Pregenerated sensors for GLRX5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021102Ensembl transcript IDs: ENSMUST00000021522.5, ENSMUST00000223244.2
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGGCTTCAAAGGCCCCGTTCTCTGTGGCTCTGATAGGATCTCACTaGTTCACAGGCTCTGAGTGGGCCTGCAGCCTATCCTGGTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: GASKAPFSVALIGSH*FTGSEWACSLSWSS Trigger: GCTGGACCAGGATAGGCTGCAGGCCCACTCAGAGCCTGTGAATCAGTGAGATCCTATCAGAGCCACAGAGAACGGGGCCTTTGAAGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR TCA 90 bp | GAAAAACGCGTCAGAGGCCAGCTCATGGCTTCTCCCATTTCAAGGTaGCATCCCTCCTGCACAGCCTCGCCACCTGGCTCAAGGACACAC | + |
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Preference number: 1 (lower is better) Translates to: EKRVRGQLMASPISR*HPSCTASPPGSRTH Trigger: GTGTGTCCTTGAGCCAGGTGGCGAGGCTGTGCAGGAGGGATGTCACCTTGAAATGGGAGAAGCCATGAGCTGGCCTCTGACGCGTTTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR TCA 90 bp | AATGAGGAAGGCGGCATGCTTAGGCTGTGGCTCTCCTCCCCTTCTTaGGGAACCCCAAATCCTGGGAGCCCAGCATACCCTGTGTACAGG | + |
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Preference number: 1 (lower is better) Translates to: NEEGGMLRLWLSSPS*GTPNPGSPAYPVYR Trigger: CCTGTACACAGGGTATGCTGGGCTCCCAGGATTTGGGGTTCCTCAAGAAGGGGAGGAGAGCCACAGCCTAAGCATGCCGCCTTCCTCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR GCA 90 bp | CGCAGCCTTCCACCCTACCTCAGGAAGGCCGCTACTCATTCTCTGTaGCCTATTCATGGAAAAAGGCAGCCTCTCTCCCGCCTCTATGAC | + |
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Preference number: 1 (lower is better) Translates to: RSLPPYLRKAATHSL*PIHGKRQPLSRLYD Trigger: GTCATAGAGGCGGGAGAGAGGCTGCCTTTTTCCATGAATAGGGCACAGAGAATGAGTAGCGGCCTTCCTGAGGTAGGGTGGAAGGCTGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR CCA 90 bp | ATGGAAAAAGGCAGCCTCTCTCCCGCCTCTATGACTTCTAGGCGTTaGGAGACTGAATGTGGCTTCCTGCACAGGCAGACACACTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: MEKGSLSPASMTSRR*ETECGFLHRQTHWK Trigger: CTTCCAGTGTGTCTGCCTGTGCAGGAAGCCACATTCAGTCTCCCAACGCCTAGAAGTCATAGAGGCGGGAGAGAGGCTGCCTTTTTCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR CCA 90 bp | CGGCAGCTTCCTGGCAGTACTGGGTGCCACGGGATGACAGGTCGCTaGGATTACTTTTGTTGCTGTTACTGTTGCTTGCTGGGAGCTTTT | + |
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Preference number: 1 (lower is better) Translates to: RQLPGSTGCHGMTGR*DYFCCCYCCLLGAF Trigger: AAAAGCTCCCAGCAAGCAACAGTAACAGCAACAAAAGTAATCCCAGCGACCTGTCATCCCGTGGCACCCAGTACTGCCAGGAAGCTGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223244.2 |
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| 3UTR CCA 90 bp | TCTCAGACACTGTCACAGTTCCACCCTGCCCACTGTCTTGTCTCATaGCTGACATTTAAAGAGCTCTGCCTCAAGGACGCACGGCAGCTT | + |
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Preference number: 1 (lower is better) Translates to: SQTLSQFHPAHCLVS*LTFKELCLKDARQL Trigger: AAGCTGCCGTGCGTCCTTGAGGCAGAGCTCTTTAAATGTCAGCCATGAGACAAGACAGTGGGCAGGGTGGAACTGTGACAGTGTCTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223244.2 |
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| 3UTR TCA 90 bp | GATGAGCTATGGTGGCAGATAGCCAACATCTCAGCACTGCAAGGTTaGGGGAGGCAAGAGGATCTAGCTCACCTTTGGCTACTTGATGAG | + |
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Preference number: 1 (lower is better) Translates to: DELWWQIANISALQG*GRQEDLAHLWLLDE Trigger: CTCATCAAGTAGCCAAAGGTGAGCTAGATCCTCTTGCCTCCCTCAACCTTGCAGTGCTGAGATGTTGGCTATCTGCCACCATAGCTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR CCA 90 bp | GGGAGTACTGTTAATTTCTCAAAATCAGAGGACACAGGCAGGCCCTaGCGCTGTACCTCAGCTGATAAAGTGCTTGCCTGGTGTGACCAA | + |
