Pregenerated sensors for GLUL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026473Ensembl transcript IDs: ENSMUST00000086199.12, ENSMUST00000139476.8, ENSMUST00000140685.4
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACGCATCCCCTAAACCTAAGCCTGGGGACAGGTGGTGGCAAGCAGTaGCATCCCACTGGCTACCTGTCCAACATCTGCTCCTGCAGAGTG | + |
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Preference number: 1 (lower is better) Translates to: THPLNLSLGTGGGKQ*HPTGYLSNICSCRV Trigger: CACTCTGCAGGAGCAGATGTTGGACAGGTAGCCAGTGGGATGCCACTGCTTGCCACCACCTGTCCCCAGGCTTAGGTTTAGGGGATGCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| 3UTR GCA 90 bp | GGCAAGCAGTGGCATCCCACTGGCTACCTGTCCAACATCTGCTCCTaGAGAGTGGGCAGGGAAACCCTAAGCAGTAATGAAGCTGAGACC | + |
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Preference number: 1 (lower is better) Translates to: GKQWHPTGYLSNICS*RVGRETLSSNEAET Trigger: GGTCTCAGCTTCATTACTGCTTAGGGTTTCCCTGCCCACTCTGCAGGAGCAGATGTTGGACAGGTAGCCAGTGGGATGCCACTGCTTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| 3UTR CCA 90 bp | AGAAAGCTGGTTTCCCCTTTAGAAATAACAGCTCTCTACCAACAGTaGAAATGTCAATCTCAGCCGTTGGGCCTGCCCTTTCAACTATCC | + |
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Preference number: 1 (lower is better) Translates to: RKLVSPLEITALYQQ*KCQSQPLGLPFQLS Trigger: GGATAGTTGAAAGGGCAGGCCCAACGGCTGAGATTGACATTTCCACTGTTGGTAGAGAGCTGTTATTTCTAAAGGGGAAACCAGCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| 3UTR TCA 90 bp | CTCACTTCTAAGCCAAGCCCCTCATCACTCAAACTTGGCACCCAGTaGATAGGATGGTTCTCTCAATTAGAAAGACATACATCCACACAT | + |
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Preference number: 1 (lower is better) Translates to: LTSKPSPSSLKLGTQ*IGWFSQLERHTSTH Trigger: ATGTGTGGATGTATGTCTTTCTAATTGAGAGAACCATCCTATTCACTGGGTGCCAAGTTTGAGTGATGAGGGGCTTGGCTTAGAAGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| 3UTR CCA 90 bp | CACAGCGCAAGAAACCAACCTTCAACTCCTCACCTAACTTCCATTTaGAACAGAAAGCTGGTTTCCCCTTTAGAAATAACAGCTCTCTAC | + |
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Preference number: 1 (lower is better) Translates to: HSARNQPSTPHLTSI*NRKLVSPLEITALY Trigger: GTAGAGAGCTGTTATTTCTAAAGGGGAAACCAGCTTTCTGTTCCAAATGGAAGTTAGGTGAGGAGTTGAAGGTTGGTTTCTTGCGCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| 3UTR-3UTR GCA 90 bp | TGGAGTAAGTATACGCATCCCCTAAACCTAAGCCTGGGGACAGGTGGTGGCAAGTACCTGTCCAACATCTaGTCCTGCAGAGTGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: WSKYTHPLNLSLGTGGGKYLSNI*SCRVGR Trigger: CCTGCCCACTCTGCAGGAGCAGATGTTGGACAGGTA...CTTGCCACCACCTGTCCCCAGGCTTAGGTTTAGGGGATGCGTATACTTACTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| 3UTR-3UTR TCA 90 bp | CCTCAAGGGAGCCTCACTTCTAAGCCAAGCCCCTCATCACTCAAACTTGGCACCGGTATTCCATCCTTTTaGGTTACAGTGGGGACAACT | + |
