Pregenerated sensors for GLT6D1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036401Ensembl transcript IDs: ENSMUST00000038010.5
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | ATACTATATGTTATTGGGCCTCTGAAATGTGGGTTTTTAACAAGACAGTCTGTGGGCCCTGCTGTGGTTTaGTCTGCAGTCCAACAGCAC | + |
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Preference number: 2 (lower is better) Translates to: ILYVIGPLKCGFLTRQSVGPAVV*SAVQQH Trigger: GTGCTGTTGGACTGCAGAGCAAACCACAGCAGGGCC...CACAGACTGTCTTGTTAAAAACCCACATTTCAGAGGCCCAATAACATATAGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS-3UTR TCA 90 bp | TATTGGGCCTCTGAAATGTGGGTTTTTAACAAGACAGTCTGTGTCTCTGAGGCCGGGAATGTGGGCTACTaGTGTAGGTTTCCTCTCATA | + |
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Preference number: 4 (lower is better) Translates to: YWASEMWVFNKTVCVSEAGNVGY*CRFPLI Trigger: TATGAGAGGAAACCTACATCAGTAGCCCACATTCCC...GGCCTCAGAGACACAGACTGTCTTGTTAAAAACCCACATTTCAGAGGCCCAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS-3UTR GCA 90 bp | TATTGGGCCTCTGAAATGTGGGTTTTTAACAAGACAGTCTGTGTCTCTGAGGCCCCCACGGTGATGTTCTaGTTCCTGAAATATGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: YWASEMWVFNKTVCVSEAPTVMF*FLKYVS Trigger: GGAGACATATTTCAGGAAGCAGAACATCACCGTGGG...GGCCTCAGAGACACAGACTGTCTTGTTAAAAACCCACATTTCAGAGGCCCAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS-3UTR CCA 90 bp | TATTGGGCCTCTGAAATGTGGGTTTTTAACAAGACAGTCTGTGTCTCTGAGGCCAGAAGTTCCTCTTCCTaGTGGTTCCTGAAGTGGATC | + |
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Preference number: 4 (lower is better) Translates to: YWASEMWVFNKTVCVSEARSSSS*WFLKWI Trigger: GATCCACTTCAGGAACCACCAGGAAGAGGAACTTCT...GGCCTCAGAGACACAGACTGTCTTGTTAAAAACCCACATTTCAGAGGCCCAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS-3UTR GCA 90 bp | TATGTTATTGGGCCTCTGAAATGTGGGTTTTTAACAAGACAGTCTGTGTCTCTGGCTGAGCCACAGATGTaGTCAGAGTCTCTACCCCAA | + |
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Preference number: 4 (lower is better) Translates to: YVIGPLKCGFLTRQSVSLAEPQM*SESLPQ Trigger: TTGGGGTAGAGACTCTGAGCACATCTGTGGCTCAGC...CAGAGACACAGACTGTCTTGTTAAAAACCCACATTTCAGAGGCCCAATAACATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS-3UTR TCA 90 bp | TATTGGGCCTCTGAAATGTGGGTTTTTAACAAGACAGTCTGTGTCTCTGAGGCCGGTACTTATCCACCATaGTGTAGAAGATCACTCGAT | + |
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Preference number: 4 (lower is better) Translates to: YWASEMWVFNKTVCVSEAGTYPP*CRRSLD Trigger: ATCGAGTGATCTTCTACATCATGGTGGATAAGTACC...GGCCTCAGAGACACAGACTGTCTTGTTAAAAACCCACATTTCAGAGGCCCAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS-3UTR TCA 90 bp | TATGTTATTGGGCCTCTGAAATGTGGGTTTTTAACAAGACAGTCTGTGTCTCTGGCAAAGTCCAAGACCTaGAAGGGCACTCCACCTATA | + |
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Preference number: 4 (lower is better) Translates to: YVIGPLKCGFLTRQSVSLAKSKT*KGTPPI Trigger: TATAGGTGGAGTGCCCTTTCAGGTCTTGGACTTTGC...CAGAGACACAGACTGTCTTGTTAAAAACCCACATTTCAGAGGCCCAATAACATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS-3UTR TCA 90 bp | ACTATATGTTATTGGGCCTCTGAAATGTGGGTTTTTAACAAGACAGTCTGTGTCCCAGGTACTTGTCAGTaGGACTGCCAACAGCAAACA | + |
