Pregenerated sensors for GLT1D1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049971Ensembl transcript IDs: ENSMUST00000118139.3
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAACCGTGATACCTGACCTCTACACACCTCTCCTGAGGTGGGTTTaGACTCTGGGCTCAGAGGAGCTGCTATGGAGATTCAGGCCTCGT | + |
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Preference number: 1 (lower is better) Translates to: TTVIPDLYTPLLRWV*TLGSEELLWRFRPR Trigger: ACGAGGCCTGAATCTCCATAGCAGCTCCTCTGAGCCCAGAGTTCAAACCCACCTCAGGAGAGGTGTGTAGAGGTCAGGTATCACGGTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR CCA 90 bp | TCCCCAAGGAGCATTTGCAGATGTAGCTTAGAGATGCTGGCACAGTaGTCAGGCAGTGATGTCATCCCTGGGCAAAGGAGAGGCAAGCAT | + |
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Preference number: 1 (lower is better) Translates to: SPRSICRCSLEMLAQ*SGSDVIPGQRRGKH Trigger: ATGCTTGCCTCTCCTTTGCCCAGGGATGACATCACTGCCTGACCACTGTGCCAGCATCTCTAAGCTACATCTGCAAATGCTCCTTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR CCA 90 bp | TGCTGCTGCTATGAAATGCAAAAGGCCCAGATGTGCCTTCTGAGTTaGAGCAAGTATGATATGGGTTCTGACTCCTCCTCCGTTCCCTCC | + |
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Preference number: 1 (lower is better) Translates to: CCCYEMQKAQMCLLS*SKYDMGSDSSSVPS Trigger: GGAGGGAACGGAGGAGGAGTCAGAACCCATATCATACTTGCTCCAACTCAGAAGGCACATCTGGGCCTTTTGCATTTCATAGCAGCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR-3UTR GCA 90 bp | GGTGGGTTTGAACTCTGGGCTCAGAGGAGCTGCTATGGAGATTCAGGCCTCGTGCGAGCAGTGAGGGATTaGTGCTGCCTCTGCTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: GGFELWAQRSCYGDSGLVRAVRD*CCLCWS Trigger: GCTCCAGCAGAGGCAGCAGCAATCCCTCACTGCTCG...CACGAGGCCTGAATCTCCATAGCAGCTCCTCTGAGCCCAGAGTTCAAACCCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR-3UTR TCA 90 bp | AGGATATGCCAGGTAGGGTCTGAGGGATGCTGGGAAAACCTGGAGGCCAGGTCTTCCTCCAAAGGCCCCTaGGATGCACCTCCATCTCCT | + |
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Preference number: 2 (lower is better) Translates to: RICQVGSEGCWENLEARSSSKGP*DAPPSP Trigger: AGGAGATGGAGGTGCATCTCAGGGGCCTTTGGAGGA...AGACCTGGCCTCCAGGTTTTCCCAGCATCCCTCAGACCCTACCTGGCATATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR-3UTR TCA 90 bp | TTCAGAGTTGGGGGCAGGATATGCCAGGTAGGGTCTGAGGGATGCTGGGAAAACCTCCTGAGGTGGGTTTaGACTCTGGGCTCAGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: FRVGGRICQVGSEGCWENLLRWV*TLGSEE Trigger: CTCCTCTGAGCCCAGAGTTCAAACCCACCTCAGGAG...GTTTTCCCAGCATCCCTCAGACCCTACCTGGCATATCCTGCCCCCAACTCTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR-3UTR GCA 90 bp | GGTGGGTTTGAACTCTGGGCTCAGAGGAGCTGCTATGGAGATTCAGGCCTCGTGCCTCCTCCTCCAAGCTaGTTACACAGGTGGCCATTG | + |
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Preference number: 2 (lower is better) Translates to: GGFELWAQRSCYGDSGLVPPPPS*LHRWPL Trigger: CAATGGCCACCTGTGTAAGCAGCTTGGAGGAGGAGG...CACGAGGCCTGAATCTCCATAGCAGCTCCTCTGAGCCCAGAGTTCAAACCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR-3UTR TCA 90 bp | AGGATATGCCAGGTAGGGTCTGAGGGATGCTGGGAAAACCTGGAGGCCAGGTCTGAACCTCCAAACTGTTaGGTCTGCAGAAACCGCTCC | + |
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Preference number: 2 (lower is better) Translates to: RICQVGSEGCWENLEARSEPPNC*VCRNRS Trigger: GGAGCGGTTTCTGCAGACTCAACAGTTTGGAGGTTC...AGACCTGGCCTCCAGGTTTTCCCAGCATCCCTCAGACCCTACCTGGCATATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR-3UTR GCA 90 bp | TGCCAGGTAGGGTCTGAGGGATGCTGGGAAAACCTGGAGGCCAGGTCTGCTTCATGCACCTCCATCTCCTaGACAGAGCTACAAACCCAT | + |
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Preference number: 2 (lower is better) Translates to: CQVGSEGCWENLEARSASCTSIS*TELQTH Trigger: ATGGGTTTGTAGCTCTGTGCAGGAGATGGAGGTGCA...TGAAGCAGACCTGGCCTCCAGGTTTTCCCAGCATCCCTCAGACCCTACCTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR-3UTR GCA 90 bp | TGCCAGGTAGGGTCTGAGGGATGCTGGGAAAACCTGGAGGCCAGGTCTGCTTCACAAAAGGCCCAGATGTaGCTTCTGAGTTGGAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: CQVGSEGCWENLEARSASQKAQM*LLSWSK Trigger: CTTGCTCCAACTCAGAAGGCACATCTGGGCCTTTTG...TGAAGCAGACCTGGCCTCCAGGTTTTCCCAGCATCCCTCAGACCCTACCTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR-3UTR CCA 90 bp | TTCAGAGTTGGGGGCAGGATATGCCAGGTAGGGTCTGAGGGATGCTGGGAAAACGGAAGAGACTTGGGGTaGGGTGGGGTTTGGATGTGT | + |
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Preference number: 2 (lower is better) Translates to: FRVGGRICQVGSEGCWENGRDLG*GGVWMC Trigger: ACACATCCAAACCCCACCCCACCCCAAGTCTCTTCC...GTTTTCCCAGCATCCCTCAGACCCTACCTGGCATATCCTGCCCCCAACTCTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR-3UTR TCA 90 bp | TTCAGAGTTGGGGGCAGGATATGCCAGGTAGGGTCTGAGGGATGCTGGGAAAACTCTACACACCTCTCCTaGGGTGGGTTTGAACTCTGG | + |
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Preference number: 2 (lower is better) Translates to: FRVGGRICQVGSEGCWENSTHLS*GGFELW Trigger: CCAGAGTTCAAACCCACCTCAGGAGAGGTGTGTAGA...GTTTTCCCAGCATCCCTCAGACCCTACCTGGCATATCCTGCCCCCAACTCTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR-3UTR TCA 90 bp | AACCTTCCTTCCCCAAGGAGCATTTGCAGATGTAGCTTAGAGATGCTGGCACAGCCCGAGCTGAGCACCTaGTGGTTGTTGGGACAGATG | + |
