Pregenerated sensors for GLUD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021794Ensembl transcript IDs: ENSMUST00000022322.17
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGACTGCATTACCAGTTCCCAAGAGTCCCTTGTCCCTTGCAGGTCTaGGGAGAGCGCCCCATAGTGCTACTTTATTTCTGCTGGACAATG | + |
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Preference number: 1 (lower is better) Translates to: GLHYQFPRVPCPLQV*GERPIVLLYFCWTM Trigger: CATTGTCCAGCAGAAATAAAGTAGCACTATGGGGCGCTCTCCTCAGACCTGCAAGGGACAAGGGACTCTTGGGAACTGGTAATGCAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| 3UTR TCA 90 bp | TACTTCTTATATGTGTCGGAGTTCCCAGACATGTCAAGAAGTGACTaGCTGCTCCTGACTCCTTCCCTGGCAACAGCACTGACTCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: YFLYVSEFPDMSRSD*LLLTPSLATALTLL Trigger: CAGCAGAGTCAGTGCTGTTGCCAGGGAAGGAGTCAGGAGCAGTCAGTCACTTCTTGACATGTCTGGGAACTCCGACACATATAAGAAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| 3UTR TCA 90 bp | CACCTACTTCTTATATGTGTCGGAGTTCCCAGACATGTCAAGAAGTaGCTGACTGCTCCTGACTCCTTCCCTGGCAACAGCACTGACTCT | + |
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Preference number: 1 (lower is better) Translates to: HLLLICVGVPRHVKK*LTAPDSFPGNSTDS Trigger: AGAGTCAGTGCTGTTGCCAGGGAAGGAGTCAGGAGCAGTCAGTCACTTCTTGACATGTCTGGGAACTCCGACACATATAAGAAGTAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| 3UTR-3UTR TCA 90 bp | GCAGAATGCAAAGCCTTGGAAGGGGACACACAGGTTGAGCCTGGCCACTGGCTCCCCTGGCAACAGCACTaGCTCTGCTGGGAAGGGCCC | + |
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Preference number: 2 (lower is better) Translates to: AECKALEGDTQVEPGHWLPWQQH*LCWEGP Trigger: GGGCCCTTCCCAGCAGAGTCAGTGCTGTTGCCAGGG...GAGCCAGTGGCCAGGCTCAACCTGTGTGTCCCCTTCCAAGGCTTTGCATTCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| 3UTR-3UTR TCA 90 bp | GCAGAATGCAAAGCCTTGGAAGGGGACACACAGGTTGAGCCTGGCCACTGGCTCAGACATGTCAAGAAGTaGCTGACTGCTCCTGACTCC | + |
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Preference number: 2 (lower is better) Translates to: AECKALEGDTQVEPGHWLRHVKK*LTAPDS Trigger: GGAGTCAGGAGCAGTCAGTCACTTCTTGACATGTCT...GAGCCAGTGGCCAGGCTCAACCTGTGTGTCCCCTTCCAAGGCTTTGCATTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| 3UTR-3UTR TCA 90 bp | GCCTCAGCTAATAACTTTGAAGGCAGCCTGGGTTATGTAAGACCTTGTTTCAAATGTCCCTTGCAGGTCTaGGGAGAGCGCCCCATAGTG | + |
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Preference number: 2 (lower is better) Translates to: ASANNFEGSLGYVRPCFKCPLQV*GERPIV Trigger: CACTATGGGGCGCTCTCCTCAGACCTGCAAGGGACA...TTTGAAACAAGGTCTTACATAACCCAGGCTGCCTTCAAAGTTATTAGCTGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| 3UTR-3UTR TCA 90 bp | GCTAATAACTTTGAAGGCAGCCTGGGTTATGTAAGACCTTGTTTCAAACAAAAAAGGGGACACACAGGTTaGGCCTGGCCACTGGCTCGT | + |
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Preference number: 2 (lower is better) Translates to: ANNFEGSLGYVRPCFKQKRGHTG*AWPLAR Trigger: ACGAGCCAGTGGCCAGGCTCAACCTGTGTGTCCCCT...TTTTTGTTTGAAACAAGGTCTTACATAACCCAGGCTGCCTTCAAAGTTATTAGC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| 3UTR-3UTR GCA 90 bp | AGGCGTTCAAGGGTAGCCTCAGCTAATAACTTTGAAGGCAGCCTGGGTTATGTACTGTACTCTCTGGACTaGATTACCAGTTCCCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: RRSRVASANNFEGSLGYVLYSLD*ITSSQE Trigger: CTCTTGGGAACTGGTAATGCAGTCCAGAGAGTACAG...TACATAACCCAGGCTGCCTTCAAAGTTATTAGCTGAGGCTACCCTTGAACGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| 3UTR-3UTR TCA 90 bp | AGGAGAGCGCCCCATAGTGCTACTTTATTTCTGCTGGACAATGATGCAGGGCCACCATCAGCTTGTACATaGTCCTCTAACTTAATCTCT | + |
