Pregenerated sensors for GLYAT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063683Ensembl transcript IDs: ENSMUST00000044976.12, ENSMUST00000119960.2
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATTGAACTCAGGACCTCTGGAAGAGAAGACAATGCTCTTCCCCACTaGGCCATCTCTCCAGCCCCCTCCACTTTATTTCTTGAGACATGG | + |
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Preference number: 1 (lower is better) Translates to: IELRTSGREDNALPH*AISPAPSTLFLETW Trigger: CCATGTCTCAAGAAATAAAGTGGAGGGGGCTGGAGAGATGGCTCAGTGGGGAAGAGCATTGTCTTCTCTTCCAGAGGTCCTGAGTTCAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119960.2 |
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| 3UTR TCA 90 bp | TCAGACACACCAGAAGAGGCCATCAGATCCCATTACAGATGGTTGTaGGCCACAATGTGGTGGCTGAGAATTGAACTCAGGACCTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: SDTPEEAIRSHYRWL*ATMWWLRIELRTSG Trigger: TCCAGAGGTCCTGAGTTCAATTCTCAGCCACCACATTGTGGCTCACAACCATCTGTAATGGGATCTGATGGCCTCTTCTGGTGTGTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119960.2 |
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| 3UTR CCA 90 bp | CATTTGGAGCCCTGTGCAACTGATAAAGGAGTATCATATAGATCCTaGGAATGTGAAGGAGCTAAATTACTACTTCAGAGTTCACTACTG | + |
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Preference number: 1 (lower is better) Translates to: HLEPCATDKGVSYRS*ECEGAKLLLQSSLL Trigger: CAGTAGTGAACTCTGAAGTAGTAATTTAGCTCCTTCACATTCCCAGGATCTATATGATACTCCTTTATCAGTTGCACAGGGCTCCAAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTCCCCCAGTGCTATGGTTTCAGGTACACATAGCCATGCCCAGCTTTTACTGATAAGTGTTCAAGCTTaGCTTCTCTGCCCTCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: SSPSAMVSGTHSHAQLLLISVQA*LLCPQL Trigger: GAGCTGAGGGCAGAGAAGCCAAGCTTGAACACTTAT...CAGTAAAAGCTGGGCATGGCTATGTGTACCTGAAACCATAGCACTGGGGGAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119960.2 |
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| 3UTR CAA 90 bp | GACAATAAGTGTTCAAGCTTGGCTTCTCTGCCCTCAGCTCCTACCTaGATATACCCATACTGTACTCTCTATAACTCACCCCTTGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: DNKCSSLASLPSAPT*IYPYCTLYNSPLAL Trigger: GAGAGCAAGGGGTGAGTTATAGAGAGTACAGTATGGGTATATCAAGGTAGGAGCTGAGGGCAGAGAAGCCAAGCTTGAACACTTATTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTCCCCCAGTGCTATGGTTTCAGGTACACATAGCCATGCCCAGCTTTTACTGATTAATTCAGAATTATaGAGGCTGCCAGACAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: SSPSAMVSGTHSHAQLLLINSEL*RLPDRA Trigger: GGCTCTGTCTGGCAGCCTGCATAATTCTGAATTAAT...CAGTAAAAGCTGGGCATGGCTATGTGTACCTGAAACCATAGCACTGGGGGAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119960.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCTGCCCTCAGCTCCTACCTTGATATACCCATACTGTACTCTCTATAACTCACTTTGGCAGATCTGTTaGCCATTCACACTGCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: SLPSAPTLIYPYCTLYNSLWQIC*PFTLLP Trigger: GGGAAGCAGTGTGAATGGCCAACAGATCTGCCAAAG...TGAGTTATAGAGAGTACAGTATGGGTATATCAAGGTAGGAGCTGAGGGCAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| 3UTR CAA 90 bp | CTCTTCCCCACTGAGCCATCTCTCCAGCCCCCTCCACTTTATTTCTaGAGACATGGTCTCTCAATAAACCAGAATGTAACTGATTTGGTT | + |
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Preference number: 2 (lower is better) Translates to: LFPTEPSLQPPPLYF*RHGLSINQNVTDLV Trigger: AACCAAATCAGTTACATTCTGGTTTATTGAGAGACCATGTCTCAAGAAATAAAGTGGAGGGGGCTGGAGAGATGGCTCAGTGGGGAAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119960.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTCCCCCAGTGCTATGGTTTCAGGTACACATAGCCATGCCCAGCTTTTACTGGCAGTGGATAAATGCTaGTTTTCAGCAACACACAAA | + |
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Preference number: 2 (lower is better) Translates to: SSPSAMVSGTHSHAQLLLAVDKC*FSATHK Trigger: TTTGTGTGTTGCTGAAAAGCAGCATTTATCCACTGC...CAGTAAAAGCTGGGCATGGCTATGTGTACCTGAAACCATAGCACTGGGGGAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000119960.2 |
