Pregenerated sensors for GLT8D2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020251Ensembl transcript IDs: ENSMUST00000020485.10, ENSMUST00000020485.11, ENSMUST00000065815.14, ENSMUST00000125505.2, ENSMUST00000125505.3, ENSMUST00000150269.8, ENSMUST00000155529.2
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTCAGAGCCCCTGGAACTGCCATGTGGGTTCTGGGAATCAAAGCTaGGTCCTCTGGAAGAACAGCCAACACTCTCTCCAGCCAGGGAGA | + |
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Preference number: 1 (lower is better) Translates to: CQSPWNCHVGSGNQS*VLWKNSQHSLQPGR Trigger: TCTCCCTGGCTGGAGAGAGTGTTGGCTGTTCTTCCAGAGGACCCAGCTTTGATTCCCAGAACCCACATGGCAGTTCCAGGGGCTCTGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020485.10 |
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| 3UTR CCA 90 bp | GTGTACCCAGTGCCTGTGAAGGCCAGAAGAGAATGTCAGAGCCCCTaGAACTGCCATGTGGGTTCTGGGAATCAAAGCTGGGTCCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: VYPVPVKARRECQSP*NCHVGSGNQSWVLW Trigger: CCAGAGGACCCAGCTTTGATTCCCAGAACCCACATGGCAGTTCCAGGGGCTCTGACATTCTCTTCTGGCCTTCACAGGCACTGGGTACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020485.10 |
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| 3UTR GCA 90 bp | CCAGTGCCTGTGAAGGCCAGAAGAGAATGTCAGAGCCCCTGGAACTaGCATGTGGGTTCTGGGAATCAAAGCTGGGTCCTCTGGAAGAAC | + |
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Preference number: 1 (lower is better) Translates to: PVPVKARRECQSPWN*HVGSGNQSWVLWKN Trigger: GTTCTTCCAGAGGACCCAGCTTTGATTCCCAGAACCCACATGGCAGTTCCAGGGGCTCTGACATTCTCTTCTGGCCTTCACAGGCACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020485.10 |
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| 3UTR CCA 90 bp | CCCTGGAACTGCCATGTGGGTTCTGGGAATCAAAGCTGGGTCCTCTaGAAGAACAGCCAACACTCTCTCCAGCCAGGGAGATCCCATCTT | + |
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Preference number: 1 (lower is better) Translates to: PWNCHVGSGNQSWVL*KNSQHSLQPGRSHL Trigger: AAGATGGGATCTCCCTGGCTGGAGAGAGTGTTGGCTGTTCTTCCAGAGGACCCAGCTTTGATTCCCAGAACCCACATGGCAGTTCCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020485.10 |
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| 3UTR GCA 90 bp | CTGTATAGACCAGGCTGGCCTCGAACTCACAGATTAAACTCTTTCTaGCTCCTGAGTGCTGAGATTAAAGGTATGTGCCGCCACCACCCG | + |
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Preference number: 1 (lower is better) Translates to: LYRPGWPRTHRLNSF*LLSAEIKGMCRHHP Trigger: CGGGTGGTGGCGGCACATACCTTTAATCTCAGCACTCAGGAGGCAGAAAGAGTTTAATCTGTGAGTTCGAGGCCAGCCTGGTCTATACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020485.10 |
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| 3UTR CCA 90 bp | GCTCATGGCAATCGTTTGAACTTCAAGAAGTTAAGTCTATCTGTGTaGGCCTTGGTTCAACTTGTACACAGTAGTATTTGTCTCTTACAC | + |
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Preference number: 1 (lower is better) Translates to: AHGNRLNFKKLSLSV*ALVQLVHSSICLLH Trigger: GTGTAAGAGACAAATACTACTGTGTACAAGTTGAACCAAGGCCCACACAGATAGACTTAACTTCTTGAAGTTCAAACGATTGCCATGAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020485.10 |
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| 3UTR-3UTR TCA 90 bp | AGGGTAAGTCACAGTCGTCTGAAAAGGCCGCTGCATGGCCCAGAGCCAAGGTGGCAGCTCAGGCCTCGATaGGTCTGGTCTAATCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: RVSHSRLKRPLHGPEPRWQLRPR*VWSNLP Trigger: GGGAAGATTAGACCAGACTCATCGAGGCCTGAGCTG...CCACCTTGGCTCTGGGCCATGCAGCGGCCTTTTCAGACGACTGTGACTTACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125505.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTCCGGTAGTCCAGATAGCCCATGTATGTGTTCTGTAGTCCCACAAGTCGGTGGCCCAGAGCCAAGGTaGTGTCATACAGCTCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: SSGSPDSPCMCSVVPQVGGPEPR*CHTAPG Trigger: TCCAGGAGCTGTATGACACCACCTTGGCTCTGGGCC...ACCGACTTGTGGGACTACAGAACACATACATGGGCTATCTGGACTACCGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125505.2 |
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| 3UTR-3UTR CCA 90 bp | GATGCCAAGGTCCTTTATGGTCTTCTTCCGGTAGTCCAGATAGCCCATGTATGTACAAAGTTCAGGGGCTaGAGCAGCTCAGGCCTCGAT | + |
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Preference number: 2 (lower is better) Translates to: DAKVLYGLLPVVQIAHVCTKFRG*SSSGLD Trigger: ATCGAGGCCTGAGCTGCTCCAGCCCCTGAACTTTGT...ACATACATGGGCTATCTGGACTACCGGAAGAAGACCATAAAGGACCTTGGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125505.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAGGCCTTCAGTTCCAGTACTTAGGAGGCAAAGACATGAGGATCTTTGTGAGACTCTTTCTGCCTCCTaGGTGCTGAGATTAAAGGTA | + |
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Preference number: 2 (lower is better) Translates to: PRPSVPVLRRQRHEDLCETLSAS*VLRLKV Trigger: TACCTTTAATCTCAGCACTCAGGAGGCAGAAAGAGT...CTCACAAAGATCCTCATGTCTTTGCCTCCTAAGTACTGGAACTGAAGGCCTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020485.10 |