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Preference number: 2 (lower is better) Translates to: PQGSLTSKPSPSSLKLGTGIPSF*VTVGTT Trigger: AGTTGTCCCCACTGTAACTCAAAAGGATGGAATACC...GGTGCCAAGTTTGAGTGATGAGGGGCTTGGCTTAGAAGTGAGGCTCCCTTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| 3UTR-3UTR CCA 90 bp | CTACCTCAAGGGAGCCTCACTTCTAAGCCAAGCCCCTCATCACTCAAACTTGGCGCTCTCTACCAACAGTaGAAATGTCAATCTCAGCCG | + |
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Preference number: 2 (lower is better) Translates to: LPQGSLTSKPSPSSLKLGALYQQ*KCQSQP Trigger: CGGCTGAGATTGACATTTCCACTGTTGGTAGAGAGC...GCCAAGTTTGAGTGATGAGGGGCTTGGCTTAGAAGTGAGGCTCCCTTGAGGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| 3UTR CAA 90 bp | CCCAGTAAACCCCCACCCACCCACCCATCAGTAACAGTGTTCAAGTaGACCAGCCAACTCATACTTCTAACTCGTGTGTGGAGTAAGTAT | + |
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Preference number: 2 (lower is better) Translates to: PSKPPPTHPSVTVFK*TSQLILLTRVWSKY Trigger: ATACTTACTCCACACACGAGTTAGAAGTATGAGTTGGCTGGTCAACTTGAACACTGTTACTGATGGGTGGGTGGGTGGGGGTTTACTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| 3UTR-3UTR GCA 90 bp | AATTCCCCTAAGAGCCAAGTGGAGGGAGACATTGAAACAAACAGGCAATTCTGTTCCAACATCTGCTCCTaGAGAGTGGGCAGGGAAACC | + |
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Preference number: 2 (lower is better) Translates to: NSPKSQVEGDIETNRQFCSNICS*RVGRET Trigger: GGTTTCCCTGCCCACTCTGCAGGAGCAGATGTTGGA...ACAGAATTGCCTGTTTGTTTCAATGTCTCCCTCCACTTGGCTCTTAGGGGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| 3UTR-3UTR CCA 90 bp | ACTCCTCACCTAACTTCCATTTGGAACAGAAAGCTGGTTTCCCCTTTAGAAATAGGGAAAGGGAAGAGCTaGGAGAGGGATCACTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: TPHLTSIWNRKLVSPLEIGKGKS*ERDHWK Trigger: CTTCCAGTGATCCCTCTCCCAGCTCTTCCCTTTCCC...TATTTCTAAAGGGGAAACCAGCTTTCTGTTCCAAATGGAAGTTAGGTGAGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| 3UTR-3UTR CCA 90 bp | CTACCTCAAGGGAGCCTCACTTCTAAGCCAAGCCCCTCATCACTCAAACTTGGCGGAATAAAAAGACCTTaGTATTCCATCCTTTTGAGT | + |
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Preference number: 2 (lower is better) Translates to: LPQGSLTSKPSPSSLKLGGIKRP*YSILLS Trigger: ACTCAAAAGGATGGAATACCAAGGTCTTTTTATTCC...GCCAAGTTTGAGTGATGAGGGGCTTGGCTTAGAAGTGAGGCTCCCTTGAGGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| 3UTR CAA 90 bp | GCACAGCGCAAGAAACCAACCTTCAACTCCTCACCTAACTTCCATTaGGAACAGAAAGCTGGTTTCCCCTTTAGAAATAACAGCTCTCTA | + |
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Preference number: 2 (lower is better) Translates to: AQRKKPTFNSSPNFH*EQKAGFPFRNNSSL Trigger: TAGAGAGCTGTTATTTCTAAAGGGGAAACCAGCTTTCTGTTCCAAATGGAAGTTAGGTGAGGAGTTGAAGGTTGGTTTCTTGCGCTGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| 3UTR-3UTR TCA 90 bp | CCAGTGAATAGGATGGTTCTCTCAATTAGAAAGACATACATCCACACATCCATAGCATACCCGATGAGATaGAGCAGTGGGTTACCCTTC | + |
