Pregenerated sensors for GLYATL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091043Ensembl transcript IDs: ENSMUST00000166343.3
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GCCCTTTTCAATCCCACAGGCTTCTCTTGGTTTAATTCCCACCTCACTGGTAGCACTTCCTGGCCAGCGTaGGGGCCACCAGTCGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: ALFNPTGFSWFNSHLTGSTSWPA*GPPVGC Trigger: ACAGCCGACTGGTGGCCCTCACGCTGGCCAGGAAGT...GCTACCAGTGAGGTGGGAATTAAACCAAGAGAAGCCTGTGGGATTGAAAAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS-3UTR GCA 90 bp | TTTTCCAGGCCCTTTTCAATCCCACAGGCTTCTCTTGGTTTAATTCCCACCTCAGGGAATCCCCGGCTTTaGAACTTCCTGGCCAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: FSRPFSIPQASLGLIPTSGNPRL*NFLASV Trigger: CACGCTGGCCAGGAAGTTGCAAAGCCGGGGATTCCC...TGAGGTGGGAATTAAACCAAGAGAAGCCTGTGGGATTGAAAAGGGCCTGGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS-3UTR CCA 90 bp | TCCAGGCCCTTTTCAATCCCACAGGCTTCTCTTGGTTTAATTCCCACCTCACTGTCCAGGACATTTCCCTaGGAAGGGAATCCCCGGCTT | + |
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Preference number: 4 (lower is better) Translates to: SRPFSIPQASLGLIPTSLSRTFP*EGNPRL Trigger: AAGCCGGGGATTCCCTTCCCAGGGAAATGTCCTGGA...CAGTGAGGTGGGAATTAAACCAAGAGAAGCCTGTGGGATTGAAAAGGGCCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS-3UTR GCA 90 bp | TTCCAGGCCCTTTTCAATCCCACAGGCTTCTCTTGGTTTAATTCCCACCTCACTGGCTGTAACCTTTCCTaGGATGGTCAGGCAGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: FQALFNPTGFSWFNSHLTGCNLS*DGQAGC Trigger: ACACCCTGCCTGACCATCGCAGGAAAGGTTACAGCC...AGTGAGGTGGGAATTAAACCAAGAGAAGCCTGTGGGATTGAAAAGGGCCTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS-3UTR CCA 90 bp | TTTTCCAGGCCCTTTTCAATCCCACAGGCTTCTCTTGGTTTAATTCCCACCTCATACCGCAGGCACTGCTaGTTGCCACCTCGTGACCAA | + |
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Preference number: 4 (lower is better) Translates to: FSRPFSIPQASLGLIPTSYRRHC*LPPRDQ Trigger: TTGGTCACGAGGTGGCAACCAGCAGTGCCTGCGGTA...TGAGGTGGGAATTAAACCAAGAGAAGCCTGTGGGATTGAAAAGGGCCTGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS-3UTR TCA 90 bp | CTTTTCCAGGCCCTTTTCAATCCCACAGGCTTCTCTTGGTTTAATTCCCACCTCGAGAAGATCTGCATCTaGGACACTCAGGTAGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: LFQALFNPTGFSWFNSHLEKICI*DTQVGQ Trigger: CTGACCTACCTGAGTGTCTCAGATGCAGATCTTCTC...GAGGTGGGAATTAAACCAAGAGAAGCCTGTGGGATTGAAAAGGGCCTGGAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS-3UTR CCA 90 bp | GCCCTTTTCAATCCCACAGGCTTCTCTTGGTTTAATTCCCACCTCACTGGTAGCCCGGTTAGGAAACTGTaGTCTGGCACAGATGAAACA | + |
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Preference number: 4 (lower is better) Translates to: ALFNPTGFSWFNSHLTGSPVRKL*SGTDET Trigger: TGTTTCATCTGTGCCAGACCACAGTTTCCTAACCGG...GCTACCAGTGAGGTGGGAATTAAACCAAGAGAAGCCTGTGGGATTGAAAAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS-3UTR TCA 90 bp | TTCCAGGCCCTTTTCAATCCCACAGGCTTCTCTTGGTTTAATTCCCACCTCACTGTGGTCTGGCACAGATaGAACAGGAGAAAAATGGAC | + |