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Preference number: 2 (lower is better) Translates to: NLPSPRSICRCSLEMLAQPELST*WLLGQM Trigger: CATCTGTCCCAACAACCATCAGGTGCTCAGCTCGGG...CTGTGCCAGCATCTCTAAGCTACATCTGCAAATGCTCCTTGGGGAAGGAAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR-3UTR CCA 90 bp | AGATCCCATCGAAAGATACCCCCACTACCCAGATTGACTTCTCATACCCCAGTGCTGGGTCCCATCTTTTaGCATCTGCCCCGAGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: RSHRKIPPLPRLTSHTPVLGPIF*HLPRAE Trigger: CTCAGCTCGGGGCAGATGCCAAAAGATGGGACCCAG...CACTGGGGTATGAGAAGTCAATCTGGGTAGTGGGGGTATCTTTCGATGGGATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR-3UTR TCA 90 bp | CGCTGTTGTAGGGAGATCCCATCGAAAGATACCCCCACTACCCAGATTGACTTCCCAGCTCCACTCCATTaGCAATCCTGGCCTTTTTGG | + |
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Preference number: 2 (lower is better) Translates to: RCCREIPSKDTPTTQIDFPAPLH*QSWPFW Trigger: CCAAAAAGGCCAGGATTGTCAATGGAGTGGAGCTGG...GAAGTCAATCTGGGTAGTGGGGGTATCTTTCGATGGGATCTCCCTACAACAGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR-3UTR GCA 90 bp | CTACACACCTCTCCTGAGGTGGGTTTGAACTCTGGGCTCAGAGGAGCTGCTATGCTGGTTTACAAAGCTTaGTTCCTTCCAGCCTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: LHTSPEVGLNSGLRGAAMLVYKA*FLPACF Trigger: GAAGCAGGCTGGAAGGAAGCAAGCTTTGTAAACCAG...CATAGCAGCTCCTCTGAGCCCAGAGTTCAAACCCACCTCAGGAGAGGTGTGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR-3UTR GCA 90 bp | AGGATATGCCAGGTAGGGTCTGAGGGATGCTGGGAAAACCTGGAGGCCAGGTCTTCCCCAAGGAGCATTTaGAGATGTAGCTTAGAGATG | + |
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Preference number: 2 (lower is better) Translates to: RICQVGSEGCWENLEARSSPRSI*RCSLEM Trigger: CATCTCTAAGCTACATCTGCAAATGCTCCTTGGGGA...AGACCTGGCCTCCAGGTTTTCCCAGCATCCCTCAGACCCTACCTGGCATATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR-3UTR GCA 90 bp | GAGTCTGCAGAAACCGCTCCTCTTTATGTTCTTCAAGTGTCTGGTACGGAAAGGCAAAGGCCCCTGAGATaGACCTCCATCTCCTGCACA | + |
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Preference number: 2 (lower is better) Translates to: ESAETAPLYVLQVSGTERQRPLR*TSISCT Trigger: TGTGCAGGAGATGGAGGTGCATCTCAGGGGCCTTTG...CCTTTCCGTACCAGACACTTGAAGAACATAAAGAGGAGCGGTTTCTGCAGACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR-3UTR CCA 90 bp | GAGTCTGCAGAAACCGCTCCTCTTTATGTTCTTCAAGTGTCTGGTACGGAAAGGAGACTTGGGGTGGGGTaGGGTTTGGATGTGTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: ESAETAPLYVLQVSGTERRLGVG*GLDVFL Trigger: CAGGAACACATCCAAACCCCACCCCACCCCAAGTCT...CCTTTCCGTACCAGACACTTGAAGAACATAAAGAGGAGCGGTTTCTGCAGACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR-3UTR TCA 90 bp | CGCTGTTGTAGGGAGATCCCATCGAAAGATACCCCCACTACCCAGATTGACTTCTGTAAAAGCAGTCCTTaGAACAGTCCTCCAAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: RCCREIPSKDTPTTQIDFCKSSP*NSPPKA Trigger: GGCCTTTGGAGGACTGTTTCAAGGACTGCTTTTACA...GAAGTCAATCTGGGTAGTGGGGGTATCTTTCGATGGGATCTCCCTACAACAGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR-3UTR CCA 90 bp | GAGTCTGCAGAAACCGCTCCTCTTTATGTTCTTCAAGTGTCTGGTACGGAAAGGGGTGGGTTTGAACTCTaGGCTCAGAGGAGCTGCTAT | + |
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Preference number: 2 (lower is better) Translates to: ESAETAPLYVLQVSGTERGGFEL*AQRSCY Trigger: ATAGCAGCTCCTCTGAGCCCAGAGTTCAAACCCACC...CCTTTCCGTACCAGACACTTGAAGAACATAAAGAGGAGCGGTTTCTGCAGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR-3UTR TCA 90 bp | AGGATATGCCAGGTAGGGTCTGAGGGATGCTGGGAAAACCTGGAGGCCAGGTCTCCCATGATGGCTTGTTaGTCAAGATCATATCAAAAA | + |
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Preference number: 2 (lower is better) Translates to: RICQVGSEGCWENLEARSPMMAC*SRSYQK Trigger: TTTTTGATATGATCTTGATCAACAAGCCATCATGGG...AGACCTGGCCTCCAGGTTTTCCCAGCATCCCTCAGACCCTACCTGGCATATCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR-3UTR TCA 90 bp | CTGCAGAAACCGCTCCTCTTTATGTTCTTCAAGTGTCTGGTACGGAAAGGGAAAAAGCCCACTGATGACTaGTCTGTAAACACCTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LQKPLLFMFFKCLVRKGKKPTDD*SVNTSG Trigger: CCCAGAGGTGTTTACAGATCAGTCATCAGTGGGCTT...TTTCCCTTTCCGTACCAGACACTTGAAGAACATAAAGAGGAGCGGTTTCTGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR-3UTR TCA 90 bp | GAGTCTGCAGAAACCGCTCCTCTTTATGTTCTTCAAGTGTCTGGTACGGAAAGGTGCTTGCTGCTGCTATaGAATGCAAAAGGCCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: ESAETAPLYVLQVSGTERCLLLL*NAKGPD Trigger: ATCTGGGCCTTTTGCATTTCATAGCAGCAGCAAGCA...CCTTTCCGTACCAGACACTTGAAGAACATAAAGAGGAGCGGTTTCTGCAGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR-3UTR GCA 90 bp | CGCTGTTGTAGGGAGATCCCATCGAAAGATACCCCCACTACCCAGATTGACTTCAGATCATATCAAAAATaGTGCCAGCTCCACTCCATT | + |
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Preference number: 2 (lower is better) Translates to: RCCREIPSKDTPTTQIDFRSYQK*CQLHSI Trigger: AATGGAGTGGAGCTGGCAGCATTTTTGATATGATCT...GAAGTCAATCTGGGTAGTGGGGGTATCTTTCGATGGGATCTCCCTACAACAGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGAAACCGCTCCTCTTTATGTTCTTCAAGTGTCTGGTACGGAAAGGGAAAGGTCCCACCATTGTCTaGAGTCTTGTGACTCAATCA | + |
