Pregenerated sensors for GLT8D1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021916Ensembl transcript IDs: ENSMUST00000022476.9, ENSMUST00000168584.9
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTAAAGCAAACATTTGGTAAGGCAGATGGAGCCGTGGTAGTCATCTaGATATCTATGACTTCTACCCAGCTGAAGTGTTTTCTGTGGTTG | + |
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Preference number: 1 (lower is better) Translates to: VKQTFGKADGAVVVI*ISMTSTQLKCFLWL Trigger: CAACCACAGAAAACACTTCAGCTGGGTAGAAGTCATAGATATCCAGATGACTACCACGGCTCCATCTGCCTTACCAAATGTTTGCTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| 3UTR-3UTR CCA 90 bp | CAAACCAGGCCACAAGGTACAAAACTAAAACCAAACAGCAGTTCCTACCTACAGGCCGTGGTAGTCATCTaGATATCTATGACTTCTACC | + |
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Preference number: 2 (lower is better) Translates to: QTRPQGTKLKPNSSSYLQAVVVI*ISMTST Trigger: GGTAGAAGTCATAGATATCCAGATGACTACCACGGC...CTGTAGGTAGGAACTGCTGTTTGGTTTTAGTTTTGTACCTTGTGGCCTGGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| 3UTR-3UTR GCA 90 bp | TATTTACAAACCAGGCCACAAGGTACAAAACTAAAACCAAACAGCAGTTCCTACCTAGATGCAGTTAAATaGTGGAGTTCTCTGTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: YLQTRPQGTKLKPNSSSYLDAVK*WSSLSF Trigger: GAAGGACAGAGAACTCCAGCATTTAACTGCATCTAG...GTAGGAACTGCTGTTTGGTTTTAGTTTTGTACCTTGTGGCCTGGTTTGTAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CCA 90 bp | CTACAGCAGCTAGATGCAGTTAAATGCTGGAGTTCTCTGTCCTTCAAGTCAGCATGGCGACAAAGTCTATaGGCTGAAGCCCCACAATTC | + |
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Preference number: 4 (lower is better) Translates to: LQQLDAVKCWSSLSFKSAWRQSL*AEAPQF Trigger: GAATTGTGGGGCTTCAGCCCATAGACTTTGTCGCCA...TGCTGACTTGAAGGACAGAGAACTCCAGCATTTAACTGCATCTAGCTGCTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CCA 90 bp | CCAAACAGCAGTTCCTACCTACAGCAGCTAGATGCAGTTAAATGCTGGAGTTCTGATGAACGCTGTTTATaGCTGCAATGGTCCCACCCA | + |
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Preference number: 4 (lower is better) Translates to: PNSSSYLQQLDAVKCWSSDERCL*LQWSHP Trigger: TGGGTGGGACCATTGCAGCCATAAACAGCGTTCATC...AGAACTCCAGCATTTAACTGCATCTAGCTGCTGTAGGTAGGAACTGCTGTTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CCA 90 bp | TACCTACAGCAGCTAGATGCAGTTAAATGCTGGAGTTCTCTGTCCTTCAAGTCAGCACTGGAACCAAGATaGCGGACATTCCACATAGGG | + |
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Preference number: 4 (lower is better) Translates to: YLQQLDAVKCWSSLSFKSALEPR*RTFHIG Trigger: CCCTATGTGGAATGTCCGCCATCTTGGTTCCAGTGC...TGACTTGAAGGACAGAGAACTCCAGCATTTAACTGCATCTAGCTGCTGTAGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR GCA 90 bp | GTAAAGCAAACATTTGGTAAGGCAGATGGAGCCGTGGTAGTCATCTGGATATCTGGACCGGAGATGGTCTaGTGTGCTGTTGAATGTAAC | + |
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Preference number: 4 (lower is better) Translates to: VKQTFGKADGAVVVIWISGPEMV*CAVECN Trigger: GTTACATTCAACAGCACAGCAGACCATCTCCGGTCC...AGATATCCAGATGACTACCACGGCTCCATCTGCCTTACCAAATGTTTGCTTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR GCA 90 bp | GTTTTCTGTGGTTGGTATAGAGAAACTCAAGCCCTACAACTGTTACCTTCCCACGGACCGGAGATGGTCTaGTGTGCTGTTGAATGTAAC | + |
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Preference number: 4 (lower is better) Translates to: VFCGWYRETQALQLLPSHGPEMV*CAVECN Trigger: GTTACATTCAACAGCACAGCAGACCATCTCCGGTCC...GTGGGAAGGTAACAGTTGTAGGGCTTGAGTTTCTCTATACCAACCACAGAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CCA 90 bp | TACCTACAGCAGCTAGATGCAGTTAAATGCTGGAGTTCTCTGTCCTTCAAGTCATGGCGACAAAGTCTATaGGCTGAAGCCCCACAATTC | + |
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Preference number: 4 (lower is better) Translates to: YLQQLDAVKCWSSLSFKSWRQSL*AEAPQF Trigger: GAATTGTGGGGCTTCAGCCCATAGACTTTGTCGCCA...TGACTTGAAGGACAGAGAACTCCAGCATTTAACTGCATCTAGCTGCTGTAGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CCA 90 bp | GTGTTTTCTGTGGTTGGTATAGAGAAACTCAAGCCCTACAACTGTTACCTTCCCTTCATGGACTCCCCCTaGTCAGGATCCTGCTTTACT | + |
