Pregenerated sensors for GLYR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022536Ensembl transcript IDs: ENSMUST00000023189.15, ENSMUST00000115844.3
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGAGCTTCTTCACAGCCACCAGGAGAGATAGATCCTCTTATCCCTaGCCAGGGCCTCAGGGAGACAGGGTGCTGCTGTGTACTGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: KSFFTATRRDRSSYP*PGPQGDRVLLCTVL Trigger: CAGCACAGTACACAGCAGCACCCTGTCTCCCTGAGGCCCTGGCCAGGGATAAGAGGATCTATCTCTCCTGGTGGCTGTGAAGAAGCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR GCA 90 bp | AAGACTGTAGACTCTGCTCCCCCTGAAGAGGGGTCTATGTGGCTATaGTGGTCTCTCTTCAGTTCACAGAGACACTCTGGGAGCTGCGGT | + |
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Preference number: 1 (lower is better) Translates to: KTVDSAPPEEGSMWL*WSLFSSQRHSGSCG Trigger: ACCGCAGCTCCCAGAGTGTCTCTGTGAACTGAAGAGAGACCAGCATAGCCACATAGACCCCTCTTCAGGGGGAGCAGAGTCTACAGTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR CCA 90 bp | GGACAGAAGACTGTAGACTCTGCTCCCCCTGAAGAGGGGTCTATGTaGCTATGCTGGTCTCTCTTCAGTTCACAGAGACACTCTGGGAGC | + |
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Preference number: 1 (lower is better) Translates to: GQKTVDSAPPEEGSM*LCWSLFSSQRHSGS Trigger: GCTCCCAGAGTGTCTCTGTGAACTGAAGAGAGACCAGCATAGCCACATAGACCCCTCTTCAGGGGGAGCAGAGTCTACAGTCTTCTGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR TCA 90 bp | GACCAAGACAGGCTGTGTCCAGACAGAAACTGTTCAGCATCCCAGTaGATGGACAATTGCACTGAACTCCACAAGCATCCCCTGCCCCGT | + |
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Preference number: 1 (lower is better) Translates to: DQDRLCPDRNCSASQ*MDNCTELHKHPLPR Trigger: ACGGGGCAGGGGATGCTTGTGGAGTTCAGTGCAATTGTCCATTCACTGGGATGCTGAACAGTTTCTGTCTGGACACAGCCTGTCTTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR GCA 90 bp | TGGCTATGCTGGTCTCTCTTCAGTTCACAGAGACACTCTGGGAGCTaGGGTGTAATGGTAGTGTCTACAGGAAAATCCTCCTCAGCTGGT | + |
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Preference number: 1 (lower is better) Translates to: WLCWSLFSSQRHSGS*GVMVVSTGKSSSAG Trigger: ACCAGCTGAGGAGGATTTTCCTGTAGACACTACCATTACACCGCAGCTCCCAGAGTGTCTCTGTGAACTGAAGAGAGACCAGCATAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR CCA 90 bp | GTCTATGTGGCTATGCTGGTCTCTCTTCAGTTCACAGAGACACTCTaGGAGCTGCGGTGTAATGGTAGTGTCTACAGGAAAATCCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: VYVAMLVSLQFTETL*ELRCNGSVYRKILL Trigger: GAGGAGGATTTTCCTGTAGACACTACCATTACACCGCAGCTCCCAGAGTGTCTCTGTGAACTGAAGAGAGACCAGCATAGCCACATAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR TCA 90 bp | CCCAGCCTAGGAAATGCTCATCTAGGAAATGCTTATTATTGGTGTTaGTCAGGCTGGGGCTGGGTCAAAAGAGGATGGGACAGAAATATC | + |
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Preference number: 1 (lower is better) Translates to: PSLGNAHLGNAYYWC*SGWGWVKRGWDRNI Trigger: GATATTTCTGTCCCATCCTCTTTTGACCCAGCCCCAGCCTGATCAACACCAATAATAAGCATTTCCTAGATGAGCATTTCCTAGGCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR TCA 90 bp | TGTCCTGAGATCCTTATCCCAGATGGAAAAGTTAAATCGTGGCTTTaGAAATCCAAACTCATGAGGAGGAAGGCTTCCTCGGGTGATTCC | + |
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Preference number: 1 (lower is better) Translates to: CPEILIPDGKVKSWL*KSKLMRRKASSGDS Trigger: GGAATCACCCGAGGAAGCCTTCCTCCTCATGAGTTTGGATTTTCAAAGCCACGATTTAACTTTTCCATCTGGGATAAGGATCTCAGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR-3UTR TCA 90 bp | AGGGACATGCAGGGGACCTGTGTAGAGCAGGCTGAACAGGTAGCCCAGCTCAAGATCCTCCTCAGCTGGTaGTCCACAGAGCCTCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: RDMQGTCVEQAEQVAQLKILLSW*STEPPQ Trigger: CTGAGGAGGCTCTGTGGATCACCAGCTGAGGAGGAT...CTTGAGCTGGGCTACCTGTTCAGCCTGCTCTACACAGGTCCCCTGCATGTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR-3UTR TCA 90 bp | ATGCAGGGGACCTGTGTAGAGCAGGCTGAACAGGTAGCCCAGCTCAAGAGCCTGTTGGTTCATGATGGCTaGGGGGCCTCTCCTTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: MQGTCVEQAEQVAQLKSLLVHDG*GASPFR Trigger: CCTGAAAGGAGAGGCCCCTCAGCCATCATGAACCAA...CAGGCTCTTGAGCTGGGCTACCTGTTCAGCCTGCTCTACACAGGTCCCCTGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR-3UTR CCA 90 bp | AGAGGGGTCTATGTGGCTATGCTGGTCTCTCTTCAGTTCACAGAGACACTCTGGACCCTGACCCCACACTaGGAGGGGAGGTCAGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: RGVYVAMLVSLQFTETLWTLTPH*EGRSEG Trigger: TCCCTCTGACCTCCCCTCCCAGTGTGGGGTCAGGGT...CCAGAGTGTCTCTGTGAACTGAAGAGAGACCAGCATAGCCACATAGACCCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR-3UTR CCA 90 bp | ATGCAGGGGACCTGTGTAGAGCAGGCTGAACAGGTAGCCCAGCTCAAGAGCCTGGAAGAGGGGTCTATGTaGCTATGCTGGTCTCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: MQGTCVEQAEQVAQLKSLEEGSM*LCWSLF Trigger: GAAGAGAGACCAGCATAGCCACATAGACCCCTCTTC...CAGGCTCTTGAGCTGGGCTACCTGTTCAGCCTGCTCTACACAGGTCCCCTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR-3UTR TCA 90 bp | GAGGGGTCTATGTGGCTATGCTGGTCTCTCTTCAGTTCACAGAGACACTCTGGGCTGTCCTGGGGAAGTTaGAAGCTTCCAGTGCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: EGSMWLCWSLFSSQRHSGLSWGS*KLPVLP Trigger: AGGGAGCACTGGAAGCTTTCAACTTCCCCAGGACAG...CCCAGAGTGTCTCTGTGAACTGAAGAGAGACCAGCATAGCCACATAGACCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR-3UTR TCA 90 bp | AGAGGGGTCTATGTGGCTATGCTGGTCTCTCTTCAGTTCACAGAGACACTCTGGATCCTCCTCAGCTGGTaGTCCACAGAGCCTCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: RGVYVAMLVSLQFTETLWILLSW*STEPPQ Trigger: CTGAGGAGGCTCTGTGGATCACCAGCTGAGGAGGAT...CCAGAGTGTCTCTGTGAACTGAAGAGAGACCAGCATAGCCACATAGACCCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR-3UTR TCA 90 bp | TGGGCTGGAATGCAAATCCAAATGAAACCTCCTGGGAGGAACAGGCTCAGGACAAGACTCTGCTCCCCCTaGAGAGGGGTCTATGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: WAGMQIQMKPPGRNRLRTRLCSP*RGVYVA Trigger: AGCCACATAGACCCCTCTTCAGGGGGAGCAGAGTCT...TGTCCTGAGCCTGTTCCTCCCAGGAGGTTTCATTTGGATTTGCATTCCAGCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR-3UTR TCA 90 bp | AATTGCACTGAACTCCACAAGCATCCCCTGCCCCGTGCCCATGTCCTGAGATCCGAAAATCCAAACTCATaGGGAGGAAGGCTTCCTCGG | + |