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Preference number: 2 (lower is better) Translates to: LQKPLLFMFFKCLVRKGKGPTIV*SLVTQS Trigger: TGATTGAGTCACAAGACTCCAGACAATGGTGGGACC...TTTCCCTTTCCGTACCAGACACTTGAAGAACATAAAGAGGAGCGGTTTCTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR-3UTR CCA 90 bp | GAGTCTGCAGAAACCGCTCCTCTTTATGTTCTTCAAGTGTCTGGTACGGAAAGGTCATCCCTGATGTTCTaGTTTACAAAGCTTGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: ESAETAPLYVLQVSGTERSSLMF*FTKLAS Trigger: GGAAGCAAGCTTTGTAAACCAGAACATCAGGGATGA...CCTTTCCGTACCAGACACTTGAAGAACATAAAGAGGAGCGGTTTCTGCAGACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR-3UTR CCA 90 bp | AACCTTCCTTCCCCAAGGAGCATTTGCAGATGTAGCTTAGAGATGCTGGCACAGCAATCCTGGCCTTTTTaGGTTTTGTTGCTTATAAAT | + |
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Preference number: 2 (lower is better) Translates to: NLPSPRSICRCSLEMLAQQSWPF*VLLLIN Trigger: ATTTATAAGCAACAAAACCCAAAAAGGCCAGGATTG...CTGTGCCAGCATCTCTAAGCTACATCTGCAAATGCTCCTTGGGGAAGGAAGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR-3UTR CAA 90 bp | GGAAAGTTCAGAGTTGGGGGCAGGATATGCCAGGTAGGGTCTGAGGGATGCTGGTCGAGCAGTGAGGGATaGCTGCTGCCTCTGCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: GKFRVGGRICQVGSEGCWSSSEG*LLPLLE Trigger: CTCCAGCAGAGGCAGCAGCAATCCCTCACTGCTCGA...CCAGCATCCCTCAGACCCTACCTGGCATATCCTGCCCCCAACTCTGAACTTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR TCA 72 bp | CTCAGTGCGCCTTGCAAATGCTTGAAGCTCGAGCAGTaGGGGATTGCTGCTGCCTCTGCTGGAGCCTACGTG | + |
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Preference number: 3 (lower is better) Translates to: LSAPCKCLKLEQ*GIAAASAGAYV Trigger: CACGTAGGCTCCAGCAGAGGCAGCAGCAATCCCTCACTGCTCGAGCTTCAAGCATTTGCAAGGCGCACTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR GCA 72 bp | GTTGGGGGCAGGATATGCCAGGTAGGGTCTGAGGGATaGTGGGAAAACCTGGAGGCCAGGTCTGCTTCAGTA | + |
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Preference number: 3 (lower is better) Translates to: VGGRICQVGSEG*WENLEARSASV Trigger: TACTGAAGCAGACCTGGCCTCCAGGTTTTCCCAGCATCCCTCAGACCCTACCTGGCATATCCTGCCCCCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR CCA 72 bp | GGGGGCAGGATATGCCAGGTAGGGTCTGAGGGATGCTaGGAAAACCTGGAGGCCAGGTCTGCTTCAGTATGT | + |
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Preference number: 3 (lower is better) Translates to: GGRICQVGSEGC*ENLEARSASVC Trigger: ACATACTGAAGCAGACCTGGCCTCCAGGTTTTCCCAGCATCCCTCAGACCCTACCTGGCATATCCTGCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR-3UTR CAA 90 bp | GGAAAGTTCAGAGTTGGGGGCAGGATATGCCAGGTAGGGTCTGAGGGATGCTGGCCCCCACTACCCAGATaGACTTCTCATACCCCAGTG | + |
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Preference number: 3 (lower is better) Translates to: GKFRVGGRICQVGSEGCWPPLPR*TSHTPV Trigger: CACTGGGGTATGAGAAGTCAATCTGGGTAGTGGGGG...CCAGCATCCCTCAGACCCTACCTGGCATATCCTGCCCCCAACTCTGAACTTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR TCA 72 bp | TCTTGTGCCCAGAGAGGTAAGACCCCCAGCTCAGGCTaGGGGCCAAGGAAATGGACACATTTCTCAGTGCGC | + |
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Preference number: 3 (lower is better) Translates to: SCAQRGKTPSSG*GPRKWTHFSVR Trigger: GCGCACTGAGAAATGTGTCCATTTCCTTGGCCCTCAGCCTGAGCTGGGGGTCTTACCTCTCTGGGCACAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR GCA 72 bp | CAAATGCTTGAAGCTCGAGCAGTGAGGGATTGCTGCTaGCTCTGCTGGAGCCTACGTGAAAGTGCCGGTGCT | + |
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Preference number: 3 (lower is better) Translates to: QMLEARAVRDCC*LCWSLRESAGA Trigger: AGCACCGGCACTTTCACGTAGGCTCCAGCAGAGGCAGCAGCAATCCCTCACTGCTCGAGCTTCAAGCATTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR GCA 72 bp | GCCTTGCAAATGCTTGAAGCTCGAGCAGTGAGGGATTaGTGCTGCCTCTGCTGGAGCCTACGTGAAAGTGCC | + |
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Preference number: 3 (lower is better) Translates to: ALQMLEARAVRD*CCLCWSLRESA Trigger: GGCACTTTCACGTAGGCTCCAGCAGAGGCAGCAGCAATCCCTCACTGCTCGAGCTTCAAGCATTTGCAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR GCA 72 bp | TTGCAAATGCTTGAAGCTCGAGCAGTGAGGGATTGCTaGTGCCTCTGCTGGAGCCTACGTGAAAGTGCCGGT | + |
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Preference number: 3 (lower is better) Translates to: LQMLEARAVRDC*CLCWSLRESAG Trigger: ACCGGCACTTTCACGTAGGCTCCAGCAGAGGCAGCAGCAATCCCTCACTGCTCGAGCTTCAAGCATTTGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR GCA 72 bp | GCAGTCCTTGAAACAGTCCTCCAAAGGCCCCTGAGATaGACCTCCATCTCCTGCACAGAGCTACAAACCCAT | + |
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Preference number: 3 (lower is better) Translates to: AVLETVLQRPLR*TSISCTELQTH Trigger: ATGGGTTTGTAGCTCTGTGCAGGAGATGGAGGTGCATCTCAGGGGCCTTTGGAGGACTGTTTCAAGGACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR GCA 72 bp | CAGGCTGAGGGCCAAGGAAATGGACACATTTCTCAGTaGGCCTTGCAAATGCTTGAAGCTCGAGCAGTGAGG | + |