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Preference number: 4 (lower is better) Translates to: VFSVVGIEKLKPYNCYLPFMDSP*SGSCFT Trigger: AGTAAAGCAGGATCCTGACCAGGGGGAGTCCATGAA...GGGAAGGTAACAGTTGTAGGGCTTGAGTTTCTCTATACCAACCACAGAAAACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CCA 90 bp | CCAAACAGCAGTTCCTACCTACAGCAGCTAGATGCAGTTAAATGCTGGAGTTCTAGGTTAATGGTTTCATaGACTCCCCCTGGTCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: PNSSSYLQQLDAVKCWSSRLMVS*TPPGQD Trigger: ATCCTGACCAGGGGGAGTCCATGAAACCATTAACCT...AGAACTCCAGCATTTAACTGCATCTAGCTGCTGTAGGTAGGAACTGCTGTTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR TCA 90 bp | GTTTTCTGTGGTTGGTATAGAGAAACTCAAGCCCTACAACTGTTACCTTCCCACCCAAACATCAGCATATaGAGCAGTTCTTCCCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: VFCGWYRETQALQLLPSHPNISI*SSSSPR Trigger: CCTTGGGGAAGAACTGCTTCATATGCTGATGTTTGG...GTGGGAAGGTAACAGTTGTAGGGCTTGAGTTTCTCTATACCAACCACAGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR TCA 90 bp | TACCTACAGCAGCTAGATGCAGTTAAATGCTGGAGTTCTCTGTCCTTCAAGTCACCAAACATCAGCATATaGAGCAGTTCTTCCCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: YLQQLDAVKCWSSLSFKSPNISI*SSSSPR Trigger: CCTTGGGGAAGAACTGCTTCATATGCTGATGTTTGG...TGACTTGAAGGACAGAGAACTCCAGCATTTAACTGCATCTAGCTGCTGTAGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR GCA 90 bp | AGTATAGTAAAGCAAACATTTGGTAAGGCAGATGGAGCCGTGGTAGTCATCTGGCCCTGGTCAGGATCCTaGTTTACTTTCCCTTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: SIVKQTFGKADGAVVVIWPWSGS*FTFPSK Trigger: TTTGGAAGGGAAAGTAAAGCAGGATCCTGACCAGGG...CCAGATGACTACCACGGCTCCATCTGCCTTACCAAATGTTTGCTTTACTATACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CCA 90 bp | CTACAGCAGCTAGATGCAGTTAAATGCTGGAGTTCTCTGTCCTTCAAGTCAGCAATGTCCTGGCTTCAGTaGTGTATTGTACAAGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: LQQLDAVKCWSSLSFKSAMSWLQ*CIVQGK Trigger: CTTGCCTTGTACAATACACCACTGAAGCCAGGACAT...TGCTGACTTGAAGGACAGAGAACTCCAGCATTTAACTGCATCTAGCTGCTGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR TCA 90 bp | CTACAGCAGCTAGATGCAGTTAAATGCTGGAGTTCTCTGTCCTTCAAGTCAGCAGTCTTCGGATTAAACTaGATTTTCCTGTTGGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQQLDAVKCWSSLSFKSAVFGLN*IFLLGL Trigger: CAGACCCAACAGGAAAATTCAGTTTAATCCGAAGAC...TGCTGACTTGAAGGACAGAGAACTCCAGCATTTAACTGCATCTAGCTGCTGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR GCA 90 bp | GTTTTCTGTGGTTGGTATAGAGAAACTCAAGCCCTACAACTGTTACCTTCCCACTGCCTGCCAGAGTTCTaGTGTATAATCCCTCTTCTA | + |
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Preference number: 4 (lower is better) Translates to: VFCGWYRETQALQLLPSHCLPEF*CIIPLL Trigger: TAGAAGAGGGATTATACAGCAGAACTCTGGCAGGCA...GTGGGAAGGTAACAGTTGTAGGGCTTGAGTTTCTCTATACCAACCACAGAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CCA 90 bp | AAACTAAAACCAAACAGCAGTTCCTACCTACAGCAGCTAGATGCAGTTAAATGCTTCATGGACTCCCCCTaGTCAGGATCCTGCTTTACT | + |
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Preference number: 4 (lower is better) Translates to: KLKPNSSSYLQQLDAVKCFMDSP*SGSCFT Trigger: AGTAAAGCAGGATCCTGACCAGGGGGAGTCCATGAA...GCATTTAACTGCATCTAGCTGCTGTAGGTAGGAACTGCTGTTTGGTTTTAGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CCA 90 bp | TATTTACAAACCAGGCCACAAGGTACAAAACTAAAACCAAACAGCAGTTCCTACGCACTGGAACCAAGATaGCGGACATTCCACATAGGG | + |