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| 3UTR-3UTR TCA 90 bp | GATGCCAAGGTCCTTTATGGTCTTCTTCCGGTAGTCCAGATAGCCCATGTATGTCATCATCCAAATAGATaGCTTTCTCATGCTGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: DAKVLYGLLPVVQIAHVCHHPNR*LSHAGG Trigger: TCCACCAGCATGAGAAAGTCATCTATTTGGATGATG...ACATACATGGGCTATCTGGACTACCGGAAGAAGACCATAAAGGACCTTGGCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125505.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGAGTTTGAAGTTGTGAGTTCCAATTTATCCAGGGATATAGAGAAAGACCCTCAGAGCCCCTGGAACTaGCATGTGGGTTCTGGGAAT | + |
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Preference number: 2 (lower is better) Translates to: CEFEVVSSNLSRDIEKDPQSPWN*HVGSGN Trigger: ATTCCCAGAACCCACATGGCAGTTCCAGGGGCTCTG...AGGGTCTTTCTCTATATCCCTGGATAAATTGGAACTCACAACTTCAAACTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020485.10 |
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| 3UTR-3UTR CCA 90 bp | AAAGACAAGACTAGCAACCTGTTTTTAAGAAAGAAAACCCTGCAGCCAGATGTGCTGCCATGTGGGTTCTaGGAATCAAAGCTGGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: KDKTSNLFLRKKTLQPDVLPCGF*ESKLGP Trigger: AGGACCCAGCTTTGATTCCCAGAACCCACATGGCAG...CACATCTGGCTGCAGGGTTTTCTTTCTTAAAAACAGGTTGCTAGTCTTGTCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020485.10 |
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| 3UTR-3UTR CCA 90 bp | AAAGACAAGACTAGCAACCTGTTTTTAAGAAAGAAAACCCTGCAGCCAGATGTGCAAAGCTGGGTCCTCTaGAAGAACAGCCAACACTCT | + |
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Preference number: 2 (lower is better) Translates to: KDKTSNLFLRKKTLQPDVQSWVL*KNSQHS Trigger: AGAGTGTTGGCTGTTCTTCCAGAGGACCCAGCTTTG...CACATCTGGCTGCAGGGTTTTCTTTCTTAAAAACAGGTTGCTAGTCTTGTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020485.10 |
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| 3UTR-3UTR CCA 90 bp | TGTGAGTTTGAAGTTGTGAGTTCCAATTTATCCAGGGATATAGAGAAAGACCCTGAATGTCAGAGCCCCTaGAACTGCCATGTGGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: CEFEVVSSNLSRDIEKDPECQSP*NCHVGS Trigger: AGAACCCACATGGCAGTTCCAGGGGCTCTGACATTC...AGGGTCTTTCTCTATATCCCTGGATAAATTGGAACTCACAACTTCAAACTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020485.10 |
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| 3UTR CAA 90 bp | GGATCATGGCCTTGTAACAGTGTCAGTTACATGGCACTCTCTGCATaGTCAGAAACAATAGAATCTGGCTCTTTACATTTCTTGCCTGAT | + |
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Preference number: 2 (lower is better) Translates to: GSWPCNSVSYMALSA*SETIESGSLHFLPD Trigger: ATCAGGCAAGAAATGTAAAGAGCCAGATTCTATTGTTTCTGACAATGCAGAGAGTGCCATGTAACTGACACTGTTACAAGGCCATGATCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150269.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTGTGAGTTTGAAGTTGTGAGTTCCAATTTATCCAGGGATATAGAGAAAGACTCTGGGAATCAAAGCTaGGTCCTCTGGAAGAACAGC | + |
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Preference number: 2 (lower is better) Translates to: LCEFEVVSSNLSRDIEKDSGNQS*VLWKNS Trigger: GCTGTTCTTCCAGAGGACCCAGCTTTGATTCCCAGA...GTCTTTCTCTATATCCCTGGATAAATTGGAACTCACAACTTCAAACTCACAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020485.10 |
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| 3UTR-3UTR CCA 90 bp | TGTGAGTTTGAAGTTGTGAGTTCCAATTTATCCAGGGATATAGAGAAAGACCCTCTGTATAGACCAGGCTaGCCTCGAACTCACAGATTA | + |
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Preference number: 2 (lower is better) Translates to: CEFEVVSSNLSRDIEKDPLYRPG*PRTHRL Trigger: TAATCTGTGAGTTCGAGGCCAGCCTGGTCTATACAG...AGGGTCTTTCTCTATATCCCTGGATAAATTGGAACTCACAACTTCAAACTCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020485.10 |
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| 3UTR CAA 90 bp | CTCTCTGCATTGTCAGAAACAATAGAATCTGGCTCTTTACATTTCTaGCCTGATTCCAAACCTTATAGGGAAAACGGGATTCTTTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: LSALSETIESGSLHF*PDSKPYRENGILFL Trigger: GAGGAAAAGAATCCCGTTTTCCCTATAAGGTTTGGAATCAGGCAAGAAATGTAAAGAGCCAGATTCTATTGTTTCTGACAATGCAGAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150269.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTGTGAGTTTGAAGTTGTGAGTTCCAATTTATCCAGGGATATAGAGAAAGACTTAAGTCTATCTGTGTaGGCCTTGGTTCAACTTGTA | + |
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Preference number: 2 (lower is better) Translates to: LCEFEVVSSNLSRDIEKDLSLSV*ALVQLV Trigger: TACAAGTTGAACCAAGGCCCACACAGATAGACTTAA...GTCTTTCTCTATATCCCTGGATAAATTGGAACTCACAACTTCAAACTCACAAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020485.10 |
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| 3UTR CCA 72 bp | GAGGGTAAGTCACAGTCGTCTGAAAAGGCCGCTGCATaGCCCAGAGCCAAGGTGGTGTCATACAGCTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: EGKSQSSEKAAA*PRAKVVSYSSW Trigger: CCAGGAGCTGTATGACACCACCTTGGCTCTGGGCCATGCAGCGGCCTTTTCAGACGACTGTGACTTACCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125505.2 |
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| 3UTR GCA 72 bp | GTGAAGGCCAGAAGAGAATGTCAGAGCCCCTGGAACTaGCATGTGGGTTCTGGGAATCAAAGCTGGGTCCTC | + |