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Preference number: 2 (lower is better) Translates to: NCTELHKHPLPRAHVLRSENPNS*GGRLPR Trigger: CCGAGGAAGCCTTCCTCCTCATGAGTTTGGATTTTC...GGATCTCAGGACATGGGCACGGGGCAGGGGATGCTTGTGGAGTTCAGTGCAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR-3UTR TCA 90 bp | TGGGCTGGAATGCAAATCCAAATGAAACCTCCTGGGAGGAACAGGCTCAGGACACTGTCCTGGGGAAGTTaGAAGCTTCCAGTGCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: WAGMQIQMKPPGRNRLRTLSWGS*KLPVLP Trigger: AGGGAGCACTGGAAGCTTTCAACTTCCCCAGGACAG...TGTCCTGAGCCTGTTCCTCCCAGGAGGTTTCATTTGGATTTGCATTCCAGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR-3UTR CCA 90 bp | CAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAAGCATTTCCACAGTGTCACATTACCCTGACCCCACACTaGGAGGGGAGGTCAGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: QGKAGVGAFLQAFPQCHITLTPH*EGRSEG Trigger: TCCCTCTGACCTCCCCTCCCAGTGTGGGGTCAGGGT...AATGTGACACTGTGGAAATGCTTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR-3UTR CCA 90 bp | TCAGGACAGAAGACTGTAGACTCTGCTCCCCCTGAAGAGGGGTCTATGTGGCTAATGGAGACAGGTGACTaGTCCAGAGCTAGTCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: SGQKTVDSAPPEEGSMWLMETGD*SRASPR Trigger: TCTGGGACTAGCTCTGGACCAGTCACCTGTCTCCAT...TAGCCACATAGACCCCTCTTCAGGGGGAGCAGAGTCTACAGTCTTCTGTCCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR-3UTR TCA 90 bp | CAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAAGCATTTCCACAGTGTCACATTAGACTCTGCTCCCCCTaGAGAGGGGTCTATGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: QGKAGVGAFLQAFPQCHIRLCSP*RGVYVA Trigger: AGCCACATAGACCCCTCTTCAGGGGGAGCAGAGTCT...AATGTGACACTGTGGAAATGCTTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR-3UTR TCA 90 bp | CAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAAGCATTTCCACAGTGTCACATTCCCGTGCCCATGTCCTaGGATCCTTATCCCAGATGG | + |
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Preference number: 2 (lower is better) Translates to: QGKAGVGAFLQAFPQCHIPVPMS*DPYPRW Trigger: CCATCTGGGATAAGGATCTCAGGACATGGGCACGGG...AATGTGACACTGTGGAAATGCTTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR-3UTR GCA 90 bp | TCATTTCAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAAGCATTTCCACAGTGTGCATCCCCTGCCCCGTaGCCATGTCCTGAGATCCTT | + |
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Preference number: 2 (lower is better) Translates to: SFQGKAGVGAFLQAFPQCASPAP*PCPEIL Trigger: AAGGATCTCAGGACATGGGCACGGGGCAGGGGATGC...ACACTGTGGAAATGCTTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTGAAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR-3UTR CCA 90 bp | CAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAAGCATTTCCACAGTGTCACATTAGATCCTCTTATCCCTaGCCAGGGCCTCAGGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: QGKAGVGAFLQAFPQCHIRSSYP*PGPQGD Trigger: GTCTCCCTGAGGCCCTGGCCAGGGATAAGAGGATCT...AATGTGACACTGTGGAAATGCTTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR-3UTR CCA 90 bp | AATTGCACTGAACTCCACAAGCATCCCCTGCCCCGTGCCCATGTCCTGAGATCCTGGGTCAAAAGAGGATaGGACAGAAATATCTCCATG | + |
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Preference number: 2 (lower is better) Translates to: NCTELHKHPLPRAHVLRSWVKRG*DRNISM Trigger: CATGGAGATATTTCTGTCCCATCCTCTTTTGACCCA...GGATCTCAGGACATGGGCACGGGGCAGGGGATGCTTGTGGAGTTCAGTGCAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR-3UTR TCA 90 bp | AATTGCACTGAACTCCACAAGCATCCCCTGCCCCGTGCCCATGTCCTGAGATCCGTTAAATCGTGGCTTTaGAAATCCAAACTCATGAGG | + |
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Preference number: 2 (lower is better) Translates to: NCTELHKHPLPRAHVLRSVKSWL*KSKLMR Trigger: CCTCATGAGTTTGGATTTTCAAAGCCACGATTTAAC...GGATCTCAGGACATGGGCACGGGGCAGGGGATGCTTGTGGAGTTCAGTGCAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR-3UTR GCA 90 bp | AATCACCTAGATCTGTCATTTCAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAAGCATCCCCTGCCCCGTaGCCATGTCCTGAGATCCTT | + |
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Preference number: 2 (lower is better) Translates to: NHLDLSFQGKAGVGAFLQASPAP*PCPEIL Trigger: AAGGATCTCAGGACATGGGCACGGGGCAGGGGATGC...TTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTGAAATGACAGATCTAGGTGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR-3UTR TCA 90 bp | TCATTTCAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAAGCATTTCCACAGTGTTTGGTTCATGATGGCTaGGGGGCCTCTCCTTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: SFQGKAGVGAFLQAFPQCLVHDG*GASPFR Trigger: CCTGAAAGGAGAGGCCCCTCAGCCATCATGAACCAA...ACACTGTGGAAATGCTTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTGAAATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR-3UTR GCA 90 bp | AATCACCTAGATCTGTCATTTCAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAAGCCCATACACTTCACTaGTCCCAAGGCCCTTACGGC | + |
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Preference number: 2 (lower is better) Translates to: NHLDLSFQGKAGVGAFLQAHTLH*SQGPYG Trigger: GCCGTAAGGGCCTTGGGAGCAGTGAAGTGTATGGGC...TTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTGAAATGACAGATCTAGGTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR-3UTR CCA 90 bp | AATCACCTAGATCTGTCATTTCAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAAAGGTCAGAGGGAAGATaGGAGGGTAGATGGGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: NHLDLSFQGKAGVGAFLQRSEGR*EGRWAG Trigger: GCCTGCCCATCTACCCTCCCATCTTCCCTCTGACCT...TTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTGAAATGACAGATCTAGGTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR CAA 90 bp | GCCCAGCCTAGGAAATGCTCATCTAGGAAATGCTTATTATTGGTGTaGATCAGGCTGGGGCTGGGTCAAAAGAGGATGGGACAGAAATAT | + |