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Preference number: 4 (lower is better) Translates to: YLQTRPQGTKLKPNSSSYALEPR*RTFHIG Trigger: CCCTATGTGGAATGTCCGCCATCTTGGTTCCAGTGC...GTAGGAACTGCTGTTTGGTTTTAGTTTTGTACCTTGTGGCCTGGTTTGTAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR TCA 90 bp | CAAACCAGGCCACAAGGTACAAAACTAAAACCAAACAGCAGTTCCTACCTACAGACAAACTGCTCAAGCTaGGGAAGTTATGGTGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: QTRPQGTKLKPNSSSYLQTNCSS*GSYGAK Trigger: TTTTGCACCATAACTTCCTCAGCTTGAGCAGTTTGT...CTGTAGGTAGGAACTGCTGTTTGGTTTTAGTTTTGTACCTTGTGGCCTGGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR TCA 90 bp | TACCTACAGCAGCTAGATGCAGTTAAATGCTGGAGTTCTCTGTCCTTCAAGTCAGTCTTCGGATTAAACTaGATTTTCCTGTTGGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: YLQQLDAVKCWSSLSFKSVFGLN*IFLLGL Trigger: CAGACCCAACAGGAAAATTCAGTTTAATCCGAAGAC...TGACTTGAAGGACAGAGAACTCCAGCATTTAACTGCATCTAGCTGCTGTAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR GCA 90 bp | TACCTACAGCAGCTAGATGCAGTTAAATGCTGGAGTTCTCTGTCCTTCAAGTCAGTATATGGCTTTCTTTaGACTGGGAACCAGAATTGG | + |
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Preference number: 4 (lower is better) Translates to: YLQQLDAVKCWSSLSFKSVYGFL*TGNQNW Trigger: CCAATTCTGGTTCCCAGTGCAAAGAAAGCCATATAC...TGACTTGAAGGACAGAGAACTCCAGCATTTAACTGCATCTAGCTGCTGTAGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR GCA 90 bp | GTAAAGCAAACATTTGGTAAGGCAGATGGAGCCGTGGTAGTCATCTGGATATCTGTATATGGCTTTCTTTaGACTGGGAACCAGAATTGG | + |
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Preference number: 4 (lower is better) Translates to: VKQTFGKADGAVVVIWISVYGFL*TGNQNW Trigger: CCAATTCTGGTTCCCAGTGCAAAGAAAGCCATATAC...AGATATCCAGATGACTACCACGGCTCCATCTGCCTTACCAAATGTTTGCTTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CCA 90 bp | CTGGAGTTCTCTGTCCTTCAAGTCAGCAGTATAGTAAAGCAAACATTTGGTAAGAGGTTAATGGTTTCATaGACTCCCCCTGGTCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: LEFSVLQVSSIVKQTFGKRLMVS*TPPGQD Trigger: ATCCTGACCAGGGGGAGTCCATGAAACCATTAACCT...CTTACCAAATGTTTGCTTTACTATACTGCTGACTTGAAGGACAGAGAACTCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CCA 90 bp | AGTATAGTAAAGCAAACATTTGGTAAGGCAGATGGAGCCGTGGTAGTCATCTGGACTGGGAACCAGAATTaGCAAGTAGAACCTTGCAAA | + |
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Preference number: 4 (lower is better) Translates to: SIVKQTFGKADGAVVVIWTGNQN*QVEPCK Trigger: TTTGCAAGGTTCTACTTGCCAATTCTGGTTCCCAGT...CCAGATGACTACCACGGCTCCATCTGCCTTACCAAATGTTTGCTTTACTATACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CCA 90 bp | GGTTGGTATAGAGAAACTCAAGCCCTACAACTGTTACCTTCCCACATAGTGTGTTCCAGTGAAGTAACTTaGCAGCTTTTACAAACTGGG | + |
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Preference number: 4 (lower is better) Translates to: GWYRETQALQLLPSHIVCSSEVT*QLLQTG Trigger: CCCAGTTTGTAAAAGCTGCCAAGTTACTTCACTGGA...ACACACTATGTGGGAAGGTAACAGTTGTAGGGCTTGAGTTTCTCTATACCAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CCA 90 bp | GTAAAGCAAACATTTGGTAAGGCAGATGGAGCCGTGGTAGTCATCTGGATATCTTCCAGTGAAGTAACTTaGCAGCTTTTACAAACTGGG | + |
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Preference number: 4 (lower is better) Translates to: VKQTFGKADGAVVVIWISSSEVT*QLLQTG Trigger: CCCAGTTTGTAAAAGCTGCCAAGTTACTTCACTGGA...AGATATCCAGATGACTACCACGGCTCCATCTGCCTTACCAAATGTTTGCTTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CCA 90 bp | CCAAACAGCAGTTCCTACCTACAGCAGCTAGATGCAGTTAAATGCTGGAGTTCTTTTTCCTGTTGGGTCTaGAATATACCACTTTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: PNSSSYLQQLDAVKCWSSFSCWV*NIPLFP Trigger: TGGGAAAAGTGGTATATTCCAGACCCAACAGGAAAA...AGAACTCCAGCATTTAACTGCATCTAGCTGCTGTAGGTAGGAACTGCTGTTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR TCA 90 bp | TACCTACAGCAGCTAGATGCAGTTAAATGCTGGAGTTCTCTGTCCTTCAAGTCAATCCCTCTTCTACATTaGGCTTCATCCATTTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: YLQQLDAVKCWSSLSFKSIPLLH*ASSIFP Trigger: TGGAAAAATGGATGAAGCTCAATGTAGAAGAGGGAT...TGACTTGAAGGACAGAGAACTCCAGCATTTAACTGCATCTAGCTGCTGTAGGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR GCA 90 bp | AGAAACTCAAGCCCTACAACTGTTACCTTCCCACATAGTGTGTCTTCCAGAGTTCTGAGGAAGTTATGGTaGAAAACCAGTAAGAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: RNSSPTTVTFPHSVSSRVLRKLW*KTSKKR Trigger: TCTCTTCTTACTGGTTTTGCACCATAACTTCCTCAG...AACTCTGGAAGACACACTATGTGGGAAGGTAACAGTTGTAGGGCTTGAGTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR GCA 90 bp | CCAAACAGCAGTTCCTACCTACAGCAGCTAGATGCAGTTAAATGCTGGAGTTCTCCATTCAGTCAAGTTTaGAACAAAAACTCCAGGATT | + |