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Preference number: 1 (lower is better) Translates to: GSTVNFSKSEDTGRP*RCTSADKVLAWCDQ Trigger: TTGGTCACACCAGGCAAGCACTTTATCAGCTGAGGTACAGCGCCAGGGCCTGCCTGTGTCCTCTGATTTTGAGAAATTAACAGTACTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR CCA 90 bp | CTCTGGATTGATGAGCCCTGGGGAAGTCCCACCAAGACACTGAACTaGAAGACAGACGTAGTTCCAGTGATTTCCTCTGAGAACCCAGTT | + |
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Preference number: 1 (lower is better) Translates to: LWIDEPWGSPTKTLN*KTDVVPVISSENPV Trigger: AACTGGGTTCTCAGAGGAAATCACTGGAACTACGTCTGTCTTCCAGTTCAGTGTCTTGGTGGGACTTCCCCAGGGCTCATCAATCCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR TCA 90 bp | AGGCGCTCCCTAGTAGCCGAAAGGAACTTCAGAGCAGCCAAATGGTaGATGGGAGTACTGTTAATTTCTCAAAATCAGAGGACACAGGCA | + |
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Preference number: 1 (lower is better) Translates to: RRSLVAERNFRAAKW*MGVLLISQNQRTQA Trigger: TGCCTGTGTCCTCTGATTTTGAGAAATTAACAGTACTCCCATTCACCATTTGGCTGCTCTGAAGTTCCTTTCGGCTACTAGGGAGCGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR-3UTR CCA 90 bp | CCGCTTGCTGCCAGGAGGCCCAGCGCAAGCATCACAGCAACAGGGCACCACCACTTCTGGCCCCGAGGATaGAGAGGGCGCTCTGCTCGG | + |
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Preference number: 2 (lower is better) Translates to: PLAARRPSASITATGHHHFWPRG*RGRSAR Trigger: CCGAGCAGAGCGCCCTCTCCATCCTCGGGGCCAGAA...GTGGTGGTGCCCTGTTGCTGTGATGCTTGCGCTGGGCCTCCTGGCAGCAAGCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR-3UTR TCA 90 bp | AGACCTGGGCTCAGTGGCCCTGCACCCAAGTCTGATGGTTCCCGGCTGTCTTTACGGCCTGGGCTGCACTaGAAGACAGAGGGAGGGACA | + |
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Preference number: 2 (lower is better) Translates to: RPGLSGPAPKSDGSRLSLRPGLH*KTEGGT Trigger: TGTCCCTCCCTCTGTCTTTCAGTGCAGCCCAGGCCG...TAAAGACAGCCGGGAACCATCAGACTTGGGTGCAGGGCCACTGAGCCCAGGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR-3UTR GCA 90 bp | CTGAATGTGGCTTCCTGCACAGGCAGACACACTGGAAGAGAAGTGTCCCACAGGAAGCACCTGCCCGCTTaGTGCCAGGAGGCCCAGCGC | + |
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Preference number: 2 (lower is better) Translates to: LNVASCTGRHTGREVSHRKHLPA*CQEAQR Trigger: GCGCTGGGCCTCCTGGCAGCAAGCGGGCAGGTGCTT...CCTGTGGGACACTTCTCTTCCAGTGTGTCTGCCTGTGCAGGAAGCCACATTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR-3UTR GCA 90 bp | AGTGGGCCTGCAGCCTATCCTGGTCCAGCTTACACTCCAGCGAGAATACTTACACACCTGCCCGCTTGCTaGCAGGAGGCCCAGCGCAAG | + |
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Preference number: 2 (lower is better) Translates to: SGPAAYPGPAYTPARILTHLPAC*QEAQRK Trigger: CTTGCGCTGGGCCTCCTGGCAGCAAGCGGGCAGGTG...TGTAAGTATTCTCGCTGGAGTGTAAGCTGGACCAGGATAGGCTGCAGGCCCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR-3UTR GCA 90 bp | CTTGAGGAACCCCAAATCCTGGGAGCCCAGCATACCCTGTGTACAGGGAAGCCCAATGCCGGCCTGGGCTaGACTGAAAGACAGAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: LEEPQILGAQHTLCTGKPNAGLG*TERQRE Trigger: CTCCCTCTGTCTTTCAGTGCAGCCCAGGCCGGCATT...GGGCTTCCCTGTACACAGGGTATGCTGGGCTCCCAGGATTTGGGGTTCCTCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR-3UTR GCA 90 bp | AGTGGGCCTGCAGCCTATCCTGGTCCAGCTTACACTCCAGCGAGAATACTTACACCCAGAGGACAGAGCTaGCAGCCCAGACAGGCCGCT | + |