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Preference number: 4 (lower is better) Translates to: FQALFNPTGFSWFNSHLTVVWHR*NRRKMD Trigger: GTCCATTTTTCTCCTGTTTCATCTGTGCCAGACCAC...AGTGAGGTGGGAATTAAACCAAGAGAAGCCTGTGGGATTGAAAAGGGCCTGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS-3UTR CCA 90 bp | TTTTCCAGGCCCTTTTCAATCCCACAGGCTTCTCTTGGTTTAATTCCCACCTCAGATACCCCAGGATACTaGGTTTCCCTTCTCATCACG | + |
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Preference number: 4 (lower is better) Translates to: FSRPFSIPQASLGLIPTSDTPGY*VSLLIT Trigger: CGTGATGAGAAGGGAAACCCAGTATCCTGGGGTATC...TGAGGTGGGAATTAAACCAAGAGAAGCCTGTGGGATTGAAAAGGGCCTGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS-3UTR CCA 90 bp | TTCCAGGCCCTTTTCAATCCCACAGGCTTCTCTTGGTTTAATTCCCACCTCACTGAAACAGGAGAAAAATaGACAGCCTTGAAGGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: FQALFNPTGFSWFNSHLTETGEK*TALKEA Trigger: GGCTTCCTTCAAGGCTGTCCATTTTTCTCCTGTTTC...AGTGAGGTGGGAATTAAACCAAGAGAAGCCTGTGGGATTGAAAAGGGCCTGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS-3UTR CCA 90 bp | TTTTCCAGGCCCTTTTCAATCCCACAGGCTTCTCTTGGTTTAATTCCCACCTCAGGCAAGAACTCAGCTTaGACACTCTTCAGCAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: FSRPFSIPQASLGLIPTSGKNSA*TLFSRF Trigger: AAACCTGCTGAAGAGTGTCCAAGCTGAGTTCTTGCC...TGAGGTGGGAATTAAACCAAGAGAAGCCTGTGGGATTGAAAAGGGCCTGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS-3UTR TCA 90 bp | TCCAGGCCCTTTTCAATCCCACAGGCTTCTCTTGGTTTAATTCCCACCTCACTGTTTGAAGTTTGGCCATaGATCCAATACCACTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: SRPFSIPQASLGLIPTSLFEVWP*IQYHFL Trigger: AAGGAAGTGGTATTGGATTCATGGCCAAACTTCAAA...CAGTGAGGTGGGAATTAAACCAAGAGAAGCCTGTGGGATTGAAAAGGGCCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS-3UTR TCA 90 bp | TCCAGGCCCTTTTCAATCCCACAGGCTTCTCTTGGTTTAATTCCCACCTCACTGGCTGTTGGTAAGCTCTaGTATCTTTGTAGAATACAG | + |
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Preference number: 4 (lower is better) Translates to: SRPFSIPQASLGLIPTSLAVGKL*YLCRIQ Trigger: CTGTATTCTACAAAGATATCAGAGCTTACCAACAGC...CAGTGAGGTGGGAATTAAACCAAGAGAAGCCTGTGGGATTGAAAAGGGCCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS-3UTR CCA 90 bp | TTTTCCAGGCCCTTTTCAATCCCACAGGCTTCTCTTGGTTTAATTCCCACCTCATCTTCAGCAGGTTTATaGAAGCCAGGTTGTCATCCA | + |
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Preference number: 4 (lower is better) Translates to: FSRPFSIPQASLGLIPTSSSAGL*KPGCHP Trigger: TGGATGACAACCTGGCTTCCATAAACCTGCTGAAGA...TGAGGTGGGAATTAAACCAAGAGAAGCCTGTGGGATTGAAAAGGGCCTGGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS-3UTR CCA 90 bp | TTTTCCAGGCCCTTTTCAATCCCACAGGCTTCTCTTGGTTTAATTCCCACCTCAGTCAGAATAAGCCTGTaGAAACGACAAGGCAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: FSRPFSIPQASLGLIPTSVRISL*KRQGKN Trigger: GTTCTTGCCTTGTCGTTTCCACAGGCTTATTCTGAC...TGAGGTGGGAATTAAACCAAGAGAAGCCTGTGGGATTGAAAAGGGCCTGGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS-3UTR TCA 90 bp | TTTTCCAGGCCCTTTTCAATCCCACAGGCTTCTCTTGGTTTAATTCCCACCTCAAGTGATTCAGGAAAGTaGCTCTTCAACATGTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: FSRPFSIPQASLGLIPTSSDSGK*LFNMFS Trigger: GGAGAACATGTTGAAGAGTCACTTTCCTGAATCACT...TGAGGTGGGAATTAAACCAAGAGAAGCCTGTGGGATTGAAAAGGGCCTGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS-3UTR TCA 90 bp | TTCCAGGCCCTTTTCAATCCCACAGGCTTCTCTTGGTTTAATTCCCACCTCACTAATACCACTTCCTTTTaGAAGGGATTTCCACGATTT | + |