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Preference number: 4 (lower is better) Translates to: TICYWASEMWVFNKTVCVPGTCQ*DCQQQT Trigger: TGTTTGCTGTTGGCAGTCTCACTGACAAGTACCTGG...GACACAGACTGTCTTGTTAAAAACCCACATTTCAGAGGCCCAATAACATATAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS-3UTR TCA 90 bp | ACTATATGTTATTGGGCCTCTGAAATGTGGGTTTTTAACAAGACAGTCTGTGTCCTCGATAGCCAGGCATaGAGAACTTGCTGGCTGATT | + |
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Preference number: 4 (lower is better) Translates to: TICYWASEMWVFNKTVCVLDSQA*RTCWLI Trigger: AATCAGCCAGCAAGTTCTTCATGCCTGGCTATCGAG...GACACAGACTGTCTTGTTAAAAACCCACATTTCAGAGGCCCAATAACATATAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS-3UTR TCA 90 bp | ACTATATGTTATTGGGCCTCTGAAATGTGGGTTTTTAACAAGACAGTCTGTGTCGGTGATGAGCAATCTTaGCAAACCACACATGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: TICYWASEMWVFNKTVCVGDEQS*QTTHAE Trigger: CTCGGCATGTGTGGTTTGTCAAGATTGCTCATCACC...GACACAGACTGTCTTGTTAAAAACCCACATTTCAGAGGCCCAATAACATATAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS-3UTR GCA 90 bp | ATACTATATGTTATTGGGCCTCTGAAATGTGGGTTTTTAACAAGACAGTCTGTGCCTGAAGTGGATCTTTaGCAGCAGCAGCAGGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: ILYVIGPLKCGFLTRQSVPEVDL*QQQQEK Trigger: CTTTTCCTGCTGCTGCTGGCAAAGATCCACTTCAGG...CACAGACTGTCTTGTTAAAAACCCACATTTCAGAGGCCCAATAACATATAGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS-3UTR TCA 90 bp | CTATATGTTATTGGGCCTCTGAAATGTGGGTTTTTAACAAGACAGTCTGTGTCTAATCCACTTCATATCTaGTGTGATCCCGGATGTGCT | + |
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Preference number: 4 (lower is better) Translates to: LYVIGPLKCGFLTRQSVSNPLHI*CDPGCA Trigger: AGCACATCCGGGATCACATCAGATATGAAGTGGATT...AGACACAGACTGTCTTGTTAAAAACCCACATTTCAGAGGCCCAATAACATATAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS-3UTR CCA 90 bp | TATGTTATTGGGCCTCTGAAATGTGGGTTTTTAACAAGACAGTCTGTGTCTCTGACCCCAAACTCACTTTaGAAGACCATGTTGATGTTC | + |
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Preference number: 4 (lower is better) Translates to: YVIGPLKCGFLTRQSVSLTPNSL*KTMLMF Trigger: GAACATCAACATGGTCTTCCAAAGTGAGTTTGGGGT...CAGAGACACAGACTGTCTTGTTAAAAACCCACATTTCAGAGGCCCAATAACATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS-3UTR CCA 90 bp | ACTATATGTTATTGGGCCTCTGAAATGTGGGTTTTTAACAAGACAGTCTGTGTCAGTCCAAAGGGAATGTaGGCTACTGATGTAGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: TICYWASEMWVFNKTVCVSPKGM*ATDVGF Trigger: GAAACCTACATCAGTAGCCCACATTCCCTTTGGACT...GACACAGACTGTCTTGTTAAAAACCCACATTTCAGAGGCCCAATAACATATAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS-3UTR GCA 90 bp | ACTATATGTTATTGGGCCTCTGAAATGTGGGTTTTTAACAAGACAGTCTGTGTCTCCATTTCTTGTAGCTaGAGGTACTTATCCACCATG | + |
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Preference number: 4 (lower is better) Translates to: TICYWASEMWVFNKTVCVSISCS*RYLSTM Trigger: CATGGTGGATAAGTACCTGCAGCTACAAGAAATGGA...GACACAGACTGTCTTGTTAAAAACCCACATTTCAGAGGCCCAATAACATATAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS CCA 90 bp | CGTCTCCTGGGGTTAAACCAGTCTGAGAGCAGAAGTTCCTCTTCCTaGTGGTTCCTGAAGTGGATCTTTGCCAGCAGCAGCAGGAAAAGG | + |