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Preference number: 3 (lower is better) Translates to: VKARRECQSPWN*HVGSGNQSWVL Trigger: GAGGACCCAGCTTTGATTCCCAGAACCCACATGGCAGTTCCAGGGGCTCTGACATTCTCTTCTGGCCTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020485.10 |
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| 3UTR CCA 72 bp | TGCCATGTGGGTTCTGGGAATCAAAGCTGGGTCCTCTaGAAGAACAGCCAACACTCTCTCCAGCCAGGGAGA | + |
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Preference number: 3 (lower is better) Translates to: CHVGSGNQSWVL*KNSQHSLQPGR Trigger: TCTCCCTGGCTGGAGAGAGTGTTGGCTGTTCTTCCAGAGGACCCAGCTTTGATTCCCAGAACCCACATGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020485.10 |
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| 3UTR CCA 72 bp | CCCTGGAACTGCCATGTGGGTTCTGGGAATCAAAGCTaGGTCCTCTGGAAGAACAGCCAACACTCTCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: PWNCHVGSGNQS*VLWKNSQHSLQ Trigger: CTGGAGAGAGTGTTGGCTGTTCTTCCAGAGGACCCAGCTTTGATTCCCAGAACCCACATGGCAGTTCCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020485.10 |
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| 3UTR CCA 72 bp | CCAGAAGAGAATGTCAGAGCCCCTGGAACTGCCATGTaGGTTCTGGGAATCAAAGCTGGGTCCTCTGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: PEENVRAPGTAM*VLGIKAGSSGR Trigger: TCTTCCAGAGGACCCAGCTTTGATTCCCAGAACCCACATGGCAGTTCCAGGGGCTCTGACATTCTCTTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020485.10 |
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| 3UTR TCA 72 bp | CTTCCATATGTGCATCACATGTGTACCCAGTGCCTGTaGAGGCCAGAAGAGAATGTCAGAGCCCCTGGAACT | + |
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Preference number: 3 (lower is better) Translates to: LPYVHHMCTQCL*RPEENVRAPGT Trigger: AGTTCCAGGGGCTCTGACATTCTCTTCTGGCCTTCACAGGCACTGGGTACACATGTGATGCACATATGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020485.10 |
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| 3UTR TCA 72 bp | TATGTGTTCTGTAGTCCCACAAGTCGGTGGATGTCTTaGGCAGAGGGTAAGTCACAGTCGTCTGAAAAGGCC | + |
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Preference number: 3 (lower is better) Translates to: YVFCSPTSRWMS*AEGKSQSSEKA Trigger: GGCCTTTTCAGACGACTGTGACTTACCCTCTGCTCAAGACATCCACCGACTTGTGGGACTACAGAACACATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125505.2 |
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| 3UTR CCA 72 bp | GCATGGCCCAGAGCCAAGGTGGTGTCATACAGCTCCTaGATATCGCCTTGTACGATAACATCATCATCCAAA | + |
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Preference number: 3 (lower is better) Translates to: AWPRAKVVSYSS*ISPCTITSSSK Trigger: TTTGGATGATGATGTTATCGTACAAGGCGATATCCAGGAGCTGTATGACACCACCTTGGCTCTGGGCCATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125505.2 |
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| 3UTR-3UTR CAA 90 bp | TGGCCCAGAGCCAAGGTGGTGTCATACAGCTCCTGGATATCGCCTTGTACGATATTGAGGACTGTAGGATaGAACTCCACAATTTTGAAG | + |
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Preference number: 3 (lower is better) Translates to: WPRAKVVSYSSWISPCTILRTVG*NSTILK Trigger: CTTCAAAATTGTGGAGTTCAATCCTACAGTCCTCAA...TATCGTACAAGGCGATATCCAGGAGCTGTATGACACCACCTTGGCTCTGGGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125505.2 |
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| 3UTR-3UTR CAA 90 bp | GGTGTCATACAGCTCCTGGATATCGCCTTGTACGATAACATCATCATCCAAATAGGTCTAATCTTCCCCTaGAGGACTGTAGGATTGAAC | + |
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Preference number: 3 (lower is better) Translates to: GVIQLLDIALYDNIIIQIGLIFP*RTVGLN Trigger: GTTCAATCCTACAGTCCTCAAGGGGAAGATTAGACC...TATTTGGATGATGATGTTATCGTACAAGGCGATATCCAGGAGCTGTATGACACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125505.2 |
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| 3UTR GCA 72 bp | TTTGAAAACATGTATGGATATTTTGCCTTCCATATGTaGATCACATGTGTACCCAGTGCCTGTGAAGGCCAG | + |
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Preference number: 3 (lower is better) Translates to: FENMYGYFAFHM*ITCVPSACEGQ Trigger: CTGGCCTTCACAGGCACTGGGTACACATGTGATGCACATATGGAAGGCAAAATATCCATACATGTTTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020485.10 |
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| 3UTR-3UTR CAA 90 bp | GCACTCTCTGCATTGTCAGAAACAATAGAATCTGGCTCTTTACATTTCTTGCCTTTTTCCTCAGAAAGGTaGTGCCCTTTCTGCATATCA | + |
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Preference number: 3 (lower is better) Translates to: ALSALSETIESGSLHFLPFSSER*CPFCIS Trigger: TGATATGCAGAAAGGGCACAACCTTTCTGAGGAAAA...AGGCAAGAAATGTAAAGAGCCAGATTCTATTGTTTCTGACAATGCAGAGAGTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150269.8 |
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| 3UTR CCA 72 bp | AATCGTTTGAACTTCAAGAAGTTAAGTCTATCTGTGTaGGCCTTGGTTCAACTTGTACACAGTAGTATTTGT | + |