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Preference number: 4 (lower is better) Translates to: FQALFNPTGFSWFNSHLTNTTSF*KGFPRF Trigger: AAATCGTGGAAATCCCTTTCAAAAGGAAGTGGTATT...AGTGAGGTGGGAATTAAACCAAGAGAAGCCTGTGGGATTGAAAAGGGCCTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS-3UTR TCA 90 bp | TTTTCCAGGCCCTTTTCAATCCCACAGGCTTCTCTTGGTTTAATTCCCACCTCATGCAACCCTTGTATTTaGAAAACTTGGTCCCAATTA | + |
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Preference number: 4 (lower is better) Translates to: FSRPFSIPQASLGLIPTSCNPCI*KTWSQL Trigger: TAATTGGGACCAAGTTTTTCAAATACAAGGGTTGCA...TGAGGTGGGAATTAAACCAAGAGAAGCCTGTGGGATTGAAAAGGGCCTGGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS-3UTR TCA 90 bp | TTTTCAATCCCACAGGCTTCTCTTGGTTTAATTCCCACCTCACTGGTAGCTAAAACATGTTCTCCAGTATaGATAATTTGGTGGAGCACT | + |
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Preference number: 4 (lower is better) Translates to: FSIPQASLGLIPTSLVAKTCSPV*IIWWST Trigger: AGTGCTCCACCAAATTATTCATACTGGAGAACATGT...TTTAGCTACCAGTGAGGTGGGAATTAAACCAAGAGAAGCCTGTGGGATTGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS TCA 90 bp | TTCCCTGGGAAGGGAATCCCCGGCTTTGCAACTTCCTGGCCAGCGTaGGGGCCACCAGTCGGCTGTAACCTTTCCTGCGATGGTCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: FPGKGIPGFATSWPA*GPPVGCNLSCDGQA Trigger: TGCCTGACCATCGCAGGAAAGGTTACAGCCGACTGGTGGCCCTCACGCTGGCCAGGAAGTTGCAAAGCCGGGGATTCCCTTCCCAGGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS TCA 90 bp | GGTTTCCCTTCTCATCACGCACACACACGCTGGGAAAGCAGGCGATaGGATTGGCCAAGTACCGCAGGCACTGCTGGTTGCCACCTCGTG | + |
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Preference number: 5 (lower is better) Translates to: GFPSHHAHTRWESRR*DWPSTAGTAGCHLV Trigger: CACGAGGTGGCAACCAGCAGTGCCTGCGGTACTTGGCCAATCTCATCGCCTGCTTTCCCAGCGTGTGTGTGCGTGATGAGAAGGGAAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS GCA 90 bp | ACGCTGGGAAAGCAGGCGATGAGATTGGCCAAGTACCGCAGGCACTaGTGGTTGCCACCTCGTGACCAAGTCCGGTTGAGAAGATCTGCA | + |
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Preference number: 5 (lower is better) Translates to: TLGKQAMRLAKYRRH*WLPPRDQVRLRRSA Trigger: TGCAGATCTTCTCAACCGGACTTGGTCACGAGGTGGCAACCAGCAGTGCCTGCGGTACTTGGCCAATCTCATCGCCTGCTTTCCCAGCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS CCA 90 bp | CTGGGAAAGCAGGCGATGAGATTGGCCAAGTACCGCAGGCACTGCTaGTTGCCACCTCGTGACCAAGTCCGGTTGAGAAGATCTGCATCT | + |
