Pregenerated sensors for GLT28D2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031286Ensembl transcript IDs: ENSMUST00000033643.6
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATTGATAATCAGAACTGGAGGAAGGAAAGCATGAACTGTTTACACTaGACCTGCCCTGGCTACACAAAAGAGGGACAGGGTAAAGTGAGT | + |
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Preference number: 1 (lower is better) Translates to: IDNQNWRKESMNCLH*TCPGYTKEGQGKVS Trigger: ACTCACTTTACCCTGTCCCTCTTTTGTGTAGCCAGGGCAGGTTCAGTGTAAACAGTTCATGCTTTCCTTCCTCCAGTTCTGATTATCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| 3UTR TCA 90 bp | AAAGCTAGGAGTAAATTGATAATCAGAACTGGAGGAAGGAAAGCATaGACTGTTTACACTGAACCTGCCCTGGCTACACAAAAGAGGGAC | + |
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Preference number: 1 (lower is better) Translates to: KARSKLIIRTGGRKA*TVYTEPALATQKRD Trigger: GTCCCTCTTTTGTGTAGCCAGGGCAGGTTCAGTGTAAACAGTTCATGCTTTCCTTCCTCCAGTTCTGATTATCAATTTACTCCTAGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| 3UTR-3UTR GCA 90 bp | GCATTTTACCTACCTATCTGCATGCACTCATATGAATGTAGTAGGCATGTGTCCGTTTTAAATACACACTaGCATGCCCGACTAACATTT | + |
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Preference number: 2 (lower is better) Translates to: AFYLPICMHSYECSRHVSVLNTH*HARLTF Trigger: AAATGTTAGTCGGGCATGGCAGTGTGTATTTAAAAC...GGACACATGCCTACTACATTCATATGAGTGCATGCAGATAGGTAGGTAAAATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| 3UTR-3UTR CCA 90 bp | GACAAACCTGAAGGCTATGTTTTCAAAGTTAGGACTCGCTACATATTCCAAGTTGGATCTAGACCCAGCTaGAATGTTTATGCTACAAAA | + |
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Preference number: 2 (lower is better) Translates to: DKPEGYVFKVRTRYIFQVGSRPS*NVYATK Trigger: TTTTGTAGCATAAACATTCCAGCTGGGTCTAGATCC...AACTTGGAATATGTAGCGAGTCCTAACTTTGAAAACATAGCCTTCAGGTTTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| 3UTR-3UTR CAA 90 bp | TACAAAGCAGCGTGTACAGCAACTCGGCATGAACAGAGGGCAACGGGAATGTTGAAGACCAGAATGGCCTaGAACTCACAGAGACAGCAC | + |
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Preference number: 3 (lower is better) Translates to: YKAACTATRHEQRATGMLKTRMA*NSQRQH Trigger: GTGCTGTCTCTGTGAGTTCAAGGCCATTCTGGTCTT...CAACATTCCCGTTGCCCTCTGTTCATGCCGAGTTGCTGTACACGCTGCTTTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| 3UTR TCA 72 bp | CAGAACTGGAGGAAGGAAAGCATGAACTGTTTACACTaGACCTGCCCTGGCTACACAAAAGAGGGACAGGGT | + |
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Preference number: 3 (lower is better) Translates to: QNWRKESMNCLH*TCPGYTKEGQG Trigger: ACCCTGTCCCTCTTTTGTGTAGCCAGGGCAGGTTCAGTGTAAACAGTTCATGCTTTCCTTCCTCCAGTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| 3UTR-3UTR CAA 90 bp | GCATTTTACCTACCTATCTGCATGCACTCATATGAATGTAGTAGGCATGTGTCCCTTTGTGGTTTGGGTTaGGTTGTAGGAGACAGGGTT | + |
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Preference number: 3 (lower is better) Translates to: AFYLPICMHSYECSRHVSLCGLG*VVGDRV Trigger: AACCCTGTCTCCTACAACCAAACCCAAACCACAAAG...GGACACATGCCTACTACATTCATATGAGTGCATGCAGATAGGTAGGTAAAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| CDS-3UTR CCA 90 bp | AGAGACAGCACCTGCTTCTGGCTCCCAAGGGCTAGAATTAAAGGCATGCACCACCACAACTACCACAAGTaGTTTGCCTTTCTCCAGACT | + |