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Preference number: 2 (lower is better) Translates to: RRAPHSATLFLLDNDAGPPSACT*SSNLIS Trigger: AGAGATTAAGTTAGAGGATCATGTACAAGCTGATGG...TGGCCCTGCATCATTGTCCAGCAGAAATAAAGTAGCACTATGGGGCGCTCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| 3UTR-3UTR TCA 90 bp | GCTAATAACTTTGAAGGCAGCCTGGGTTATGTAAGACCTTGTTTCAAACAAAAAGTGACTGACTGCTCCTaGCTCCTTCCCTGGCAACAG | + |
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Preference number: 2 (lower is better) Translates to: ANNFEGSLGYVRPCFKQKVTDCS*LLPWQQ Trigger: CTGTTGCCAGGGAAGGAGTCAGGAGCAGTCAGTCAC...TTTTTGTTTGAAACAAGGTCTTACATAACCCAGGCTGCCTTCAAAGTTATTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| 3UTR-3UTR GCA 90 bp | ATGGTAAAGTGGTTACTGTACTCTCTGGACTGCATTACCAGTTCCCAAGAGTCCGTGCTACTTTATTTCTaGTGGACAATGATGCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: MVKWLLYSLDCITSSQESVLLYF*WTMMQG Trigger: GCCCTGCATCATTGTCCAGCAGAAATAAAGTAGCAC...GGACTCTTGGGAACTGGTAATGCAGTCCAGAGAGTACAGTAACCACTTTACCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| 3UTR-3UTR TCA 90 bp | ATGGTAAAGTGGTTACTGTACTCTCTGGACTGCATTACCAGTTCCCAAGAGTCCTTTCTCTTAAGGGGCTaGTTCCAACTGACTTGTTCA | + |
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Preference number: 2 (lower is better) Translates to: MVKWLLYSLDCITSSQESFLLRG*FQLTCS Trigger: TGAACAAGTCAGTTGGAATCAGCCCCTTAAGAGAAA...GGACTCTTGGGAACTGGTAATGCAGTCCAGAGAGTACAGTAACCACTTTACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| 3UTR-3UTR TCA 90 bp | ACTTCCATGCTTTTATTTCTAAGATACCAGAAAAAGGCACACTGGAGCAAGAAGATGTCAAGAAGTGACTaGCTGCTCCTGACTCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: TSMLLFLRYQKKAHWSKKMSRSD*LLLTPS Trigger: GGAAGGAGTCAGGAGCAGTCAGTCACTTCTTGACAT...CTTCTTGCTCCAGTGTGCCTTTTTCTGGTATCTTAGAAATAAAAGCATGGAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| 3UTR-3UTR CCA 90 bp | ACTTCCATGCTTTTATTTCTAAGATACCAGAAAAAGGCACACTGGAGCAAGAAGCAGAATGCAAAGCCTTaGAAGGGGACACACAGGTTG | + |
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Preference number: 2 (lower is better) Translates to: TSMLLFLRYQKKAHWSKKQNAKP*KGTHRL Trigger: CAACCTGTGTGTCCCCTTCCAAGGCTTTGCATTCTG...CTTCTTGCTCCAGTGTGCCTTTTTCTGGTATCTTAGAAATAAAAGCATGGAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| 3UTR CAA 90 bp | AGCACAGGAGCAAGACTTTACCTAAAAGCAAACCACCTAACTGGCTaGGATACACGTGATTCCTACTTTTATACCATCAGCTTGTACATG | + |
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Preference number: 2 (lower is better) Translates to: STGARLYLKANHLTG*DTRDSYFYTISLYM Trigger: CATGTACAAGCTGATGGTATAAAAGTAGGAATCACGTGTATCCAAGCCAGTTAGGTGGTTTGCTTTTAGGTAAAGTCTTGCTCCTGTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| 3UTR-3UTR CCA 90 bp | GCTAATAACTTTGAAGGCAGCCTGGGTTATGTAAGACCTTGTTTCAAACAAAAACTACTTTATTTCTGCTaGACAATGATGCAGGGCCAA | + |