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Preference number: 5 (lower is better) Translates to: LGKQAMRLAKYRRHC*LPPRDQVRLRRSAS Trigger: AGATGCAGATCTTCTCAACCGGACTTGGTCACGAGGTGGCAACCAGCAGTGCCTGCGGTACTTGGCCAATCTCATCGCCTGCTTTCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS CCA 90 bp | TTCAGCAGGTTTATGGAAGCCAGGTTGTCATCCAGGACATTTCCCTaGGAAGGGAATCCCCGGCTTTGCAACTTCCTGGCCAGCGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: FSRFMEARLSSRTFP*EGNPRLCNFLASVR Trigger: CCTCACGCTGGCCAGGAAGTTGCAAAGCCGGGGATTCCCTTCCCAGGGAAATGTCCTGGATGACAACCTGGCTTCCATAAACCTGCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS CCA 90 bp | GCCGTGACACATAGTGGCAAACTGATCTGTGATACCCCAGGATACTaGGTTTCCCTTCTCATCACGCACACACACGCTGGGAAAGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: AVTHSGKLICDTPGY*VSLLITHTHAGKAG Trigger: GCCTGCTTTCCCAGCGTGTGTGTGCGTGATGAGAAGGGAAACCCAGTATCCTGGGGTATCACAGATCAGTTTGCCACTATGTGTCACGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS-3UTR CAA 90 bp | TCCAGGCCCTTTTCAATCCCACAGGCTTCTCTTGGTTTAATTCCCACCTCACTGAGGGAATCCCCGGCTTaGCAACTTCCTGGCCAGCGT | + |
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Preference number: 5 (lower is better) Translates to: SRPFSIPQASLGLIPTSLRESPA*QLPGQR Trigger: ACGCTGGCCAGGAAGTTGCAAAGCCGGGGATTCCCT...CAGTGAGGTGGGAATTAAACCAAGAGAAGCCTGTGGGATTGAAAAGGGCCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS CCA 90 bp | GGGGTCAGAATAAGCCTGTGGAAACGACAAGGCAAGAACTCAGCTTaGACACTCTTCAGCAGGTTTATGGAAGCCAGGTTGTCATCCAGG | + |
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Preference number: 5 (lower is better) Translates to: GVRISLWKRQGKNSA*TLFSRFMEARLSSR Trigger: CCTGGATGACAACCTGGCTTCCATAAACCTGCTGAAGAGTGTCCAAGCTGAGTTCTTGCCTTGTCGTTTCCACAGGCTTATTCTGACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS-3UTR CAA 90 bp | GCCCTTTTCAATCCCACAGGCTTCTCTTGGTTTAATTCCCACCTCACTGGTAGCAGGCAAGAACTCAGCTaGGACACTCTTCAGCAGGTT | + |
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Preference number: 5 (lower is better) Translates to: ALFNPTGFSWFNSHLTGSRQELS*DTLQQV Trigger: AACCTGCTGAAGAGTGTCCAAGCTGAGTTCTTGCCT...GCTACCAGTGAGGTGGGAATTAAACCAAGAGAAGCCTGTGGGATTGAAAAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS-3UTR CAA 90 bp | TCCAGGCCCTTTTCAATCCCACAGGCTTCTCTTGGTTTAATTCCCACCTCACTGCGGGTGATGATAACTTaGAAGTTTGGCCATGAATCC | + |
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Preference number: 5 (lower is better) Translates to: SRPFSIPQASLGLIPTSLRVMIT*KFGHES Trigger: GGATTCATGGCCAAACTTCAAAGTTATCATCACCCG...CAGTGAGGTGGGAATTAAACCAAGAGAAGCCTGTGGGATTGAAAAGGGCCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS-3UTR CAA 90 bp | TTTTCCAGGCCCTTTTCAATCCCACAGGCTTCTCTTGGTTTAATTCCCACCTCACCAAATCTAACAGCCTaGCTTTGGCAACGGCTTTGG | + |
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Preference number: 5 (lower is better) Translates to: FSRPFSIPQASLGLIPTSPNLTA*LWQRLW Trigger: CCAAAGCCGTTGCCAAAGCAAGGCTGTTAGATTTGG...TGAGGTGGGAATTAAACCAAGAGAAGCCTGTGGGATTGAAAAGGGCCTGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS-3UTR CAA 90 bp | TTTTCCAGGCCCTTTTCAATCCCACAGGCTTCTCTTGGTTTAATTCCCACCTCAAAAGGTGAGCTTGTCTaGAGAAAGCTGCAGGGGTCA | + |