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Preference number: 4 (lower is better) Translates to: RDSTCFWLPRARIKGMHHHNYHK*FAFLQT Trigger: AGTCTGGAGAAAGGCAAACCACTTGTGGTAGTTGTG...GTGGTGCATGCCTTTAATTCTAGCCCTTGGGAGCCAGAAGCAGGTGCTGTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| 3UTR CAA 72 bp | ACAGCAACTCGGCATGAACAGAGGGCAACGGGAATGTaGCTGTTCTCACGTAAACGCCAAATAGACCATCCA | + |
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Preference number: 4 (lower is better) Translates to: TATRHEQRATGM*LFSRKRQIDHP Trigger: TGGATGGTCTATTTGGCGTTTACGTGAGAACAGCAACATTCCCGTTGCCCTCTGTTCATGCCGAGTTGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| CDS-3UTR GCA 90 bp | ACTAGGCTGCTTAGTCCAGTGTCTTCCAGGGATTCCGTCTACATCTACCAATATGCTCAGGCACCACAGTaGCTCTACCAATTTGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: TRLLSPVSSRDSVYIYQYAQAPQ*LYQFGG Trigger: TCCTCCAAATTGGTAGAGGCACTGTGGTGCCTGAGC...ATATTGGTAGATGTAGACGGAATCCCTGGAAGACACTGGACTAAGCAGCCTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| CDS-3UTR TCA 90 bp | ACTAGGCTGCTTAGTCCAGTGTCTTCCAGGGATTCCGTCTACATCTACCAATATACAAGGTCGGCTTGCTaGAGGTCTTCTTTCAAAGAG | + |
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Preference number: 4 (lower is better) Translates to: TRLLSPVSSRDSVYIYQYTRSAC*RSSFKE Trigger: CTCTTTGAAAGAAGACCTTCAGCAAGCCGACCTTGT...ATATTGGTAGATGTAGACGGAATCCCTGGAAGACACTGGACTAAGCAGCCTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| CDS-3UTR GCA 90 bp | ACTAGGCTGCTTAGTCCAGTGTCTTCCAGGGATTCCGTCTACATCTACCAATATACAGCTCAGGAAGCATaGTGCAGGTACAGTAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: TRLLSPVSSRDSVYIYQYTAQEA*CRYSRR Trigger: TCTTCTACTGTACCTGCAGCATGCTTCCTGAGCTGT...ATATTGGTAGATGTAGACGGAATCCCTGGAAGACACTGGACTAAGCAGCCTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| CDS-3UTR TCA 90 bp | GCATTTTACCTACCTATCTGCATGCACTCATATGAATGTAGTAGGCATGTGTCCAGATTCTTGAGGATCTaGACGCTATCGTGGGCAACC | + |
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Preference number: 4 (lower is better) Translates to: AFYLPICMHSYECSRHVSRFLRI*TLSWAT Trigger: GGTTGCCCACGATAGCGTTCAGATCCTCAAGAATCT...GGACACATGCCTACTACATTCATATGAGTGCATGCAGATAGGTAGGTAAAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| CDS-3UTR GCA 90 bp | GCATTTTACCTACCTATCTGCATGCACTCATATGAATGTAGTAGGCATGTGTCCGCTCAGGAAGCATGCTaGAGGTACAGTAGAAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: AFYLPICMHSYECSRHVSAQEAC*RYSRRD Trigger: ATCTCTTCTACTGTACCTGCAGCATGCTTCCTGAGC...GGACACATGCCTACTACATTCATATGAGTGCATGCAGATAGGTAGGTAAAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| CDS-3UTR CCA 90 bp | ACATGTCATCAACTTATTTCTGATTTAATCATATTCCACGAACTGGACTTAGGGCTTCCTGCACCTGCATaGCTAATGACAAGGTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: TCHQLISDLIIFHELDLGLPAPA*LMTRSA Trigger: AGCCGACCTTGTCATTAGCCATGCAGGTGCAGGAAG...CCCTAAGTCCAGTTCGTGGAATATGATTAAATCAGAAATAAGTTGATGACATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| CDS-3UTR GCA 90 bp | AACCTCAAACATTTACTAAAATTAGGATCTAGACCCAGCTGGAATGTTTATGCTCTCCAAACAGCTTCCTaGACCTGCATGGCTAATGAC | + |