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Preference number: 2 (lower is better) Translates to: PVNRMVLSIRKTYIHTSIAYPMR*SSGLPF Trigger: GAAGGGTAACCCACTGCTTCATCTCATCGGGTATGC...TATGGATGTGTGGATGTATGTCTTTCTAATTGAGAGAACCATCCTATTCACTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| 3UTR-3UTR TCA 90 bp | ACTCCTCACCTAACTTCCATTTGGAACAGAAAGCTGGTTTCCCCTTTAGAAATAGACATGCATACCCGATaGGATGAAGCAGTGGGTTAC | + |
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Preference number: 2 (lower is better) Translates to: TPHLTSIWNRKLVSPLEIDMHTR*DEAVGY Trigger: GTAACCCACTGCTTCATCTCATCGGGTATGCATGTC...TATTTCTAAAGGGGAAACCAGCTTTCTGTTCCAAATGGAAGTTAGGTGAGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| 3UTR-3UTR CCA 90 bp | CCAGTGAATAGGATGGTTCTCTCAATTAGAAAGACATACATCCACACATCCATAGTCAATCTCAGCCGTTaGGCCTGCCCTTTCAACTAT | + |
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Preference number: 2 (lower is better) Translates to: PVNRMVLSIRKTYIHTSIVNLSR*ACPFNY Trigger: ATAGTTGAAAGGGCAGGCCCAACGGCTGAGATTGAC...TATGGATGTGTGGATGTATGTCTTTCTAATTGAGAGAACCATCCTATTCACTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| 3UTR-3UTR TCA 90 bp | ACTCCTCACCTAACTTCCATTTGGAACAGAAAGCTGGTTTCCCCTTTAGAAATACTGACCCCTCTATTCTaGCCAACAAAAGCAAGATTA | + |
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Preference number: 2 (lower is better) Translates to: TPHLTSIWNRKLVSPLEILTPLF*PTKARL Trigger: TAATCTTGCTTTTGTTGGTCAGAATAGAGGGGTCAG...TATTTCTAAAGGGGAAACCAGCTTTCTGTTCCAAATGGAAGTTAGGTGAGGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| 3UTR CCA 72 bp | TACGCATCCCCTAAACCTAAGCCTGGGGACAGGTGGTaGCAAGCAGTGGCATCCCACTGGCTACCTGTCCAA | + |
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Preference number: 3 (lower is better) Translates to: YASPKPKPGDRW*QAVASHWLPVQ Trigger: TTGGACAGGTAGCCAGTGGGATGCCACTGCTTGCCACCACCTGTCCCCAGGCTTAGGTTTAGGGGATGCGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| 3UTR CCA 72 bp | GTATACGCATCCCCTAAACCTAAGCCTGGGGACAGGTaGTGGCAAGCAGTGGCATCCCACTGGCTACCTGTC | + |
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Preference number: 3 (lower is better) Translates to: VYASPKPKPGDR*WQAVASHWLPV Trigger: GACAGGTAGCCAGTGGGATGCCACTGCTTGCCACCACCTGTCCCCAGGCTTAGGTTTAGGGGATGCGTATAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| 3UTR GCA 72 bp | AAGCTGAGACCCCAAGATAACCAACTTTCCCGGTACTaGATCCTCACCCCTACCTCAAGGGAGCCTCACTTC | + |
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Preference number: 3 (lower is better) Translates to: KLRPQDNQLSRY*ILTPTSREPHF Trigger: GAAGTGAGGCTCCCTTGAGGTAGGGGTGAGGATGCAGTACCGGGAAAGTTGGTTATCTTGGGGTCTCAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| 3UTR GCA 72 bp | GTACACCCGCTTTGTGACAGCTATGCCTACCGGACATaGATACCCGATGAGATGAAGCAGTGGGTTACCCTT | + |