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| 3UTR-3UTR CCA 90 bp | AACATCCCCTGCCTATCACTAGCAAGAGTAACAGTAGTCTACAAGTTTTGTGCTCTAGGAGGAGCCATTTaGAGCCCTGTGCAACTGATA | + |
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Preference number: 2 (lower is better) Translates to: NIPCLSLARVTVVYKFCALGGAI*SPVQLI Trigger: TATCAGTTGCACAGGGCTCCAAATGGCTCCTCCTAG...AGCACAAAACTTGTAGACTACTGTTACTCTTGCTAGTGATAGGCAGGGGATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTCTCCAGCCCCCTCCACTTTATTTCTTGAGACATGGTCTCTCAATAAACCAAGTCTAGGAGTAATCTaGCAAAAGGGAGCTTTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: ISPAPSTLFLETWSLNKPSLGVI*QKGALA Trigger: TGCCAAAGCTCCCTTTTGTCAGATTACTCCTAGACT...TGGTTTATTGAGAGACCATGTCTCAAGAAATAAAGTGGAGGGGGCTGGAGAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119960.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTCCCCCAGTGCTATGGTTTCAGGTACACATAGCCATGCCCAGCTTTTACTGTCCATATATAATGTATaGAACACCCAACAGAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: SSPSAMVSGTHSHAQLLLSIYNV*NTQQRN Trigger: GTTCCTCTGTTGGGTGTTTCATACATTATATATGGA...CAGTAAAAGCTGGGCATGGCTATGTGTACCTGAAACCATAGCACTGGGGGAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119960.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTCTCCAGCCCCCTCCACTTTATTTCTTGAGACATGGTCTCTCAATAAACCACAGAATTATGCAGGCTaGCAGACAGAGCCAAACTTT | + |
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Preference number: 2 (lower is better) Translates to: ISPAPSTLFLETWSLNKPQNYAG*QTEPNF Trigger: AAAGTTTGGCTCTGTCTGGCAGCCTGCATAATTCTG...TGGTTTATTGAGAGACCATGTCTCAAGAAATAAAGTGGAGGGGGCTGGAGAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119960.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCTCCAGCCCCCTCCACTTTATTTCTTGAGACATGGTCTCTCAATAAACCAGCAGCTTTTACTGACATaGTGGGGATTTGATTCTAGG | + |
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Preference number: 2 (lower is better) Translates to: SLQPPPLYFLRHGLSINQQLLLT*WGFDSR Trigger: CCTAGAATCAAATCCCCAGCATGTCAGTAAAAGCTG...CTGGTTTATTGAGAGACCATGTCTCAAGAAATAAAGTGGAGGGGGCTGGAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000119960.2 |
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| 3UTR-3UTR GCA 90 bp | GTATCATATAGATCCTGGGAATGTGAAGGAGCTAAATTACTACTTCAGAGTTCAGTTGGCCATTCACACTaGTTCCCCAGAGGACAGACA | + |
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Preference number: 2 (lower is better) Translates to: VSYRSWECEGAKLLLQSSVGHSH*FPRGQT Trigger: TGTCTGTCCTCTGGGGAAGCAGTGTGAATGGCCAAC...TGAACTCTGAAGTAGTAATTTAGCTCCTTCACATTCCCAGGATCTATATGATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAATTGGGAAATTAATTCAGAATTATGCAGGCTGCCAGACAGAGCCAAACTTCTTTGGCAGATCTGTTaGCCATTCACACTGCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: RNWEINSELCRLPDRAKLLWQIC*PFTLLP Trigger: GGGAAGCAGTGTGAATGGCCAACAGATCTGCCAAAG...AAGTTTGGCTCTGTCTGGCAGCCTGCATAATTCTGAATTAATTTCCCAATTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119960.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCTGCCCTCAGCTCCTACCTTGATATACCCATACTGTACTCTCTATAACTCAACAAGTTTTGTGCTATaGCTTCTAGGAGGAGCCATT | + |
|
Preference number: 2 (lower is better) Translates to: SLPSAPTLIYPYCTLYNSTSFVL*LLGGAI Trigger: AATGGCTCCTCCTAGAAGCCATAGCACAAAACTTGT...TGAGTTATAGAGAGTACAGTATGGGTATATCAAGGTAGGAGCTGAGGGCAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| 3UTR-3UTR CCA 90 bp | ACCTTGATATACCCATACTGTACTCTCTATAACTCACCCCTTGCTCTCCTTAGCGTATCATATAGATCCTaGGAATGTGAAGGAGCTAAA | + |
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Preference number: 2 (lower is better) Translates to: TLIYPYCTLYNSPLALLSVSYRS*ECEGAK Trigger: TTTAGCTCCTTCACATTCCCAGGATCTATATGATAC...GCTAAGGAGAGCAAGGGGTGAGTTATAGAGAGTACAGTATGGGTATATCAAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTCTCCAGCCCCCTCCACTTTATTTCTTGAGACATGGTCTCTCAATAAACCAGTATCATATAGATCCTaGGAATGTGAAGGAGCTAAA | + |