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Preference number: 3 (lower is better) Translates to: QAEGQGNGHISQ*ALQMLEARAVR Trigger: CCTCACTGCTCGAGCTTCAAGCATTTGCAAGGCGCACTGAGAAATGTGTCCATTTCCTTGGCCCTCAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR-3UTR CAA 90 bp | GAGTCTGCAGAAACCGCTCCTCTTTATGTTCTTCAAGTGTCTGGTACGGAAAGGCTCCCAGCCTCCATCTaGAGAGCCAGACTCCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: ESAETAPLYVLQVSGTERLPASI*RARLPV Trigger: CACAGGGAGTCTGGCTCTCAAGATGGAGGCTGGGAG...CCTTTCCGTACCAGACACTTGAAGAACATAAAGAGGAGCGGTTTCTGCAGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR TCA 72 bp | ATACCTGACCTCTACACACCTCTCCTGAGGTGGGTTTaGACTCTGGGCTCAGAGGAGCTGCTATGGAGATTC | + |
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Preference number: 3 (lower is better) Translates to: IPDLYTPLLRWV*TLGSEELLWRF Trigger: GAATCTCCATAGCAGCTCCTCTGAGCCCAGAGTTCAAACCCACCTCAGGAGAGGTGTGTAGAGGTCAGGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR CCA 72 bp | AGCATTTGCAGATGTAGCTTAGAGATGCTGGCACAGTaGTCAGGCAGTGATGTCATCCCTGGGCAAAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: SICRCSLEMLAQ*SGSDVIPGQRR Trigger: TCTCCTTTGCCCAGGGATGACATCACTGCCTGACCACTGTGCCAGCATCTCTAAGCTACATCTGCAAATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR-3UTR CAA 90 bp | GGTGGGTTTGAACTCTGGGCTCAGAGGAGCTGCTATGGAGATTCAGGCCTCGTGTGGCCTTTTTGGGTTTaGTTGCTTATAAATAAGCCT | + |
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Preference number: 3 (lower is better) Translates to: GGFELWAQRSCYGDSGLVWPFWV*LLINKP Trigger: AGGCTTATTTATAAGCAACAAAACCCAAAAAGGCCA...CACGAGGCCTGAATCTCCATAGCAGCTCCTCTGAGCCCAGAGTTCAAACCCACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR-3UTR CAA 90 bp | CCTGATGTTCTGGTTTACAAAGCTTGCTTCCTTCCAGCCTGCTTCTCTAAAAAGGCCAGCTCCACTCCATaGACAATCCTGGCCTTTTTG | + |
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Preference number: 3 (lower is better) Translates to: PDVLVYKACFLPACFSKKASSTP*TILAFL Trigger: CAAAAAGGCCAGGATTGTCAATGGAGTGGAGCTGGC...CTTTTTAGAGAAGCAGGCTGGAAGGAAGCAAGCTTTGTAAACCAGAACATCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR TCA 72 bp | GCACTTTCAGAAGTGAGCTATAAGTCCATCCAGAACTaGGCTGTAAGCACAGCAGAACTGTCTGCCAAACAG | + |
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Preference number: 3 (lower is better) Translates to: ALSEVSYKSIQN*AVSTAELSAKQ Trigger: CTGTTTGGCAGACAGTTCTGCTGTGCTTACAGCTCAGTTCTGGATGGACTTATAGCTCACTTCTGAAAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR TCA 72 bp | GCTGCTATGAAATGCAAAAGGCCCAGATGTGCCTTCTaGGTTGGAGCAAGTATGATATGGGTTCTGACTCCT | + |
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Preference number: 3 (lower is better) Translates to: AAMKCKRPRCAF*VGASMIWVLTP Trigger: AGGAGTCAGAACCCATATCATACTTGCTCCAACTCAGAAGGCACATCTGGGCCTTTTGCATTTCATAGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR TCA 72 bp | CCTGCTTCTCTAAAAAGGAGATGCTTGCTGCTGCTATaGAATGCAAAAGGCCCAGATGTGCCTTCTGAGTTG | + |
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Preference number: 3 (lower is better) Translates to: PASLKRRCLLLL*NAKGPDVPSEL Trigger: CAACTCAGAAGGCACATCTGGGCCTTTTGCATTTCATAGCAGCAGCAAGCATCTCCTTTTTAGAGAAGCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| 3UTR TCA 72 bp | GAGCCAACCAGGCATAGACTAGAACCTCCAAACTGTTaGGTCTGCAGAAACCGCTCCTCTTTATGTTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: EPTRHRLEPPNC*VCRNRSSLCSS Trigger: TGAAGAACATAAAGAGGAGCGGTTTCTGCAGACTCAACAGTTTGGAGGTTCTAGTCTATGCCTGGTTGGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| 3UTR CCA 72 bp | TATGAAATGCAAAAGGCCCAGATGTGCCTTCTGAGTTaGAGCAAGTATGATATGGGTTCTGACTCCTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: YEMQKAQMCLLS*SKYDMGSDSSS Trigger: GGAGGAGGAGTCAGAACCCATATCATACTTGCTCCAACTCAGAAGGCACATCTGGGCCTTTTGCATTTCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| 3UTR GCA 72 bp | GATGTTCTGGTTTACAAAGCTTGCTTCCTTCCAGCCTaGTTCTCTAAAAAGGAGATGCTTGCTGCTGCTATG | + |
|
Preference number: 3 (lower is better) Translates to: DVLVYKACFLPA*FSKKEMLAAAM Trigger: CATAGCAGCAGCAAGCATCTCCTTTTTAGAGAAGCAGGCTGGAAGGAAGCAAGCTTTGTAAACCAGAACATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| 3UTR-3UTR CAA 90 bp | AACCTTCCTTCCCCAAGGAGCATTTGCAGATGTAGCTTAGAGATGCTGGCACAGACAATCCTGGCCTTTTaGGGTTTTGTTGCTTATAAA | + |
|
Preference number: 3 (lower is better) Translates to: NLPSPRSICRCSLEMLAQTILAF*GFVAYK Trigger: TTTATAAGCAACAAAACCCAAAAAGGCCAGGATTGT...CTGTGCCAGCATCTCTAAGCTACATCTGCAAATGCTCCTTGGGGAAGGAAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| 3UTR-3UTR CAA 90 bp | AAAGCTTGCTTCCTTCCAGCCTGCTTCTCTAAAAAGGAGATGCTTGCTGCTGCTAGTAGCACAGCCTTGTaGAAATTCAACAAAAGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: KACFLPACFSKKEMLAAASSTAL*KFNKRV Trigger: AACCCTTTTGTTGAATTTCAACAAGGCTGTGCTACT...AGCAGCAGCAAGCATCTCCTTTTTAGAGAAGCAGGCTGGAAGGAAGCAAGCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| 3UTR-3UTR CAA 90 bp | AAAGCTTGCTTCCTTCCAGCCTGCTTCTCTAAAAAGGAGATGCTTGCTGCTGCTTCCCATGATGGCTTGTaGATCAAGATCATATCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: KACFLPACFSKKEMLAAASHDGL*IKIISK Trigger: TTTTGATATGATCTTGATCAACAAGCCATCATGGGA...AGCAGCAGCAAGCATCTCCTTTTTAGAGAAGCAGGCTGGAAGGAAGCAAGCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTGATGTTCTGGTTTACAAAGCTTGCTTCCTTCCAGCCTGCTTCTCTAAAAAGCCTTTTTGGGTTTTGTaGCTTATAAATAAGCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: PDVLVYKACFLPACFSKKPFWVL*LINKPP Trigger: TGGAGGCTTATTTATAAGCAACAAAACCCAAAAAGG...CTTTTTAGAGAAGCAGGCTGGAAGGAAGCAAGCTTTGTAAACCAGAACATCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS-3UTR GCA 90 bp | CTACACACCTCTCCTGAGGTGGGTTTGAACTCTGGGCTCAGAGGAGCTGCTATGGATCAGCCGCACCCCTaGAGCCCTCCTCACCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHTSPEVGLNSGLRGAAMDQPHP*SPPHPL Trigger: GAGCGGGTGAGGAGGGCTGCAGGGGTGCGGCTGATC...CATAGCAGCTCCTCTGAGCCCAGAGTTCAAACCCACCTCAGGAGAGGTGTGTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS-3UTR CCA 90 bp | TGCCAGGTAGGGTCTGAGGGATGCTGGGAAAACCTGGAGGCCAGGTCTGCTTCACCATTGCCTCCAAGATaGCAGCTGACATGCCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: CQVGSEGCWENLEARSASPLPPR*QLTCPR Trigger: CCGAGGGCATGTCAGCTGCCATCTTGGAGGCAATGG...TGAAGCAGACCTGGCCTCCAGGTTTTCCCAGCATCCCTCAGACCCTACCTGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS-3UTR TCA 90 bp | AACCTTCCTTCCCCAAGGAGCATTTGCAGATGTAGCTTAGAGATGCTGGCACAGACCGCGTTGCCAGTGTaGGGCCTCAGTACTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NLPSPRSICRCSLEMLAQTALPV*GLSTAR Trigger: CCTGGCAGTACTGAGGCCTCACACTGGCAACGCGGT...CTGTGCCAGCATCTCTAAGCTACATCTGCAAATGCTCCTTGGGGAAGGAAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS-3UTR TCA 90 bp | TTCAGAGTTGGGGGCAGGATATGCCAGGTAGGGTCTGAGGGATGCTGGGAAAACCCTTCATTGCCTCGGTaGAAGCCACAGCAAACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FRVGGRICQVGSEGCWENPSLPR*KPQQTW Trigger: CCAGGTTTGCTGTGGCTTTCACCGAGGCAATGAAGG...GTTTTCCCAGCATCCCTCAGACCCTACCTGGCATATCCTGCCCCCAACTCTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS-3UTR CCA 90 bp | CAGCTCAGGCTGAGGGCCAAGGAAATGGACACATTTCTCAGTGCGCCTTGCAAACTTCCCAGTTGCATGTaGCCACTGCACCTGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QLRLRAKEMDTFLSAPCKLPSCM*PLHLSC Trigger: ACAGCTCAGGTGCAGTGGCCACATGCAACTGGGAAG...TTTGCAAGGCGCACTGAGAAATGTGTCCATTTCCTTGGCCCTCAGCCTGAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| 3UTR CAA 72 bp | CCACCCACATTGAATTTAAGGCTCCCAGCCTCCATCTaGAGAGCCAGACTCCCTGTGATGTCATACAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PPTLNLRLPASI*RARLPVMSYRG Trigger: CCCCCTGTATGACATCACAGGGAGTCTGGCTCTCAAGATGGAGGCTGGGAGCCTTAAATTCAATGTGGGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS-3UTR GCA 90 bp | ACCACCCACATTGAATTTAAGGCTCCCAGCCTCCATCTTGAGAGCCAGACTCCCGCAGCTCTTCACCACTaGATGCAGATCTTCCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TTHIEFKAPSLHLESQTPAALHH*MQIFLA Trigger: TGCCAGGAAGATCTGCATGCAGTGGTGAAGAGCTGC...GGGAGTCTGGCTCTCAAGATGGAGGCTGGGAGCCTTAAATTCAATGTGGGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS-3UTR TCA 90 bp | TTCAGAGTTGGGGGCAGGATATGCCAGGTAGGGTCTGAGGGATGCTGGGAAAACGCTTTGGTCAATCTCTaGTTGCTGCAGGAAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FRVGGRICQVGSEGCWENALVNL*LLQEGV Trigger: AACACCTTCCTGCAGCAATCAGAGATTGACCAAAGC...GTTTTCCCAGCATCCCTCAGACCCTACCTGGCATATCCTGCCCCCAACTCTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS-3UTR GCA 90 bp | CAGCTCAGGCTGAGGGCCAAGGAAATGGACACATTTCTCAGTGCGCCTTGCAAACTCTTCACCACTGCATaGAGATCTTCCTGGCACATC | + |
|
Preference number: 4 (lower is better) Translates to: QLRLRAKEMDTFLSAPCKLFTTA*RSSWHI Trigger: GATGTGCCAGGAAGATCTGCATGCAGTGGTGAAGAG...TTTGCAAGGCGCACTGAGAAATGTGTCCATTTCCTTGGCCCTCAGCCTGAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS-3UTR CCA 90 bp | ACCACCCACATTGAATTTAAGGCTCCCAGCCTCCATCTTGAGAGCCAGACTCCCAAGCCACAGCAAACCTaGCTTCCTCCAGAACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TTHIEFKAPSLHLESQTPKPQQT*LPPELS Trigger: GGAAAGTTCTGGAGGAAGCCAGGTTTGCTGTGGCTT...GGGAGTCTGGCTCTCAAGATGGAGGCTGGGAGCCTTAAATTCAATGTGGGTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS-3UTR CCA 90 bp | GGAAAGTTCAGAGTTGGGGGCAGGATATGCCAGGTAGGGTCTGAGGGATGCTGGTTCCCTTGTAAACACTaGATCTACCTCAGGACCTAC | + |
|
Preference number: 4 (lower is better) Translates to: GKFRVGGRICQVGSEGCWFPCKH*IYLRTY Trigger: GTAGGTCCTGAGGTAGATCCAGTGTTTACAAGGGAA...CCAGCATCCCTCAGACCCTACCTGGCATATCCTGCCCCCAACTCTGAACTTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS-3UTR CCA 90 bp | CGCTGTTGTAGGGAGATCCCATCGAAAGATACCCCCACTACCCAGATTGACTTCGCATGCAGATCTTCCTaGCACATCTCTCGGATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RCCREIPSKDTPTTQIDFACRSS*HISRIS Trigger: GCTGATCCGAGAGATGTGCCAGGAAGATCTGCATGC...GAAGTCAATCTGGGTAGTGGGGGTATCTTTCGATGGGATCTCCCTACAACAGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS-3UTR TCA 90 bp | AGATCCCATCGAAAGATACCCCCACTACCCAGATTGACTTCTCATACCCCAGTGCCGAAAGGAATGCTGTaGCCTTGCAGAAGTCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSHRKIPPLPRLTSHTPVPKGML*PCRSLP Trigger: AGGCAGACTTCTGCAAGGTCACAGCATTCCTTTCGG...CACTGGGGTATGAGAAGTCAATCTGGGTAGTGGGGGTATCTTTCGATGGGATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS-3UTR GCA 90 bp | CAGCTCAGGCTGAGGGCCAAGGAAATGGACACATTTCTCAGTGCGCCTTGCAAATGGTCAATCTCTGATTaGTGCAGGAAGGTGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QLRLRAKEMDTFLSAPCKWSISD*CRKVFQ Trigger: CTGGAACACCTTCCTGCAGCAATCAGAGATTGACCA...TTTGCAAGGCGCACTGAGAAATGTGTCCATTTCCTTGGCCCTCAGCCTGAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS-3UTR CCA 90 bp | ATCTTTTGGCATCTGCCCCGAGCTGAGCACCTGATGGTTGTTGGGACAGATGTGCGTATTCCCTTCCGTTaGTCACGATTTCCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IFWHLPRAEHLMVVGTDVRIPFR*SRFPSP Trigger: TGGAGAAGGAAATCGTGACCAACGGAAGGGAATACG...CACATCTGTCCCAACAACCATCAGGTGCTCAGCTCGGGGCAGATGCCAAAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| 3UTR CAA 72 bp | GGGAGATCCCATCGAAAGATACCCCCACTACCCAGATaGACTTCTCATACCCCAGTGACCTCTTGTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: GRSHRKIPPLPR*TSHTPVTSCHS Trigger: ACTGTGACAAGAGGTCACTGGGGTATGAGAAGTCAATCTGGGTAGTGGGGGTATCTTTCGATGGGATCTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS-3UTR TCA 90 bp | CTGCAGAAACCGCTCCTCTTTATGTTCTTCAAGTGTCTGGTACGGAAAGGGAAATCCACCTGCCAGGAATaGTGCGTCCTCACGTATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQKPLLFMFFKCLVRKGKSTCQE*CVLTYS Trigger: GGAATACGTGAGGACGCATCATTCCTGGCAGGTGGA...TTTCCCTTTCCGTACCAGACACTTGAAGAACATAAAGAGGAGCGGTTTCTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS-3UTR GCA 90 bp | AACCTTCCTTCCCCAAGGAGCATTTGCAGATGTAGCTTAGAGATGCTGGCACAGAAAGATCTTCCCAGTTaGATGTGGCCACTGCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: NLPSPRSICRCSLEMLAQKDLPS*MWPLHL Trigger: CAGGTGCAGTGGCCACATGCAACTGGGAAGATCTTT...CTGTGCCAGCATCTCTAAGCTACATCTGCAAATGCTCCTTGGGGAAGGAAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS-3UTR GCA 90 bp | AACCTTCCTTCCCCAAGGAGCATTTGCAGATGTAGCTTAGAGATGCTGGCACAGGCTAACCAGTCTCTTTaGCAACTGAATGAACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NLPSPRSICRCSLEMLAQANQSL*QLNELL Trigger: CAGGAGTTCATTCAGTTGGCAAAGAGACTGGTTAGC...CTGTGCCAGCATCTCTAAGCTACATCTGCAAATGCTCCTTGGGGAAGGAAGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS-3UTR CCA 90 bp | AAAGCTTGCTTCCTTCCAGCCTGCTTCTCTAAAAAGGAGATGCTTGCTGCTGCTAGGTTGTCAGCGCTTTaGTCAATCTCTGATTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KACFLPACFSKKEMLAAARLSAL*SISDCC Trigger: GCAGCAATCAGAGATTGACCAAAGCGCTGACAACCT...AGCAGCAGCAAGCATCTCCTTTTTAGAGAAGCAGGCTGGAAGGAAGCAAGCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS-3UTR TCA 90 bp | AGATCCCATCGAAAGATACCCCCACTACCCAGATTGACTTCTCATACCCCAGTGACATTGGGTGTTTCTTaGTGCCATTCTGAGAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: RSHRKIPPLPRLTSHTPVTLGVS*CHSENA Trigger: TGCATTCTCAGAATGGCATCAAGAAACACCCAATGT...CACTGGGGTATGAGAAGTCAATCTGGGTAGTGGGGGTATCTTTCGATGGGATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS-3UTR CCA 90 bp | CAGCTCAGGCTGAGGGCCAAGGAAATGGACACATTTCTCAGTGCGCCTTGCAAATCACCATGTAAACATTaGGTGTTTCTTGATGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: QLRLRAKEMDTFLSAPCKSPCKH*VFLDAI Trigger: AATGGCATCAAGAAACACCCAATGTTTACATGGTGA...TTTGCAAGGCGCACTGAGAAATGTGTCCATTTCCTTGGCCCTCAGCCTGAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS-3UTR GCA 90 bp | AAAGCTTGCTTCCTTCCAGCCTGCTTCTCTAAAAAGGAGATGCTTGCTGCTGCTTCAATCTCTGATTGCTaGAGGAAGGTGTTCCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: KACFLPACFSKKEMLAAASISDC*RKVFQL Trigger: TAACTGGAACACCTTCCTGCAGCAATCAGAGATTGA...AGCAGCAGCAAGCATCTCCTTTTTAGAGAAGCAGGCTGGAAGGAAGCAAGCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS-3UTR TCA 90 bp | CTGCAGAAACCGCTCCTCTTTATGTTCTTCAAGTGTCTGGTACGGAAAGGGAAAATTGTTGCAATTCCTTaGCTCTGGACAAAGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LQKPLLFMFFKCLVRKGKIVAIP*LWTKIF Trigger: GAAGATCTTTGTCCAGAGTCAAGGAATTGCAACAAT...TTTCCCTTTCCGTACCAGACACTTGAAGAACATAAAGAGGAGCGGTTTCTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS-3UTR GCA 90 bp | TTACATCCTCTATCGAATCGGGCTCTGATTTCATCCCTGATGTTCTGGTTTACAGGCATTTGGTATTGTTaGAATTCCTTGACTCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LHPLSNRALISSLMFWFTGIWYC*NSLTLD Trigger: GTCCAGAGTCAAGGAATTGCAACAATACCAAATGCC...TGTAAACCAGAACATCAGGGATGAAATCAGAGCCCGATTCGATAGAGGATGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS-3UTR CCA 90 bp | AAAGCTTGCTTCCTTCCAGCCTGCTTCTCTAAAAAGGAGATGCTTGCTGCTGCTGTTAAAGTTGGCATTTaGTATTGTTGCAATTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KACFLPACFSKKEMLAAAVKVGI*YCCNSL Trigger: CAAGGAATTGCAACAATACCAAATGCCAACTTTAAC...AGCAGCAGCAAGCATCTCCTTTTTAGAGAAGCAGGCTGGAAGGAAGCAAGCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS TCA 90 bp | ACATGTGGCCTGCAGCTTCTAGGTGGTCCCGTAGGCGCCCAGCTGTaGCCGCGTTGCCAGTGTGAGGCCTCAGTACTGCCAGGAACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TCGLQLLGGPVGAQL*PRCQCEASVLPGTG Trigger: TCCTGTTCCTGGCAGTACTGAGGCCTCACACTGGCAACGCGGTCACAGCTGGGCGCCTACGGGACCACCTAGAAGCTGCAGGCCACATGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS GCA 90 bp | CTCGGAGACGGAGCTGTTGACCAGCGCAAAGCAGCTCTTCACCACTaGATGCAGATCTTCCTGGCACATCTCTCGGATCAGCCGCACCCC | + |
|