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Preference number: 2 (lower is better) Translates to: ANNFEGSLGYVRPCFKQKLLYFC*TMMQGQ Trigger: TTGGCCCTGCATCATTGTCCAGCAGAAATAAAGTAG...TTTTTGTTTGAAACAAGGTCTTACATAACCCAGGCTGCCTTCAAAGTTATTAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| 3UTR-3UTR TCA 90 bp | GCTAATAACTTTGAAGGCAGCCTGGGTTATGTAAGACCTTGTTTCAAACAAAAATGCAGAAATTATAGGTaGAGAGGTGGTAAAGAAGTC | + |
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Preference number: 2 (lower is better) Translates to: ANNFEGSLGYVRPCFKQKCRNYR*RGGKEV Trigger: GACTTCTTTACCACCTCTTCACCTATAATTTCTGCA...TTTTTGTTTGAAACAAGGTCTTACATAACCCAGGCTGCCTTCAAAGTTATTAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| 3UTR-3UTR CCA 90 bp | AGTAGTTTTCATGGTAAAGTGGTTACTGTACTCTCTGGACTGCATTACCAGTTCATTTCTATGGTTATATaGAAACTTGTGACAGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: SSFHGKVVTVLSGLHYQFISMVI*KLVTGL Trigger: CAGACCTGTCACAAGTTTCCATATAACCATAGAAAT...GAACTGGTAATGCAGTCCAGAGAGTACAGTAACCACTTTACCATGAAAACTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| 3UTR-3UTR CCA 90 bp | AGTAGTTTTCATGGTAAAGTGGTTACTGTACTCTCTGGACTGCATTACCAGTTCAAGGTTAGGCTTAAGTaGTTGAAGGCAATTTATTAC | + |
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Preference number: 2 (lower is better) Translates to: SSFHGKVVTVLSGLHYQFKVRLK*LKAIYY Trigger: GTAATAAATTGCCTTCAACCACTTAAGCCTAACCTT...GAACTGGTAATGCAGTCCAGAGAGTACAGTAACCACTTTACCATGAAAACTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| 3UTR TCA 72 bp | TATGTGTCGGAGTTCCCAGACATGTCAAGAAGTGACTaGCTGCTCCTGACTCCTTCCCTGGCAACAGCACTG | + |
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Preference number: 3 (lower is better) Translates to: YVSEFPDMSRSD*LLLTPSLATAL Trigger: CAGTGCTGTTGCCAGGGAAGGAGTCAGGAGCAGTCAGTCACTTCTTGACATGTCTGGGAACTCCGACACATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| 3UTR TCA 72 bp | TACCAGTTCCCAAGAGTCCCTTGTCCCTTGCAGGTCTaGGGAGAGCGCCCCATAGTGCTACTTTATTTCTGC | + |
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Preference number: 3 (lower is better) Translates to: YQFPRVPCPLQV*GERPIVLLYFC Trigger: GCAGAAATAAAGTAGCACTATGGGGCGCTCTCCTCAGACCTGCAAGGGACAAGGGACTCTTGGGAACTGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| 3UTR-3UTR CAA 90 bp | GCTAATAACTTTGAAGGCAGCCTGGGTTATGTAAGACCTTGTTTCAAACAAAAAAAGGGGACACACAGGTaGAGCCTGGCCACTGGCTCG | + |
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Preference number: 3 (lower is better) Translates to: ANNFEGSLGYVRPCFKQKKGTHR*SLATGS Trigger: CGAGCCAGTGGCCAGGCTCAACCTGTGTGTCCCCTT...TTTTTGTTTGAAACAAGGTCTTACATAACCCAGGCTGCCTTCAAAGTTATTAGC 48% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| 3UTR-3UTR CAA 90 bp | AGGAGAGCGCCCCATAGTGCTACTTTATTTCTGCTGGACAATGATGCAGGGCCAGTTAGGCTTAAGTGGTaGAAGGCAATTTATTACAGC | + |
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Preference number: 3 (lower is better) Translates to: RRAPHSATLFLLDNDAGPVRLKW*KAIYYS Trigger: GCTGTAATAAATTGCCTTCAACCACTTAAGCCTAAC...TGGCCCTGCATCATTGTCCAGCAGAAATAAAGTAGCACTATGGGGCGCTCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| 3UTR-3UTR CAA 90 bp | GCCTCAGCTAATAACTTTGAAGGCAGCCTGGGTTATGTAAGACCTTGTTTCAAAGCAGAATGCAAAGCCTaGGAAGGGGACACACAGGTT | + |