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Preference number: 3 (lower is better) Translates to: VHPLCDSYAYRT*IPDEMKQWVTL Trigger: AAGGGTAACCCACTGCTTCATCTCATCGGGTATGCATGTCCGGTAGGCATAGCTGTCACAAAGCGGGTGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| 3UTR-3UTR CAA 90 bp | GTACTGCATCCTCACCCCTACCTCAAGGGAGCCTCACTTCTAAGCCAAGCCCCTAAATACTACTCTGCTTaGTGTTATGAACGGAGGACC | + |
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Preference number: 3 (lower is better) Translates to: VLHPHPYLKGASLLSQAPKYYSA*CYERRT Trigger: GGTCCTCCGTTCATAACACAAAGCAGAGTAGTATTT...AGGGGCTTGGCTTAGAAGTGAGGCTCCCTTGAGGTAGGGGTGAGGATGCAGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| 3UTR CCA 72 bp | GTTTCCCCTTTAGAAATAACAGCTCTCTACCAACAGTaGAAATGTCAATCTCAGCCGTTGGGCCTGCCCTTT | + |
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Preference number: 3 (lower is better) Translates to: VSPLEITALYQQ*KCQSQPLGLPF Trigger: AAAGGGCAGGCCCAACGGCTGAGATTGACATTTCCACTGTTGGTAGAGAGCTGTTATTTCTAAAGGGGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| 3UTR-3UTR CAA 90 bp | AATTCCCCTAAGAGCCAAGTGGAGGGAGACATTGAAACAAACAGGCAATTCTGTTCACCTAACTTCCATTaGGAACAGAAAGCTGGTTTC | + |
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Preference number: 3 (lower is better) Translates to: NSPKSQVEGDIETNRQFCSPNFH*EQKAGF Trigger: GAAACCAGCTTTCTGTTCCAAATGGAAGTTAGGTGA...ACAGAATTGCCTGTTTGTTTCAATGTCTCCCTCCACTTGGCTCTTAGGGGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| CDS-3UTR CCA 90 bp | GACAGGTGGTGGCAAGCAGTGGCATCCCACTGGCTACCTGTCCAACATCTGCTCAGGGGTCTCGAAACATaGCAACAGGATGGAGGTACA | + |
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Preference number: 4 (lower is better) Translates to: DRWWQAVASHWLPVQHLLRGLET*QQDGGT Trigger: TGTACCTCCATCCTGTTGCCATGTTTCGAGACCCCT...GAGCAGATGTTGGACAGGTAGCCAGTGGGATGCCACTGCTTGCCACCACCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| CDS-3UTR GCA 90 bp | CTACCTCAAGGGAGCCTCACTTCTAAGCCAAGCCCCTCATCACTCAAACTTGGCGCTTGTTGGGGTCTTTaGGGAAGGGGTCTCGAAACA | + |
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Preference number: 4 (lower is better) Translates to: LPQGSLTSKPSPSSLKLGACWGL*GRGLET Trigger: TGTTTCGAGACCCCTTCCGCAAAGACCCCAACAAGC...GCCAAGTTTGAGTGATGAGGGGCTTGGCTTAGAAGTGAGGCTCCCTTGAGGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| CDS-3UTR GCA 90 bp | GACAGGTGGTGGCAAGCAGTGGCATCCCACTGGCTACCTGTCCAACATCTGCTCCCTCAAGTTGGTCTCTaGAGGTTTCCGGTTATACTT | + |
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Preference number: 4 (lower is better) Translates to: DRWWQAVASHWLPVQHLLPQVGL*RFPVIL Trigger: AAGTATAACCGGAAACCTGCAGAGACCAACTTGAGG...GAGCAGATGTTGGACAGGTAGCCAGTGGGATGCCACTGCTTGCCACCACCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| 3UTR CAA 72 bp | CCCCCACCCACCCACCCATCAGTAACAGTGTTCAAGTaGACCAGCCAACTCATACTTCTAACTCGTGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: PPPTHPSVTVFK*TSQLILLTRVW Trigger: CCACACACGAGTTAGAAGTATGAGTTGGCTGGTCAACTTGAACACTGTTACTGATGGGTGGGTGGGTGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| CDS-3UTR TCA 90 bp | GTACTGCATCCTCACCCCTACCTCAAGGGAGCCTCACTTCTAAGCCAAGCCCCTGTTTCCGGTTATACTTaGAAACTTCACATAGCACCA | + |