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Preference number: 4 (lower is better) Translates to: NLKHLLKLGSRPSWNVYALQTAS*TCMAND Trigger: GTCATTAGCCATGCAGGTGCAGGAAGCTGTTTGGAG...AGCATAAACATTCCAGCTGGGTCTAGATCCTAATTTTAGTAAATGTTTGAGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| CDS-3UTR GCA 90 bp | GACAAACCTGAAGGCTATGTTTTCAAAGTTAGGACTCGCTACATATTCCAAGTTAGATGGCCTTCTTTGTaGAACTGCTTTGCCAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: DKPEGYVFKVRTRYIFQVRWPSL*NCFASS Trigger: TGAACTGGCAAAGCAGTTGCACAAAGAAGGCCATCT...AACTTGGAATATGTAGCGAGTCCTAACTTTGAAAACATAGCCTTCAGGTTTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| CDS-3UTR TCA 90 bp | AACCTCAAACATTTACTAAAATTAGGATCTAGACCCAGCTGGAATGTTTATGCTAACATCCAGAGTGAATaGCTCAGTACTGAATGGCTC | + |
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Preference number: 4 (lower is better) Translates to: NLKHLLKLGSRPSWNVYANIQSE*LSTEWL Trigger: GAGCCATTCAGTACTGAGTCATTCACTCTGGATGTT...AGCATAAACATTCCAGCTGGGTCTAGATCCTAATTTTAGTAAATGTTTGAGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| CDS-3UTR CCA 90 bp | ACATGTCATCAACTTATTTCTGATTTAATCATATTCCACGAACTGGACTTAGGGTGCAGAAAATTTCTCTaGCTGTCCAGGAGGATAACA | + |
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Preference number: 4 (lower is better) Translates to: TCHQLISDLIIFHELDLGCRKFL*LSRRIT Trigger: TGTTATCCTCCTGGACAGCCAGAGAAATTTTCTGCA...CCCTAAGTCCAGTTCGTGGAATATGATTAAATCAGAAATAAGTTGATGACATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| CDS GCA 90 bp | TACCACAAGTGGTTTGCCTTTCTCCAGACTCTCCAAACAGCTTCCTaGACCTGCATGGCTAATGACAAGGTCGGCTTGCTGAAGGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: YHKWFAFLQTLQTAS*TCMANDKVGLLKVF Trigger: GAAGACCTTCAGCAAGCCGACCTTGTCATTAGCCATGCAGGTGCAGGAAGCTGTTTGGAGAGTCTGGAGAAAGGCAAACCACTTGTGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| CDS-3UTR CAA 90 bp | TTTACCTACCTATCTGCATGCACTCATATGAATGTAGTAGGCATGTGTCCTGTGACTACCACAAGTGGTTaGCCTTTCTCCAGACTCTCC | + |
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Preference number: 5 (lower is better) Translates to: FTYLSACTHMNVVGMCPVTTTSG*PFSRLS Trigger: GGAGAGTCTGGAGAAAGGCAAACCACTTGTGGTAGT...CACAGGACACATGCCTACTACATTCATATGAGTGCATGCAGATAGGTAGGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| CDS TCA 90 bp | GTCTTCTTTCAAAGAGTCCTTATATCTGTAAACATCCAGAGTGAATaGCTCAGTACTGAATGGCTCAGGCACCACAGTGCCTCTACCAAT | + |
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Preference number: 5 (lower is better) Translates to: VFFQRVLISVNIQSE*LSTEWLRHHSASTN Trigger: ATTGGTAGAGGCACTGTGGTGCCTGAGCCATTCAGTACTGAGTCATTCACTCTGGATGTTTACAGATATAAGGACTCTTTGAAAGAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| CDS-3UTR CAA 90 bp | GCCATGCTAGCTAACTTCCCTTATCCCTGTCCCCATCCTTTAGATCTTATATTTAGTGCCTCTACCAATTaGGAGGACAAGTTGGTTGTA | + |
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Preference number: 5 (lower is better) Translates to: AMLANFPYPCPHPLDLIFSASTN*EDKLVV Trigger: TACAACCAACTTGTCCTCCAAATTGGTAGAGGCACT...AAATATAAGATCTAAAGGATGGGGACAGGGATAAGGGAAGTTAGCTAGCATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| CDS-3UTR CAA 90 bp | ACATGTCATCAACTTATTTCTGATTTAATCATATTCCACGAACTGGACTTAGGGAAGAGATGGCCTTCTTaGTGCAACTGCTTTGCCAGT | + |