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Preference number: 3 (lower is better) Translates to: NRLNFKKLSLSV*ALVQLVHSSIC Trigger: ACAAATACTACTGTGTACAAGTTGAACCAAGGCCCACACAGATAGACTTAACTTCTTGAAGTTCAAACGATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020485.10 |
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| CDS-3UTR TCA 90 bp | CCTGATTCCAAACCTTATAGGGAAAACGGGATTCTTTTCCTCAGAAAGGTTGTGTGTGCCACAGTGGGTTaGTGGTGGAATACTTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: PDSKPYRENGILFLRKVVCATVG*WWNTSR Trigger: ACGGGAAGTATTCCACCATCAACCCACTGTGGCACA...CACAACCTTTCTGAGGAAAAGAATCCCGTTTTCCCTATAAGGTTTGGAATCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150269.8 |
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| 3UTR CAA 72 bp | AGCTCAGGCCTCGATGAGTCTGGTCTAATCTTCCCCTaGAGGACTGTAGGATTGAACTCCACAATTTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: SSGLDESGLIFP*RTVGLNSTILK Trigger: CTTCAAAATTGTGGAGTTCAATCCTACAGTCCTCAAGGGGAAGATTAGACCAGACTCATCGAGGCCTGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125505.2 |
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| CDS-3UTR TCA 90 bp | TTCCTCGGAGTGTTCTACAGTACTTCTAGAAGGTCATGCAGATATAATTTATATGTGGAATACTTCCCGTaGAACACAATCAGCATGGGA | + |
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Preference number: 4 (lower is better) Translates to: FLGVFYSTSRRSCRYNLYVEYFP*NTISMG Trigger: TCCCATGCTGATTGTGTTTCACGGGAAGTATTCCAC...ATATAAATTATATCTGCATGACCTTCTAGAAGTACTGTAGAACACTCCGAGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150269.8 |
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| CDS-3UTR CCA 90 bp | TTCCTCGGAGTGTTCTACAGTACTTCTAGAAGGTCATGCAGATATAATTTATATCCGTATGTGCCACAGTaGGTTGATGGTGGAATACTT | + |
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Preference number: 4 (lower is better) Translates to: FLGVFYSTSRRSCRYNLYPYVPQ*VDGGIL Trigger: AAGTATTCCACCATCAACCCACTGTGGCACATACGG...ATATAAATTATATCTGCATGACCTTCTAGAAGTACTGTAGAACACTCCGAGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150269.8 |
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| 3UTR CAA 72 bp | CCTTGTAACAGTGTCAGTTACATGGCACTCTCTGCATaGTCAGAAACAATAGAATCTGGCTCTTTACATTTC | + |
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Preference number: 4 (lower is better) Translates to: PCNSVSYMALSA*SETIESGSLHF Trigger: GAAATGTAAAGAGCCAGATTCTATTGTTTCTGACAATGCAGAGAGTGCCATGTAACTGACACTGTTACAAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150269.8 |
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| 3UTR CAA 72 bp | TGTCTCTTACACCATAGGTCATATATATCAGAAGAGTaGCTCTTAAAGAACAGTGTTAGAAGATACAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: CLLHHRSYISEE*LLKNSVRRYRG Trigger: CCCTCTGTATCTTCTAACACTGTTCTTTAAGAGCAACTCTTCTGATATATATGACCTATGGTGTAAGAGACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020485.10 |
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| CDS CCA 90 bp | TGCCATGGCTGCACCCATTCTCCCTGCTGCTGCACAGATCACCACTaGAATCTCTTCTTCCATGTCCTCGGGGGACTCGGAATCAACGTC | + |
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Preference number: 5 (lower is better) Translates to: CHGCTHSPCCCTDHH*NLFFHVLGGLGINV Trigger: GACGTTGATTCCGAGTCCCCCGAGGACATGGAAGAAGAGATTCCAGTGGTGATCTGTGCAGCAGCAGGGAGAATGGGTGCAGCCATGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020485.11 ENSMUST00000065815.14 |
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| CDS TCA 90 bp | AGGTGCCGTATGTGCCACAGTGGGTTGATGGTGGAATACTTCCCGTaGAACACAATCAGCATGGGAGAAGTGGCCACTCCTCCTCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: RCRMCHSGLMVEYFP*NTISMGEVATPPPR Trigger: CCTGGGAGGAGGAGTGGCCACTTCTCCCATGCTGATTGTGTTTCACGGGAAGTATTCCACCATCAACCCACTGTGGCACATACGGCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020485.11 ENSMUST00000065815.14 ENSMUST00000150269.8 |
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| CDS GCA 90 bp | AATGCTGTTGATGGCTGCCATGGCTGCACCCATTCTCCCTGCTGCTaGACAGATCACCACTGGAATCTCTTCTTCCATGTCCTCGGGGGA | + |
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Preference number: 5 (lower is better) Translates to: NAVDGCHGCTHSPCC*TDHHWNLFFHVLGG Trigger: TCCCCCGAGGACATGGAAGAAGAGATTCCAGTGGTGATCTGTGCAGCAGCAGGGAGAATGGGTGCAGCCATGGCAGCCATCAACAGCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020485.11 ENSMUST00000065815.14 |
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| CDS GCA 90 bp | GTAAATGCTGTTGATGGCTGCCATGGCTGCACCCATTCTCCCTGCTaGTGCACAGATCACCACTGGAATCTCTTCTTCCATGTCCTCGGG | + |
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Preference number: 5 (lower is better) Translates to: VNAVDGCHGCTHSPC*CTDHHWNLFFHVLG Trigger: CCCGAGGACATGGAAGAAGAGATTCCAGTGGTGATCTGTGCAGCAGCAGGGAGAATGGGTGCAGCCATGGCAGCCATCAACAGCATTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020485.11 ENSMUST00000065815.14 |
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| CDS TCA 90 bp | TTGCATCAGGGTTCCAGCCGAGGTGCCGTATGTGCCACAGTGGGTTaGTGGTGGAATACTTCCCGTGAAACACAATCAGCATGGGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: LHQGSSRGAVCATVG*WWNTSRETQSAWEK Trigger: CTTCTCCCATGCTGATTGTGTTTCACGGGAAGTATTCCACCATCAACCCACTGTGGCACATACGGCACCTCGGCTGGAACCCTGATGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020485.11 |