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Preference number: 2 (lower is better) Translates to: AQPRKCSSRKCLLLV*IRLGLGQKRMGQKY Trigger: ATATTTCTGTCCCATCCTCTTTTGACCCAGCCCCAGCCTGATCAACACCAATAATAAGCATTTCCTAGATGAGCATTTCCTAGGCTGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR-3UTR TCA 90 bp | AATCACCTAGATCTGTCATTTCAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAAGAAAATCCAAACTCATaGGGAGGAAGGCTTCCTCGG | + |
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Preference number: 2 (lower is better) Translates to: NHLDLSFQGKAGVGAFLQENPNS*GGRLPR Trigger: CCGAGGAAGCCTTCCTCCTCATGAGTTTGGATTTTC...TTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTGAAATGACAGATCTAGGTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR-3UTR CCA 90 bp | AGATCCTTATCCCAGATGGAAAAGTTAAATCGTGGCTTTGAAAATCCAAACTCAAGGTCAGAGGGAAGATaGGAGGGTAGATGGGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: RSLSQMEKLNRGFENPNSRSEGR*EGRWAG Trigger: GCCTGCCCATCTACCCTCCCATCTTCCCTCTGACCT...TGAGTTTGGATTTTCAAAGCCACGATTTAACTTTTCCATCTGGGATAAGGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR-3UTR CCA 90 bp | AGATCCTTATCCCAGATGGAAAAGTTAAATCGTGGCTTTGAAAATCCAAACTCAAGATCCTCTTATCCCTaGCCAGGGCCTCAGGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: RSLSQMEKLNRGFENPNSRSSYP*PGPQGD Trigger: GTCTCCCTGAGGCCCTGGCCAGGGATAAGAGGATCT...TGAGTTTGGATTTTCAAAGCCACGATTTAACTTTTCCATCTGGGATAAGGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR-3UTR TCA 90 bp | AGATCCTTATCCCAGATGGAAAAGTTAAATCGTGGCTTTGAAAATCCAAACTCAGAATCTGTTGGTTCATaGTGGCTGAGGGGCCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: RSLSQMEKLNRGFENPNSESVGS*WLRGLS Trigger: GGAGAGGCCCCTCAGCCATCATGAACCAACAGATTC...TGAGTTTGGATTTTCAAAGCCACGATTTAACTTTTCCATCTGGGATAAGGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR-3UTR TCA 90 bp | TCATTTCAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAAGCATTTCCACAGTGTGAATGCAAATCCAAATaGAACCTCCTGGGAGGAACA | + |
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Preference number: 2 (lower is better) Translates to: SFQGKAGVGAFLQAFPQCECKSK*NLLGGT Trigger: TGTTCCTCCCAGGAGGTTTCATTTGGATTTGCATTC...ACACTGTGGAAATGCTTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTGAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR-3UTR CCA 90 bp | AGATCCTTATCCCAGATGGAAAAGTTAAATCGTGGCTTTGAAAATCCAAACTCATGGGTCAAAAGAGGATaGGACAGAAATATCTCCATG | + |
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Preference number: 2 (lower is better) Translates to: RSLSQMEKLNRGFENPNSWVKRG*DRNISM Trigger: CATGGAGATATTTCTGTCCCATCCTCTTTTGACCCA...TGAGTTTGGATTTTCAAAGCCACGATTTAACTTTTCCATCTGGGATAAGGATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR TCA 72 bp | AGACAGGTGACTGGTCCAGAGCTAGTCCCAGAACCCTaGCCCCACACTGGGAGGGGAGGTCAGAGGGAAGAT | + |
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Preference number: 3 (lower is better) Translates to: RQVTGPELVPEP*PHTGRGGQRED Trigger: ATCTTCCCTCTGACCTCCCCTCCCAGTGTGGGGTCAGGGTTCTGGGACTAGCTCTGGACCAGTCACCTGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR-3UTR CAA 90 bp | ATGCAGGGGACCTGTGTAGAGCAGGCTGAACAGGTAGCCCAGCTCAAGAGCCTGAGAAGGGGGCTAAGCTaGCAAGAACAGCCAGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: MQGTCVEQAEQVAQLKSLRRGLS*QEQPGS Trigger: GCTGCCTGGCTGTTCTTGCAAGCTTAGCCCCCTTCT...CAGGCTCTTGAGCTGGGCTACCTGTTCAGCCTGCTCTACACAGGTCCCCTGCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR TCA 72 bp | GATCCACAGAGCCTCCTCAGGGAATCTGTTGGTTCATaGTGGCTGAGGGGCCTCTCCTTTCAGGGGCCCAGT | + |
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Preference number: 3 (lower is better) Translates to: DPQSLLRESVGS*WLRGLSFQGPS Trigger: ACTGGGCCCCTGAAAGGAGAGGCCCCTCAGCCATCATGAACCAACAGATTCCCTGAGGAGGCTCTGTGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR CCA 72 bp | TTCACAGCCACCAGGAGAGATAGATCCTCTTATCCCTaGCCAGGGCCTCAGGGAGACAGGGTGCTGCTGTGT | + |
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Preference number: 3 (lower is better) Translates to: FTATRRDRSSYP*PGPQGDRVLLC Trigger: ACACAGCAGCACCCTGTCTCCCTGAGGCCCTGGCCAGGGATAAGAGGATCTATCTCTCCTGGTGGCTGTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR GCA 72 bp | GACTCTGCTCCCCCTGAAGAGGGGTCTATGTGGCTATaGTGGTCTCTCTTCAGTTCACAGAGACACTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: DSAPPEEGSMWL*WSLFSSQRHSG Trigger: CCCAGAGTGTCTCTGTGAACTGAAGAGAGACCAGCATAGCCACATAGACCCCTCTTCAGGGGGAGCAGAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR-3UTR CAA 90 bp | AGAGGGGTCTATGTGGCTATGCTGGTCTCTCTTCAGTTCACAGAGACACTCTGGTCTGTCCTGGGGAAGTaGAAAGCTTCCAGTGCTCCC | + |
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Preference number: 3 (lower is better) Translates to: RGVYVAMLVSLQFTETLWSVLGK*KASSAP Trigger: GGGAGCACTGGAAGCTTTCAACTTCCCCAGGACAGA...CCAGAGTGTCTCTGTGAACTGAAGAGAGACCAGCATAGCCACATAGACCCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR TCA 72 bp | AAACTGTTCAGCATCCCAGTGAATGGACAATTGCACTaGACTCCACAAGCATCCCCTGCCCCGTGCCCATGT | + |
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Preference number: 3 (lower is better) Translates to: KLFSIPVNGQLH*TPQASPAPCPC Trigger: ACATGGGCACGGGGCAGGGGATGCTTGTGGAGTTCAGTGCAATTGTCCATTCACTGGGATGCTGAACAGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR GCA 72 bp | GAGAACACAGAGGAACAGAGAGAATCCACAACCTCCTaGTCCAGGGTCAATCAAGGCCCAGCTCAAGAGCTT | + |
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Preference number: 3 (lower is better) Translates to: ENTEEQRESTTS*SRVNQGPAQEL Trigger: AAGCTCTTGAGCTGGGCCTTGATTGACCCTGGAGCAGGAGGTTGTGGATTCTCTCTGTTCCTCTGTGTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
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| 3UTR CCA 72 bp | ACTGTAGACTCTGCTCCCCCTGAAGAGGGGTCTATGTaGCTATGCTGGTCTCTCTTCAGTTCACAGAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: TVDSAPPEEGSM*LCWSLFSSQRH Trigger: GTGTCTCTGTGAACTGAAGAGAGACCAGCATAGCCACATAGACCCCTCTTCAGGGGGAGCAGAGTCTACAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| 3UTR TCA 72 bp | AGGCTGTGTCCAGACAGAAACTGTTCAGCATCCCAGTaGATGGACAATTGCACTGAACTCCACAAGCATCCC | + |