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Preference number: 2 (lower is better) Translates to: ISPAPSTLFLETWSLNKPVSYRS*ECEGAK Trigger: TTTAGCTCCTTCACATTCCCAGGATCTATATGATAC...TGGTTTATTGAGAGACCATGTCTCAAGAAATAAAGTGGAGGGGGCTGGAGAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119960.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCAGCAACACACAAACAGTAAAGCCAATCCTGAAGAAAATTTATGGCTTTTGAGTCTAGGAGTAATCTaGCAAAAGGGAGCTTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: FQQHTNSKANPEENLWLLSLGVI*QKGALA Trigger: TGCCAAAGCTCCCTTTTGTCAGATTACTCCTAGACT...CAAAAGCCATAAATTTTCTTCAGGATTGGCTTTACTGTTTGTGTGTTGCTGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| 3UTR-3UTR CCA 90 bp | GTATACTCAGTCAGTTCACTGACTGAGATGAATCTGGTAAATGTGACTTCTGTTACATCAGAAGTAATGTaGCAAGAAGAGATGAGACAA | + |
|
Preference number: 2 (lower is better) Translates to: VYSVSSLTEMNLVNVTSVTSEVM*QEEMRQ Trigger: TTGTCTCATCTCTTCTTGCCACATTACTTCTGATGT...AACAGAAGTCACATTTACCAGATTCATCTCAGTCAGTGAACTGACTGAGTATAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCAGCAACACACAAACAGTAAAGCCAATCCTGAAGAAAATTTATGGCTTTTGAGACTCTTGCTTTCTTaGAGAAATTGGCTCCTTTAT | + |
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Preference number: 2 (lower is better) Translates to: FQQHTNSKANPEENLWLLRLLLS*RNWLLY Trigger: ATAAAGGAGCCAATTTCTCCAAGAAAGCAAGAGTCT...CAAAAGCCATAAATTTTCTTCAGGATTGGCTTTACTGTTTGTGTGTTGCTGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| 3UTR-3UTR CAA 90 bp | TGTGCTATGGCTTCTAGGAGGAGCCATTTGGAGCCCTGTGCAACTGATAAAGGAGCTTTGGCAGATCTGTaGGCCATTCACACTGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: CAMASRRSHLEPCATDKGALADL*AIHTAS Trigger: GGAAGCAGTGTGAATGGCCAACAGATCTGCCAAAGC...TCCTTTATCAGTTGCACAGGGCTCCAAATGGCTCCTCCTAGAAGCCATAGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| 3UTR TCA 72 bp | CCAGAAGAGGCCATCAGATCCCATTACAGATGGTTGTaGGCCACAATGTGGTGGCTGAGAATTGAACTCAGG | + |
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Preference number: 3 (lower is better) Translates to: PEEAIRSHYRWL*ATMWWLRIELR Trigger: CCTGAGTTCAATTCTCAGCCACCACATTGTGGCTCACAACCATCTGTAATGGGATCTGATGGCCTCTTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119960.2 |
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| 3UTR GCA 72 bp | AAAGGGAGCTTTGGCAGATCTGTTGGCCATTCACACTaGTTCCCCAGAGGACAGACAGAAACTCTCTTTTGC | + |
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Preference number: 3 (lower is better) Translates to: KGSFGRSVGHSH*FPRGQTETLFC Trigger: GCAAAAGAGAGTTTCTGTCTGTCCTCTGGGGAAGCAGTGTGAATGGCCAACAGATCTGCCAAAGCTCCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| 3UTR TCA 72 bp | CAGATGGTTGTGAGCCACAATGTGGTGGCTGAGAATTaGACTCAGGACCTCTGGAAGAGAAGACAATGCTCT | + |
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Preference number: 3 (lower is better) Translates to: QMVVSHNVVAEN*TQDLWKRRQCS Trigger: AGAGCATTGTCTTCTCTTCCAGAGGTCCTGAGTTCAATTCTCAGCCACCACATTGTGGCTCACAACCATCTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119960.2 |
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| 3UTR-3UTR CAA 90 bp | AATGTGGCAAGAAGAGATGAGACAATAAGTGTTCAAGCTTGGCTTCTCTGCCCTTCTAGGAGGAGCCATTaGGAGCCCTGTGCAACTGAT | + |
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Preference number: 3 (lower is better) Translates to: NVARRDETISVQAWLLCPSRRSH*EPCATD Trigger: ATCAGTTGCACAGGGCTCCAAATGGCTCCTCCTAGA...AGGGCAGAGAAGCCAAGCTTGAACACTTATTGTCTCATCTCTTCTTGCCACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCTCCAGCCCCCTCCACTTTATTTCTTGAGACATGGTCTCTCAATAAACCAGAATAAGTGTTCAAGCTaGGCTTCTCTGCCCTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: SLQPPPLYFLRHGLSINQNKCSS*ASLPSA Trigger: AGCTGAGGGCAGAGAAGCCAAGCTTGAACACTTATT...CTGGTTTATTGAGAGACCATGTCTCAAGAAATAAAGTGGAGGGGGCTGGAGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119960.2 |