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| CDS GCA 90 bp | GCTGTAAATGCTGTTGATGGCTGCCATGGCTGCACCCATTCTCCCTaGTGCTGCACAGATCACCACTGGAATCTCTTCTTCCATGTCCTC | + |
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Preference number: 5 (lower is better) Translates to: AVNAVDGCHGCTHSP*CCTDHHWNLFFHVL Trigger: GAGGACATGGAAGAAGAGATTCCAGTGGTGATCTGTGCAGCAGCAGGGAGAATGGGTGCAGCCATGGCAGCCATCAACAGCATTTACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020485.11 ENSMUST00000065815.14 |
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| CDS GCA 90 bp | GTTAGCATCGGTGTTGCTGTAAATGCTGTTGATGGCTGCCATGGCTaGACCCATTCTCCCTGCTGCTGCACAGATCACCACTGGAATCTC | + |
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Preference number: 5 (lower is better) Translates to: VSIGVAVNAVDGCHG*THSPCCCTDHHWNL Trigger: GAGATTCCAGTGGTGATCTGTGCAGCAGCAGGGAGAATGGGTGCAGCCATGGCAGCCATCAACAGCATTTACAGCAACACCGATGCTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020485.11 ENSMUST00000065815.14 ENSMUST00000155529.2 |
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| CDS CCA 90 bp | ATATCTTGCATCAGGGTTCCAGCCGAGGTGCCGTATGTGCCACAGTaGGTTGATGGTGGAATACTTCCCGTGAAACACAATCAGCATGGG | + |
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Preference number: 5 (lower is better) Translates to: ISCIRVPAEVPYVPQ*VDGGILPVKHNQHG Trigger: CCCATGCTGATTGTGTTTCACGGGAAGTATTCCACCATCAACCCACTGTGGCACATACGGCACCTCGGCTGGAACCCTGATGCAAGATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020485.11 |
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| CDS TCA 90 bp | CATTTGCAGATTCTGAGCCGAGGTGCCGTATGTGCCACAGTGGGTTaGTGGTGGAATACTTCCCGTGAAACACAATCAGCATGGGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: HLQILSRGAVCATVG*WWNTSRETQSAWEK Trigger: CTTCTCCCATGCTGATTGTGTTTCACGGGAAGTATTCCACCATCAACCCACTGTGGCACATACGGCACCTCGGCTCAGAATCTGCAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065815.14 |
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| CDS TCA 90 bp | TCCATTTTGCACACGTGTCGAGGTGCCGTATGTGCCACAGTGGGTTaGTGGTGGAATACTTCCCGTGAAACACAATCAGCATGGGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: SILHTCRGAVCATVG*WWNTSRETQSAWEK Trigger: CTTCTCCCATGCTGATTGTGTTTCACGGGAAGTATTCCACCATCAACCCACTGTGGCACATACGGCACCTCGACACGTGTGCAAAATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150269.8 |
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| CDS GCA 90 bp | TCCCAGGGTTTATGTCTTCCATTCCAGTGGAGTAGTTTAGCTTCCTaGAGGAAGTGCTCCGAATATCTTGCATCAGGGTTCCAGCCGAGG | + |
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Preference number: 5 (lower is better) Translates to: SQGLCLPFQWSSLAS*RKCSEYLASGFQPR Trigger: CCTCGGCTGGAACCCTGATGCAAGATATTCGGAGCACTTCCTGCAGGAAGCTAAACTACTCCACTGGAATGGAAGACATAAACCCTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020485.11 |
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| CDS TCA 90 bp | CACTTCCCTCTGGCAACTAAAGACACCATTTGCATTTGCAGATTCTaGGCCGAGGTGCCGTATGTGCCACAGTGGGTTGATGGTGGAATA | + |
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Preference number: 5 (lower is better) Translates to: HFPLATKDTICICRF*AEVPYVPQWVDGGI Trigger: TATTCCACCATCAACCCACTGTGGCACATACGGCACCTCGGCTCAGAATCTGCAAATGCAAATGGTGTCTTTAGTTGCCAGAGGGAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065815.14 |
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| CDS GCA 90 bp | TTATGTCTTCCATTCCAGTGGAGTAGTTTAGCTTCCTGCAGGAAGTaGTCCGAATATCTTGCATCAGGGTTCCAGCCGAGGTGCCGTATG | + |
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Preference number: 5 (lower is better) Translates to: LCLPFQWSSLASCRK*SEYLASGFQPRCRM Trigger: CATACGGCACCTCGGCTGGAACCCTGATGCAAGATATTCGGAGCACTTCCTGCAGGAAGCTAAACTACTCCACTGGAATGGAAGACATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020485.11 |
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| CDS CCA 90 bp | CTTTTTCCATTTTGCACACGTGTCGAGGTGCCGTATGTGCCACAGTaGGTTGATGGTGGAATACTTCCCGTGAAACACAATCAGCATGGG | + |
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Preference number: 5 (lower is better) Translates to: LFPFCTRVEVPYVPQ*VDGGILPVKHNQHG Trigger: CCCATGCTGATTGTGTTTCACGGGAAGTATTCCACCATCAACCCACTGTGGCACATACGGCACCTCGACACGTGTGCAAAATGGAAAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150269.8 |
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| CDS CCA 90 bp | GGAATTGAACCTGGGTCTTCTCAAAGAACAGCCAGCGCACCTAACTaGAGCCATCTCTCCAACCCTAGTCAGAATCTTGAATCCTGGAAT | + |
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Preference number: 5 (lower is better) Translates to: GIEPGSSQRTASAPN*SHLSNPSQNLESWN Trigger: ATTCCAGGATTCAAGATTCTGACTAGGGTTGGAGAGATGGCTCCAGTTAGGTGCGCTGGCTGTTCTTTGAGAAGACCCAGGTTCAATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065815.14 |