|
Preference number: 3 (lower is better) Translates to: RLCPDRNCSASQ*MDNCTELHKHP Trigger: GGGATGCTTGTGGAGTTCAGTGCAATTGTCCATTCACTGGGATGCTGAACAGTTTCTGTCTGGACACAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| 3UTR GCA 72 bp | TGGTCTCTCTTCAGTTCACAGAGACACTCTGGGAGCTaGGGTGTAATGGTAGTGTCTACAGGAAAATCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: WSLFSSQRHSGS*GVMVVSTGKSS Trigger: GGAGGATTTTCCTGTAGACACTACCATTACACCGCAGCTCCCAGAGTGTCTCTGTGAACTGAAGAGAGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| 3UTR CCA 72 bp | GCTATGCTGGTCTCTCTTCAGTTCACAGAGACACTCTaGGAGCTGCGGTGTAATGGTAGTGTCTACAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: AMLVSLQFTETL*ELRCNGSVYRK Trigger: TTTCCTGTAGACACTACCATTACACCGCAGCTCCCAGAGTGTCTCTGTGAACTGAAGAGAGACCAGCATAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| 3UTR CCA 72 bp | TGTGTCCAGACAGAAACTGTTCAGCATCCCAGTGAATaGACAATTGCACTGAACTCCACAAGCATCCCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: CVQTETVQHPSE*TIALNSTSIPC Trigger: GCAGGGGATGCTTGTGGAGTTCAGTGCAATTGTCCATTCACTGGGATGCTGAACAGTTTCTGTCTGGACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| 3UTR-3UTR CAA 90 bp | AATCACCTAGATCTGTCATTTCAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAAAGTCCCTCCAGTCTCTaGACCAGAAGGGGGCTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: NHLDLSFQGKAGVGAFLQSPSSL*TRRGLS Trigger: GCTTAGCCCCCTTCTGGTCAAGAGACTGGAGGGACT...TTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTGAAATGACAGATCTAGGTGATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| 3UTR TCA 72 bp | AAAATCCAAACTCATGAGGAGGAAGGCTTCCTCGGGTaGTTCCTCTCGTGTGACATTCTAAGCCTCTCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: KIQTHEEEGFLG*FLSCDILSLSG Trigger: ACCAGAGAGGCTTAGAATGTCACACGAGAGGAATCACCCGAGGAAGCCTTCCTCCTCATGAGTTTGGATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAAGCATTTCCACAGTGTCACATTTGCTTATTATTGGTGTaGATCAGGCTGGGGCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: QGKAGVGAFLQAFPQCHICLLLV*IRLGLG Trigger: ACCCAGCCCCAGCCTGATCAACACCAATAATAAGCA...AATGTGACACTGTGGAAATGCTTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| 3UTR-3UTR CAA 90 bp | TCATTTCAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAAGCATTTCCACAGTGTTGCTTATTATTGGTGTaGATCAGGCTGGGGCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SFQGKAGVGAFLQAFPQCCLLLV*IRLGLG Trigger: ACCCAGCCCCAGCCTGATCAACACCAATAATAAGCA...ACACTGTGGAAATGCTTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTGAAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| 3UTR TCA 72 bp | GGAAATGCTCATCTAGGAAATGCTTATTATTGGTGTTaGTCAGGCTGGGGCTGGGTCAAAAGAGGATGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: GNAHLGNAYYWC*SGWGWVKRGWD Trigger: GTCCCATCCTCTTTTGACCCAGCCCCAGCCTGATCAACACCAATAATAAGCATTTCCTAGATGAGCATTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| 3UTR TCA 72 bp | GAAAAGTTAAATCGTGGCTTTGAAAATCCAAACTCATaGGGAGGAAGGCTTCCTCGGGTGATTCCTCTCGTG | + |
|
Preference number: 3 (lower is better) Translates to: EKLNRGFENPNS*GGRLPRVIPLV Trigger: CACGAGAGGAATCACCCGAGGAAGCCTTCCTCCTCATGAGTTTGGATTTTCAAAGCCACGATTTAACTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| 3UTR-3UTR CAA 90 bp | TCATTTCAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAAGCATTTCCACAGTGTAGGAAATGCTTATTATaGGTGTTGATCAGGCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: SFQGKAGVGAFLQAFPQCRKCLL*VLIRLG Trigger: CCCCAGCCTGATCAACACCAATAATAAGCATTTCCT...ACACTGTGGAAATGCTTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTGAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR GCA 90 bp | AGGGACATGCAGGGGACCTGTGTAGAGCAGGCTGAACAGGTAGCCCAGCTCAAGCTCATTGGCTGCAGCTaGCATGGGAGTGGGGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RDMQGTCVEQAEQVAQLKLIGCS*HGSGVV Trigger: AACCACCCCACTCCCATGGCAGCTGCAGCCAATGAG...CTTGAGCTGGGCTACCTGTTCAGCCTGCTCTACACAGGTCCCCTGCATGTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR TCA 90 bp | GGGGTCTATGTGGCTATGCTGGTCTCTCTTCAGTTCACAGAGACACTCTGGGAGTCACTTGGGCCAGCGTaGGCCCCTCAGCAATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVYVAMLVSLQFTETLWESLGPA*APQQWW Trigger: CCACCATTGCTGAGGGGCTCACGCTGGCCCAAGTGA...CTCCCAGAGTGTCTCTGTGAACTGAAGAGAGACCAGCATAGCCACATAGACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR TCA 90 bp | ATGCAGGGGACCTGTGTAGAGCAGGCTGAACAGGTAGCCCAGCTCAAGAGCCTGCAAGAGTGTCTGCTGTaGTTGGCCTGTCACTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: MQGTCVEQAEQVAQLKSLQECLL*LACHLG Trigger: GCCCAAGTGACAGGCCAATCACAGCAGACACTCTTG...CAGGCTCTTGAGCTGGGCTACCTGTTCAGCCTGCTCTACACAGGTCCCCTGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR GCA 90 bp | ATGCAGGGGACCTGTGTAGAGCAGGCTGAACAGGTAGCCCAGCTCAAGAGCCTGCGCTTCCGGGGACTTTaGTCTTGGGCTCTTTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: MQGTCVEQAEQVAQLKSLRFRGL*SWALLR Trigger: CCTTAAAAGAGCCCAAGAGCAAAGTCCCCGGAAGCG...CAGGCTCTTGAGCTGGGCTACCTGTTCAGCCTGCTCTACACAGGTCCCCTGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR GCA 90 bp | CCCTCCAGTCTCTTGACCAGAAGGGGGCTAAGCTTGCAAGAACAGCCAGGCAGCCGCTTCCGGGGACTTTaGTCTTGGGCTCTTTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSSLLTRRGLSLQEQPGSRFRGL*SWALLR Trigger: CCTTAAAAGAGCCCAAGAGCAAAGTCCCCGGAAGCG...GCTGCCTGGCTGTTCTTGCAAGCTTAGCCCCCTTCTGGTCAAGAGACTGGAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CCA 90 bp | ATGCAGGGGACCTGTGTAGAGCAGGCTGAACAGGTAGCCCAGCTCAAGAGCCTGTGGCTCGGTCGCTGTTaGCTGCCATTTAAATGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MQGTCVEQAEQVAQLKSLWLGRC*LPFKCS Trigger: GCTGCATTTAAATGGCAGCCAACAGCGACCGAGCCA...CAGGCTCTTGAGCTGGGCTACCTGTTCAGCCTGCTCTACACAGGTCCCCTGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CCA 