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Preference number: 5 (lower is better) Translates to: FSRPFSIPQASLGLIPTSKGELV*RKLQGS Trigger: TGACCCCTGCAGCTTTCTCAAGACAAGCTCACCTTT...TGAGGTGGGAATTAAACCAAGAGAAGCCTGTGGGATTGAAAAGGGCCTGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS-3UTR CAA 90 bp | TTTTCAATCCCACAGGCTTCTCTTGGTTTAATTCCCACCTCACTGGTAGCTAAACGTGACCAAGTCCGGTaGAGAAGATCTGCATCTGAG | + |
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Preference number: 5 (lower is better) Translates to: FSIPQASLGLIPTSLVAKRDQVR*RRSASE Trigger: CTCAGATGCAGATCTTCTCAACCGGACTTGGTCACG...TTTAGCTACCAGTGAGGTGGGAATTAAACCAAGAGAAGCCTGTGGGATTGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS TCA 90 bp | AGCCTCTCTCTCTCGCCGGGTGATGATAACTTTGAAGTTTGGCCATaGATCCAATACCACTTCCTTTTGAAAGGGATTTCCACGATTTAT | + |
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Preference number: 5 (lower is better) Translates to: SLSLSPGDDNFEVWP*IQYHFLLKGISTIY Trigger: ATAAATCGTGGAAATCCCTTTCAAAAGGAAGTGGTATTGGATTCATGGCCAAACTTCAAAGTTATCATCACCCGGCGAGAGAGAGAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS-3UTR CAA 90 bp | TTTTCCAGGCCCTTTTCAATCCCACAGGCTTCTCTTGGTTTAATTCCCACCTCACAATACCACTTCCTTTaGAAAGGGATTTCCACGATT | + |
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Preference number: 5 (lower is better) Translates to: FSRPFSIPQASLGLIPTSQYHFL*KGISTI Trigger: AATCGTGGAAATCCCTTTCAAAAGGAAGTGGTATTG...TGAGGTGGGAATTAAACCAAGAGAAGCCTGTGGGATTGAAAAGGGCCTGGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS-3UTR CAA 90 bp | TTTTCCAGGCCCTTTTCAATCCCACAGGCTTCTCTTGGTTTAATTCCCACCTCAGAAAAATGGACAGCCTaGAAGGAAGCCAAATTTATA | + |
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Preference number: 5 (lower is better) Translates to: FSRPFSIPQASLGLIPTSEKWTA*KEAKFI Trigger: TATAAATTTGGCTTCCTTCAAGGCTGTCCATTTTTC...TGAGGTGGGAATTAAACCAAGAGAAGCCTGTGGGATTGAAAAGGGCCTGGAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS-3UTR CAA 90 bp | TTTTCAATCCCACAGGCTTCTCTTGGTTTAATTCCCACCTCACTGGTAGCTAAATTGCAACCCTTGTATTaGAAAAACTTGGTCCCAATT | + |
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Preference number: 5 (lower is better) Translates to: FSIPQASLGLIPTSLVAKLQPLY*KNLVPI Trigger: AATTGGGACCAAGTTTTTCAAATACAAGGGTTGCAA...TTTAGCTACCAGTGAGGTGGGAATTAAACCAAGAGAAGCCTGTGGGATTGAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS TCA 90 bp | ACGGCTTTGGAAGCAGCATATAATTCACTTTGCAACCCTTGTATTTaGAAAACTTGGTCCCAATTAATAACATCATGTTCTTCCAATAGC | + |
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Preference number: 5 (lower is better) Translates to: TALEAAYNSLCNPCI*KTWSQLITSCSSNS Trigger: GCTATTGGAAGAACATGATGTTATTAATTGGGACCAAGTTTTTCAAATACAAGGGTTGCAAAGTGAATTATATGCTGCTTCCAAAGCCGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS GCA 72 bp | TCCAGGACATTTCCCTGGGAAGGGAATCCCCGGCTTTaGAACTTCCTGGCCAGCGTGAGGGCCACCAGTCGG | + |