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| CDS TCA 90 bp | GTGTTTCCATTCAGTCATGTTGGCAACAATCACACCAGGATTGAATaGGCAGGTGCTGGGGCTGATGCCAAGGTCCTTTATGGTCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: VFPFSHVGNNHTRIE*AGAGADAKVLYGLL Trigger: AAGAAGACCATAAAGGACCTTGGCATCAGCCCCAGCACCTGCTCATTCAATCCTGGTGTGATTGTTGCCAACATGACTGAATGGAAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020485.11 ENSMUST00000065815.14 |
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| CDS TCA 90 bp | ATCCCTGCAGGGTCAGGAACAAACCAGCTTTCCCATAAGTCATTGTaGACACTAGGAAAGTCCCAGGGTTTATGTCTTCCATTCCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: IPAGSGTNQLSHKSL*TLGKSQGLCLPFQW Trigger: CCACTGGAATGGAAGACATAAACCCTGGGACTTTCCTAGTGTTCACAATGACTTATGGGAAAGCTGGTTTGTTCCTGACCCTGCAGGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020485.11 |
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| CDS-3UTR CAA 90 bp | CCAAACCTTATAGGGAAAACGGGATTCTTTTCCTCAGAAAGGTTGTGCCCTTTCATGTGCCACAGTGGGTaGATGGTGGAATACTTCCCG | + |
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Preference number: 5 (lower is better) Translates to: PNLIGKTGFFSSERLCPFMCHSG*MVEYFP Trigger: CGGGAAGTATTCCACCATCAACCCACTGTGGCACAT...GAAAGGGCACAACCTTTCTGAGGAAAAGAATCCCGTTTTCCCTATAAGGTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150269.8 |
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| CDS CCA 90 bp | TCCACATTCTTCTGCATCCACTTTTCCAGCTGTTTGGTGATGCGCTaGTGTTTCCATTCAGTCATGTTGGCAACAATCACACCAGGATTG | + |
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Preference number: 5 (lower is better) Translates to: STFFCIHFSSCLVMR*CFHSVMLATITPGL Trigger: CAATCCTGGTGTGATTGTTGCCAACATGACTGAATGGAAACACCAGCGCATCACCAAACAGCTGGAAAAGTGGATGCAGAAGAATGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020485.11 ENSMUST00000065815.14 |
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| CDS CCA 90 bp | CCTAACTGGAGCCATCTCTCCAACCCTAGTCAGAATCTTGAATCCTaGAATGCTCACTTCCCTCTGGCAACTAAAGACACCATTTGCATT | + |
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Preference number: 5 (lower is better) Translates to: PNWSHLSNPSQNLES*NAHFPLATKDTICI Trigger: AATGCAAATGGTGTCTTTAGTTGCCAGAGGGAAGTGAGCATTCCAGGATTCAAGATTCTGACTAGGGTTGGAGAGATGGCTCCAGTTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065815.14 |
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| CDS TCA 90 bp | GGTTTTCTTCCACATTCTTCTGCATCCACTTTTCCAGCTGTTTGGTaGTGCGCTGGTGTTTCCATTCAGTCATGTTGGCAACAATCACAC | + |
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Preference number: 5 (lower is better) Translates to: GFLPHSSASTFPAVW*CAGVSIQSCWQQSH Trigger: GTGTGATTGTTGCCAACATGACTGAATGGAAACACCAGCGCATCACCAAACAGCTGGAAAAGTGGATGCAGAAGAATGTGGAAGAAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020485.11 ENSMUST00000065815.14 |
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| CDS TCA 90 bp | ATGTTCGATCCATTTTCTGCTTTGTCCTTAAGCACGGCTCCCTTATaGACTTTCTTGTACAGAATCCCACAGAGTGTCAGGACCAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: MFDPFSALSLSTAPL*TFLYRIPQSVRTRR Trigger: TCTTCTGGTCCTGACACTCTGTGGGATTCTGTACAAGAAAGTTCATAAGGGAGCCGTGCTTAAGGACAAAGCAGAAAATGGATCGAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125505.3 |
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| CDS GCA 72 bp | GCTGTTGATGGCTGCCATGGCTGCACCCATTCTCCCTaGTGCTGCACAGATCACCACTGGAATCTCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: AVDGCHGCTHSP*CCTDHHWNLFF Trigger: GAAGAAGAGATTCCAGTGGTGATCTGTGCAGCAGCAGGGAGAATGGGTGCAGCCATGGCAGCCATCAACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020485.11 ENSMUST00000065815.14 ENSMUST00000155529.2 |
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| CDS GCA 72 bp | GGTGTTGCTGTAAATGCTGTTGATGGCTGCCATGGCTaGACCCATTCTCCCTGCTGCTGCACAGATCACCAC | + |
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Preference number: 6 (lower is better) Translates to: GVAVNAVDGCHG*THSPCCCTDHH Trigger: GTGGTGATCTGTGCAGCAGCAGGGAGAATGGGTGCAGCCATGGCAGCCATCAACAGCATTTACAGCAACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020485.11 ENSMUST00000065815.14 ENSMUST00000155529.2 |
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| CDS TCA 72 bp | GGTTCCAGCCGAGGTGCCGTATGTGCCACAGTGGGTTaGTGGTGGAATACTTCCCGTGAAACACAATCAGCA | + |
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Preference number: 6 (lower is better) Translates to: GSSRGAVCATVG*WWNTSRETQSA Trigger: TGCTGATTGTGTTTCACGGGAAGTATTCCACCATCAACCCACTGTGGCACATACGGCACCTCGGCTGGAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020485.11 |
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| CDS GCA 72 bp | GTTGATGGCTGCCATGGCTGCACCCATTCTCCCTGCTaGTGCACAGATCACCACTGGAATCTCTTCTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: VDGCHGCTHSPC*CTDHHWNLFFH Trigger: ATGGAAGAAGAGATTCCAGTGGTGATCTGTGCAGCAGCAGGGAGAATGGGTGCAGCCATGGCAGCCATCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020485.11 ENSMUST00000065815.14 ENSMUST00000155529.2 |