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Preference number: 2 (lower is better) Translates to: SGPAAYPGPAYTPARILTPRGQS*QPRQAA Trigger: AGCGGCCTGTCTGGGCTGGCAGCTCTGTCCTCTGGG...TGTAAGTATTCTCGCTGGAGTGTAAGCTGGACCAGGATAGGCTGCAGGCCCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR CAA 90 bp | AGAGGGAATTCTGAGCCAGAGACTAAAGTAAAAGCACCTGCCCGCTaGCTGCCAGGAGGCCCAGCGCAAGCATCACAGCAACAGGGCACC | + |
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Preference number: 2 (lower is better) Translates to: RGNSEPETKVKAPAR*LPGGPAQASQQQGT Trigger: GGTGCCCTGTTGCTGTGATGCTTGCGCTGGGCCTCCTGGCAGCAAGCGGGCAGGTGCTTTTACTTTAGTCTCTGGCTCAGAATTCCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR-3UTR CCA 90 bp | AGACCTGGGCTCAGTGGCCCTGCACCCAAGTCTGATGGTTCCCGGCTGTCTTTACCTCAACTTCCTACCTaGTTACTGCGTGCAGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: RPGLSGPAPKSDGSRLSLPQLPT*LLRAGH Trigger: GTGCCCTGCACGCAGTAACCAGGTAGGAAGTTGAGG...TAAAGACAGCCGGGAACCATCAGACTTGGGTGCAGGGCCACTGAGCCCAGGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR-3UTR TCA 90 bp | ACGCAGCCTTCCACCCTACCTCAGGAAGGCCGCTACTCATTCTCTGTGCCCTATCGCTATGGTGGCAGATaGGCTATGGTGGCAGATAGC | + |
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Preference number: 2 (lower is better) Translates to: TQPSTLPQEGRYSFSVPYRYGGR*AMVADS Trigger: GCTATCTGCCACCATAGCTCATCTGCCACCATAGCG...ATAGGGCACAGAGAATGAGTAGCGGCCTTCCTGAGGTAGGGTGGAAGGCTGCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR-3UTR GCA 90 bp | GTGGGTTTATTATGCAGGAGGCCAAGGGTTGGGAGTCACAAAATAAACAAACGAATGGAGAGGGCGCTCTaGTCGGCGAGGGCCCGGGGC | + |
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Preference number: 2 (lower is better) Translates to: VGLLCRRPRVGSHKINKRMERAL*SARARG Trigger: GCCCCGGGCCCTCGCCGAGCAGAGCGCCCTCTCCAT...TCGTTTGTTTATTTTGTGACTCCCAACCCTTGGCCTCCTGCATAATAAACCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR-3UTR GCA 90 bp | AAGTGCCCTCAGACACAGTCCATCTTGGCAGGAAGTCATGGTGGACGAAGCAGGCGCCCATCAGCTGGCTaGCAACAGGTGGTTCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: KCPQTQSILAGSHGGRSRRPSAG*QQVVLR Trigger: TCTGAGAACCACCTGTTGGCAGCCAGCTGATGGGCG...CCTGCTTCGTCCACCATGACTTCCTGCCAAGATGGACTGTGTCTGAGGGCACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223244.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCTTCCACCCTACCTCAGGAAGGCCGCTACTCATTCTCTGTGCCCTATTCATGACACAGGCAGGCCCTaGCGCTGTACCTCAGCTGAT | + |
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Preference number: 2 (lower is better) Translates to: SLPPYLRKAATHSLCPIHDTGRP*RCTSAD Trigger: ATCAGCTGAGGTACAGCGCCAGGGCCTGCCTGTGTC...ATGAATAGGGCACAGAGAATGAGTAGCGGCCTTCCTGAGGTAGGGTGGAAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR-3UTR CCA 90 bp | CTACTCATTCTCTGTGCCCTATTCATGGAAAAAGGCAGCCTCTCTCCCGCCTCTGTGAGAAGCAGAGGGTaGCAGAGAGCTGGGGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: LLILCALFMEKGSLSPASVRSRG*QRAGGR Trigger: CCTTCCCCCAGCTCTCTGCCACCCTCTGCTTCTCAC...AGAGGCGGGAGAGAGGCTGCCTTTTTCCATGAATAGGGCACAGAGAATGAGTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR-3UTR CCA 90 bp | CTTGAGGAACCCCAAATCCTGGGAGCCCAGCATACCCTGTGTACAGGGAAGCCCTCAGAGGCCAGCTCATaGCTTCTCCCATTTCAAGGT | + |