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Preference number: 5 (lower is better) Translates to: TCHQLISDLIIFHELDLGKRWPS*CNCFAS Trigger: ACTGGCAAAGCAGTTGCACAAAGAAGGCCATCTCTT...CCCTAAGTCCAGTTCGTGGAATATGATTAAATCAGAAATAAGTTGATGACATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| CDS-3UTR CAA 90 bp | CATTTACTAAAATTAGGATCTAGACCCAGCTGGAATGTTTATGCTACAAAATCCAATGACAAGGTCGGCTaGCTGAAGGTCTTCTTTCAA | + |
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Preference number: 5 (lower is better) Translates to: HLLKLGSRPSWNVYATKSNDKVG*LKVFFQ Trigger: TTGAAAGAAGACCTTCAGCAAGCCGACCTTGTCATT...GGATTTTGTAGCATAAACATTCCAGCTGGGTCTAGATCCTAATTTTAGTAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| CDS-3UTR CAA 90 bp | AACCTCAAACATTTACTAAAATTAGGATCTAGACCCAGCTGGAATGTTTATGCTATGTTGATAAATCCATaGACTGTAACAGCTCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: NLKHLLKLGSRPSWNVYAMLINP*TVTAQE Trigger: TTCCTGAGCTGTTACAGTCAATGGATTTATCAACAT...AGCATAAACATTCCAGCTGGGTCTAGATCCTAATTTTAGTAAATGTTTGAGGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| CDS TCA 72 bp | GGATCTGAACGCTATCGTGGGCAACCACTCGAGCGATaGGGTCGTCGAAACTGGTGGTCCCGACGGTCACAA | + |
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Preference number: 6 (lower is better) Translates to: GSERYRGQPLER*GRRNWWSRRSQ Trigger: TTGTGACCGTCGGGACCACCAGTTTCGACGACCTCATCGCTCGAGTGGTTGCCCACGATAGCGTTCAGATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| CDS CAA 90 bp | GAATGGCTCAGGCACCACAGTGCCTCTACCAATTTGGAGGACAAGTaGGTTGTAACCCAGATTCTTGAGGATCTGAACGCTATCGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: EWLRHHSASTNLEDK*VVTQILEDLNAIVG Trigger: GCCCACGATAGCGTTCAGATCCTCAAGAATCTGGGTTACAACCAACTTGTCCTCCAAATTGGTAGAGGCACTGTGGTGCCTGAGCCATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| CDS TCA 72 bp | CAATTTGGAGGACAAGTTGGTTGTAACCCAGATTCTTaGGGATCTGAACGCTATCGTGGGCAACCACTCGAG | + |
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Preference number: 6 (lower is better) Translates to: QFGGQVGCNPDS*GSERYRGQPLE Trigger: CTCGAGTGGTTGCCCACGATAGCGTTCAGATCCTCAAGAATCTGGGTTACAACCAACTTGTCCTCCAAATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| CDS CAA 72 bp | AGGCACCACAGTGCCTCTACCAATTTGGAGGACAAGTaGGTTGTAACCCAGATTCTTGAGGATCTGAACGCT | + |
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Preference number: 6 (lower is better) Translates to: RHHSASTNLEDK*VVTQILEDLNA Trigger: AGCGTTCAGATCCTCAAGAATCTGGGTTACAACCAACTTGTCCTCCAAATTGGTAGAGGCACTGTGGTGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| CDS CAA 72 bp | ACTGAATGGCTCAGGCACCACAGTGCCTCTACCAATTaGGAGGACAAGTTGGTTGTAACCCAGATTCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: TEWLRHHSASTN*EDKLVVTQILE Trigger: CTCAAGAATCTGGGTTACAACCAACTTGTCCTCCAAATTGGTAGAGGCACTGTGGTGCCTGAGCCATTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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| CDS CAA 90 bp | ATGCAGAAAATTTCTCTGGCTGTCCAGGAGGATAACATTTCAATGTaGATAAATCCATTGACTGTAACAGCTCAGGAAGCATGCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: MQKISLAVQEDNISM*INPLTVTAQEACCR Trigger: CCTGCAGCATGCTTCCTGAGCTGTTACAGTCAATGGATTTATCAACATTGAAATGTTATCCTCCTGGACAGCCAGAGAAATTTTCTGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033643.6 |
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