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| CDS TCA 72 bp | CACACGTGTCGAGGTGCCGTATGTGCCACAGTGGGTTaGTGGTGGAATACTTCCCGTGAAACACAATCAGCA | + |
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Preference number: 6 (lower is better) Translates to: HTCRGAVCATVG*WWNTSRETQSA Trigger: TGCTGATTGTGTTTCACGGGAAGTATTCCACCATCAACCCACTGTGGCACATACGGCACCTCGACACGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150269.8 |
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| CDS GCA 72 bp | CCATTCCAGTGGAGTAGTTTAGCTTCCTGCAGGAAGTaGTCCGAATATCTTGCATCAGGGTTCCAGCCGAGG | + |
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Preference number: 6 (lower is better) Translates to: PFQWSSLASCRK*SEYLASGFQPR Trigger: CCTCGGCTGGAACCCTGATGCAAGATATTCGGAGCACTTCCTGCAGGAAGCTAAACTACTCCACTGGAATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020485.11 |
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| CDS CCA 72 bp | ATCAGGGTTCCAGCCGAGGTGCCGTATGTGCCACAGTaGGTTGATGGTGGAATACTTCCCGTGAAACACAAT | + |
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Preference number: 6 (lower is better) Translates to: IRVPAEVPYVPQ*VDGGILPVKHN Trigger: ATTGTGTTTCACGGGAAGTATTCCACCATCAACCCACTGTGGCACATACGGCACCTCGGCTGGAACCCTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020485.11 |
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| CDS CAA 72 bp | GTCTGCTCCAGGGTCTGTCCTTTTCCTTTTTCCATTTaGCACACGTGTCGAGGTGCCGTATGTGCCACAGTG | + |
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Preference number: 6 (lower is better) Translates to: VCSRVCPFPFSI*HTCRGAVCATV Trigger: CACTGTGGCACATACGGCACCTCGACACGTGTGCAAAATGGAAAAAGGAAAAGGACAGACCCTGGAGCAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150269.8 |
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| CDS CAA 90 bp | CCAGCGCACCTAACTGGAGCCATCTCTCCAACCCTAGTCAGAATCTaGAATCCTGGAATGCTCACTTCCCTCTGGCAACTAAAGACACCA | + |
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Preference number: 6 (lower is better) Translates to: PAHLTGAISPTLVRI*NPGMLTSLWQLKTP Trigger: TGGTGTCTTTAGTTGCCAGAGGGAAGTGAGCATTCCAGGATTCAAGATTCTGACTAGGGTTGGAGAGATGGCTCCAGTTAGGTGCGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065815.14 |
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| CDS TCA 72 bp | ATGTGCCACAGTGGGTTGATGGTGGAATACTTCCCGTaGAACACAATCAGCATGGGAGAAGTGGCCACTCCT | + |
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Preference number: 6 (lower is better) Translates to: MCHSGLMVEYFP*NTISMGEVATP Trigger: AGGAGTGGCCACTTCTCCCATGCTGATTGTGTTTCACGGGAAGTATTCCACCATCAACCCACTGTGGCACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020485.11 ENSMUST00000065815.14 ENSMUST00000150269.8 |
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| CDS TCA 72 bp | ATTCTGAGCCGAGGTGCCGTATGTGCCACAGTGGGTTaGTGGTGGAATACTTCCCGTGAAACACAATCAGCA | + |
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Preference number: 6 (lower is better) Translates to: ILSRGAVCATVG*WWNTSRETQSA Trigger: TGCTGATTGTGTTTCACGGGAAGTATTCCACCATCAACCCACTGTGGCACATACGGCACCTCGGCTCAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065815.14 |
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| CDS CCA 72 bp | CCTGGGTCTTCTCAAAGAACAGCCAGCGCACCTAACTaGAGCCATCTCTCCAACCCTAGTCAGAATCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: PGSSQRTASAPN*SHLSNPSQNLE Trigger: TTCAAGATTCTGACTAGGGTTGGAGAGATGGCTCCAGTTAGGTGCGCTGGCTGTTCTTTGAGAAGACCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065815.14 |
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| CDS CAA 90 bp | TTTTCCAGCTGTTTGGTGATGCGCTGGTGTTTCCATTCAGTCATGTaGGCAACAATCACACCAGGATTGAATGAGCAGGTGCTGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: FSSCLVMRWCFHSVM*ATITPGLNEQVLGL Trigger: CAGCCCCAGCACCTGCTCATTCAATCCTGGTGTGATTGTTGCCAACATGACTGAATGGAAACACCAGCGCATCACCAAACAGCTGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020485.11 ENSMUST00000065815.14 |
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| CDS GCA 72 bp | AAGACACCATTTGCATTTGCAGATTCTGAGCCGAGGTaGCGTATGTGCCACAGTGGGTTGATGGTGGAATAC | + |
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Preference number: 6 (lower is better) Translates to: KTPFAFADSEPR*RMCHSGLMVEY Trigger: GTATTCCACCATCAACCCACTGTGGCACATACGGCACCTCGGCTCAGAATCTGCAAATGCAAATGGTGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065815.14 |
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| CDS CCA 72 bp | TTTTGCACACGTGTCGAGGTGCCGTATGTGCCACAGTaGGTTGATGGTGGAATACTTCCCGTGAAACACAAT | + |
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Preference number: 6 (lower is better) Translates to: FCTRVEVPYVPQ*VDGGILPVKHN Trigger: ATTGTGTTTCACGGGAAGTATTCCACCATCAACCCACTGTGGCACATACGGCACCTCGACACGTGTGCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150269.8 |