90 bp | AATTGCACTGAACTCCACAAGCATCCCCTGCCCCGTGCCCATGTCCTGAGATCCGAAAGCGTCCCCCTCTaGATACAATCACCTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NCTELHKHPLPRAHVLRSESVPL*IQSPGP Trigger: TGGCCCAGGTGATTGTATCCAGAGGGGGACGCTTTC...GGATCTCAGGACATGGGCACGGGGCAGGGGATGCTTGTGGAGTTCAGTGCAATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CCA 90 bp | GGGGTCTATGTGGCTATGCTGGTCTCTCTTCAGTTCACAGAGACACTCTGGGAGGATTGGCCTGTCACTTaGGCCAGCGTGAGCCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GVYVAMLVSLQFTETLWEDWPVT*ASVSPS Trigger: TGAGGGGCTCACGCTGGCCCAAGTGACAGGCCAATC...CTCCCAGAGTGTCTCTGTGAACTGAAGAGAGACCAGCATAGCCACATAGACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR TCA 90 bp | CCCTCCAGTCTCTTGACCAGAAGGGGGCTAAGCTTGCAAGAACAGCCAGGCAGCTCATTGGACAGTTGCTaGTTCCCTGAGACTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSSLLTRRGLSLQEQPGSSLDSC*FPETGA Trigger: AGCACCAGTCTCAGGGAATCAGCAACTGTCCAATGA...GCTGCCTGGCTGTTCTTGCAAGCTTAGCCCCCTTCTGGTCAAGAGACTGGAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR GCA 90 bp | AGAGGGGTCTATGTGGCTATGCTGGTCTCTCTTCAGTTCACAGAGACACTCTGGGGCCCCCTCTTTCTCTaGAGTCCGGTTCCAGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: RGVYVAMLVSLQFTETLWGPLFL*SPVPDS Trigger: ACTGTCTGGAACCGGACTGCAGAGAAAGAGGGGGCC...CCAGAGTGTCTCTGTGAACTGAAGAGAGACCAGCATAGCCACATAGACCCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023189.15 |
||
| CDS-3UTR GCA 90 bp | ATGCAGGGGACCTGTGTAGAGCAGGCTGAACAGGTAGCCCAGCTCAAGAGCCTGATGTCCAAGAGTGTCTaGTGTGATTGGCCTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: MQGTCVEQAEQVAQLKSLMSKSV*CDWPVT Trigger: AGTGACAGGCCAATCACAGCAGACACTCTTGGACAT...CAGGCTCTTGAGCTGGGCTACCTGTTCAGCCTGCTCTACACAGGTCCCCTGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CCA 90 bp | TGGGCTGGAATGCAAATCCAAATGAAACCTCCTGGGAGGAACAGGCTCAGGACACCAGCACCAGGTCCTTaGCTGCCTTTGGATCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: WAGMQIQMKPPGRNRLRTPAPGP*LPLDPT Trigger: TGTCGGATCCAAAGGCAGCCAAGGACCTGGTGCTGG...TGTCCTGAGCCTGTTCCTCCCAGGAGGTTTCATTTGGATTTGCATTCCAGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR TCA 90 bp | CCCTCCAGTCTCTTGACCAGAAGGGGGCTAAGCTTGCAAGAACAGCCAGGCAGCTTAGCTGTTCCACTTTaGTCCAGGCATGATCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSSLLTRRGLSLQEQPGSLAVPL*SRHDLL Trigger: CAGAAGATCATGCCTGGATCAAAGTGGAACAGCTAA...GCTGCCTGGCTGTTCTTGCAAGCTTAGCCCCCTTCTGGTCAAGAGACTGGAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR TCA 90 bp | GAGGGGTCTATGTGGCTATGCTGGTCTCTCTTCAGTTCACAGAGACACTCTGGGTCTGTCTGCAGAGCCTaGAGTCACCCTCTTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EGSMWLCWSLFSSQRHSGSVCRA*SHPLLS Trigger: GGAAAGAAGAGGGTGACTTCAGGCTCTGCAGACAGA...CCCAGAGTGTCTCTGTGAACTGAAGAGAGACCAGCATAGCCACATAGACCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR TCA 90 bp | TGGGCTGGAATGCAAATCCAAATGAAACCTCCTGGGAGGAACAGGCTCAGGACACAGCAATGGTGGCCATaGAGCTCCCTTGGACCATGT | + |
|
Preference number: 4 (lower is better) Translates to: WAGMQIQMKPPGRNRLRTQQWWP*SSLGPC Trigger: ACATGGTCCAAGGGAGCTTCATGGCCACCATTGCTG...TGTCCTGAGCCTGTTCCTCCCAGGAGGTTTCATTTGGATTTGCATTCCAGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR TCA 90 bp | AGAGGGGTCTATGTGGCTATGCTGGTCTCTCTTCAGTTCACAGAGACACTCTGGCAAGAGTGTCTGCTGTaGTTGGCCTGTCACTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RGVYVAMLVSLQFTETLWQECLL*LACHLG Trigger: GCCCAAGTGACAGGCCAATCACAGCAGACACTCTTG...CCAGAGTGTCTCTGTGAACTGAAGAGAGACCAGCATAGCCACATAGACCCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR GCA 90 bp | TGGGCTGGAATGCAAATCCAAATGAAACCTCCTGGGAGGAACAGGCTCAGGACATGCCATTCACAGCTGTaGTGTCTGCTGCCTGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: WAGMQIQMKPPGRNRLRTCHSQL*CLLPGW Trigger: CCATCCAGGCAGCAGACAGCACAGCTGTGAATGGCA...TGTCCTGAGCCTGTTCCTCCCAGGAGGTTTCATTTGGATTTGCATTCCAGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CCA 90 bp | AATTGCACTGAACTCCACAAGCATCCCCTGCCCCGTGCCCATGTCCTGAGATCCCTGGTAACAGACAGCTaGCTTCTCTGTTTGGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: NCTELHKHPLPRAHVLRSLVTDS*LLCLAQ Trigger: TTGAGCCAAACAGAGAAGCCAGCTGTCTGTTACCAG...GGATCTCAGGACATGGGCACGGGGCAGGGGATGCTTGTGGAGTTCAGTGCAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CCA 90 bp | AGAGGGGTCTATGTGGCTATGCTGGTCTCTCTTCAGTTCACAGAGACACTCTGGGAAAGCGTCCCCCTCTaGATACAATCACCTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGVYVAMLVSLQFTETLWESVPL*IQSPGP Trigger: TGGCCCAGGTGATTGTATCCAGAGGGGGACGCTTTC...CCAGAGTGTCTCTGTGAACTGAAGAGAGACCAGCATAGCCACATAGACCCCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CCA 90 bp | TGGGCTGGAATGCAAATCCAAATGAAACCTCCTGGGAGGAACAGGCTCAGGACAGCCATGGGAGTGGGGTaGTTGACTGCATCACCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: WAGMQIQMKPPGRNRLRTAMGVG*LTASPN Trigger: ATTGGGTGATGCAGTCAACCACCCCACTCCCATGGC...TGTCCTGAGCCTGTTCCTCCCAGGAGGTTTCATTTGGATTTGCATTCCAGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR TCA 90 bp | GAGGGGTCTATGTGGCTATGCTGGTCTCTCTTCAGTTCACAGAGACACTCTGGGTCCCTTTGGCTCTCCTaGGGAACTCTTCAACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EGSMWLCWSLFSSQRHSGSLWLS*GTLQQH Trigger: ATGCTGTTGAAGAGTTCCTCAGGAGAGCCAAAGGGA...CCCAGAGTGTCTCTGTGAACTGAAGAGAGACCAGCATAGCCACATAGACCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR TCA 90 bp | TGGGCTGGAATGCAAATCCAAATGAAACCTCCTGGGAGGAACAGGCTCAGGACATCTGTCTGCAGAGCCTaGAGTCACCCTCTTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: WAGMQIQMKPPGRNRLRTSVCRA*SHPLLS Trigger: GGAAAGAAGAGGGTGACTTCAGGCTCTGCAGACAGA...TGTCCTGAGCCTGTTCCTCCCAGGAGGTTTCATTTGGATTTGCATTCCAGCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR GCA 90 bp | GAGGGGTCTATGTGGCTATGCTGGTCTCTCTTCAGTTCACAGAGACACTCTGGGTCGGTCGCTGTTGGCTaGCATTTAAATGCAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: EGSMWLCWSLFSSQRHSGSVAVG*HLNAAI