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Preference number: 4 (lower is better) Translates to: PNSSSYLQQLDAVKCWSSPFSQV*NKNSRI Trigger: AATCCTGGAGTTTTTGTTGCAAACTTGACTGAATGG...AGAACTCCAGCATTTAACTGCATCTAGCTGCTGTAGGTAGGAACTGCTGTTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CCA 90 bp | GTTTTCTGTGGTTGGTATAGAGAAACTCAAGCCCTACAACTGTTACCTTCCCACAAGCTGAGGAAGTTATaGTGCAAAACCAGTAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: VFCGWYRETQALQLLPSHKLRKL*CKTSKK Trigger: CTTCTTACTGGTTTTGCACCATAACTTCCTCAGCTT...GTGGGAAGGTAACAGTTGTAGGGCTTGAGTTTCTCTATACCAACCACAGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CCA 90 bp | TTCTGTGGTTGGTATAGAGAAACTCAAGCCCTACAACTGTTACCTTCCCACATAACTGGGAACCAGAATTaGCAAGTAGAACCTTGCAAA | + |
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Preference number: 4 (lower is better) Translates to: FCGWYRETQALQLLPSHITGNQN*QVEPCK Trigger: TTTGCAAGGTTCTACTTGCCAATTCTGGTTCCCAGT...TATGTGGGAAGGTAACAGTTGTAGGGCTTGAGTTTCTCTATACCAACCACAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CCA 90 bp | GTGTTTTCTGTGGTTGGTATAGAGAAACTCAAGCCCTACAACTGTTACCTTCCCTTTTCCTGTTGGGTCTaGAATATACCACTTTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: VFSVVGIEKLKPYNCYLPFSCWV*NIPLFP Trigger: TGGGAAAAGTGGTATATTCCAGACCCAACAGGAAAA...GGGAAGGTAACAGTTGTAGGGCTTGAGTTTCTCTATACCAACCACAGAAAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CCA 90 bp | CTACAGCAGCTAGATGCAGTTAAATGCTGGAGTTCTCTGTCCTTCAAGTCAGCAACTGAATTTTCCTGTTaGGTCTGGAATATACCACTT | + |
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Preference number: 4 (lower is better) Translates to: LQQLDAVKCWSSLSFKSATEFSC*VWNIPL Trigger: AAGTGGTATATTCCAGACCCAACAGGAAAATTCAGT...TGCTGACTTGAAGGACAGAGAACTCCAGCATTTAACTGCATCTAGCTGCTGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR TCA 90 bp | AGTATAGTAAAGCAAACATTTGGTAAGGCAGATGGAGCCGTGGTAGTCATCTGGTTACAATTTTGTACCTaGTGCTTTTCAAGGAACCAC | + |
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Preference number: 4 (lower is better) Translates to: SIVKQTFGKADGAVVVIWLQFCT*CFSRNH Trigger: GTGGTTCCTTGAAAAGCATCAGGTACAAAATTGTAA...CCAGATGACTACCACGGCTCCATCTGCCTTACCAAATGTTTGCTTTACTATACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR TCA 90 bp | AGAAACTCAAGCCCTACAACTGTTACCTTCCCACATAGTGTGTCTTCCAGAGTTTTACAATTTTGTACCTaGTGCTTTTCAAGGAACCAC | + |
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Preference number: 4 (lower is better) Translates to: RNSSPTTVTFPHSVSSRVLQFCT*CFSRNH Trigger: GTGGTTCCTTGAAAAGCATCAGGTACAAAATTGTAA...AACTCTGGAAGACACACTATGTGGGAAGGTAACAGTTGTAGGGCTTGAGTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR GCA 90 bp | TTCTGTGGTTGGTATAGAGAAACTCAAGCCCTACAACTGTTACCTTCCCACATACTGAGGAAGTTATGGTaGAAAACCAGTAAGAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: FCGWYRETQALQLLPSHILRKLW*KTSKKR Trigger: TCTCTTCTTACTGGTTTTGCACCATAACTTCCTCAG...TATGTGGGAAGGTAACAGTTGTAGGGCTTGAGTTTCTCTATACCAACCACAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CCA 90 bp | TGGTATAGAGAAACTCAAGCCCTACAACTGTTACCTTCCCACATAGTGTGTCTTAAGCTGAGGAAGTTATaGTGCAAAACCAGTAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: WYRETQALQLLPSHIVCLKLRKL*CKTSKK Trigger: CTTCTTACTGGTTTTGCACCATAACTTCCTCAGCTT...AAGACACACTATGTGGGAAGGTAACAGTTGTAGGGCTTGAGTTTCTCTATACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CCA 90 bp | TATTTACAAACCAGGCCACAAGGTACAAAACTAAAACCAAACAGCAGTTCCTACATGTCCTGGCTTCAGTaGTGTATTGTACAAGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: YLQTRPQGTKLKPNSSSYMSWLQ*CIVQGK Trigger: CTTGCCTTGTACAATACACCACTGAAGCCAGGACAT...GTAGGAACTGCTGTTTGGTTTTAGTTTTGTACCTTGTGGCCTGGTTTGTAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CCA 90 bp | TACCTACAGCAGCTAGATGCAGTTAAATGCTGGAGTTCTCTGTCCTTCAAGTCAAGGTGCTGGCTTTCATaGAAAGTTTACGAATTCTTT | + |