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| 3UTR-3UTR CAA 90 bp | TCTTCCCCCAGTGCTATGGTTTCAGGTACACATAGCCATGCCCAGCTTTTACTGCAGACTCTTGCTTTCTaGGAGAAATTGGCTCCTTTA | + |
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Preference number: 3 (lower is better) Translates to: SSPSAMVSGTHSHAQLLLQTLAF*EKLAPL Trigger: TAAAGGAGCCAATTTCTCCAAGAAAGCAAGAGTCTG...CAGTAAAAGCTGGGCATGGCTATGTGTACCTGAAACCATAGCACTGGGGGAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119960.2 |
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| 3UTR TCA 72 bp | TGGTTTCAGGTACACATAGCCATGCCCAGCTTTTACTaGCATGCTGGGGATTTGATTCTAGGTCCTCTTGCT | + |
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Preference number: 3 (lower is better) Translates to: WFQVHIAMPSFY*HAGDLILGPLA Trigger: AGCAAGAGGACCTAGAATCAAATCCCCAGCATGTCAGTAAAAGCTGGGCATGGCTATGTGTACCTGAAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119960.2 |
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| 3UTR CCA 72 bp | GGTACACATAGCCATGCCCAGCTTTTACTGACATGCTaGGGATTTGATTCTAGGTCCTCTTGCTTTCAAAGC | + |
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Preference number: 3 (lower is better) Translates to: GTHSHAQLLLTC*GFDSRSSCFQS Trigger: GCTTTGAAAGCAAGAGGACCTAGAATCAAATCCCCAGCATGTCAGTAAAAGCTGGGCATGGCTATGTGTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119960.2 |
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| 3UTR GCA 72 bp | TCAGGTACACATAGCCATGCCCAGCTTTTACTGACATaGTGGGGATTTGATTCTAGGTCCTCTTGCTTTCAA | + |
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Preference number: 3 (lower is better) Translates to: SGTHSHAQLLLT*WGFDSRSSCFQ Trigger: TTGAAAGCAAGAGGACCTAGAATCAAATCCCCAGCATGTCAGTAAAAGCTGGGCATGGCTATGTGTACCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119960.2 |
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| 3UTR CCA 72 bp | GTGAGTTTATTTCTCCTCATTCTTCCCCCAGTGCTATaGTTTCAGGTACACATAGCCATGCCCAGCTTTTAC | + |
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Preference number: 3 (lower is better) Translates to: VSLFLLILPPVL*FQVHIAMPSFY Trigger: GTAAAAGCTGGGCATGGCTATGTGTACCTGAAACCATAGCACTGGGGGAAGAATGAGGAGAAATAAACTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119960.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCTGCCCTCAGCTCCTACCTTGATATACCCATACTGTACTCTCTATAACTCAACAAGGAGAATGTACTaGCTGATCACCAAGGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: SLPSAPTLIYPYCTLYNSTRRMY*LITKGK Trigger: CTTTCCCTTGGTGATCAGCAAGTACATTCTCCTTGT...TGAGTTATAGAGAGTACAGTATGGGTATATCAAGGTAGGAGCTGAGGGCAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| 3UTR TCA 72 bp | CAAACTCAGGAACTTAAGGGAAGTCTAGGAGTAATCTaGCAAAAGGGAGCTTTGGCAGATCTGTTGGCCATT | + |
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Preference number: 3 (lower is better) Translates to: QTQELKGSLGVI*QKGALADLLAI Trigger: AATGGCCAACAGATCTGCCAAAGCTCCCTTTTGTCAGATTACTCCTAGACTTCCCTTAAGTTCCTGAGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCAGCAACACACAAACAGTAAAGCCAATCCTGAAGAAAATTTATGGCTTTTGTCTAGGAGGAGCCATTaGGAGCCCTGTGCAACTGAT | + |
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Preference number: 3 (lower is better) Translates to: FQQHTNSKANPEENLWLLSRRSH*EPCATD Trigger: ATCAGTTGCACAGGGCTCCAAATGGCTCCTCCTAGA...CAAAAGCCATAAATTTTCTTCAGGATTGGCTTTACTGTTTGTGTGTTGCTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| 3UTR TCA 72 bp | GGACGAAAAAGCCTTCCCACCATGATGATAATAGACTaGACCTCTGAAACTATAAGCCAGACCCAGTTAAAT | + |
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Preference number: 3 (lower is better) Translates to: GRKSLPTMMIID*TSETISQTQLN Trigger: ATTTAACTGGGTCTGGCTTATAGTTTCAGAGGTTCAGTCTATTATCATCATGGTGGGAAGGCTTTTTCGTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| 3UTR-3UTR CAA 90 bp | ACCTTGATATACCCATACTGTACTCTCTATAACTCACCCCTTGCTCTCCTTAGCACTGGAAAACCAAAATaGGACTGTTCTTTAGTGTCT | + |