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Preference number: 6 (lower is better) Translates to: SRTFPWEGNPRL*NFLASVRATSR Trigger: CCGACTGGTGGCCCTCACGCTGGCCAGGAAGTTGCAAAGCCGGGGATTCCCTTCCCAGGGAAATGTCCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS CAA 72 bp | ATCCAGGACATTTCCCTGGGAAGGGAATCCCCGGCTTaGCAACTTCCTGGCCAGCGTGAGGGCCACCAGTCG | + |
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Preference number: 6 (lower is better) Translates to: IQDISLGRESPA*QLPGQREGHQS Trigger: CGACTGGTGGCCCTCACGCTGGCCAGGAAGTTGCAAAGCCGGGGATTCCCTTCCCAGGGAAATGTCCTGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS CAA 90 bp | CAGGTTGTCATCCAGGACATTTCCCTGGGAAGGGAATCCCCGGCTTaGCAACTTCCTGGCCAGCGTGAGGGCCACCAGTCGGCTGTAACC | + |
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Preference number: 6 (lower is better) Translates to: QVVIQDISLGRESPA*QLPGQREGHQSAVT Trigger: GGTTACAGCCGACTGGTGGCCCTCACGCTGGCCAGGAAGTTGCAAAGCCGGGGATTCCCTTCCCAGGGAAATGTCCTGGATGACAACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS TCA 72 bp | AAGGGAATCCCCGGCTTTGCAACTTCCTGGCCAGCGTaGGGGCCACCAGTCGGCTGTAACCTTTCCTGCGAT | + |
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Preference number: 6 (lower is better) Translates to: KGIPGFATSWPA*GPPVGCNLSCD Trigger: ATCGCAGGAAAGGTTACAGCCGACTGGTGGCCCTCACGCTGGCCAGGAAGTTGCAAAGCCGGGGATTCCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS CAA 90 bp | CCCTTCTCATCACGCACACACACGCTGGGAAAGCAGGCGATGAGATaGGCCAAGTACCGCAGGCACTGCTGGTTGCCACCTCGTGACCAA | + |
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Preference number: 6 (lower is better) Translates to: PFSSRTHTLGKQAMR*AKYRRHCWLPPRDQ Trigger: TTGGTCACGAGGTGGCAACCAGCAGTGCCTGCGGTACTTGGCCAATCTCATCGCCTGCTTTCCCAGCGTGTGTGTGCGTGATGAGAAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS TCA 72 bp | TCTCATCACGCACACACACGCTGGGAAAGCAGGCGATaGGATTGGCCAAGTACCGCAGGCACTGCTGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: SHHAHTRWESRR*DWPSTAGTAGC Trigger: GCAACCAGCAGTGCCTGCGGTACTTGGCCAATCTCATCGCCTGCTTTCCCAGCGTGTGTGTGCGTGATGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS GCA 72 bp | AAGCAGGCGATGAGATTGGCCAAGTACCGCAGGCACTaGTGGTTGCCACCTCGTGACCAAGTCCGGTTGAGA | + |
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Preference number: 6 (lower is better) Translates to: KQAMRLAKYRRH*WLPPRDQVRLR Trigger: TCTCAACCGGACTTGGTCACGAGGTGGCAACCAGCAGTGCCTGCGGTACTTGGCCAATCTCATCGCCTGCTT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS CCA 72 bp | CAGGCGATGAGATTGGCCAAGTACCGCAGGCACTGCTaGTTGCCACCTCGTGACCAAGTCCGGTTGAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: QAMRLAKYRRHC*LPPRDQVRLRR Trigger: TCTTCTCAACCGGACTTGGTCACGAGGTGGCAACCAGCAGTGCCTGCGGTACTTGGCCAATCTCATCGCCTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS CAA 90 bp | GGAAAGCAGGCGATGAGATTGGCCAAGTACCGCAGGCACTGCTGGTaGCCACCTCGTGACCAAGTCCGGTTGAGAAGATCTGCATCTGAG | + |
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Preference number: 6 (lower is better) Translates to: GKQAMRLAKYRRHCW*PPRDQVRLRRSASE Trigger: CTCAGATGCAGATCTTCTCAACCGGACTTGGTCACGAGGTGGCAACCAGCAGTGCCTGCGGTACTTGGCCAATCTCATCGCCTGCTTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS CAA 72 bp | CTGCATCTGAGACACTCAGGTAGGTCAGTCTCGGGGTaGGCCCGGTTAGGAAACTGTGGTCTGGCACAGATG | + |
