAGGGTATGCGCCATTTCTCTGAGATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR-3UTR CAA 90 bp | AAACAGTGCAGATACTTGGTTTTTGTGCTATTTTATGCCCAGCTTAACATCCACGAAATTCTTAGAAAGTaGGTAGGGGTGCAAAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: KQCRYLVFVLFYAQLNIHEILRK*VGVQRS Trigger: GCTCCTTTGCACCCCTACCAACTTTCTAAGAATTTC...GTGGATGTTAAGCTGGGCATAAAATAGCACAAAAACCAAGTATCTGCACTGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR-3UTR CAA 90 bp | TTAAACAGTGCAGATACTTGGTTTTTGTGCTATTTTATGCCCAGCTTAACATCCATTTGCCTTACAAATTaGAGGACCAGAGTTCGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: LNSADTWFLCYFMPSLTSICLTN*RTRVRV Trigger: GACCCGAACTCTGGTCCTCAAATTTGTAAGGCAAAT...GGATGTTAAGCTGGGCATAAAATAGCACAAAAACCAAGTATCTGCACTGTTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR TCA 72 bp | ATATACAGCACTGGGAAACTGGTTTCCATTGTAGGATaGTGTATACCGAGTACCATGAGGGATGATATATAC | + |
|
Preference number: 3 (lower is better) Translates to: IYSTGKLVSIVG*CIPSTMRDDIY Trigger: GTATATATCATCCCTCATGGTACTCGGTATACATCATCCTACAATGGAAACCAGTTTCCCAGTGCTGTATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR CCA 72 bp | TTAAAAATTCTACAATTTCATATAAACGGCTGGGTTTaGGGCCTAAGGAAGAAAAATGTTGCAAATATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LKILQFHINGWV*GLRKKNVANIW Trigger: CCAGATATTTGCAACATTTTTCTTCCTTAGGCCCCAAACCCAGCCGTTTATATGAAATTGTAGAATTTTTAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| CDS-3UTR TCA 90 bp | CAGAAGCCATGTAGACCTGCTCTAGTGCAGGCTGAGCCCTCTTTGAGGCCAGGCAGTAGGTACCTTCCTTaGAGGGACAGTGGCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QKPCRPALVQAEPSLRPGSRYLP*RDSGRA Trigger: TGCCCTGCCACTGTCCCTTCAAGGAAGGTACCTACT...GCCTGGCCTCAAAGAGGGCTCAGCCTGCACTAGAGCAGGTCTACATGGCTTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR CAA 72 bp | CAGGCTGAGCCCTCTTTGAGGCCAGGCACCAAGGACTaGACCTTGAAGGGGGAAGAGATGCGGCCAGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: QAEPSLRPGTKD*TLKGEEMRPDN Trigger: GTTATCTGGCCGCATCTCTTCCCCCTTCAAGGTCAAGTCCTTGGTGCCTGGCCTCAAAGAGGGCTCAGCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR CAA 72 bp | CCATGTAGACCTGCTCTAGTGCAGGCTGAGCCCTCTTaGAGGCCAGGCACCAAGGACTTGACCTTGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PCRPALVQAEPS*RPGTKDLTLKG Trigger: CCCCTTCAAGGTCAAGTCCTTGGTGCCTGGCCTCAAAGAGGGCTCAGCCTGCACTAGAGCAGGTCTACATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR CAA 72 bp | GTCCAGAACCTGGGCTGTCCGAGGAGGCTCAGGAAGTaGTCATGGTGCAACCTGATGTGGGACCCACTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VQNLGCPRRLRK*SWCNLMWDPLS Trigger: AGAGAGTGGGTCCCACATCAGGTTGCACCATGACAACTTCCTGAGCCTCCTCGGACAGCCCAGGTTCTGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| CDS-3UTR TCA 90 bp | CACCACCCTGCCTCTTCAGGATCTGTCAGCCCCAGTGTTGACAAGTTAAGTTGCCCTTCTGAGGAGCAGTaGGGGGAACGCTGGTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HHPASSGSVSPSVDKLSCPSEEQ*GERWSC Trigger: