Pregenerated sensors for GLTPD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046811Ensembl transcript IDs: ENSMUST00000057685.3, ENSMUST00000179000.2
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCTGAAGATGAGAGGATCTCACACATCACTGAGACTGCCCTGCTaGGGGTGGGCCTTAACTGTGGTGACTTCACTAAAGAGGACCGCT | + |
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Preference number: 1 (lower is better) Translates to: RLKMRGSHTSLRLPC*GWALTVVTSLKRTA Trigger: AGCGGTCCTCTTTAGTGAAGTCACCACAGTTAAGGCCCACCCCCAGCAGGGCAGTCTCAGTGATGTGTGAGATCCTCTCATCTTCAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057685.3 |
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| 3UTR-3UTR GCA 90 bp | AGAGGATCTCACACATCACTGAGACTGCCCTGCTGGGGGTGGGCCTTAACTGTGATCCCTTCCCAGAAATaGCTTTCTGGTCGGTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: RGSHTSLRLPCWGWALTVIPSQK*LSGRSL Trigger: AAGAGACCGACCAGAAAGGCATTTCTGGGAAGGGAT...CACAGTTAAGGCCCACCCCCAGCAGGGCAGTCTCAGTGATGTGTGAGATCCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057685.3 |
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| 3UTR CCA 72 bp | GGATCTCACACATCACTGAGACTGCCCTGCTGGGGGTaGGCCTTAACTGTGGTGACTTCACTAAAGAGGACC | + |
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Preference number: 3 (lower is better) Translates to: GSHTSLRLPCWG*ALTVVTSLKRT Trigger: GGTCCTCTTTAGTGAAGTCACCACAGTTAAGGCCCACCCCCAGCAGGGCAGTCTCAGTGATGTGTGAGATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057685.3 |
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| 3UTR GCA 72 bp | AAGATGAGAGGATCTCACACATCACTGAGACTGCCCTaGTGGGGGTGGGCCTTAACTGTGGTGACTTCACTA | + |
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Preference number: 3 (lower is better) Translates to: KMRGSHTSLRLP*WGWALTVVTSL Trigger: TAGTGAAGTCACCACAGTTAAGGCCCACCCCCAGCAGGGCAGTCTCAGTGATGTGTGAGATCCTCTCATCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057685.3 |
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| 3UTR CCA 72 bp | ATGAGAGGATCTCACACATCACTGAGACTGCCCTGCTaGGGGTGGGCCTTAACTGTGGTGACTTCACTAAAG | + |
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Preference number: 3 (lower is better) Translates to: MRGSHTSLRLPC*GWALTVVTSLK Trigger: CTTTAGTGAAGTCACCACAGTTAAGGCCCACCCCCAGCAGGGCAGTCTCAGTGATGTGTGAGATCCTCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057685.3 |
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| CDS-3UTR CCA 90 bp | ATCTCACACATCACTGAGACTGCCCTGCTGGGGGTGGGCCTTAACTGTGGTGACCCGGGACACGCCAGCTaGAGCAGGCGACCGCGACTC | + |
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Preference number: 4 (lower is better) Translates to: ISHITETALLGVGLNCGDPGHAS*SRRPRL Trigger: GAGTCGCGGTCGCCTGCTCCAGCTGGCGTGTCCCGG...GTCACCACAGTTAAGGCCCACCCCCAGCAGGGCAGTCTCAGTGATGTGTGAGAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057685.3 |
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| CDS-3UTR CCA 90 bp | TCACACATCACTGAGACTGCCCTGCTGGGGGTGGGCCTTAACTGTGGTGACTTCCTGTGGAGGCAGAGCTaGGACCAGCGCAGCGCGCGA | + |
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Preference number: 4 (lower is better) Translates to: SHITETALLGVGLNCGDFLWRQS*DQRSAR Trigger: TCGCGCGCTGCGCTGGTCCCAGCTCTGCCTCCACAG...GAAGTCACCACAGTTAAGGCCCACCCCCAGCAGGGCAGTCTCAGTGATGTGTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057685.3 |