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Preference number: 3 (lower is better) Translates to: TLIYPYCTLYNSPLALLSTGKPK*DCSLVS Trigger: AGACACTAAAGAACAGTCCAATTTTGGTTTTCCAGT...GCTAAGGAGAGCAAGGGGTGAGTTATAGAGAGTACAGTATGGGTATATCAAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| 3UTR CCA 72 bp | CCCTGTGCAACTGATAAAGGAGTATCATATAGATCCTaGGAATGTGAAGGAGCTAAATTACTACTTCAGAGT | + |
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Preference number: 3 (lower is better) Translates to: PCATDKGVSYRS*ECEGAKLLLQS Trigger: ACTCTGAAGTAGTAATTTAGCTCCTTCACATTCCCAGGATCTATATGATACTCCTTTATCAGTTGCACAGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| 3UTR TCA 72 bp | AAGCCTTCCCACCATGATGATAATAGACTGAACCTCTaGAACTATAAGCCAGACCCAGTTAAATCTTTTTCT | + |
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Preference number: 3 (lower is better) Translates to: KPSHHDDNRLNL*NYKPDPVKSFS Trigger: AGAAAAAGATTTAACTGGGTCTGGCTTATAGTTTCAGAGGTTCAGTCTATTATCATCATGGTGGGAAGGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| 3UTR TCA 72 bp | AAGATGGAATTCAGTATACTCAGTCAGTTCACTGACTaGGATGAATCTGGTAAATGTGACTTCTGTTTTGGA | + |
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Preference number: 3 (lower is better) Translates to: KMEFSILSQFTD*DESGKCDFCFG Trigger: TCCAAAACAGAAGTCACATTTACCAGATTCATCTCAGTCAGTGAACTGACTGAGTATACTGAATTCCATCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| 3UTR TCA 72 bp | CTTGAGACATGGTCTCTCAATAAACCAGAATGTAACTaGTTTGGTTACAGAAGGCTGACAGTGAGTTTATTT | + |
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Preference number: 3 (lower is better) Translates to: LETWSLNKPECN*FGYRRLTVSLF Trigger: AAATAAACTCACTGTCAGCCTTCTGTAACCAAATCAGTTACATTCTGGTTTATTGAGAGACCATGTCTCAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119960.2 |
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| 3UTR CCA 72 bp | ACAGACTCTATTTACTCTTTTAGGGTGGCAATAGGTTaGAAAGCCAAGCCTTTAAAAACTACATTGCATCAT | + |
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Preference number: 3 (lower is better) Translates to: TDSIYSFRVAIG*KAKPLKTTLHH Trigger: ATGATGCAATGTAGTTTTTAAAGGCTTGGCTTTCCAACCTATTGCCACCCTAAAAGAGTAAATAGAGTCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| CDS-3UTR GCA 90 bp | CACACTGCTTCCCCAGAGGACAGACAGAAACTCTCTTTTGCAGCTAGTTGCCATCAATGGCCTTGGGCTTaGCACTTCCTGTCGATAAAT | + |
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Preference number: 4 (lower is better) Translates to: HTASPEDRQKLSFAASCHQWPWA*HFLSIN Trigger: ATTTATCGACAGGAAGTGGCAAGCCCAAGGCCATTG...ATGGCAACTAGCTGCAAAAGAGAGTTTCTGTCTGTCCTCTGGGGAAGCAGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| CDS-3UTR GCA 90 bp | CTTGCTGATCACCAAGGGAAAGGCAATAGACAGAGAGGAATAGGCACAGTAACCTCTGGCTCCTCTCATTaGCACCAAAAAGCCAGAATT | + |
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Preference number: 4 (lower is better) Translates to: LADHQGKGNRQRGIGTVTSGSSH*HQKARI Trigger: AATTCTGGCTTTTTGGTGGCAATGAGAGGAGCCAGA...GGTTACTGTGCCTATTCCTCTCTGTCTATTGCCTTTCCCTTGGTGATCAGCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| CDS-3UTR GCA 90 bp | CCCTGCCTATCACTAGCAAGAGTAACAGTAGTCTACAAGTTTTGTGCTATGGCTCAATGGCCTTGGGCTTaGCACTTCCTGTCGATAAAT | + |