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Preference number: 6 (lower is better) Translates to: LHLRHSGRSVSG*ARLGNCGLAQM Trigger: CATCTGTGCCAGACCACAGTTTCCTAACCGGGCCAACCCCGAGACTGACCTACCTGAGTGTCTCAGATGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS CAA 72 bp | GCGATGAGATTGGCCAAGTACCGCAGGCACTGCTGGTaGCCACCTCGTGACCAAGTCCGGTTGAGAAGATCT | + |
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Preference number: 6 (lower is better) Translates to: AMRLAKYRRHCW*PPRDQVRLRRS Trigger: AGATCTTCTCAACCGGACTTGGTCACGAGGTGGCAACCAGCAGTGCCTGCGGTACTTGGCCAATCTCATCGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS CCA 72 bp | TTTATGGAAGCCAGGTTGTCATCCAGGACATTTCCCTaGGAAGGGAATCCCCGGCTTTGCAACTTCCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: FMEARLSSRTFP*EGNPRLCNFLA Trigger: GGCCAGGAAGTTGCAAAGCCGGGGATTCCCTTCCCAGGGAAATGTCCTGGATGACAACCTGGCTTCCATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS CCA 72 bp | CATAGTGGCAAACTGATCTGTGATACCCCAGGATACTaGGTTTCCCTTCTCATCACGCACACACACGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: HSGKLICDTPGY*VSLLITHTHAG Trigger: CCCAGCGTGTGTGTGCGTGATGAGAAGGGAAACCCAGTATCCTGGGGTATCACAGATCAGTTTGCCACTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS CAA 72 bp | GCTTGGACACTCTTCAGCAGGTTTATGGAAGCCAGGTaGTCATCCAGGACATTTCCCTGGGAAGGGAATCCC | + |
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Preference number: 6 (lower is better) Translates to: AWTLFSRFMEAR*SSRTFPWEGNP Trigger: GGGATTCCCTTCCCAGGGAAATGTCCTGGATGACAACCTGGCTTCCATAAACCTGCTGAAGAGTGTCCAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS CAA 90 bp | AAGAACTCAGCTTGGACACTCTTCAGCAGGTTTATGGAAGCCAGGTaGTCATCCAGGACATTTCCCTGGGAAGGGAATCCCCGGCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: KNSAWTLFSRFMEAR*SSRTFPWEGNPRLC Trigger: GCAAAGCCGGGGATTCCCTTCCCAGGGAAATGTCCTGGATGACAACCTGGCTTCCATAAACCTGCTGAAGAGTGTCCAAGCTGAGTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS CCA 72 bp | GCAAGAACTCAGCTTGGACACTCTTCAGCAGGTTTATaGAAGCCAGGTTGTCATCCAGGACATTTCCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: ARTQLGHSSAGL*KPGCHPGHFPG Trigger: CCCAGGGAAATGTCCTGGATGACAACCTGGCTTCCATAAACCTGCTGAAGAGTGTCCAAGCTGAGTTCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS CAA 90 bp | AGGGGTCAGAATAAGCCTGTGGAAACGACAAGGCAAGAACTCAGCTaGGACACTCTTCAGCAGGTTTATGGAAGCCAGGTTGTCATCCAG | + |
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Preference number: 6 (lower is better) Translates to: RGQNKPVETTRQELS*DTLQQVYGSQVVIQ Trigger: CTGGATGACAACCTGGCTTCCATAAACCTGCTGAAGAGTGTCCAAGCTGAGTTCTTGCCTTGTCGTTTCCACAGGCTTATTCTGACCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS CCA 72 bp | TGTCTTGAGAAAGCTGCAGGGGTCAGAATAAGCCTGTaGAAACGACAAGGCAAGAACTCAGCTTGGACACTC | + |