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| CDS-3UTR CCA 90 bp | AGAGGATCTCACACATCACTGAGACTGCCCTGCTGGGGGTGGGCCTTAACTGTGCCTGTCGCCACCCTGTaGAGGCAGAGCTGGGACCAG | + |
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Preference number: 4 (lower is better) Translates to: RGSHTSLRLPCWGWALTVPVATL*RQSWDQ Trigger: CTGGTCCCAGCTCTGCCTCCACAGGGTGGCGACAGG...CACAGTTAAGGCCCACCCCCAGCAGGGCAGTCTCAGTGATGTGTGAGATCCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057685.3 |
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| CDS-3UTR TCA 90 bp | GGATCTCACACATCACTGAGACTGCCCTGCTGGGGGTGGGCCTTAACTGTGGTGGACTGCTGGGTTCTCTaGGCTGGTAAGGGGAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: GSHTSLRLPCWGWALTVVDCWVL*AGKGKG Trigger: GCCCTTCCCCTTACCAGCTCAGAGAACCCAGCAGTC...CACCACAGTTAAGGCCCACCCCCAGCAGGGCAGTCTCAGTGATGTGTGAGATCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057685.3 |
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| CDS-3UTR GCA 90 bp | AGAGGATCTCACACATCACTGAGACTGCCCTGCTGGGGGTGGGCCTTAACTGTGATAAGCCATGGATGGTaGGGGGCCAGGGCGGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: RGSHTSLRLPCWGWALTVISHGW*GARAVL Trigger: CAGCACCGCCCTGGCCCCGCACCATCCATGGCTTAT...CACAGTTAAGGCCCACCCCCAGCAGGGCAGTCTCAGTGATGTGTGAGATCCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000057685.3 |
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| CDS-3UTR CCA 90 bp | CTGAGACTGCCCTGCTGGGGGTGGGCCTTAACTGTGGTGACTTCACTAAAGAGGGCCGCTGGGCCAGTCTaGGAAGGTAGCGGTCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: LRLPCWGWALTVVTSLKRAAGPV*EGSGLS Trigger: AGAGAGACCGCTACCTTCCCAGACTGGCCCAGCGGC...CCTCTTTAGTGAAGTCACCACAGTTAAGGCCCACCCCCAGCAGGGCAGTCTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057685.3 |
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| CDS-3UTR CCA 90 bp | GGTAACCCTGAGTATGTACATCCCTTCCCAGAAATGCCTTTCTGGTCGGTCTCTAGCTGGAGCAGGCCGTaGCCGGCCAGCAGGCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: GNPEYVHPFPEMPFWSVSSWSRP*PASRPW Trigger: CCAGGGCCTGCTGGCCGGCCACGGCCTGCTCCAGCT...AGAGACCGACCAGAAAGGCATTTCTGGGAAGGGATGTACATACTCAGGGTTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057685.3 |
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| CDS-3UTR TCA 90 bp | CTGAGTATGTACATCCCTTCCCAGAAATGCCTTTCTGGTCGGTCTCTTGATGCCGCCCGAGGACCCGGCTaGATGCCCAGGTTCGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: LSMYIPSQKCLSGRSLDAARGPG*MPRFGS Trigger: GGAACCGAACCTGGGCATTCAGCCGGGTCCTCGGGC...GGCATCAAGAGACCGACCAGAAAGGCATTTCTGGGAAGGGATGTACATACTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057685.3 |
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| CDS-3UTR CCA 90 bp | CTGAGACTGCCCTGCTGGGGGTGGGCCTTAACTGTGGTGACTTCACTAAAGAGGCAGGGAGCCGAGGACTaGAGAAGGAGAAGGGAGTTT | + |
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Preference number: 4 (lower is better) Translates to: LRLPCWGWALTVVTSLKRQGAED*RRRREF Trigger: AAACTCCCTTCTCCTTCTCCAGTCCTCGGCTCCCTG...CCTCTTTAGTGAAGTCACCACAGTTAAGGCCCACCCCCAGCAGGGCAGTCTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057685.3 |
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| CDS-3UTR GCA 90 bp | ATGTACATCCCTTCCCAGAAATGCCTTTCTGGTCGGTCTCTTGATGCCGCGGCCCAAAGGCGAAGACAGTaGCAAGGGGAGTTAGGAACC | + |