GCAAGACCAGCGTTCCCCTCACTGCTCCTCAGAAGG...GCAACTTAACTTGTCAACACTGGGGCTGACAGATCCTGAAGAGGCAGGGTGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| CDS-3UTR TCA 90 bp | GGACCCACTCTCTTCACAGGACCCCTGTTCCACGTGGTGGCTGCTAGGTGGGATCTACACAAGGAATCTTaGCCCAGAAGCCAGCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: GPTLFTGPLFHVVAARWDLHKES*PRSQPL Trigger: AAGTGGCTGGCTTCTGGGTCAAGATTCCTTGTGTAG...ATCCCACCTAGCAGCCACCACGTGGAACAGGGGTCCTGTGAAGAGAGTGGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| CDS-3UTR GCA 90 bp | GTGATGGCTCGGAAGTTGGCACAGTGCCCAGCTCTCAGAAGCCATGTAGACCTGGGCGCTTCCCACCACTaGTCAAGATACTCTGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: VMARKLAQCPALRSHVDLGASHH*SRYSGC Trigger: GCATCCAGAGTATCTTGAGCAGTGGTGGGAAGCGCC...CAGGTCTACATGGCTTCTGAGAGCTGGGCACTGTGCCAACTTCCGAGCCATCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR CAA 72 bp | GTGAACCCCTCTACTCTGGTGGTGATGGCTCGGAAGTaGGCACAGTGCCCAGCTCTCAGAAGCCATGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VNPSTLVVMARK*AQCPALRSHVD Trigger: GTCTACATGGCTTCTGAGAGCTGGGCACTGTGCCAACTTCCGAGCCATCACCACCAGAGTAGAGGGGTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| 3UTR CAA 72 bp | GAGCCCTCTTTGAGGCCAGGCACCAAGGACTTGACCTaGAAGGGGGAAGAGATGCGGCCAGATAACTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EPSLRPGTKDLT*KGEEMRPDNLR Trigger: TCTCAAGTTATCTGGCCGCATCTCTTCCCCCTTCAAGGTCAAGTCCTTGGTGCCTGGCCTCAAAGAGGGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| CDS-3UTR GCA 90 bp | GTGATGGCTCGGAAGTTGGCACAGTGCCCAGCTCTCAGAAGCCATGTAGACCTGGAGGCTTTTGATCACTaGAGGGTCCTTTCCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: VMARKLAQCPALRSHVDLEAFDH*RVLSFI Trigger: GATGAAGGAAAGGACCCTGCAGTGATCAAAAGCCTC...CAGGTCTACATGGCTTCTGAGAGCTGGGCACTGTGCCAACTTCCGAGCCATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| CDS-3UTR CCA 90 bp | GTGATGGCTCGGAAGTTGGCACAGTGCCCAGCTCTCAGAAGCCATGTAGACCTGACAATGGGGTCAGGTTaGATCGTGAGGCTTTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: VMARKLAQCPALRSHVDLTMGSG*IVRLLI Trigger: GATCAAAAGCCTCACGATCCAACCTGACCCCATTGT...CAGGTCTACATGGCTTCTGAGAGCTGGGCACTGTGCCAACTTCCGAGCCATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
||
| CDS-3UTR CCA 90 bp | TCAAATGTCACATCACCTGTCATTAATGCTAAGACCCTCCACAGCCACACCCACGAGAAGCCACCAAGTTaGGAAAGGCGCTTCGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: SNVTSPVINAKTLHSHTHEKPPS*ERRFGT Trigger: CGTCCCGAAGCGCCTTTCCCAACTTGGTGGCTTCTC...GTGGGTGTGGCTGTGGAGGGTCTTAGCATTAATGACAGGTGATGTGACATTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR CAA 72 bp | CTAGATAGAATGAGACCCTGCCTCTCAGTAGCAGATTaGCCTTACAAATTTGAGGACCAGAGTTCGGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: LDRMRPCLSVAD*PYKFEDQSSGP Trigger: GGGACCCGAACTCTGGTCCTCAAATTTGTAAGGCAAATCTGCTACTGAGAGGCAGGGTCTCATTCTATCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| 3UTR CAA 72 bp | CTAGATCATTCCTTATTATTCGTGGCCTTGGCAACCTaGAAGAGCTGCTTGGGATTATCTGACCATAGTTAT | + |