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Preference number: 6 (lower is better) Translates to: CLEKAAGVRISL*KRQGKNSAWTL Trigger: GAGTGTCCAAGCTGAGTTCTTGCCTTGTCGTTTCCACAGGCTTATTCTGACCCCTGCAGCTTTCTCAAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS CCA 72 bp | ATAAGCCTGTGGAAACGACAAGGCAAGAACTCAGCTTaGACACTCTTCAGCAGGTTTATGGAAGCCAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: ISLWKRQGKNSA*TLFSRFMEARL Trigger: CAACCTGGCTTCCATAAACCTGCTGAAGAGTGTCCAAGCTGAGTTCTTGCCTTGTCGTTTCCACAGGCTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS CAA 72 bp | AATAAGCCTGTGGAAACGACAAGGCAAGAACTCAGCTaGGACACTCTTCAGCAGGTTTATGGAAGCCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: NKPVETTRQELS*DTLQQVYGSQV Trigger: AACCTGGCTTCCATAAACCTGCTGAAGAGTGTCCAAGCTGAGTTCTTGCCTTGTCGTTTCCACAGGCTTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS TCA 72 bp | CTCTCGCCGGGTGATGATAACTTTGAAGTTTGGCCATaGATCCAATACCACTTCCTTTTGAAAGGGATTTCC | + |
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Preference number: 6 (lower is better) Translates to: LSPGDDNFEVWP*IQYHFLLKGIS Trigger: GGAAATCCCTTTCAAAAGGAAGTGGTATTGGATTCATGGCCAAACTTCAAAGTTATCATCACCCGGCGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS CCA 72 bp | TATCCAAATCTAACAGCCTTGCTTTGGCAACGGCTTTaGAAGCAGCATATAATTCACTTTGCAACCCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: YPNLTALLWQRL*KQHIIHFATLV Trigger: TACAAGGGTTGCAAAGTGAATTATATGCTGCTTCCAAAGCCGTTGCCAAAGCAAGGCTGTTAGATTTGGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS TCA 72 bp | TTGAAGTTTGGCCATGAATCCAATACCACTTCCTTTTaGAAGGGATTTCCACGATTTATGTTCATCACTGCT | + |
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Preference number: 6 (lower is better) Translates to: LKFGHESNTTSF*KGFPRFMFITA Trigger: AGCAGTGATGAACATAAATCGTGGAAATCCCTTTCAAAAGGAAGTGGTATTGGATTCATGGCCAAACTTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS CAA 72 bp | GAAGCCAAATTTATATCCAAATCTAACAGCCTTGCTTaGGCAACGGCTTTGGAAGCAGCATATAATTCACTT | + |
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Preference number: 6 (lower is better) Translates to: EAKFISKSNSLA*ATALEAAYNSL Trigger: AAGTGAATTATATGCTGCTTCCAAAGCCGTTGCCAAAGCAAGGCTGTTAGATTTGGATATAAATTTGGCTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS GCA 72 bp | TTGGTAAGCTCTGATATCTTTGTAGAATACAGCATATaGATTAGTGTAATGGTCAAGGTTATCTGTCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: LVSSDIFVEYSI*ISVMVKVICLS Trigger: GCTGAGACAGATAACCTTGACCATTACACTAATGCATATGCTGTATTCTACAAAGATATCAGAGCTTACCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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| CDS CCA 72 bp | AAGCCAAATTTATATCCAAATCTAACAGCCTTGCTTTaGCAACGGCTTTGGAAGCAGCATATAATTCACTTT | + |
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Preference number: 6 (lower is better) Translates to: KPNLYPNLTALL*QRLWKQHIIHF Trigger: AAAGTGAATTATATGCTGCTTCCAAAGCCGTTGCCAAAGCAAGGCTGTTAGATTTGGATATAAATTTGGCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166343.3 |
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