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Preference number: 5 (lower is better) Translates to: RLLGLNQSESRSSSS*WFLKWIFASSSRKR Trigger: CCTTTTCCTGCTGCTGCTGGCAAAGATCCACTTCAGGAACCACCAGGAAGAGGAACTTCTGCTCTCAGACTGGTTTAACCCCAGGAGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS-3UTR CAA 90 bp | TATTGGGCCTCTGAAATGTGGGTTTTTAACAAGACAGTCTGTGTCTCTGAGGCCACATGCCGAGGGAGGTaGAAGGTAGGGTCCCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: YWASEMWVFNKTVCVSEATCRGR*KVGSQL Trigger: CAGCTGGGACCCTACCTTCAACCTCCCTCGGCATGT...GGCCTCAGAGACACAGACTGTCTTGTTAAAAACCCACATTTCAGAGGCCCAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS TCA 90 bp | GATGTAGAAGATCACTCGATAGCCAGGCATGAAGAACTTGCTGGCTaGTTGCAAGAATGGGTCCAGGTACTTGTCAGTGAGACTGCCAAC | + |
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Preference number: 5 (lower is better) Translates to: DVEDHSIARHEELAG*LQEWVQVLVSETAN Trigger: GTTGGCAGTCTCACTGACAAGTACCTGGACCCATTCTTGCAATCAGCCAGCAAGTTCTTCATGCCTGGCTATCGAGTGATCTTCTACATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS-3UTR CAA 90 bp | ACTATATGTTATTGGGCCTCTGAAATGTGGGTTTTTAACAAGACAGTCTGTGTCCGCATGAGGTCAAAGTaGCTCCACCACCTCTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: TICYWASEMWVFNKTVCVRMRSK*LHHLSL Trigger: CAAGGAGAGGTGGTGGAGCAACTTTGACCTCATGCG...GACACAGACTGTCTTGTTAAAAACCCACATTTCAGAGGCCCAATAACATATAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS-3UTR CAA 90 bp | TATGTTATTGGGCCTCTGAAATGTGGGTTTTTAACAAGACAGTCTGTGTCTCTGAAGGATTGCAGAGGGTaGTGCTCCATTTCTTGTAGC | + |
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Preference number: 5 (lower is better) Translates to: YVIGPLKCGFLTRQSVSLKDCRG*CSISCS Trigger: GCTACAAGAAATGGAGCACAACCCTCTGCAATCCTT...CAGAGACACAGACTGTCTTGTTAAAAACCCACATTTCAGAGGCCCAATAACATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS-3UTR CAA 90 bp | TATGTTATTGGGCCTCTGAAATGTGGGTTTTTAACAAGACAGTCTGTGTCTCTGGCCTATTTTGAGTACTaGAAAGGATTGCAGAGGGTT | + |
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Preference number: 5 (lower is better) Translates to: YVIGPLKCGFLTRQSVSLAYFEY*KGLQRV Trigger: AACCCTCTGCAATCCTTTCAAGTACTCAAAATAGGC...CAGAGACACAGACTGTCTTGTTAAAAACCCACATTTCAGAGGCCCAATAACATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS-3UTR CAA 90 bp | TATGTTATTGGGCCTCTGAAATGTGGGTTTTTAACAAGACAGTCTGTGTCTCTGTACCCCAAACTCACTTaGGAAGACCATGTTGATGTT | + |
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Preference number: 5 (lower is better) Translates to: YVIGPLKCGFLTRQSVSLYPKLT*EDHVDV Trigger: AACATCAACATGGTCTTCCAAAGTGAGTTTGGGGTA...CAGAGACACAGACTGTCTTGTTAAAAACCCACATTTCAGAGGCCCAATAACATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS-3UTR CAA 90 bp | ATACTATATGTTATTGGGCCTCTGAAATGTGGGTTTTTAACAAGACAGTCTGTGCTTTGGAAGACCATGTaGATGTTCATGCTGAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: ILYVIGPLKCGFLTRQSVLWKTM*MFMLKR Trigger: CCTCTTCAGCATGAACATCAACATGGTCTTCCAAAG...CACAGACTGTCTTGTTAAAAACCCACATTTCAGAGGCCCAATAACATATAGTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS-3UTR CAA 90 bp | ATACTATATGTTATTGGGCCTCTGAAATGTGGGTTTTTAACAAGACAGTCTGTGAACACCTTTCAAGTATaGCTGAGCAAAGTCCAAGAC | + |