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Preference number: 4 (lower is better) Translates to: MYIPSQKCLSGRSLDAAAQRRRQ*QGELGT Trigger: GGTTCCTAACTCCCCTTGGCACTGTCTTCGCCTTTG...GGCCGCGGCATCAAGAGACCGACCAGAAAGGCATTTCTGGGAAGGGATGTACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057685.3 |
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| CDS-3UTR CCA 90 bp | CTGAGTATGTACATCCCTTCCCAGAAATGCCTTTCTGGTCGGTCTCTTGATGCCCCGGCCAGCAGGCCCTaGGTACGATTGTACACATCC | + |
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Preference number: 4 (lower is better) Translates to: LSMYIPSQKCLSGRSLDAPASRP*VRLYTS Trigger: GGATGTGTACAATCGTACCCAGGGCCTGCTGGCCGG...GGCATCAAGAGACCGACCAGAAAGGCATTTCTGGGAAGGGATGTACATACTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057685.3 |
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| CDS CCA 90 bp | AGAGCAACCCGCGCGTCCGCCTCTCCTGTTCCGGGACACGCCAGCTaGAGCAGGCGACCGCGACTCGGGAGGGCCAAGATCGCCAGGCGA | + |
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Preference number: 5 (lower is better) Translates to: RATRASASPVPGHAS*SRRPRLGRAKIARR Trigger: TCGCCTGGCGATCTTGGCCCTCCCGAGTCGCGGTCGCCTGCTCCAGCTGGCGTGTCCCGGAACAGGAGAGGCGGACGCGCGGGTTGCTCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057685.3 ENSMUST00000179000.2 |
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| CDS CCA 90 bp | GGCCAGGGCGGTGCTGTAGGCTTCCCCGCACTGCGTGCCCGCATCTaGACCTCCAAGCGTCCCTGTCGCCACCCTGTGGAGGCAGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: GQGGAVGFPALRARI*TSKRPCRHPVEAEL Trigger: CAGCTCTGCCTCCACAGGGTGGCGACAGGGACGCTTGGAGGTCCAGATGCGGGCACGCAGTGCGGGGAAGCCTACAGCACCGCCCTGGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057685.3 ENSMUST00000179000.2 |
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| CDS GCA 90 bp | GTCGCCACCCTGTGGAGGCAGAGCTGGGACCAGCGCAGCGCGCGATaGAACAAAAGTAGCGTTCGAGAGCCCGAGGACCCGGCTGAATGC | + |
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Preference number: 5 (lower is better) Translates to: VATLWRQSWDQRSAR*NKSSVREPEDPAEC Trigger: GCATTCAGCCGGGTCCTCGGGCTCTCGAACGCTACTTTTGTTGCATCGCGCGCTGCGCTGGTCCCAGCTCTGCCTCCACAGGGTGGCGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057685.3 ENSMUST00000179000.2 |
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| CDS CCA 90 bp | GCAGGACTGCACCCCTGCCGGGAAACTAAGCAGGGAGCCGAGGACTaGAGAAGGAGAAGGGAGTTTGAGTCCCCGCAGGCCGGACTGCTG | + |
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Preference number: 5 (lower is better) Translates to: AGLHPCRETKQGAED*RRRREFESPQAGLL Trigger: CAGCAGTCCGGCCTGCGGGGACTCAAACTCCCTTCTCCTTCTCCAGTCCTCGGCTCCCTGCTTAGTTTCCCGGCAGGGGTGCAGTCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057685.3 |
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| CDS CCA 90 bp | TCTGGACCTCCAAGCGTCCCTGTCGCCACCCTGTGGAGGCAGAGCTaGGACCAGCGCAGCGCGCGATGCAACAAAAGTAGCGTTCGAGAG | + |
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Preference number: 5 (lower is better) Translates to: SGPPSVPVATLWRQS*DQRSARCNKSSVRE Trigger: CTCTCGAACGCTACTTTTGTTGCATCGCGCGCTGCGCTGGTCCCAGCTCTGCCTCCACAGGGTGGCGACAGGGACGCTTGGAGGTCCAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057685.3 ENSMUST00000179000.2 |
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| CDS TCA 90 bp | CTCATACAGGCCAGGAAGGGGCTCACCATGCGACCCAGCGCCCCATaGGGCCCTAGACAGGGAAGCTCTTCCTTCTCTGGGACCACTAGG | + |