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Preference number: 4 (lower is better) Translates to: PCLSLARVTVVYKFCAMAQWPWA*HFLSIN Trigger: ATTTATCGACAGGAAGTGGCAAGCCCAAGGCCATTG...AGCCATAGCACAAAACTTGTAGACTACTGTTACTCTTGCTAGTGATAGGCAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| CDS-3UTR CCA 90 bp | TCTCTGCCCTCAGCTCCTACCTTGATATACCCATACTGTACTCTCTATAACTCACAGGACACAGGAACTTaGGAAGTTCTTTATGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SLPSAPTLIYPYCTLYNSQDTGT*EVLYAA Trigger: CGCTGCATAAAGAACTTCCCAAGTTCCTGTGTCCTG...TGAGTTATAGAGAGTACAGTATGGGTATATCAAGGTAGGAGCTGAGGGCAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| CDS-3UTR CCA 90 bp | GTATACTCAGTCAGTTCACTGACTGAGATGAATCTGGTAAATGTGACTTCTGTTGGCATGCACTTCCATTaGTTCCAGGCACAGGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: VYSVSSLTEMNLVNVTSVGMHFH*FQAQGM Trigger: CATGCCCTGTGCCTGGAACCAATGGAAGTGCATGCC...AACAGAAGTCACATTTACCAGATTCATCTCAGTCAGTGAACTGACTGAGTATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| CDS-3UTR TCA 90 bp | CTGACAAGGAGAATGTACTTGCTGATCACCAAGGGAAAGGCAATAGACAGAGAGAGTTTAAACTTGTCTTaGTCAATGGCCTTGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LTRRMYLLITKGKAIDRESLNLS*SMALGL Trigger: CAAGCCCAAGGCCATTGATCAAGACAAGTTTAAACT...CTCTCTGTCTATTGCCTTTCCCTTGGTGATCAGCAAGTACATTCTCCTTGTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| CDS-3UTR CCA 90 bp | TCTCTGCCCTCAGCTCCTACCTTGATATACCCATACTGTACTCTCTATAACTCACGCATCTCTCCAGTTTaGTCCATTAGAGTCCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLPSAPTLIYPYCTLYNSRISPV*SIRVQD Trigger: ATCTTGGACTCTAATGGACCAAACTGGAGAGATGCG...TGAGTTATAGAGAGTACAGTATGGGTATATCAAGGTAGGAGCTGAGGGCAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| CDS-3UTR TCA 90 bp | AATGTGGCAAGAAGAGATGAGACAATAAGTGTTCAAGCTTGGCTTCTCTGCCCTCATAATCTGGTCTTGTaGATGGACAACAAAGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: NVARRDETISVQAWLLCPHNLVL*MDNKGD Trigger: GTCTCCTTTGTTGTCCATTCACAAGACCAGATTATG...AGGGCAGAGAAGCCAAGCTTGAACACTTATTGTCTCATCTCTTCTTGCCACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| CDS-3UTR CCA 90 bp | AACATCCCCTGCCTATCACTAGCAAGAGTAACAGTAGTCTACAAGTTTTGTGCTCGCATCTCTCCAGTTTaGTCCATTAGAGTCCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NIPCLSLARVTVVYKFCARISPV*SIRVQD Trigger: ATCTTGGACTCTAATGGACCAAACTGGAGAGATGCG...AGCACAAAACTTGTAGACTACTGTTACTCTTGCTAGTGATAGGCAGGGGATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| 3UTR CAA 72 bp | TACAAGTTTTGTGCTATGGCTTCTAGGAGGAGCCATTaGGAGCCCTGTGCAACTGATAAAGGAGTATCATAT | + |
|
Preference number: 4 (lower is better) Translates to: YKFCAMASRRSH*EPCATDKGVSY Trigger: ATATGATACTCCTTTATCAGTTGCACAGGGCTCCAAATGGCTCCTCCTAGAAGCCATAGCACAAAACTTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| CDS-3UTR TCA 90 bp | GGCAAGGAAGGTACTGGAAAACCAAAATTGGACTGTTCTTTAGTGTCTTCCTCTTGGGACTGGGAACTTTaGATCTGCAAATGTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GKEGTGKPKLDCSLVSSSWDWEL*ICKCCF Trigger: GAAACAACATTTGCAGATTCAAAGTTCCCAGTCCCA...AGAGGAAGACACTAAAGAACAGTCCAATTTTGGTTTTCCAGTACCTTCCTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| CDS-3UTR TCA 90 bp | TTACTACTTCAGAGTTCACTACTGAAGGACACAGGCCTGATTCAAACTCAGGAACATAATCTGGTCTTGTaGATGGACAACAAAGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLQSSLLKDTGLIQTQEHNLVL*MDNKGD Trigger: GTCTCCTTTGTTGTCCATTCACAAGACCAGATTATG...TTCCTGAGTTTGAATCAGGCCTGTGTCCTTCAGTAGTGAACTCTGAAGTAGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| CDS-3UTR CCA 90 bp | GTATCATATAGATCCTGGGAATGTGAAGGAGCTAAATTACTACTTCAGAGTTCACAGGACACAGGAACTTaGGAAGTTCTTTATGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VSYRSWECEGAKLLLQSSQDTGT*EVLYAA Trigger: CGCTGCATAAAGAACTTCCCAAGTTCCTGTGTCCTG...TGAACTCTGAAGTAGTAATTTAGCTCCTTCACATTCCCAGGATCTATATGATAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| CDS-3UTR TCA 90 bp | AGAAATTGGGAAATTAATTCAGAATTATGCAGGCTGCCAGACAGAGCCAAACTTTGGGACTGGGAACTTTaGATCTGCAAATGTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RNWEINSELCRLPDRAKLWDWEL*ICKCCF Trigger: GAAACAACATTTGCAGATTCAAAGTTCCCAGTCCCA...AAGTTTGGCTCTGTCTGGCAGCCTGCATAATTCTGAATTAATTTCCCAATTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119960.2 |