Trigger: GATGGCTGCATTTAAATGGCAGCCAACAGCGACCGA...CCCAGAGTGTCTCTGTGAACTGAAGAGAGACCAGCATAGCCACATAGACCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR GCA 90 bp | AGAGGGGTCTATGTGGCTATGCTGGTCTCTCTTCAGTTCACAGAGACACTCTGGAGTGGGGTGGTTGACTaGATCACCCAATGCAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: RGVYVAMLVSLQFTETLWSGVVD*ITQCNG Trigger: GCCATTGCATTGGGTGATGCAGTCAACCACCCCACT...CCAGAGTGTCTCTGTGAACTGAAGAGAGACCAGCATAGCCACATAGACCCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CCA 90 bp | TCAGGACAGAAGACTGTAGACTCTGCTCCCCCTGAAGAGGGGTCTATGTGGCTAGTGTGGGATGATGTCTaGTCTTTCCCTTTGGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SGQKTVDSAPPEEGSMWLVWDDV*SFPLAL Trigger: GAGAGCCAAAGGGAAAGACCAGACATCATCCCACAC...TAGCCACATAGACCCCTCTTCAGGGGGAGCAGAGTCTACAGTCTTCTGTCCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CCA 90 bp | CAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAAGCATTTCCACAGTGTCACATTGATTGGCCTGTCACTTaGGCCAGCGTGAGCCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QGKAGVGAFLQAFPQCHIDWPVT*ASVSPS Trigger: TGAGGGGCTCACGCTGGCCCAAGTGACAGGCCAATC...AATGTGACACTGTGGAAATGCTTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CCA 90 bp | TGGGCTGGAATGCAAATCCAAATGAAACCTCCTGGGAGGAACAGGCTCAGGACAATTAACAATCTTTCCTaGCCAGGGAGGATACCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: WAGMQIQMKPPGRNRLRTINNLS*PGRIPA Trigger: GGCCGGTATCCTCCCTGGCCAGGAAAGATTGTTAAT...TGTCCTGAGCCTGTTCCTCCCAGGAGGTTTCATTTGGATTTGCATTCCAGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CCA 90 bp | GGGGTCTATGTGGCTATGCTGGTCTCTCTTCAGTTCACAGAGACACTCTGGGAGCGGGGACTTTGCTCTTaGGCTCTTTTAAGGCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: GVYVAMLVSLQFTETLWERGLCS*ALLRHL Trigger: CAAATGCCTTAAAAGAGCCCAAGAGCAAAGTCCCCG...CTCCCAGAGTGTCTCTGTGAACTGAAGAGAGACCAGCATAGCCACATAGACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CCA 90 bp | GGGGTCTATGTGGCTATGCTGGTCTCTCTTCAGTTCACAGAGACACTCTGGGAGCTGGTAACAGACAGCTaGCTTCTCTGTTTGGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GVYVAMLVSLQFTETLWELVTDS*LLCLAQ Trigger: TTGAGCCAAACAGAGAAGCCAGCTGTCTGTTACCAG...CTCCCAGAGTGTCTCTGTGAACTGAAGAGAGACCAGCATAGCCACATAGACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CCA 90 bp | CAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAAGCATTTCCACAGTGTCACATTCCAGCACCAGGTCCTTaGCTGCCTTTGGATCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: QGKAGVGAFLQAFPQCHIPAPGP*LPLDPT Trigger: TGTCGGATCCAAAGGCAGCCAAGGACCTGGTGCTGG...AATGTGACACTGTGGAAATGCTTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CCA 90 bp | CTTATTATTGGTGTTGATCAGGCTGGGGCTGGGTCAAAAGAGGATGGGACAGAAGCCATGGGAGTGGGGTaGTTGACTGCATCACCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LIIGVDQAGAGSKEDGTEAMGVG*LTASPN Trigger: ATTGGGTGATGCAGTCAACCACCCCACTCCCATGGC...TTCTGTCCCATCCTCTTTTGACCCAGCCCCAGCCTGATCAACACCAATAATAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR TCA 90 bp | GGGGTCTATGTGGCTATGCTGGTCTCTCTTCAGTTCACAGAGACACTCTGGGAGTTAGCTGTTCCACTTTaGTCCAGGCATGATCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GVYVAMLVSLQFTETLWELAVPL*SRHDLL Trigger: CAGAAGATCATGCCTGGATCAAAGTGGAACAGCTAA...CTCCCAGAGTGTCTCTGTGAACTGAAGAGAGACCAGCATAGCCACATAGACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR TCA 90 bp | CAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAAGCATTTCCACAGTGTCACATTGAGGATCTGCATCTTTaGCTGGCTCGGTCGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QGKAGVGAFLQAFPQCHIEDLHL*LARSLL Trigger: CAACAGCGACCGAGCCAGTCAAAGATGCAGATCCTC...AATGTGACACTGTGGAAATGCTTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR GCA 90 bp | CAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAAGCATTTCCACAGTGTCACATTCACCAGGTCCTTGGCTaGCTTTGGATCCGACACACA | + |
|
Preference number: 4 (lower is better) Translates to: QGKAGVGAFLQAFPQCHIHQVLG*LWIRHT Trigger: TGTGTGTCGGATCCAAAGGCAGCCAAGGACCTGGTG...AATGTGACACTGTGGAAATGCTTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR GCA 90 bp | TCATTTCAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAAGCATTTCCACAGTGTCTCATTGGCTGCAGCTaGCATGGGAGTGGGGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SFQGKAGVGAFLQAFPQCLIGCS*HGSGVV Trigger: AACCACCCCACTCCCATGGCAGCTGCAGCCAATGAG...ACACTGTGGAAATGCTTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTGAAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR GCA 90 bp | CTTATTATTGGTGTTGATCAGGCTGGGGCTGGGTCAAAAGAGGATGGGACAGAATCGGTCGCTGTTGGCTaGCATTTAAATGCAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LIIGVDQAGAGSKEDGTESVAVG*HLNAAI Trigger: GATGGCTGCATTTAAATGGCAGCCAACAGCGACCGA...TTCTGTCCCATCCTCTTTTGACCCAGCCCCAGCCTGATCAACACCAATAATAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CCA 90 bp | CAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAAGCATTTCCACAGTGTCACATTTGGCTCGGTCGCTGTTaGCTGCCATTTAAATGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QGKAGVGAFLQAFPQCHIWLGRC*LPFKCS Trigger: GCTGCATTTAAATGGCAGCCAACAGCGACCGAGCCA...AATGTGACACTGTGGAAATGCTTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CCA 90 bp | GAGGGGTCTATGTGGCTATGCTGGTCTCTCTTCAGTTCACAGAGACACTCTGGGCCTTGTAGGATATTTTaGCACTTCTGGTCCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EGSMWLCWSLFSSQRHSGPCRIF*HFWSRK Trigger: CTTTCTGGACCAGAAGTGCCAAAATATCCTACAAGG...CCCAGAGTGTCTCTGTGAACTGAAGAGAGACCAGCATAGCCACATAGACCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR TCA 90 bp | CAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAAGCATTTCCACAGTGTCACATTTCCCTTTGGCTCTCCTaGGGAACTCTTCAACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QGKAGVGAFLQAFPQCHISLWLS*GTLQQH Trigger: ATGCTGTTGAAGAGTTCCTCAGGAGAGCCAAAGGGA...AATGTGACACTGTGGAAATGCTTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR TCA 90 bp | AATCACCTAGATCTGTCATTTCAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAAGAGGATCTGCATCTTTaGCTGGCTCGGTCGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NHLDLSFQGKAGVGAFLQEDLHL*LARSLL Trigger: CAACAGCGACCGAGCCAGTCAAAGATGCAGATCCTC...TTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTGAAATGACAGATCTAGGTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR TCA 90 bp | AGAGGGGTCTATGTGGCTATGCTGGTCTCTCTTCAGTTCACAGAGACACTCTGGACACACAGGCAAAAGTaGTGTCACAAGTTGAAACGA | + |