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Preference number: 5 (lower is better) Translates to: LIQARKGLTMRPSAP*GPRQGSSSFSGTTR Trigger: CCTAGTGGTCCCAGAGAAGGAAGAGCTTCCCTGTCTAGGGCCTCATGGGGCGCTGGGTCGCATGGTGAGCCCCTTCCTGGCCTGTATGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057685.3 |
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| CDS TCA 90 bp | AAGCATTGGGGCCGTGCACACGAGCCTCGAGGTCGGTCACCTTGTTaGAGGCCTCGCTGGTGGCAAAGGCGAAGACAGTGCCAAGGGGAG | + |
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Preference number: 5 (lower is better) Translates to: KHWGRAHEPRGRSPC*RPRWWQRRRQCQGE Trigger: CTCCCCTTGGCACTGTCTTCGCCTTTGCCACCAGCGAGGCCTTCAACAAGGTGACCGACCTCGAGGCTCGTGTGCACGGCCCCAATGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057685.3 ENSMUST00000179000.2 |
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| CDS CCA 90 bp | GCCCTAGACAGGGAAGCTCTTCCTTCTCTGGGACCACTAGGGGTCTaGCCGCTGGGCCAGTCTGGGAAGGTAGCGGTCTCTCTGGATTGC | + |
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Preference number: 5 (lower is better) Translates to: ALDREALPSLGPLGV*PLGQSGKVAVSLDC Trigger: GCAATCCAGAGAGACCGCTACCTTCCCAGACTGGCCCAGCGGCCAGACCCCTAGTGGTCCCAGAGAAGGAAGAGCTTCCCTGTCTAGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057685.3 |
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| CDS TCA 90 bp | TGCTCCCCGCTCCCATGTGATCATAGTCATCAGCGATGTGTAGTGTaGAGCATTGGGGCCGTGCACACGAGCCTCGAGGTCGGTCACCTT | + |
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Preference number: 5 (lower is better) Translates to: CSPLPCDHSHQRCVV*SIGAVHTSLEVGHL Trigger: AAGGTGACCGACCTCGAGGCTCGTGTGCACGGCCCCAATGCTTCACACTACACATCGCTGATGACTATGATCACATGGGAGCGGGGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057685.3 ENSMUST00000179000.2 |
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| CDS-3UTR CAA 90 bp | GTATGTACATCCCTTCCCAGAAATGCCTTTCTGGTCGGTCTCTTGATGCCGCGGAGGTCGGTCACCTTGTaGAAGGCCTCGCTGGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: VCTSLPRNAFLVGLLMPRRSVTL*KASLVA Trigger: TGCCACCAGCGAGGCCTTCAACAAGGTGACCGACCT...CCGCGGCATCAAGAGACCGACCAGAAAGGCATTTCTGGGAAGGGATGTACATAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057685.3 |
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| CDS-3UTR CAA 90 bp | AAGATGAGAGGATCTCACACATCACTGAGACTGCCCTGCTGGGGGTGGGCCTTAAGGCCCTGGGTACGATaGTACACATCCTCCAGGACG | + |
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Preference number: 5 (lower is better) Translates to: KMRGSHTSLRLPCWGWALRPWVR*YTSSRT Trigger: CGTCCTGGAGGATGTGTACAATCGTACCCAGGGCCT...TAAGGCCCACCCCCAGCAGGGCAGTCTCAGTGATGTGTGAGATCCTCTCATCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057685.3 |
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| CDS-3UTR CAA 90 bp | CTGAGTATGTACATCCCTTCCCAGAAATGCCTTTCTGGTCGGTCTCTTGATGCCAGCGGTCTCTCTGGATaGCAGGACTGCACCCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: LSMYIPSQKCLSGRSLDASGLSG*QDCTPA Trigger: GGCAGGGGTGCAGTCCTGCAATCCAGAGAGACCGCT...GGCATCAAGAGACCGACCAGAAAGGCATTTCTGGGAAGGGATGTACATACTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057685.3 |
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| CDS TCA 90 bp | AGGGGAGTTAGGAACCTAAGTAGTTCTCTCCATCCTGCCAGATACTaGGACAACGCCACATCCCCTTCAGGGCTCATACAGGCCAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: RGVRNLSSSLHPARY*DNATSPSGLIQARK Trigger: CTTCCTGGCCTGTATGAGCCCTGAAGGGGATGTGGCGTTGTCTCAGTATCTGGCAGGATGGAGAGAACTACTTAGGTTCCTAACTCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057685.3 ENSMUST00000179000.2 |