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Preference number: 4 (lower is better) Translates to: YLQQLDAVKCWSSLSFKSRCWLS*KVYEFF Trigger: AAAGAATTCGTAAACTTTCCATGAAAGCCAGCACCT...TGACTTGAAGGACAGAGAACTCCAGCATTTAACTGCATCTAGCTGCTGTAGGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CCA 90 bp | AGTATAGTAAAGCAAACATTTGGTAAGGCAGATGGAGCCGTGGTAGTCATCTGGAGGTGCTGGCTTTCATaGAAAGTTTACGAATTCTTT | + |
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Preference number: 4 (lower is better) Translates to: SIVKQTFGKADGAVVVIWRCWLS*KVYEFF Trigger: AAAGAATTCGTAAACTTTCCATGAAAGCCAGCACCT...CCAGATGACTACCACGGCTCCATCTGCCTTACCAAATGTTTGCTTTACTATACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR TCA 90 bp | TATTTACAAACCAGGCCACAAGGTACAAAACTAAAACCAAACAGCAGTTCCTACACAAACTGCTCAAGCTaGGGAAGTTATGGTGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: YLQTRPQGTKLKPNSSSYTNCSS*GSYGAK Trigger: TTTTGCACCATAACTTCCTCAGCTTGAGCAGTTTGT...GTAGGAACTGCTGTTTGGTTTTAGTTTTGTACCTTGTGGCCTGGTTTGTAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR TCA 90 bp | CTGGAGTTCTCTGTCCTTCAAGTCAGCAGTATAGTAAAGCAAACATTTGGTAAGATCCCTCTTCTACATTaGGCTTCATCCATTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LEFSVLQVSSIVKQTFGKIPLLH*ASSIFP Trigger: TGGAAAAATGGATGAAGCTCAATGTAGAAGAGGGAT...CTTACCAAATGTTTGCTTTACTATACTGCTGACTTGAAGGACAGAGAACTCCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR TCA 90 bp | CTGGAGTTCTCTGTCCTTCAAGTCAGCAGTATAGTAAAGCAAACATTTGGTAAGTGTCACCTTGTACAATaGCATCATCATCCATGTATA | + |
|
Preference number: 4 (lower is better) Translates to: LEFSVLQVSSIVKQTFGKCHLVQ*HHHPCI Trigger: TATACATGGATGATGATGTCATTGTACAAGGTGACA...CTTACCAAATGTTTGCTTTACTATACTGCTGACTTGAAGGACAGAGAACTCCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CCA 90 bp | TATTTACAAACCAGGCCACAAGGTACAAAACTAAAACCAAACAGCAGTTCCTACACTGAATTTTCCTGTTaGGTCTGGAATATACCACTT | + |
|
Preference number: 4 (lower is better) Translates to: YLQTRPQGTKLKPNSSSYTEFSC*VWNIPL Trigger: AAGTGGTATATTCCAGACCCAACAGGAAAATTCAGT...GTAGGAACTGCTGTTTGGTTTTAGTTTTGTACCTTGTGGCCTGGTTTGTAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS CCA 90 bp | CGGGAATCTCCTCTTGCCTCTCACTCACTGGATGCTGATGAGCACTaGCGACAAAGTCTATGGGCTGAAGCCCCACAATTCCCGAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: RESPLASHSLDADEH*RQSLWAEAPQFPNL Trigger: CAGATTCGGGAATTGTGGGGCTTCAGCCCATAGACTTTGTCGCCAGTGCTCATCAGCATCCAGTGAGTGAGAGGCAAGAGGAGATTCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS CCA 90 bp | AGAGGCAGCAATAACCACGGGAATCTCCTCTTGCCTCTCACTCACTaGATGCTGATGAGCACTGGCGACAAAGTCTATGGGCTGAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RGSNNHGNLLLPLTH*MLMSTGDKVYGLKP Trigger: GGGCTTCAGCCCATAGACTTTGTCGCCAGTGCTCATCAGCATCCAGTGAGTGAGAGGCAAGAGGAGATTCCCGTGGTTATTGCTGCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CAA 90 bp | CTACAGCAGCTAGATGCAGTTAAATGCTGGAGTTCTCTGTCCTTCAAGTCAGCACACGGGAATCTCCTCTaGCCTCTCACTCACTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LQQLDAVKCWSSLSFKSAHGNLL*PLTHWM Trigger: CATCCAGTGAGTGAGAGGCAAGAGGAGATTCCCGTG...TGCTGACTTGAAGGACAGAGAACTCCAGCATTTAACTGCATCTAGCTGCTGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS CCA 90 bp | GCCTCTCACTCACTGGATGCTGATGAGCACTGGCGACAAAGTCTATaGGCTGAAGCCCCACAATTCCCGAATCTGAAATGTCATTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: ASHSLDADEHWRQSL*AEAPQFPNLKCHSL Trigger: TAAAGAATGACATTTCAGATTCGGGAATTGTGGGGCTTCAGCCCATAGACTTTGTCGCCAGTGCTCATCAGCATCCAGTGAGTGAGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CAA 90 bp | GTTTTCTGTGGTTGGTATAGAGAAACTCAAGCCCTACAACTGTTACCTTCCCACCACGGGAATCTCCTCTaGCCTCTCACTCACTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: VFCGWYRETQALQLLPSHHGNLL*PLTHWM Trigger: CATCCAGTGAGTGAGAGGCAAGAGGAGATTCCCGTG...GTGGGAAGGTAACAGTTGTAGGGCTTGAGTTTCTCTATACCAACCACAGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CAA 90 bp | CTACAGCAGCTAGATGCAGTTAAATGCTGGAGTTCTCTGTCCTTCAAGTCAGCATTGGCAAGTAGAACCTaGCAAAGGTTAATGGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LQQLDAVKCWSSLSFKSALASRT*QRLMVS Trigger: TGAAACCATTAACCTTTGCAAGGTTCTACTTGCCAA...TGCTGACTTGAAGGACAGAGAACTCCAGCATTTAACTGCATCTAGCTGCTGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CAA 90 bp | AAACTAAAACCAAACAGCAGTTCCTACCTACAGCAGCTAGATGCAGTTAAATGCCACTGGGAACCAGAATaGGCAAGTAGAACCTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: KLKPNSSSYLQQLDAVKCHWEPE*ASRTLQ Trigger: TTGCAAGGTTCTACTTGCCAATTCTGGTTCCCAGTG...GCATTTAACTGCATCTAGCTGCTGTAGGTAGGAACTGCTGTTTGGTTTTAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CAA 90 bp | CAAACCAGGCCACAAGGTACAAAACTAAAACCAAACAGCAGTTCCTACCTACAGTGTATATGGCTTTCTTaGCACTGGGAACCAGAATTG | + |
|
Preference number: 5 (lower is better) Translates to: QTRPQGTKLKPNSSSYLQCIWLS*HWEPEL Trigger: CAATTCTGGTTCCCAGTGCAAAGAAAGCCATATACA...CTGTAGGTAGGAACTGCTGTTTGGTTTTAGTTTTGTACCTTGTGGCCTGGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CAA 90 bp | CTACAGCAGCTAGATGCAGTTAAATGCTGGAGTTCTCTGTCCTTCAAGTCAGCAAATCCCTCTTCTACATaGAGCTTCATCCATTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LQQLDAVKCWSSLSFKSANPSST*SFIHFS Trigger: GGAAAAATGGATGAAGCTCAATGTAGAAGAGGGATT...TGCTGACTTGAAGGACAGAGAACTCCAGCATTTAACTGCATCTAGCTGCTGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS CCA 90 bp | TCTGAAATGTCATTCTTTAACAAACTGCTCAAGCTGAGGAAGTTATaGTGCAAAACCAGTAAGAAGAGAACAACAGCCAGGACCCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SEMSFFNKLLKLRKL*CKTSKKRTTARTQM Trigger: CATCTGGGTCCTGGCTGTTGTTCTCTTCTTACTGGTTTTGCACCATAACTTCCTCAGCTTGAGCAGTTTGTTAAAGAATGACATTTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CAA 90 bp | AGAAACTCAAGCCCTACAACTGTTACCTTCCCACATAGTGTGTCTTCCAGAGTTTCCATTCAGTCAAGTTaGCAACAAAAACTCCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RNSSPTTVTFPHSVSSRVSIQSS*QQKLQD Trigger: ATCCTGGAGTTTTTGTTGCAAACTTGACTGAATGGA...AACTCTGGAAGACACACTATGTGGGAAGGTAACAGTTGTAGGGCTTGAGTTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CAA 90 bp | AAACTAAAACCAAACAGCAGTTCCTACCTACAGCAGCTAGATGCAGTTAAATGCTGTATATGGCTTTCTTaGCACTGGGAACCAGAATTG | + |
|
Preference number: 5 (lower is better) Translates to: KLKPNSSSYLQQLDAVKCCIWLS*HWEPEL Trigger: CAATTCTGGTTCCCAGTGCAAAGAAAGCCATATACA...GCATTTAACTGCATCTAGCTGCTGTAGGTAGGAACTGCTGTTTGGTTTTAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CAA 90 bp | ATGCAGTTAAATGCTGGAGTTCTCTGTCCTTCAAGTCAGCAGTATAGTAAAGCATTGGCAAGTAGAACCTaGCAAAGGTTAATGGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: MQLNAGVLCPSSQQYSKALASRT*QRLMVS Trigger: TGAAACCATTAACCTTTGCAAGGTTCTACTTGCCAA...TGCTTTACTATACTGCTGACTTGAAGGACAGAGAACTCCAGCATTTAACTGCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CAA 90 bp | AAACTAAAACCAAACAGCAGTTCCTACCTACAGCAGCTAGATGCAGTTAAATGCTCCATTCAGTCAAGTTaGCAACAAAAACTCCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: KLKPNSSSYLQQLDAVKCSIQSS*QQKLQD Trigger: ATCCTGGAGTTTTTGTTGCAAACTTGACTGAATGGA...GCATTTAACTGCATCTAGCTGCTGTAGGTAGGAACTGCTGTTTGGTTTTAGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS GCA 90 bp | TTCCAACTGGTTAGTTACATTCTGTCTTTTCCATTCAGTCAAGTTTaGAACAAAAACTCCAGGATTAAAGGAACAGGTGCTGGCTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: FQLVSYILSFPFSQV*NKNSRIKGTGAGFH