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Preference number: 4 (lower is better) Translates to: VLHPHPYLKGASLLSQAPVSGYT*KLHIAP Trigger: TGGTGCTATGTGAAGTTTTCAAGTATAACCGGAAAC...AGGGGCTTGGCTTAGAAGTGAGGCTCCCTTGAGGTAGGGGTGAGGATGCAGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| CDS-3UTR CCA 90 bp | TGGAGTAAGTATACGCATCCCCTAAACCTAAGCCTGGGGACAGGTGGTGGCAAGTGCTCAGTTTGTCAATaGCCTCCTCAATGCACTTCA | + |
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Preference number: 4 (lower is better) Translates to: WSKYTHPLNLSLGTGGGKCSVCQ*PPQCTS Trigger: TGAAGTGCATTGAGGAGGCCATTGACAAACTGAGCA...CTTGCCACCACCTGTCCCCAGGCTTAGGTTTAGGGGATGCGTATACTTACTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| CDS-3UTR TCA 90 bp | ACTCCTCACCTAACTTCCATTTGGAACAGAAAGCTGGTTTCCCCTTTAGAAATACGTCGCCTGTTTCGTTaGGGAGACACGTGCGGACGA | + |
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Preference number: 4 (lower is better) Translates to: TPHLTSIWNRKLVSPLEIRRLFR*GDTCGR Trigger: TCGTCCGCACGTGTCTCCTCAACGAAACAGGCGACG...TATTTCTAAAGGGGAAACCAGCTTTCTGTTCCAAATGGAAGTTAGGTGAGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| CDS-3UTR TCA 90 bp | CCTTTAGAAATAACAGCTCTCTACCAACAGTGGAAATGTCAATCTCAGCCGTTGCGGGCTATCCAAAGATaGTCTCCCATTCGGATCCCC | + |
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Preference number: 4 (lower is better) Translates to: PLEITALYQQWKCQSQPLRAIQR*SPIRIP Trigger: GGGGATCCGAATGGGAGATCATCTTTGGATAGCCCG...CAACGGCTGAGATTGACATTTCCACTGTTGGTAGAGAGCTGTTATTTCTAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| CDS-3UTR GCA 90 bp | AATTCCCCTAAGAGCCAAGTGGAGGGAGACATTGAAACAAACAGGCAATTCTGTGGTACTGGTGCCTCTTaGTCAGTTTGTCAATGGCCT | + |
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Preference number: 4 (lower is better) Translates to: NSPKSQVEGDIETNRQFCGTGAS*SVCQWP Trigger: AGGCCATTGACAAACTGAGCAAGAGGCACCAGTACC...ACAGAATTGCCTGTTTGTTTCAATGTCTCCCTCCACTTGGCTCTTAGGGGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| CDS-3UTR CCA 90 bp | CCAGTGAATAGGATGGTTCTCTCAATTAGAAAGACATACATCCACACATCCATATACTGGCACCGCGGTTaGCAACACCGGCAGAAAAGT | + |
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Preference number: 4 (lower is better) Translates to: PVNRMVLSIRKTYIHTSIYWHRG*QHRQKS Trigger: ACTTTTCTGCCGGTGTTGCCAACCGCGGTGCCAGTA...TATGGATGTGTGGATGTATGTCTTTCTAATTGAGAGAACCATCCTATTCACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| CDS-3UTR CCA 90 bp | CCAGTGAATAGGATGGTTCTCTCAATTAGAAAGACATACATCCACACATCCATAATCTGGAATTCCCACTaGGCAGGCATAACCTCCGCA | + |