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| CDS CCA 72 bp | CGCGCGTCCGCCTCTCCTGTTCCGGGACACGCCAGCTaGAGCAGGCGACCGCGACTCGGGAGGGCCAAGATC | + |
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Preference number: 6 (lower is better) Translates to: RASASPVPGHAS*SRRPRLGRAKI Trigger: GATCTTGGCCCTCCCGAGTCGCGGTCGCCTGCTCCAGCTGGCGTGTCCCGGAACAGGAGAGGCGGACGCGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057685.3 ENSMUST00000179000.2 |
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| CDS CCA 72 bp | GCCAGCTGGAGCAGGCCGTGGCCGGCCAGCAGGCCCTaGGTACGATTGTACACATCCTCCAGGACGCCGGCG | + |
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Preference number: 6 (lower is better) Translates to: ASWSRPWPASRP*VRLYTSSRTPA Trigger: CGCCGGCGTCCTGGAGGATGTGTACAATCGTACCCAGGGCCTGCTGGCCGGCCACGGCCTGCTCCAGCTGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057685.3 ENSMUST00000179000.2 |
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| CDS GCA 72 bp | CTGTGGAGGCAGAGCTGGGACCAGCGCAGCGCGCGATaGAACAAAAGTAGCGTTCGAGAGCCCGAGGACCCG | + |
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Preference number: 6 (lower is better) Translates to: LWRQSWDQRSAR*NKSSVREPEDP Trigger: CGGGTCCTCGGGCTCTCGAACGCTACTTTTGTTGCATCGCGCGCTGCGCTGGTCCCAGCTCTGCCTCCACAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057685.3 ENSMUST00000179000.2 |
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| CDS CCA 72 bp | CCAAGCGTCCCTGTCGCCACCCTGTGGAGGCAGAGCTaGGACCAGCGCAGCGCGCGATGCAACAAAAGTAGC | + |
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Preference number: 6 (lower is better) Translates to: PSVPVATLWRQS*DQRSARCNKSS Trigger: GCTACTTTTGTTGCATCGCGCGCTGCGCTGGTCCCAGCTCTGCCTCCACAGGGTGGCGACAGGGACGCTTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057685.3 ENSMUST00000179000.2 |
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| CDS TCA 72 bp | GGCCGTGCACACGAGCCTCGAGGTCGGTCACCTTGTTaGAGGCCTCGCTGGTGGCAAAGGCGAAGACAGTGC | + |
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Preference number: 6 (lower is better) Translates to: GRAHEPRGRSPC*RPRWWQRRRQC Trigger: GCACTGTCTTCGCCTTTGCCACCAGCGAGGCCTTCAACAAGGTGACCGACCTCGAGGCTCGTGTGCACGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057685.3 ENSMUST00000179000.2 |
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| CDS GCA 72 bp | CTTCAGGGCTCATACAGGCCAGGAAGGGGCTCACCATaGGACCCAGCGCCCCATGAGGCCCTAGACAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: LQGSYRPGRGSP*DPAPHEALDRE Trigger: TTCCCTGTCTAGGGCCTCATGGGGCGCTGGGTCGCATGGTGAGCCCCTTCCTGGCCTGTATGAGCCCTGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057685.3 |
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| CDS CCA 72 bp | CACCCCTGCCGGGAAACTAAGCAGGGAGCCGAGGACTaGAGAAGGAGAAGGGAGTTTGAGTCCCCGCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: HPCRETKQGAED*RRRREFESPQA Trigger: GGCCTGCGGGGACTCAAACTCCCTTCTCCTTCTCCAGTCCTCGGCTCCCTGCTTAGTTTCCCGGCAGGGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057685.3 |
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| CDS CCA 72 bp | TCTGGGACCACTAGGGGTCTGGCCGCTGGGCCAGTCTaGGAAGGTAGCGGTCTCTCTGGATTGCAGGACTGC | + |