|
Preference number: 4 (lower is better) Translates to: RGVYVAMLVSLQFTETLWTHRQK*CHKLKR Trigger: TCGTTTCAACTTGTGACATCACTTTTGCCTGTGTGT...CCAGAGTGTCTCTGTGAACTGAAGAGAGACCAGCATAGCCACATAGACCCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR TCA 90 bp | AATCACCTAGATCTGTCATTTCAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAACAGCAATGGTGGCCATaGAGCTCCCTTGGACCATGT | + |
|
Preference number: 4 (lower is better) Translates to: NHLDLSFQGKAGVGAFLQQQWWP*SSLGPC Trigger: ACATGGTCCAAGGGAGCTTCATGGCCACCATTGCTG...TTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTGAAATGACAGATCTAGGTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR TCA 90 bp | AGATCCTTATCCCAGATGGAAAAGTTAAATCGTGGCTTTGAAAATCCAAACTCATCACTTGGGCCAGCGTaGGCCCCTCAGCAATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RSLSQMEKLNRGFENPNSSLGPA*APQQWW Trigger: CCACCATTGCTGAGGGGCTCACGCTGGCCCAAGTGA...TGAGTTTGGATTTTCAAAGCCACGATTTAACTTTTCCATCTGGGATAAGGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR GCA 90 bp | AATCACCTAGATCTGTCATTTCAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAACACCAGGTCCTTGGCTaGCTTTGGATCCGACACACA | + |
|
Preference number: 4 (lower is better) Translates to: NHLDLSFQGKAGVGAFLQHQVLG*LWIRHT Trigger: TGTGTGTCGGATCCAAAGGCAGCCAAGGACCTGGTG...TTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTGAAATGACAGATCTAGGTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CCA 90 bp | CAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAAGCATTTCCACAGTGTCACATTATTAACAATCTTTCCTaGCCAGGGAGGATACCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QGKAGVGAFLQAFPQCHIINNLS*PGRIPA Trigger: GGCCGGTATCCTCCCTGGCCAGGAAAGATTGTTAAT...AATGTGACACTGTGGAAATGCTTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR TCA 90 bp | CAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAAGCATTTCCACAGTGTCACATTAGCAGAAGTGTGGGATaGTGTCTGGTCTTTCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QGKAGVGAFLQAFPQCHISRSVG*CLVFPF Trigger: AAAGGGAAAGACCAGACATCATCCCACACTTCTGCT...AATGTGACACTGTGGAAATGCTTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR GCA 90 bp | CTTATTATTGGTGTTGATCAGGCTGGGGCTGGGTCAAAAGAGGATGGGACAGAACAAATCACATTTCTCTaGAGTCCGGTTCCAGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LIIGVDQAGAGSKEDGTEQITFL*SPVPDS Trigger: ACTGTCTGGAACCGGACTGCAGAGAAATGTGATTTG...TTCTGTCCCATCCTCTTTTGACCCAGCCCCAGCCTGATCAACACCAATAATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115844.3 |
||
| CDS-3UTR CCA 90 bp | TCATTTCAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAAGCATTTCCACAGTGTGTGTGGGATGATGTCTaGTCTTTCCCTTTGGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SFQGKAGVGAFLQAFPQCVWDDV*SFPLAL Trigger: GAGAGCCAAAGGGAAAGACCAGACATCATCCCACAC...ACACTGTGGAAATGCTTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTGAAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR GCA 90 bp | TCATTTCAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAAGCATTTCCACAGTGTATGTCCAAGAGTGTCTaGTGTGATTGGCCTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SFQGKAGVGAFLQAFPQCMSKSV*CDWPVT Trigger: AGTGACAGGCCAATCACAGCAGACACTCTTGGACAT...ACACTGTGGAAATGCTTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTGAAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CCA 90 bp | CTTATTATTGGTGTTGATCAGGCTGGGGCTGGGTCAAAAGAGGATGGGACAGAACCTTGTAGGATATTTTaGCACTTCTGGTCCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LIIGVDQAGAGSKEDGTEPCRIF*HFWSRK Trigger: CTTTCTGGACCAGAAGTGCCAAAATATCCTACAAGG...TTCTGTCCCATCCTCTTTTGACCCAGCCCCAGCCTGATCAACACCAATAATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR GCA 90 bp | AGATCCTTATCCCAGATGGAAAAGTTAAATCGTGGCTTTGAAAATCCAAACTCAAGTGGGGTGGTTGACTaGATCACCCAATGCAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSLSQMEKLNRGFENPNSSGVVD*ITQCNG Trigger: GCCATTGCATTGGGTGATGCAGTCAACCACCCCACT...TGAGTTTGGATTTTCAAAGCCACGATTTAACTTTTCCATCTGGGATAAGGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR TCA 90 bp | AGATCCTTATCCCAGATGGAAAAGTTAAATCGTGGCTTTGAAAATCCAAACTCAACACACAGGCAAAAGTaGTGTCACAAGTTGAAACGA | + |
|
Preference number: 4 (lower is better) Translates to: RSLSQMEKLNRGFENPNSTHRQK*CHKLKR Trigger: TCGTTTCAACTTGTGACATCACTTTTGCCTGTGTGT...TGAGTTTGGATTTTCAAAGCCACGATTTAACTTTTCCATCTGGGATAAGGATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CAA 90 bp | AGAGGGGTCTATGTGGCTATGCTGGTCTCTCTTCAGTTCACAGAGACACTCTGGCCCGGGGCGGATTCCTaGCAGCACACCGCTGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RGVYVAMLVSLQFTETLWPGADS*QHTAGA Trigger: GGCCCCAGCGGTGTGCTGCAAGGAATCCGCCCCGGG...CCAGAGTGTCTCTGTGAACTGAAGAGAGACCAGCATAGCCACATAGACCCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS TCA 90 bp | TACAATCACCTGGGCCAGCTCGGTGACTGTATCCGCATCCACCGTTaGCATGTCCACATAGCACTTCCCGGGGCGGATTCCTTGCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: YNHLGQLGDCIRIHR*HVHIALPGADSLQH Trigger: GTGCTGCAAGGAATCCGCCCCGGGAAGTGCTATGTGGACATGTCAACGGTGGATGCGGATACAGTCACCGAGCTGGCCCAGGTGATTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CAA 90 bp | AGGGACATGCAGGGGACCTGTGTAGAGCAGGCTGAACAGGTAGCCCAGCTCAAGACGGCAGACATATCATaGTCAGACTGGTCCAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RDMQGTCVEQAEQVAQLKTADIS*SDWSSA Trigger: GGCACTGGACCAGTCTGACAATGATATGTCTGCCGT...CTTGAGCTGGGCTACCTGTTCAGCCTGCTCTACACAGGTCCCCTGCATGTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CAA 90 bp | CCCTCCAGTCTCTTGACCAGAAGGGGGCTAAGCTTGCAAGAACAGCCAGGCAGCCCGGGGACTTTGCTCTaGGGCTCTTTTAAGGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: PSSLLTRRGLSLQEQPGSPGTLL*GSFKAF Trigger: AAATGCCTTAAAAGAGCCCAAGAGCAAAGTCCCCGG...GCTGCCTGGCTGTTCTTGCAAGCTTAGCCCCCTTCTGGTCAAGAGACTGGAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CAA 90 bp | TCAGGACAGAAGACTGTAGACTCTGCTCCCCCTGAAGAGGGGTCTATGTGGCTAGGTCCTTGGCTGCCTTaGGATCCGACACACAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SGQKTVDSAPPEEGSMWLGPWLP*DPTHRQ Trigger: TTGCCTGTGTGTCGGATCCAAAGGCAGCCAAGGACC...TAGCCACATAGACCCCTCTTCAGGGGGAGCAGAGTCTACAGTCTTCTGTCCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CAA 90 bp | AATTGCACTGAACTCCACAAGCATCCCCTGCCCCGTGCCCATGTCCTGAGATCCAACAGCATCCACAGCTaGCTGGAACCGTTTACCCTT | + |