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| CDS-3UTR GCA 90 bp | GTATCATATAGATCCTGGGAATGTGAAGGAGCTAAATTACTACTTCAGAGTTCATCTGGCTCCTCTCATTaGCACCAAAAAGCCAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: VSYRSWECEGAKLLLQSSSGSSH*HQKARI Trigger: AATTCTGGCTTTTTGGTGGCAATGAGAGGAGCCAGA...TGAACTCTGAAGTAGTAATTTAGCTCCTTCACATTCCCAGGATCTATATGATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| 3UTR CAA 72 bp | ATTATTGTCTCCACTTCCAAAGCTTGGTGCAAGCGGTaGCATAGTAGAGCAGTTACTTTAAAAATGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: IIVSTSKAWCKR*HSRAVTLKMNA Trigger: GGCATTCATTTTTAAAGTAACTGCTCTACTATGCAACCGCTTGCACCAAGCTTTGGAAGTGGAGACAATAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| 3UTR CAA 72 bp | GCATTCACACCAGTGTATACACAGACTCTTGCTTTCTaGGAGAAATTGGCTCCTTTATTTAATAAAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AFTPVYTQTLAF*EKLAPLFNKGG Trigger: ACCACCTTTATTAAATAAAGGAGCCAATTTCTCCAAGAAAGCAAGAGTCTGTGTATACACTGGTGTGAATGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| 3UTR CAA 72 bp | GAACAGCTGCATTCACACCAGTGTATACACAGACTCTaGCTTTCTTGGAGAAATTGGCTCCTTTATTTAATA | + |
|
Preference number: 4 (lower is better) Translates to: EQLHSHQCIHRL*LSWRNWLLYLI Trigger: TATTAAATAAAGGAGCCAATTTCTCCAAGAAAGCAAGAGTCTGTGTATACACTGGTGTGAATGCAGCTGTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| CDS-3UTR TCA 90 bp | GTATCATATAGATCCTGGGAATGTGAAGGAGCTAAATTACTACTTCAGAGTTCAAGACCTGGTAAGTATTaGTGTAGAAATCAAGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSYRSWECEGAKLLLQSSRPGKY*CRNQGH Trigger: ATGACCTTGATTTCTACATCAATACTTACCAGGTCT...TGAACTCTGAAGTAGTAATTTAGCTCCTTCACATTCCCAGGATCTATATGATAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| CDS-3UTR TCA 90 bp | TTTCAGCAACACACAAACAGTAAAGCCAATCCTGAAGAAAATTTATGGCTTTTGAGACCTGGTAAGTATTaGTGTAGAAATCAAGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FQQHTNSKANPEENLWLLRPGKY*CRNQGH Trigger: ATGACCTTGATTTCTACATCAATACTTACCAGGTCT...CAAAAGCCATAAATTTTCTTCAGGATTGGCTTTACTGTTTGTGTGTTGCTGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| CDS-3UTR CAA 90 bp | CACTCTTTGTCCACCACCAGTTACATCCCTGGGCCCACTCAACACCAGCTTCTGCCAGGACACAGGAACTaGGGAAGTTCTTTATGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HSLSTTSYIPGPTQHQLLPGHRN*GSSLCS Trigger: GCTGCATAAAGAACTTCCCAAGTTCCTGTGTCCTGG...CAGAAGCTGGTGTTGAGTGGGCCCAGGGATGTAACTGGTGGTGGACAAAGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| CDS-3UTR CAA 90 bp | CACTCTTTGTCCACCACCAGTTACATCCCTGGGCCCACTCAACACCAGCTTCTGGTGGGACTGGGAACTTaGAATCTGCAAATGTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: HSLSTTSYIPGPTQHQLLVGLGT*NLQMLF Trigger: AAACAACATTTGCAGATTCAAAGTTCCCAGTCCCAC...CAGAAGCTGGTGTTGAGTGGGCCCAGGGATGTAACTGGTGGTGGACAAAGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| CDS-3UTR CAA 90 bp | CTGCTTCCCCAGAGGACAGACAGAAACTCTCTTTTGCAGCTAGTTGCCATTTATCCAGGACACAGGAACTaGGGAAGTTCTTTATGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLPQRTDRNSLLQLVAIYPGHRN*GSSLCS Trigger: GCTGCATAAAGAACTTCCCAAGTTCCTGTGTCCTGG...ATAAATGGCAACTAGCTGCAAAAGAGAGTTTCTGTCTGTCCTCTGGGGAAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| CDS-3UTR CAA 90 bp | TTACTACTTCAGAGTTCACTACTGAAGGACACAGGCCTGATTCAAACTCAGGAAAGGCATGCACTTCCATaGGTTCCAGGCACAGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LLLQSSLLKDTGLIQTQERHALP*VPGTGH Trigger: ATGCCCTGTGCCTGGAACCAATGGAAGTGCATGCCT...TTCCTGAGTTTGAATCAGGCCTGTGTCCTTCAGTAGTGAACTCTGAAGTAGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| CDS-3UTR CAA 90 bp | CACACTGCTTCCCCAGAGGACAGACAGAAACTCTCTTTTGCAGCTAGTTGCCATTTAAAATCAGGCCACTaGTCAACTAGGGCTTTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: HTASPEDRQKLSFAASCHLKSGH*STRAFR Trigger: CCTAAAAGCCCTAGTTGACAAGTGGCCTGATTTTAA...ATGGCAACTAGCTGCAAAAGAGAGTTTCTGTCTGTCCTCTGGGGAAGCAGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| CDS-3UTR CAA 90 bp | ATCTCTCCAGCCCCCTCCACTTTATTTCTTGAGACATGGTCTCTCAATAAACCACTCTGGCTCCTCTCATaGCCACCAAAAAGCCAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: ISPAPSTLFLETWSLNKPLWLLS*PPKSQN Trigger: ATTCTGGCTTTTTGGTGGCAATGAGAGGAGCCAGAG...TGGTTTATTGAGAGACCATGTCTCAAGAAATAAAGTGGAGGGGGCTGGAGAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000119960.2 |