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Preference number: 4 (lower is better) Translates to: LDHSLLFVALAT*KSCLGLSDHSY Trigger: ATAACTATGGTCAGATAATCCCAAGCAGCTCTTCAAGGTTGCCAAGGCCACGAATAATAAGGAATGATCTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| CDS-3UTR CAA 90 bp | ACGTGGTGGCTGCTAGGTGGGATCTACTCCAGTGTGAACCCCTCTACTCTGGTGGGAGAAGCCACCAAGTaGGGAAAGGCGCTTCGGGAC | + |
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Preference number: 5 (lower is better) Translates to: TWWLLGGIYSSVNPSTLVGEATK*GKALRD Trigger: GTCCCGAAGCGCCTTTCCCAACTTGGTGGCTTCTCC...CACCAGAGTAGAGGGGTTCACACTGGAGTAGATCCCACCTAGCAGCCACCACGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| CDS-3UTR CAA 90 bp | CCTGGGAGCCAGATTATGTCCCTGGGTGAGTCCGTGGGGCCCCTTTGGCCTGCATCTACACAAGGAATCTaGACCCAGAAGCCAGCCACT | + |
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Preference number: 5 (lower is better) Translates to: PGSQIMSLGESVGPLWPASTQGI*TQKPAT Trigger: AGTGGCTGGCTTCTGGGTCAAGATTCCTTGTGTAGA...TGCAGGCCAAAGGGGCCCCACGGACTCACCCAGGGACATAATCTGGCTCCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| CDS-3UTR CAA 90 bp | AGTCCAGAACCTGGGCTGTCCGAGGAGGCTCAGGAAGTTGTCATGGTGCAACCTAGAGAGGCAGCAATCTaGATGCAGCCCAGGCGCTTC | + |
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Preference number: 5 (lower is better) Translates to: SPEPGLSEEAQEVVMVQPREAAI*MQPRRF Trigger: GAAGCGCCTGGGCTGCATCAAGATTGCTGCCTCTCT...AGGTTGCACCATGACAACTTCCTGAGCCTCCTCGGACAGCCCAGGTTCTGGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| CDS-3UTR CAA 90 bp | TCAGACACCCCTTCAGGTTGTCTGCTCCATTCCCTTAATGTGGAGGTTCACGCCAGGGGAACGCTGGTCTaGCCCTCAAGGCTGACGACT | + |
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Preference number: 5 (lower is better) Translates to: SDTPSGCLLHSLNVEVHARGTLV*PSRLTT Trigger: AGTCGTCAGCCTTGAGGGCAAGACCAGCGTTCCCCT...GGCGTGAACCTCCACATTAAGGGAATGGAGCAGACAACCTGAAGGGGTGTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| CDS-3UTR CAA 90 bp | AAGAAAAATGTTGCAAATATCTGGCAACATTCCTTACATGGAACTTGCAGGGGATGGATCGTGAGGCTTTaGATCACTGCAGGGTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: KKNVANIWQHSLHGTCRGWIVRL*ITAGSF Trigger: AAAGGACCCTGCAGTGATCAAAAGCCTCACGATCCA...TCCCCTGCAAGTTCCATGTAAGGAATGTTGCCAGATATTTGCAACATTTTTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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| CDS-3UTR CAA 90 bp | AAGAAAAATGTTGCAAATATCTGGCAACATTCCTTACATGGAACTTGCAGGGGACACAATGGGGTCAGGTaGGATCGTGAGGCTTTTGAT | + |
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Preference number: 5 (lower is better) Translates to: KKNVANIWQHSLHGTCRGHNGVR*DREAFD Trigger: ATCAAAAGCCTCACGATCCAACCTGACCCCATTGTG...TCCCCTGCAAGTTCCATGTAAGGAATGTTGCCAGATATTTGCAACATTTTTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000000608.8 |
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