|
Preference number: 5 (lower is better) Translates to: NCTELHKHPLPRAHVLRSNSIHS*LEPFTL Trigger: AAGGGTAAACGGTTCCAGCAAGCTGTGGATGCTGTT...GGATCTCAGGACATGGGCACGGGGCAGGGGATGCTTGTGGAGTTCAGTGCAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CAA 90 bp | TCAGGACAGAAGACTGTAGACTCTGCTCCCCCTGAAGAGGGGTCTATGTGGCTAACGGCAGACATATCATaGTCAGACTGGTCCAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SGQKTVDSAPPEEGSMWLTADIS*SDWSSA Trigger: GGCACTGGACCAGTCTGACAATGATATGTCTGCCGT...TAGCCACATAGACCCCTCTTCAGGGGGAGCAGAGTCTACAGTCTTCTGTCCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CAA 90 bp | GGGGTCTATGTGGCTATGCTGGTCTCTCTTCAGTTCACAGAGACACTCTGGGAGAACAGCATCCACAGCTaGCTGGAACCGTTTACCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GVYVAMLVSLQFTETLWENSIHS*LEPFTL Trigger: AAGGGTAAACGGTTCCAGCAAGCTGTGGATGCTGTT...CTCCCAGAGTGTCTCTGTGAACTGAAGAGAGACCAGCATAGCCACATAGACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CAA 90 bp | AGATCCTTATCCCAGATGGAAAAGTTAAATCGTGGCTTTGAAAATCCAAACTCACCCGGGGCGGATTCCTaGCAGCACACCGCTGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSLSQMEKLNRGFENPNSPGADS*QHTAGA Trigger: GGCCCCAGCGGTGTGCTGCAAGGAATCCGCCCCGGG...TGAGTTTGGATTTTCAAAGCCACGATTTAACTTTTCCATCTGGGATAAGGATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CAA 90 bp | AGGGACATGCAGGGGACCTGTGTAGAGCAGGCTGAACAGGTAGCCCAGCTCAAGTGGAACCGTTTACCCTaGTTAATCTTTATCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RDMQGTCVEQAEQVAQLKWNRLP*LIFIIS Trigger: GGAGATGATAAAGATTAACAAGGGTAAACGGTTCCA...CTTGAGCTGGGCTACCTGTTCAGCCTGCTCTACACAGGTCCCCTGCATGTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CAA 90 bp | CCCTCCAGTCTCTTGACCAGAAGGGGGCTAAGCTTGCAAGAACAGCCAGGCAGCTGGAACCGTTTACCCTaGTTAATCTTTATCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PSSLLTRRGLSLQEQPGSWNRLP*LIFIIS Trigger: GGAGATGATAAAGATTAACAAGGGTAAACGGTTCCA...GCTGCCTGGCTGTTCTTGCAAGCTTAGCCCCCTTCTGGTCAAGAGACTGGAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CAA 90 bp | AGGGACATGCAGGGGACCTGTGTAGAGCAGGCTGAACAGGTAGCCCAGCTCAAGAAAAATCCTATCTTTTaGTCTGTGGGTGTAATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RDMQGTCVEQAEQVAQLKKNPIF*SVGVML Trigger: CAGCATTACACCCACAGACAAAAAGATAGGATTTTT...CTTGAGCTGGGCTACCTGTTCAGCCTGCTCTACACAGGTCCCCTGCATGTCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CAA 90 bp | CCCTCCAGTCTCTTGACCAGAAGGGGGCTAAGCTTGCAAGAACAGCCAGGCAGCAAAAATCCTATCTTTTaGTCTGTGGGTGTAATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSSLLTRRGLSLQEQPGSKNPIF*SVGVML Trigger: CAGCATTACACCCACAGACAAAAAGATAGGATTTTT...GCTGCCTGGCTGTTCTTGCAAGCTTAGCCCCCTTCTGGTCAAGAGACTGGAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CAA 90 bp | TCATTTCAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAAGCATTTCCACAGTGTCCGGGGACTTTGCTCTaGGGCTCTTTTAAGGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: SFQGKAGVGAFLQAFPQCPGTLL*GSFKAF Trigger: AAATGCCTTAAAAGAGCCCAAGAGCAAAGTCCCCGG...ACACTGTGGAAATGCTTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTGAAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CAA 90 bp | CAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAAGCATTTCCACAGTGTCACATTAGTGCCTTGGCTCTTTaGTATACCTCATTGGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: QGKAGVGAFLQAFPQCHISALAL*YTSLAA Trigger: TGCAGCCAATGAGGTATACAAAAGAGCCAAGGCACT...AATGTGACACTGTGGAAATGCTTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CAA 90 bp | AGATCCTTATCCCAGATGGAAAAGTTAAATCGTGGCTTTGAAAATCCAAACTCAGGTCCTTGGCTGCCTTaGGATCCGACACACAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: RSLSQMEKLNRGFENPNSGPWLP*DPTHRQ Trigger: TTGCCTGTGTGTCGGATCCAAAGGCAGCCAAGGACC...TGAGTTTGGATTTTCAAAGCCACGATTTAACTTTTCCATCTGGGATAAGGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS-3UTR CAA 90 bp | AATCACCTAGATCTGTCATTTCAAGGAAAAGCGGGAGTAGGGGCTTTCTTACAAGAATTACGCCGATTCTaGTCATCAGCAGAAGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: NHLDLSFQGKAGVGAFLQELRRF*SSAEVW Trigger: CCACACTTCTGCTGATGACAAGAATCGGCGTAATTC...TTGTAAGAAAGCCCCTACTCCCGCTTTTCCTTGAAATGACAGATCTAGGTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS TCA 72 bp | CTGGGCCAGCTCGGTGACTGTATCCGCATCCACCGTTaGCATGTCCACATAGCACTTCCCGGGGCGGATTCC | + |
|
Preference number: 6 (lower is better) Translates to: LGQLGDCIRIHR*HVHIALPGADS Trigger: GGAATCCGCCCCGGGAAGTGCTATGTGGACATGTCAACGGTGGATGCGGATACAGTCACCGAGCTGGCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS CCA 72 bp | GCTTCCAGAAAGCGTCCCCCTCTGGATACAATCACCTaGGCCAGCTCGGTGACTGTATCCGCATCCACCGTT | + |
|
Preference number: 6 (lower is better) Translates to: ASRKRPPLDTIT*ASSVTVSASTV Trigger: AACGGTGGATGCGGATACAGTCACCGAGCTGGCCCAGGTGATTGTATCCAGAGGGGGACGCTTTCTGGAAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||
| CDS GCA 72 bp | TGCCTTGGCTCTTTTGTATACCTCATTGGCTGCAGCTaGCATGGGAGTGGGGTGGTTGACTGCATCACCCAA | + |
|
Preference number: 6 (lower is better) Translates to: CLGSFVYLIGCS*HGSGVVDCITQ Trigger: TTGGGTGATGCAGTCAACCACCCCACTCCCATGGCAGCTGCAGCCAATGAGGTATACAAAAGAGCCAAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023189.15 ENSMUST00000115844.3 |
||