Preference number: 5 (lower is better) Translates to: LGDGAVDQRKAALHH*MQIFLAHLSDQPHP Trigger: GGGGTGCGGCTGATCCGAGAGATGTGCCAGGAAGATCTGCATGCAGTGGTGAAGAGCTGCTTTGCGCTGGTCAACAGCTCCGTCTCCGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS GCA 90 bp | CTTCCCAGTTGCATGTGGCCACTGCACCTGAGCTGTGTCCTTCATTaGCTCGGTGAAAGCCACAGCAAACCTGGCTTCCTCCAGAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: LPSCMWPLHLSCVLH*LGESHSKPGFLQNF Trigger: AAAGTTCTGGAGGAAGCCAGGTTTGCTGTGGCTTTCACCGAGGCAATGAAGGACACAGCTCAGGTGCAGTGGCCACATGCAACTGGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS CCA 90 bp | TCAGATGGGCTTTCAAAATCAAAGGCATCTCTCAGAACACACATGTaGCCTGCAGCTTCTAGGTGGTCCCGTAGGCGCCCAGCTGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: SDGLSKSKASLRTHM*PAASRWSRRRPAVT Trigger: GGTCACAGCTGGGCGCCTACGGGACCACCTAGAAGCTGCAGGCCACATGTGTGTTCTGAGAGATGCCTTTGATTTTGAAAGCCCATCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS-3UTR CAA 90 bp | GGAAAGTTCAGAGTTGGGGGCAGGATATGCCAGGTAGGGTCTGAGGGATGCTGGACGTATTCCCTTCCGTaGGTCACGATTTCCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GKFRVGGRICQVGSEGCWTYSLP*VTISFS Trigger: GGAGAAGGAAATCGTGACCAACGGAAGGGAATACGT...CCAGCATCCCTCAGACCCTACCTGGCATATCCTGCCCCCAACTCTGAACTTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS GCA 90 bp | CGTCCTCACGTATTCCCTTCCGTTGGTCACGATTTCCTTCTCCAGTaGGGGATCGCTAACCAGTCTCTTTGCCAACTGAATGAACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RPHVFPSVGHDFLLQ*GIANQSLCQLNELL Trigger: CAGGAGTTCATTCAGTTGGCAAAGAGACTGGTTAGCGATCCCGCACTGGAGAAGGAAATCGTGACCAACGGAAGGGAATACGTGAGGACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS CCA 90 bp | CCCTGCAGCCCTCCTCACCCGCTCTTTCACTTCCCTTGTAAACACTaGATCTACCTCAGGACCTACGATCACCATGTAAACATTGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PCSPPHPLFHFPCKH*IYLRTYDHHVNIGC Trigger: ACACCCAATGTTTACATGGTGATCGTAGGTCCTGAGGTAGATCCAGTGTTTACAAGGGAAGTGAAAGAGCGGGTGAGGAGGGCTGCAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS TCA 90 bp | ATCGCTAACCAGTCTCTTTGCCAACTGAATGAACTCCTGAGGGTTTaGAAACAGCAGTCCCGTGACTCCGTGCTCTACCACAGCCGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: IANQSLCQLNELLRV*KQQSRDSVLYHSRV Trigger: AACTCGGCTGTGGTAGAGCACGGAGTCACGGGACTGCTGTTTTCAAACCCTCAGGAGTTCATTCAGTTGGCAAAGAGACTGGTTAGCGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS CCA 90 bp | TGTTGCAATTCCTTGACTCTGGACAAAGATCTTCCCAGTTGCATGTaGCCACTGCACCTGAGCTGTGTCCTTCATTGCCTCGGTGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: CCNSLTLDKDLPSCM*PLHLSCVLHCLGES Trigger: GCTTTCACCGAGGCAATGAAGGACACAGCTCAGGTGCAGTGGCCACATGCAACTGGGAAGATCTTTGTCCAGAGTCAAGGAATTGCAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS-3UTR CAA 90 bp | AACCTTCCTTCCCCAAGGAGCATTTGCAGATGTAGCTTAGAGATGCTGGCACAGGAACTTCCAAATCCATaGCCTCCAAGATGGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NLPSPRSICRCSLEMLAQELPNP*PPRWQL Trigger: CAGCTGCCATCTTGGAGGCAATGGATTTGGAAGTTC...CTGTGCCAGCATCTCTAAGCTACATCTGCAAATGCTCCTTGGGGAAGGAAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS-3UTR CAA 90 bp | CCTGATGTTCTGGTTTACAAAGCTTGCTTCCTTCCAGCCTGCTTCTCTAAAAAGCAAAGATCTTCCCAGTaGCATGTGGCCACTGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: PDVLVYKACFLPACFSKKQRSSQ*HVATAP Trigger: AGGTGCAGTGGCCACATGCAACTGGGAAGATCTTTG...CTTTTTAGAGAAGCAGGCTGGAAGGAAGCAAGCTTTGTAAACCAGAACATCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS TCA 90 bp | TTTCTTTGTGATTGGCATCTTCATTTAAGTCAGTTCCACCAAAGATaGCCCCGAAAGGAATGCTGTGACCTTGCAGAAGTCTGCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FLCDWHLHLSQFHQR*PRKECCDLAEVCLL Trigger: GAGGAGGCAGACTTCTGCAAGGTCACAGCATTCCTTTCGGGGTCATCTTTGGTGGAACTGACTTAAATGAAGATGCCAATCACAAAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS-3UTR CAA 90 bp | AAGATACCCCCACTACCCAGATTGACTTCTCATACCCCAGTGACCTCTTGTCACAGTTGGCATTTGGTATaGTTGCAATTCCTTGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: KIPPLPRLTSHTPVTSCHSWHLV*LQFLDS Trigger: AGAGTCAAGGAATTGCAACAATACCAAATGCCAACT...GTGACAAGAGGTCACTGGGGTATGAGAAGTCAATCTGGGTAGTGGGGGTATCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
||
| CDS TCA 90 bp | CTCGGTAGAGGTGAAGAGCTAGTGCTGCTTCCAGATTTTCATCCATaGTCAGGTTGGCAATTTCAGATGGGCTTTCAAAATCAAAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: LGRGEELVLLPDFHP*SGWQFQMGFQNQRH Trigger: ATGCCTTTGATTTTGAAAGCCCATCTGAAATTGCCAACCTGATCATGGATGAAAATCTGGAAGCAGCACTAGCTCTTCACCTCTACCGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| CDS-3UTR CAA 90 bp | CTGCAGAAACCGCTCCTCTTTATGTTCTTCAAGTGTCTGGTACGGAAAGGGAAAGTGTTCCAGTTAAAGTaGGCATTTGGTATTGTTGCA | + |
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Preference number: 5 (lower is better) Translates to: LQKPLLFMFFKCLVRKGKVFQLK*AFGIVA Trigger: TGCAACAATACCAAATGCCAACTTTAACTGGAACAC...TTTCCCTTTCCGTACCAGACACTTGAAGAACATAAAGAGGAGCGGTTTCTGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| CDS TCA 72 bp | CTGCAGCTTCTAGGTGGTCCCGTAGGCGCCCAGCTGTaGCCGCGTTGCCAGTGTGAGGCCTCAGTACTGCCA | + |
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Preference number: 6 (lower is better) Translates to: LQLLGGPVGAQL*PRCQCEASVLP Trigger: TGGCAGTACTGAGGCCTCACACTGGCAACGCGGTCACAGCTGGGCGCCTACGGGACCACCTAGAAGCTGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| CDS GCA 72 bp | TGCATGTGGCCACTGCACCTGAGCTGTGTCCTTCATTaGCTCGGTGAAAGCCACAGCAAACCTGGCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: CMWPLHLSCVLH*LGESHSKPGFL Trigger: GAGGAAGCCAGGTTTGCTGTGGCTTTCACCGAGGCAATGAAGGACACAGCTCAGGTGCAGTGGCCACATGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| CDS GCA 72 bp | CTGTTGACCAGCGCAAAGCAGCTCTTCACCACTGCATaGAGATCTTCCTGGCACATCTCTCGGATCAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: LLTSAKQLFTTA*RSSWHISRISR Trigger: GCGGCTGATCCGAGAGATGTGCCAGGAAGATCTGCATGCAGTGGTGAAGAGCTGCTTTGCGCTGGTCAACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| CDS CCA 72 bp | CGTGCTCTACCACAGCCGAGTTCCCAGGGATGTTCCTaGCTAGCACGGGAACTTCCAAATCCATTGCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: RALPQPSSQGCS*LARELPNPLPP Trigger: TGGAGGCAATGGATTTGGAAGTTCCCGTGCTAGCCAGGAACATCCCTGGGAACTCGGCTGTGGTAGAGCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| CDS GCA 72 bp | GGAGCTGTTGACCAGCGCAAAGCAGCTCTTCACCACTaGATGCAGATCTTCCTGGCACATCTCTCGGATCAG | + |