Trigger: ATGAAAGCCAGCACCTGTTCCTTTAATCCTGGAGTTTTTGTTGCAAACTTGACTGAATGGAAAAGACAGAATGTAACTAACCAGTTGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS-3UTR CAA 90 bp | TATTTACAAACCAGGCCACAAGGTACAAAACTAAAACCAAACAGCAGTTCCTACAATCCCTCTTCTACATaGAGCTTCATCCATTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: YLQTRPQGTKLKPNSSSYNPSST*SFIHFS Trigger: GGAAAAATGGATGAAGCTCAATGTAGAAGAGGGATT...GTAGGAACTGCTGTTTGGTTTTAGTTTTGTACCTTGTGGCCTGGTTTGTAAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS CAA 90 bp | ACCCAGCCTGTCTTCAGAGGCAGCAATAACCACGGGAATCTCCTCTaGCCTCTCACTCACTGGATGCTGATGAGCACTGGCGACAAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: TQPVFRGSNNHGNLL*PLTHWMLMSTGDKV Trigger: GACTTTGTCGCCAGTGCTCATCAGCATCCAGTGAGTGAGAGGCAAGAGGAGATTCCCGTGGTTATTGCTGCCTCTGAAGACAGGCTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS CCA 72 bp | CCTCTTGCCTCTCACTCACTGGATGCTGATGAGCACTaGCGACAAAGTCTATGGGCTGAAGCCCCACAATTC | + |
|
Preference number: 6 (lower is better) Translates to: PLASHSLDADEH*RQSLWAEAPQF Trigger: GAATTGTGGGGCTTCAGCCCATAGACTTTGTCGCCAGTGCTCATCAGCATCCAGTGAGTGAGAGGCAAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS CCA 72 bp | TCACATTGGAGCGCGTGTTTTGATGAACGCTGTTTATaGCTGCAATGGTCCCACCCAGCCTGTCTTCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SHWSACFDERCL*LQWSHPACLQR Trigger: CCTCTGAAGACAGGCTGGGTGGGACCATTGCAGCCATAAACAGCGTTCATCAAAACACGCGCTCCAATGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS CCA 72 bp | AATAACCACGGGAATCTCCTCTTGCCTCTCACTCACTaGATGCTGATGAGCACTGGCGACAAAGTCTATGGG | + |
|
Preference number: 6 (lower is better) Translates to: NNHGNLLLPLTH*MLMSTGDKVYG Trigger: CCCATAGACTTTGTCGCCAGTGCTCATCAGCATCCAGTGAGTGAGAGGCAAGAGGAGATTCCCGTGGTTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS CCA 72 bp | TCACTGGATGCTGATGAGCACTGGCGACAAAGTCTATaGGCTGAAGCCCCACAATTCCCGAATCTGAAATGT | + |
|
Preference number: 6 (lower is better) Translates to: SLDADEHWRQSL*AEAPQFPNLKC Trigger: ACATTTCAGATTCGGGAATTGTGGGGCTTCAGCCCATAGACTTTGTCGCCAGTGCTCATCAGCATCCAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS CAA 90 bp | GCTGTTGAATGTAACAATGTAAAACATCACATTGGAGCGCGTGTTTaGATGAACGCTGTTTATGGCTGCAATGGTCCCACCCAGCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: AVECNNVKHHIGARV*MNAVYGCNGPTQPV Trigger: GACAGGCTGGGTGGGACCATTGCAGCCATAAACAGCGTTCATCAAAACACGCGCTCCAATGTGATGTTTTACATTGTTACATTCAACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS CAA 72 bp | TCTTTGCACTGGGAACCAGAATTGGCAAGTAGAACCTaGCAAAGGTTAATGGTTTCATGGACTCCCCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SLHWEPELASRT*QRLMVSWTPPG Trigger: ACCAGGGGGAGTCCATGAAACCATTAACCTTTGCAAGGTTCTACTTGCCAATTCTGGTTCCCAGTGCAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS GCA 72 bp | CAAGGAACCACTGTTAAGCCAGGACCGGAGATGGTCTaGTGTGCTGTTGAATGTAACAATGTAAAACATCAC | + |
|
Preference number: 6 (lower is better) Translates to: QGTTVKPGPEMV*CAVECNNVKHH Trigger: GTGATGTTTTACATTGTTACATTCAACAGCACAGCAGACCATCTCCGGTCCTGGCTTAACAGTGGTTCCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS CCA 72 bp | AACCTTGCAAAGGTTAATGGTTTCATGGACTCCCCCTaGTCAGGATCCTGCTTTACTTTCCCTTCCAAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: NLAKVNGFMDSP*SGSCFTFPSKS Trigger: ACTTTTGGAAGGGAAAGTAAAGCAGGATCCTGACCAGGGGGAGTCCATGAAACCATTAACCTTTGCAAGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS CAA 72 bp | GAAAACGCAGCAGCATGTCCTGGCTTCAGTGGTGTATaGTACAAGGCAAGTATGTCACCTTGTACAATGACA | + |
|
Preference number: 6 (lower is better) Translates to: ENAAACPGFSGV*YKASMSPCTMT Trigger: TGTCATTGTACAAGGTGACATACTTGCCTTGTACAATACACCACTGAAGCCAGGACATGCTGCTGCGTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS CAA 90 bp | CAATCTTCTGAAAACGCAGCAGCATGTCCTGGCTTCAGTGGTGTATaGTACAAGGCAAGTATGTCACCTTGTACAATGACATCATCATCC | + |
|