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Preference number: 3 (lower is better) Translates to: ASANNFEGSLGYVRPCFKAECKA*EGDTQV Trigger: AACCTGTGTGTCCCCTTCCAAGGCTTTGCATTCTGC...TTTGAAACAAGGTCTTACATAACCCAGGCTGCCTTCAAAGTTATTAGCTGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| 3UTR CCA 72 bp | ATGCTTTTATTTCTAAGATACCAGAAAAAGGCACACTaGAGCAAGAAGCAGGAGGATCAGGAGGCGTTCAAG | + |
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Preference number: 3 (lower is better) Translates to: MLLFLRYQKKAH*SKKQEDQEAFK Trigger: CTTGAACGCCTCCTGATCCTCCTGCTTCTTGCTCCAGTGTGCCTTTTTCTGGTATCTTAGAAATAAAAGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| 3UTR CCA 72 bp | TTCAAATGGGAAGAACAAGTAGTTTTCATGGTAAAGTaGTTACTGTACTCTCTGGACTGCATTACCAGTTCC | + |
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Preference number: 3 (lower is better) Translates to: FKWEEQVVFMVK*LLYSLDCITSS Trigger: GGAACTGGTAATGCAGTCCAGAGAGTACAGTAACCACTTTACCATGAAAACTACTTGTTCTTCCCATTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| 3UTR CAA 72 bp | GAGCAGAATGCAAAGCCTTGGAAGGGGACACACAGGTaGAGCCTGGCCACTGGCTCGTGCTCGAAGCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: EQNAKPWKGTHR*SLATGSCSKPA Trigger: GGCAGGCTTCGAGCACGAGCCAGTGGCCAGGCTCAACCTGTGTGTCCCCTTCCAAGGCTTTGCATTCTGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| 3UTR CAA 72 bp | ACTCTCTGGACTGCATTACCAGTTCCCAAGAGTCCCTaGTCCCTTGCAGGTCTGAGGAGAGCGCCCCATAGT | + |
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Preference number: 4 (lower is better) Translates to: TLWTALPVPKSP*SLAGLRRAPHS Trigger: ACTATGGGGCGCTCTCCTCAGACCTGCAAGGGACAAGGGACTCTTGGGAACTGGTAATGCAGTCCAGAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| CDS-3UTR CCA 90 bp | AGGAGAGCGCCCCATAGTGCTACTTTATTTCTGCTGGACAATGATGCAGGGCCATCAACTGCTTCTCGCTaGCGGCAGGAATCAGAATGT | + |
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Preference number: 4 (lower is better) Translates to: RRAPHSATLFLLDNDAGPSTASR*RQESEC Trigger: ACATTCTGATTCCTGCCGCCAGCGAGAAGCAGTTGA...TGGCCCTGCATCATTGTCCAGCAGAAATAAAGTAGCACTATGGGGCGCTCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| CDS-3UTR TCA 90 bp | AGGAGAGCGCCCCATAGTGCTACTTTATTTCTGCTGGACAATGATGCAGGGCCAGGGGAAGCCCAGAATTaGTCCATGTTGCAACTTGAA | + |
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Preference number: 4 (lower is better) Translates to: RRAPHSATLFLLDNDAGPGEAQN*SMLQLE Trigger: TTCAAGTTGCAACATGGATCAATTCTGGGCTTCCCC...TGGCCCTGCATCATTGTCCAGCAGAAATAAAGTAGCACTATGGGGCGCTCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| CDS-3UTR TCA 90 bp | ACTTCCATGCTTTTATTTCTAAGATACCAGAAAAAGGCACACTGGAGCAAGAAGCACAGGCATGCGCATTaGTATCATAGTGCCCTATGG | + |
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Preference number: 4 (lower is better) Translates to: TSMLLFLRYQKKAHWSKKHRHAH*YHSALW Trigger: CCATAGGGCACTATGATATCAATGCGCATGCCTGTG...CTTCTTGCTCCAGTGTGCCTTTTTCTGGTATCTTAGAAATAAAAGCATGGAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| CDS-3UTR TCA 90 bp | AGGCGTTCAAGGGTAGCCTCAGCTAATAACTTTGAAGGCAGCCTGGGTTATGTAACATTACCAAATCCCTaGACAACAAATGTCTTATCG | + |