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Preference number: 6 (lower is better) Translates to: SGTTRGLAAGPV*EGSGLSGLQDC Trigger: GCAGTCCTGCAATCCAGAGAGACCGCTACCTTCCCAGACTGGCCCAGCGGCCAGACCCCTAGTGGTCCCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057685.3 |
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| CDS CAA 72 bp | GGGCCGTGCACACGAGCCTCGAGGTCGGTCACCTTGTaGAAGGCCTCGCTGGTGGCAAAGGCGAAGACAGTG | + |
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Preference number: 6 (lower is better) Translates to: GPCTRASRSVTL*KASLVAKAKTV Trigger: CACTGTCTTCGCCTTTGCCACCAGCGAGGCCTTCAACAAGGTGACCGACCTCGAGGCTCGTGTGCACGGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057685.3 ENSMUST00000179000.2 |
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| CDS CAA 90 bp | GAAGCATTGGGGCCGTGCACACGAGCCTCGAGGTCGGTCACCTTGTaGAAGGCCTCGCTGGTGGCAAAGGCGAAGACAGTGCCAAGGGGA | + |
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Preference number: 6 (lower is better) Translates to: EALGPCTRASRSVTL*KASLVAKAKTVPRG Trigger: TCCCCTTGGCACTGTCTTCGCCTTTGCCACCAGCGAGGCCTTCAACAAGGTGACCGACCTCGAGGCTCGTGTGCACGGCCCCAATGCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057685.3 ENSMUST00000179000.2 |
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| CDS CCA 72 bp | AGGGAAGCTCTTCCTTCTCTGGGACCACTAGGGGTCTaGCCGCTGGGCCAGTCTGGGAAGGTAGCGGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: REALPSLGPLGV*PLGQSGKVAVS Trigger: AGAGACCGCTACCTTCCCAGACTGGCCCAGCGGCCAGACCCCTAGTGGTCCCAGAGAAGGAAGAGCTTCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057685.3 |
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| CDS CAA 72 bp | TTGGGGCCGTGCACACGAGCCTCGAGGTCGGTCACCTaGTTGAAGGCCTCGCTGGTGGCAAAGGCGAAGACA | + |
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Preference number: 6 (lower is better) Translates to: LGPCTRASRSVT*LKASLVAKAKT Trigger: TGTCTTCGCCTTTGCCACCAGCGAGGCCTTCAACAAGGTGACCGACCTCGAGGCTCGTGTGCACGGCCCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057685.3 ENSMUST00000179000.2 |
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| CDS CAA 90 bp | TGTGAAGCATTGGGGCCGTGCACACGAGCCTCGAGGTCGGTCACCTaGTTGAAGGCCTCGCTGGTGGCAAAGGCGAAGACAGTGCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: CEALGPCTRASRSVT*LKASLVAKAKTVPR Trigger: CCTTGGCACTGTCTTCGCCTTTGCCACCAGCGAGGCCTTCAACAAGGTGACCGACCTCGAGGCTCGTGTGCACGGCCCCAATGCTTCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057685.3 ENSMUST00000179000.2 |
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| CDS TCA 72 bp | CTCCCATGTGATCATAGTCATCAGCGATGTGTAGTGTaGAGCATTGGGGCCGTGCACACGAGCCTCGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: LPCDHSHQRCVV*SIGAVHTSLEV Trigger: GACCTCGAGGCTCGTGTGCACGGCCCCAATGCTTCACACTACACATCGCTGATGACTATGATCACATGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057685.3 ENSMUST00000179000.2 |
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| CDS TCA 72 bp | AGGAACCTAAGTAGTTCTCTCCATCCTGCCAGATACTaGGACAACGCCACATCCCCTTCAGGGCTCATACAG | + |
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Preference number: 6 (lower is better) Translates to: RNLSSSLHPARY*DNATSPSGLIQ Trigger: CTGTATGAGCCCTGAAGGGGATGTGGCGTTGTCTCAGTATCTGGCAGGATGGAGAGAACTACTTAGGTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057685.3 ENSMUST00000179000.2 |
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