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Preference number: 4 (lower is better) Translates to: PVNRMVLSIRKTYIHTSIIWNSH*AGITSA Trigger: TGCGGAGGTTATGCCTGCCCAGTGGGAATTCCAGAT...TATGGATGTGTGGATGTATGTCTTTCTAATTGAGAGAACCATCCTATTCACTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| CDS-3UTR GCA 90 bp | ACTCCTCACCTAACTTCCATTTGGAACAGAAAGCTGGTTTCCCCTTTAGAAATACGAATGTGGTACTGGTaGCTCTTGCTCAGTTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: TPHLTSIWNRKLVSPLEIRMWYW*LLLSLS Trigger: TGACAAACTGAGCAAGAGGCACCAGTACCACATTCG...TATTTCTAAAGGGGAAACCAGCTTTCTGTTCCAAATGGAAGTTAGGTGAGGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| CDS-3UTR TCA 90 bp | AAGAAACCAACCTTCAACTCCTCACCTAACTTCCATTTGGAACAGAAAGCTGGTACATGTACATTTGCTTaGTGCCTTTGTTCAAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: KKPTFNSSPNFHLEQKAGTCTFA*CLCSSG Trigger: CCCACTTGAACAAAGGCATCAAGCAAATGTACATGT...ACCAGCTTTCTGTTCCAAATGGAAGTTAGGTGAGGAGTTGAAGGTTGGTTTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| CDS-3UTR CAA 90 bp | GAAATAACAGCTCTCTACCAACAGTGGAAATGTCAATCTCAGCCGTTGGGCCTGAGCTTGTTGGGGTCTTaGCGGAAGGGGTCTCGAAAC | + |
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Preference number: 5 (lower is better) Translates to: EITALYQQWKCQSQPLGLSLLGS*RKGSRN Trigger: GTTTCGAGACCCCTTCCGCAAAGACCCCAACAAGCT...CAGGCCCAACGGCTGAGATTGACATTTCCACTGTTGGTAGAGAGCTGTTATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| CDS-3UTR CAA 90 bp | CTACCTCAAGGGAGCCTCACTTCTAAGCCAAGCCCCTCATCACTCAAACTTGGCGACATGTACATTTGCTaGATGCCTTTGTTCAAGTGG | + |
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Preference number: 5 (lower is better) Translates to: LPQGSLTSKPSPSSLKLGDMYIC*MPLFKW Trigger: CCACTTGAACAAAGGCATCAAGCAAATGTACATGTC...GCCAAGTTTGAGTGATGAGGGGCTTGGCTTAGAAGTGAGGCTCCCTTGAGGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| CDS-3UTR CAA 90 bp | CCTTTAGAAATAACAGCTCTCTACCAACAGTGGAAATGTCAATCTCAGCCGTTGTGGTACTGGTGCCTCTaGCTCAGTTTGTCAATGGCC | + |
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Preference number: 5 (lower is better) Translates to: PLEITALYQQWKCQSQPLWYWCL*LSLSMA Trigger: GGCCATTGACAAACTGAGCAAGAGGCACCAGTACCA...CAACGGCTGAGATTGACATTTCCACTGTTGGTAGAGAGCTGTTATTTCTAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086199.12 |
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| CDS CCA 72 bp | GCTTGTTGGGGTCTTTGCGGAAGGGGTCTCGAAACATaGCAACAGGATGGAGGTACATGTCGCTGTTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: ACWGLCGRGLET*QQDGGTCRCWS Trigger: GCTCCAACAGCGACATGTACCTCCATCCTGTTGCCATGTTTCGAGACCCCTTCCGCAAAGACCCCAACAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086199.12 ENSMUST00000139476.8 ENSMUST00000140685.4 |
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