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Preference number: 4 (lower is better) Translates to: RRSRVASANNFEGSLGYVTLPNP*TTNVLS Trigger: CGATAAGACATTTGTTGTTCAGGGATTTGGTAATGT...TACATAACCCAGGCTGCCTTCAAAGTTATTAGCTGAGGCTACCCTTGAACGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| CDS-3UTR GCA 90 bp | ATGGTAAAGTGGTTACTGTACTCTCTGGACTGCATTACCAGTTCCCAAGAGTCCAGAATTGATCCATGTTaGAACTTGAAGTCTTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: MVKWLLYSLDCITSSQESRIDPC*NLKSSS Trigger: ACTGGAAGACTTCAAGTTGCAACATGGATCAATTCT...GGACTCTTGGGAACTGGTAATGCAGTCCAGAGAGTACAGTAACCACTTTACCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| CDS-3UTR TCA 90 bp | AGTAGTTTTCATGGTAAAGTGGTTACTGTACTCTCTGGACTGCATTACCAGTTCATCCATGTTGCAACTTaGAGTCTTCCAGTTCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: SSFHGKVVTVLSGLHYQFIHVAT*SLPVLL Trigger: CAAAAGAACTGGAAGACTTCAAGTTGCAACATGGAT...GAACTGGTAATGCAGTCCAGAGAGTACAGTAACCACTTTACCATGAAAACTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| CDS-3UTR CAA 90 bp | GCAGAATGCAAAGCCTTGGAAGGGGACACACAGGTTGAGCCTGGCCACTGGCTCTGGCAGATCTCTCCATaGTGTAGGCCAAGCCAGAGT | + |
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Preference number: 5 (lower is better) Translates to: AECKALEGDTQVEPGHWLWQISP*CRPSQS Trigger: ACTCTGGCTTGGCCTACACAATGGAGAGATCTGCCA...GAGCCAGTGGCCAGGCTCAACCTGTGTGTCCCCTTCCAAGGCTTTGCATTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| CDS-3UTR CAA 90 bp | ACTTCCATGCTTTTATTTCTAAGATACCAGAAAAAGGCACACTGGAGCAAGAAGCCTTCAGCAATGATCTaGGCTTTGACTCTGGGTGCA | + |
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Preference number: 5 (lower is better) Translates to: TSMLLFLRYQKKAHWSKKPSAMI*ALTLGA Trigger: TGCACCCAGAGTCAAAGCCAAGATCATTGCTGAAGG...CTTCTTGCTCCAGTGTGCCTTTTTCTGGTATCTTAGAAATAAAAGCATGGAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| CDS-3UTR CAA 90 bp | CTTCAAATGGGAAGAACAAGTAGTTTTCATGGTAAAGTGGTTACTGTACTCTCTCCAATAAAACCCTTCTaGGCCAGCTCCATAGTGAAC | + |
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Preference number: 5 (lower is better) Translates to: LQMGRTSSFHGKVVTVLSPIKPF*ASSIVN Trigger: GTTCACTATGGAGCTGGCCAAGAAGGGTTTTATTGG...AGAGAGTACAGTAACCACTTTACCATGAAAACTACTTGTTCTTCCCATTTGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| CDS-3UTR CAA 90 bp | AGTAGTTTTCATGGTAAAGTGGTTACTGTACTCTCTGGACTGCATTACCAGTTCGATCCATGTTGCAACTaGAAGTCTTCCAGTTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: SSFHGKVVTVLSGLHYQFDPCCN*KSSSSF Trigger: AAAAGAACTGGAAGACTTCAAGTTGCAACATGGATC...GAACTGGTAATGCAGTCCAGAGAGTACAGTAACCACTTTACCATGAAAACTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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| CDS CAA 72 bp | GCAGGCACATCAATGCCAGGACCAATAAAACCCTTCTaGGCCAGCTCCATAGTGAACCTCCGTGTAATTTTT | + |
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Preference number: 6 (lower is better) Translates to: AGTSMPGPIKPF*ASSIVNLRVIF Trigger: AAAAATTACACGGAGGTTCACTATGGAGCTGGCCAAGAAGGGTTTTATTGGTCCTGGCATTGATGTGCCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022322.17 |
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