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Preference number: 6 (lower is better) Translates to: GAVDQRKAALHH*MQIFLAHLSDQ Trigger: CTGATCCGAGAGATGTGCCAGGAAGATCTGCATGCAGTGGTGAAGAGCTGCTTTGCGCTGGTCAACAGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| CDS CAA 72 bp | TCCACCAAAGATGACCCCGAAAGGAATGCTGTGACCTaGCAGAAGTCTGCCTCCTCGGTAGAGGTGAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: STKDDPERNAVT*QKSASSVEVKS Trigger: GCTCTTCACCTCTACCGAGGAGGCAGACTTCTGCAAGGTCACAGCATTCCTTTCGGGGTCATCTTTGGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| CDS TCA 72 bp | ACAAAGATCTTCCCAGTTGCATGTGGCCACTGCACCTaGGCTGTGTCCTTCATTGCCTCGGTGAAAGCCACA | + |
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Preference number: 6 (lower is better) Translates to: TKIFPVACGHCT*AVSFIASVKAT Trigger: TGTGGCTTTCACCGAGGCAATGAAGGACACAGCTCAGGTGCAGTGGCCACATGCAACTGGGAAGATCTTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| CDS TCA 72 bp | CAGTCTCTTTGCCAACTGAATGAACTCCTGAGGGTTTaGAAACAGCAGTCCCGTGACTCCGTGCTCTACCAC | + |
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Preference number: 6 (lower is better) Translates to: QSLCQLNELLRV*KQQSRDSVLYH Trigger: GTGGTAGAGCACGGAGTCACGGGACTGCTGTTTTCAAACCCTCAGGAGTTCATTCAGTTGGCAAAGAGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| CDS CAA 90 bp | TTGGTATTGTTGCAATTCCTTGACTCTGGACAAAGATCTTCCCAGTaGCATGTGGCCACTGCACCTGAGCTGTGTCCTTCATTGCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: LVLLQFLDSGQRSSQ*HVATAPELCPSLPR Trigger: CCGAGGCAATGAAGGACACAGCTCAGGTGCAGTGGCCACATGCAACTGGGAAGATCTTTGTCCAGAGTCAAGGAATTGCAACAATACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| CDS CAA 90 bp | TCCTTCACCGGTCTGAGTCCACAGATTATAAGGAATATGTACAGGTaGTCAGCGCTTTGGTCAATCTCTGATTGCTGCAGGAAGGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: SFTGLSPQIIRNMYR*SALWSISDCCRKVF Trigger: GAACACCTTCCTGCAGCAATCAGAGATTGACCAAAGCGCTGACAACCTGTACATATTCCTTATAATCTGTGGACTCAGACCGGTGAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| CDS GCA 72 bp | TACAGGTTGTCAGCGCTTTGGTCAATCTCTGATTGCTaGAGGAAGGTGTTCCAGTTAAAGTTGGCATTTGGT | + |
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Preference number: 6 (lower is better) Translates to: YRLSALWSISDC*RKVFQLKLAFG Trigger: ACCAAATGCCAACTTTAACTGGAACACCTTCCTGCAGCAATCAGAGATTGACCAAAGCGCTGACAACCTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| CDS CAA 72 bp | GGTCTGAGTCCACAGATTATAAGGAATATGTACAGGTaGTCAGCGCTTTGGTCAATCTCTGATTGCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: GLSPQIIRNMYR*SALWSISDCCR Trigger: CCTGCAGCAATCAGAGATTGACCAAAGCGCTGACAACCTGTACATATTCCTTATAATCTGTGGACTCAGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| CDS GCA 72 bp | ATGTACAGGTTGTCAGCGCTTTGGTCAATCTCTGATTaGTGCAGGAAGGTGTTCCAGTTAAAGTTGGCATTT | + |
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Preference number: 6 (lower is better) Translates to: MYRLSALWSISD*CRKVFQLKLAF Trigger: AAATGCCAACTTTAACTGGAACACCTTCCTGCAGCAATCAGAGATTGACCAAAGCGCTGACAACCTGTACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| CDS CCA 72 bp | GATCTACCTCAGGACCTACGATCACCATGTAAACATTaGGTGTTTCTTGATGCCATTCTGAGAATGCATCCA | + |
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Preference number: 6 (lower is better) Translates to: DLPQDLRSPCKH*VFLDAILRMHP Trigger: TGGATGCATTCTCAGAATGGCATCAAGAAACACCCAATGTTTACATGGTGATCGTAGGTCCTGAGGTAGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| CDS TCA 72 bp | GGTGAAGAGCTAGTGCTGCTTCCAGATTTTCATCCATaGTCAGGTTGGCAATTTCAGATGGGCTTTCAAAAT | + |
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Preference number: 6 (lower is better) Translates to: GEELVLLPDFHP*SGWQFQMGFQN Trigger: ATTTTGAAAGCCCATCTGAAATTGCCAACCTGATCATGGATGAAAATCTGGAAGCAGCACTAGCTCTTCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| CDS TCA 72 bp | CAGTTAAAGTTGGCATTTGGTATTGTTGCAATTCCTTaGCTCTGGACAAAGATCTTCCCAGTTGCATGTGGC | + |
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Preference number: 6 (lower is better) Translates to: QLKLAFGIVAIP*LWTKIFPVACG Trigger: GCCACATGCAACTGGGAAGATCTTTGTCCAGAGTCAAGGAATTGCAACAATACCAAATGCCAACTTTAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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| CDS CCA 72 bp | TTGCTGCAGGAAGGTGTTCCAGTTAAAGTTGGCATTTaGTATTGTTGCAATTCCTTGACTCTGGACAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: LLQEGVPVKVGI*YCCNSLTLDKD Trigger: ATCTTTGTCCAGAGTCAAGGAATTGCAACAATACCAAATGCCAACTTTAACTGGAACACCTTCCTGCAGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118139.3 |
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