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| CDS TCA 90 bp | GTGAGAATAAACAGGATAACCACGCTTTGTCATAATCTGGTCTTGTaGATGGACAACAAAGGAGACAAGACCTTGGAGCCGGTACTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VRINRITTLCHNLVL*MDNKGDKTLEPVLR Trigger: CCTGAGTACCGGCTCCAAGGTCTTGTCTCCTTTGTTGTCCATTCACAAGACCAGATTATGACAAAGCGTGGTTATCCTGTTTATTCTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| CDS-3UTR CAA 90 bp | AACATCCCCTGCCTATCACTAGCAAGAGTAACAGTAGTCTACAAGTTTTGTGCTCTCTGGCTCCTCTCATaGCCACCAAAAAGCCAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: NIPCLSLARVTVVYKFCALWLLS*PPKSQN Trigger: ATTCTGGCTTTTTGGTGGCAATGAGAGGAGCCAGAG...AGCACAAAACTTGTAGACTACTGTTACTCTTGCTAGTGATAGGCAGGGGATGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| CDS-3UTR CAA 90 bp | GTATACTCAGTCAGTTCACTGACTGAGATGAATCTGGTAAATGTGACTTCTGTTAGGCATGCACTTCCATaGGTTCCAGGCACAGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: VYSVSSLTEMNLVNVTSVRHALP*VPGTGH Trigger: ATGCCCTGTGCCTGGAACCAATGGAAGTGCATGCCT...AACAGAAGTCACATTTACCAGATTCATCTCAGTCAGTGAACTGACTGAGTATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| CDS-3UTR CAA 90 bp | TGGGGATTTGATTCTAGGTCCTCTTGCTTTCAAAGCCACTTACTCACAGAGCCATTAAAATCAGGCCACTaGTCAACTAGGGCTTTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: WGFDSRSSCFQSHLLTEPLKSGH*STRAFR Trigger: CCTAAAAGCCCTAGTTGACAAGTGGCCTGATTTTAA...TGGCTCTGTGAGTAAGTGGCTTTGAAAGCAAGAGGACCTAGAATCAAATCCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119960.2 |
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| CDS-3UTR CAA 90 bp | ACCTTGATATACCCATACTGTACTCTCTATAACTCACCCCTTGCTCTCCTTAGCGTGGGACTGGGAACTTaGAATCTGCAAATGTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TLIYPYCTLYNSPLALLSVGLGT*NLQMLF Trigger: AAACAACATTTGCAGATTCAAAGTTCCCAGTCCCAC...GCTAAGGAGAGCAAGGGGTGAGTTATAGAGAGTACAGTATGGGTATATCAAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| CDS-3UTR CAA 90 bp | CAGGGCAAGGAAGGTACTGGAAAACCAAAATTGGACTGTTCTTTAGTGTCTTCCGAAGGGAACAGTTTCTaGATTGTCTCTGATGATACA | + |
|
Preference number: 5 (lower is better) Translates to: QGKEGTGKPKLDCSLVSSEGNSF*IVSDDT Trigger: TGTATCATCAGAGACAATCAAGAAACTGTTCCCTTC...GGAAGACACTAAAGAACAGTCCAATTTTGGTTTTCCAGTACCTTCCTTGCCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| CDS CCA 72 bp | TCAGGCATAGTGCCTCCCATTCGCATCTCTCCAGTTTaGTCCATTAGAGTCCAAGATGCAGGGGTTCCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SGIVPPIRISPV*SIRVQDAGVPS Trigger: TGAGGGAACCCCTGCATCTTGGACTCTAATGGACCAAACTGGAGAGATGCGAATGGGAGGCACTATGCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| CDS TCA 72 bp | AACAGGATAACCACGCTTTGTCATAATCTGGTCTTGTaGATGGACAACAAAGGAGACAAGACCTTGGAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: NRITTLCHNLVL*MDNKGDKTLEP Trigger: CGGCTCCAAGGTCTTGTCTCCTTTGTTGTCCATTCACAAGACCAGATTATGACAAAGCGTGGTTATCCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| CDS TCA 72 bp | TGGACAACATCCAAGGATGAAAGTTTAAACTTGTCTTaGTCAATGGCCTTGGGCTTGCCACTTCCTGTCGAT | + |
|
Preference number: 6 (lower is better) Translates to: WTTSKDESLNLS*SMALGLPLPVD Trigger: ATCGACAGGAAGTGGCAAGCCCAAGGCCATTGATCAAGACAAGTTTAAACTTTCATCCTTGGATGTTGTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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| CDS TCA 72 bp | TTTATTCACCAAGGCAGCATGGACAACATCCAAGGATaGAAGTTTAAACTTGTCTTGATCAATGGCCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: FIHQGSMDNIQG*KFKLVLINGLG Trigger: CCCAAGGCCATTGATCAAGACAAGTTTAAACTTTCATCCTTGGATGTTGTCCATGCTGCCTTGGTGAATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044976.12 ENSMUST00000119960.2 |
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