Preference number: 6 (lower is better) Translates to: QSSENAAACPGFSGV*YKASMSPCTMTSSS Trigger: GGATGATGATGTCATTGTACAAGGTGACATACTTGCCTTGTACAATACACCACTGAAGCCAGGACATGCTGCTGCGTTTTCAGAAGATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS CAA 72 bp | TGTAACAATGTAAAACATCACATTGGAGCGCGTGTTTaGATGAACGCTGTTTATGGCTGCAATGGTCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: CNNVKHHIGARV*MNAVYGCNGPT Trigger: GGTGGGACCATTGCAGCCATAAACAGCGTTCATCAAAACACGCGCTCCAATGTGATGTTTTACATTGTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS CAA 90 bp | CATCATCATCCATGTATATGGCTTTCTTTGCACTGGGAACCAGAATaGGCAAGTAGAACCTTGCAAAGGTTAATGGTTTCATGGACTCCC | + |
|
Preference number: 6 (lower is better) Translates to: HHHPCIWLSLHWEPE*ASRTLQRLMVSWTP Trigger: GGGAGTCCATGAAACCATTAACCTTTGCAAGGTTCTACTTGCCAATTCTGGTTCCCAGTGCAAAGAAAGCCATATACATGGATGATGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS GCA 72 bp | GTTAATGGTTTCATGGACTCCCCCTGGTCAGGATCCTaGTTTACTTTCCCTTCCAAAAGTTTAGTGTCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: VNGFMDSPWSGS*FTFPSKSLVSK Trigger: TTTTGACACTAAACTTTTGGAAGGGAAAGTAAAGCAGGATCCTGACCAGGGGGAGTCCATGAAACCATTAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS CAA 90 bp | GTGATGCTGCCTGCCAGAGTTCTGCTGTATAATCCCTCTTCTACATaGAGCTTCATCCATTTTTCCAACTGGTTAGTTACATTCTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: VMLPARVLLYNPSST*SFIHFSNWLVTFCL Trigger: AAGACAGAATGTAACTAACCAGTTGGAAAAATGGATGAAGCTCAATGTAGAAGAGGGATTATACAGCAGAACTCTGGCAGGCAGCATCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS CCA 72 bp | TCATTCTTTAACAAACTGCTCAAGCTGAGGAAGTTATaGTGCAAAACCAGTAAGAAGAGAACAACAGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SFFNKLLKLRKL*CKTSKKRTTAR Trigger: CCTGGCTGTTGTTCTCTTCTTACTGGTTTTGCACCATAACTTCCTCAGCTTGAGCAGTTTGTTAAAGAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS CAA 72 bp | CCATGTATATGGCTTTCTTTGCACTGGGAACCAGAATaGGCAAGTAGAACCTTGCAAAGGTTAATGGTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PCIWLSLHWEPE*ASRTLQRLMVS Trigger: TGAAACCATTAACCTTTGCAAGGTTCTACTTGCCAATTCTGGTTCCCAGTGCAAAGAAAGCCATATACATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS CAA 72 bp | CCTGCCAGAGTTCTGCTGTATAATCCCTCTTCTACATaGAGCTTCATCCATTTTTCCAACTGGTTAGTTACA | + |
|
Preference number: 6 (lower is better) Translates to: PARVLLYNPSST*SFIHFSNWLVT Trigger: TGTAACTAACCAGTTGGAAAAATGGATGAAGCTCAATGTAGAAGAGGGATTATACAGCAGAACTCTGGCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS CCA 72 bp | CCCTCTTCTACATTGAGCTTCATCCATTTTTCCAACTaGTTAGTTACATTCTGTCTTTTCCATTCAGTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: PSSTLSFIHFSN*LVTFCLFHSVK Trigger: CTTGACTGAATGGAAAAGACAGAATGTAACTAACCAGTTGGAAAAATGGATGAAGCTCAATGTAGAAGAGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS CAA 72 bp | CTTCAGTGGTGTATTGTACAAGGCAAGTATGTCACCTaGTACAATGACATCATCATCCATGTATATGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LQWCIVQGKYVT*YNDIIIHVYGF Trigger: AAAGCCATATACATGGATGATGATGTCATTGTACAAGGTGACATACTTGCCTTGTACAATACACCACTGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS GCA 72 bp | GTTAGTTACATTCTGTCTTTTCCATTCAGTCAAGTTTaGAACAAAAACTCCAGGATTAAAGGAACAGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: VSYILSFPFSQV*NKNSRIKGTGA Trigger: AGCACCTGTTCCTTTAATCCTGGAGTTTTTGTTGCAAACTTGACTGAATGGAAAAGACAGAATGTAACTAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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| CDS TCA 72 bp | TTATGTTTGAGGTATCCATATGTCTTCGGATTAAACTaGATTTTCCTGTTGGGTCTGGAATATACCACTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LCLRYPYVFGLN*IFLLGLEYTTF Trigger: AAAAGTGGTATATTCCAGACCCAACAGGAAAATTCAGTTTAATCCGAAGACATATGGATACCTCAAACATAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022476.9 ENSMUST00000168584.9 |
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