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Preference number: 5 (lower is better) Translates to: ILYVIGPLKCGFLTRQSVNTFQV*LSKVQD Trigger: GTCTTGGACTTTGCTCAGCAATACTTGAAAGGTGTT...CACAGACTGTCTTGTTAAAAACCCACATTTCAGAGGCCCAATAACATATAGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS TCA 72 bp | GATGACATCCAGGCGTCTCCTGGGGTTAAACCAGTCTaGGAGCAGAAGTTCCTCTTCCTGGTGGTTCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: DDIQASPGVKPV*EQKFLFLVVPE Trigger: TTCAGGAACCACCAGGAAGAGGAACTTCTGCTCTCAGACTGGTTTAACCCCAGGAGACGCCTGGATGTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS TCA 72 bp | TGGCTGATTGCAAGAATGGGTCCAGGTACTTGTCAGTaGGACTGCCAACAGCAAACACAGCCAAACCCACGG | + |
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Preference number: 6 (lower is better) Translates to: WLIARMGPGTCQ*DCQQQTQPNPR Trigger: CCGTGGGTTTGGCTGTGTTTGCTGTTGGCAGTCTCACTGACAAGTACCTGGACCCATTCTTGCAATCAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS CCA 72 bp | GAGAGCAGAAGTTCCTCTTCCTGGTGGTTCCTGAAGTaGATCTTTGCCAGCAGCAGCAGGAAAAGGCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: ESRSSSSWWFLK*IFASSSRKRQK Trigger: TTTCTGCCTTTTCCTGCTGCTGCTGGCAAAGATCCACTTCAGGAACCACCAGGAAGAGGAACTTCTGCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS TCA 72 bp | GATCACTCGATAGCCAGGCATGAAGAACTTGCTGGCTaGTTGCAAGAATGGGTCCAGGTACTTGTCAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: DHSIARHEELAG*LQEWVQVLVSE Trigger: CTCACTGACAAGTACCTGGACCCATTCTTGCAATCAGCCAGCAAGTTCTTCATGCCTGGCTATCGAGTGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS TCA 72 bp | GGTCAAAGTTGCTCCACCACCTCTCCTTGCCTATTTTaGGTACTTGAAAGGATTGCAGAGGGTTGTGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: GQSCSTTSPCLF*VLERIAEGCAP Trigger: TGGAGCACAACCCTCTGCAATCCTTTCAAGTACTCAAAATAGGCAAGGAGAGGTGGTGGAGCAACTTTGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS GCA 72 bp | CCAACAGCAAACACAGCCAAACCCACGGTGATGTTCTaGTTCCTGAAATATGTCTCCAGGACCTTTCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: PTANTAKPTVMF*FLKYVSRTFLS Trigger: TGACAGAAAGGTCCTGGAGACATATTTCAGGAAGCAGAACATCACCGTGGGTTTGGCTGTGTTTGCTGTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS CAA 72 bp | TGCTCAGACAAGATTTTCATGCGCATGAGGTCAAAGTaGCTCCACCACCTCTCCTTGCCTATTTTGAGTACT | + |
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Preference number: 6 (lower is better) Translates to: CSDKIFMRMRSK*LHHLSLPILST Trigger: AGTACTCAAAATAGGCAAGGAGAGGTGGTGGAGCAACTTTGACCTCATGCGCATGAAAATCTTGTCTGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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| CDS TCA 72 bp | TTCATGCTGAAGAGGAAATCCACTTCATATCTGATGTaGTCCCGGATGTGCTCAGACAAGATTTTCATGCGC | + |
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Preference number: 6 (lower is better) Translates to: FMLKRKSTSYLM*SRMCSDKIFMR Trigger: GCGCATGAAAATCTTGTCTGAGCACATCCGGGATCACATCAGATATGAAGTGGATTTCCTCTTCAGCATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038010.5 |
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