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| CDS TCA 72 bp | TTCAGTCATGTTGGCAACAATCACACCAGGATTGAATaGGCAGGTGCTGGGGCTGATGCCAAGGTCCTTTAT | + |
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Preference number: 6 (lower is better) Translates to: FSHVGNNHTRIE*AGAGADAKVLY Trigger: ATAAAGGACCTTGGCATCAGCCCCAGCACCTGCTCATTCAATCCTGGTGTGATTGTTGCCAACATGACTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020485.11 ENSMUST00000065815.14 |
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| CDS CCA 72 bp | CTAGGAAAGTCCCAGGGTTTATGTCTTCCATTCCAGTaGAGTAGTTTAGCTTCCTGCAGGAAGTGCTCCGAA | + |
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Preference number: 6 (lower is better) Translates to: LGKSQGLCLPFQ*SSLASCRKCSE Trigger: TTCGGAGCACTTCCTGCAGGAAGCTAAACTACTCCACTGGAATGGAAGACATAAACCCTGGGACTTTCCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020485.11 |
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| CDS CCA 72 bp | AGCCATCTCTCCAACCCTAGTCAGAATCTTGAATCCTaGAATGCTCACTTCCCTCTGGCAACTAAAGACACC | + |
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Preference number: 6 (lower is better) Translates to: SHLSNPSQNLES*NAHFPLATKDT Trigger: GGTGTCTTTAGTTGCCAGAGGGAAGTGAGCATTCCAGGATTCAAGATTCTGACTAGGGTTGGAGAGATGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065815.14 |
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| CDS CAA 72 bp | CTAACTGGAGCCATCTCTCCAACCCTAGTCAGAATCTaGAATCCTGGAATGCTCACTTCCCTCTGGCAACTA | + |
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Preference number: 6 (lower is better) Translates to: LTGAISPTLVRI*NPGMLTSLWQL Trigger: TAGTTGCCAGAGGGAAGTGAGCATTCCAGGATTCAAGATTCTGACTAGGGTTGGAGAGATGGCTCCAGTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065815.14 |
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| CDS TCA 72 bp | TCAACGTCTGCTTTGTCCTTAAGCACGGCTCCCTTATaGACTTTCTTGTACAGAATCCCACAGAGTGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: STSALSLSTAPL*TFLYRIPQSVR Trigger: CCTGACACTCTGTGGGATTCTGTACAAGAAAGTTCATAAGGGAGCCGTGCTTAAGGACAAAGCAGACGTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020485.11 ENSMUST00000065815.14 |
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| CDS CAA 72 bp | TGTTTGGTGATGCGCTGGTGTTTCCATTCAGTCATGTaGGCAACAATCACACCAGGATTGAATGAGCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: CLVMRWCFHSVM*ATITPGLNEQV Trigger: CACCTGCTCATTCAATCCTGGTGTGATTGTTGCCAACATGACTGAATGGAAACACCAGCGCATCACCAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020485.11 ENSMUST00000065815.14 |
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| CDS TCA 72 bp | GGGTCAGGAACAAACCAGCTTTCCCATAAGTCATTGTaGACACTAGGAAAGTCCCAGGGTTTATGTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: GSGTNQLSHKSL*TLGKSQGLCLP Trigger: TGGAAGACATAAACCCTGGGACTTTCCTAGTGTTCACAATGACTTATGGGAAAGCTGGTTTGTTCCTGACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020485.11 |
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| CDS TCA 72 bp | CCATTTTCTGCTTTGTCCTTAAGCACGGCTCCCTTATaGACTTTCTTGTACAGAATCCCACAGAGTGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: PFSALSLSTAPL*TFLYRIPQSVR Trigger: CCTGACACTCTGTGGGATTCTGTACAAGAAAGTTCATAAGGGAGCCGTGCTTAAGGACAAAGCAGAAAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125505.3 |
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| CDS GCA 72 bp | TTATGTCTTCCATTCCAGTGGAGTAGTTTAGCTTCCTaGAGGAAGTGCTCCGAATATCTTGCATCAGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: LCLPFQWSSLAS*RKCSEYLASGF Trigger: GAACCCTGATGCAAGATATTCGGAGCACTTCCTGCAGGAAGCTAAACTACTCCACTGGAATGGAAGACATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020485.11 |
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| CDS CAA 72 bp | TCTTCCACATTCTTCTGCATCCACTTTTCCAGCTGTTaGGTGATGCGCTGGTGTTTCCATTCAGTCATGTTG | + |
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Preference number: 6 (lower is better) Translates to: SSTFFCIHFSSC*VMRWCFHSVML Trigger: CAACATGACTGAATGGAAACACCAGCGCATCACCAAACAGCTGGAAAAGTGGATGCAGAAGAATGTGGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020485.11 ENSMUST00000065815.14 |
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| CDS CCA 72 bp | GTCAGAATCTTGAATCCTGGAATGCTCACTTCCCTCTaGCAACTAAAGACACCATTTGCATTTGCAGATTCT | + |
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Preference number: 6 (lower is better) Translates to: VRILNPGMLTSL*QLKTPFAFADS Trigger: AGAATCTGCAAATGCAAATGGTGTCTTTAGTTGCCAGAGGGAAGTGAGCATTCCAGGATTCAAGATTCTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065815.14 |
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| CDS CAA 72 bp | GAGTCTGGTCTAATCTTCCCCTTGAGGACTGTAGGATaGAACTCCACAATTTTGAAGTTTATTTCTCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: ESGLIFPLRTVG*NSTILKFISLS Trigger: ACTGAGAGAAATAAACTTCAAAATTGTGGAGTTCAATCCTACAGTCCTCAAGGGGAAGATTAGACCAGACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020485.11 ENSMUST00000065815.14 |
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