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Preference number: 2 (lower is better) Translates to: LEEPQILGAQHTLCTGKPSEASS*LLPFQG Trigger: ACCTTGAAATGGGAGAAGCCATGAGCTGGCCTCTGA...GGGCTTCCCTGTACACAGGGTATGCTGGGCTCCCAGGATTTGGGGTTCCTCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR-3UTR GCA 90 bp | CCACCAAGGCCTGTGACTGGGGTCCTGTACCAGAACGCCCATCAGCTGGCTGCCTGGGATTACTTTTGTTaGTGTTACTGTTGCTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: PPRPVTGVLYQNAHQLAAWDYFC*CYCCLL Trigger: CAGCAAGCAACAGTAACAGCAACAAAAGTAATCCCA...GGCAGCCAGCTGATGGGCGTTCTGGTACAGGACCCCAGTCACAGGCCTTGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223244.2 |
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| 3UTR-3UTR GCA 90 bp | AAGTGCCCTCAGACACAGTCCATCTTGGCAGGAAGTCATGGTGGACGAAGCAGGGTCACAGTTCCACCCTaGCCACTGTCTTGTCTCATG | + |
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Preference number: 2 (lower is better) Translates to: KCPQTQSILAGSHGGRSRVTVPP*PLSCLM Trigger: CATGAGACAAGACAGTGGGCAGGGTGGAACTGTGAC...CCTGCTTCGTCCACCATGACTTCCTGCCAAGATGGACTGTGTCTGAGGGCACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223244.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGGGCCTGCAGCCTATCCTGGTCCAGCTTACACTCCAGCGAGAATACTTACATCAGCACTGCAAGGTTaGGGGAGGCAAGAGGATCTA | + |
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Preference number: 2 (lower is better) Translates to: SGPAAYPGPAYTPARILTSALQG*GRQEDL Trigger: TAGATCCTCTTGCCTCCCTCAACCTTGCAGTGCTGA...TGTAAGTATTCTCGCTGGAGTGTAAGCTGGACCAGGATAGGCTGCAGGCCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR-3UTR TCA 90 bp | TTAACCTCTGGGAAGAACATCACACTTCTTCCGGGGCTTCAAAGGCCCCGTTCTTCTCCCATTTCAAGGTaGCATCCCTCCTGCACAGCC | + |
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Preference number: 2 (lower is better) Translates to: LTSGKNITLLPGLQRPRSSPISR*HPSCTA Trigger: GGCTGTGCAGGAGGGATGTCACCTTGAAATGGGAGA...AGAACGGGGCCTTTGAAGCCCCGGAAGAAGTGTGATGTTCTTCCCAGAGGTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR-3UTR GCA 90 bp | TTAACCTCTGGGAAGAACATCACACTTCTTCCGGGGCTTCAAAGGCCCCGTTCTCCATGCAGGCCCAGCTaGCTGCTCAAAAGAGGTGAA | + |
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Preference number: 2 (lower is better) Translates to: LTSGKNITLLPGLQRPRSPCRPS*LLKRGE Trigger: TTCACCTCTTTTGAGCAGGCAGCTGGGCCTGCATGG...AGAACGGGGCCTTTGAAGCCCCGGAAGAAGTGTGATGTTCTTCCCAGAGGTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR-3UTR TCA 90 bp | TGGAGAGAGGGTTCCACAGTCAAACACAAGTTCTACTCTTACAGAAGACCTGGGCTGATTCACAGGCTCTaGGTGGGCCTGCAGCCTATC | + |
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Preference number: 2 (lower is better) Translates to: WREGSTVKHKFYSYRRPGLIHRL*VGLQPI Trigger: GATAGGCTGCAGGCCCACTCAGAGCCTGTGAATCAG...CCCAGGTCTTCTGTAAGAGTAGAACTTGTGTTTGACTGTGGAACCCTCTCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR-3UTR CCA 90 bp | CTGAATGTGGCTTCCTGCACAGGCAGACACACTGGAAGAGAAGTGTCCCACAGGGTTCTCCACGTCCTATaGAGCTGTTCTTGCTGGATT | + |
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Preference number: 2 (lower is better) Translates to: LNVASCTGRHTGREVSHRVLHVL*SCSCWI Trigger: AATCCAGCAAGAACAGCTCCATAGGACGTGGAGAAC...CCTGTGGGACACTTCTCTTCCAGTGTGTCTGCCTGTGCAGGAAGCCACATTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR-3UTR TCA 90 bp | CAGCCTATCCTGGTCCAGCTTACACTCCAGCGAGAATACTTACAGTGCTGTTTTAACAAGAATCAGAAGTaGCTCCCAAAGCCGGCCGGC | + |
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Preference number: 2 (lower is better) Translates to: QPILVQLTLQREYLQCCFNKNQK*LPKPAG Trigger: GCCGGCCGGCTTTGGGAGTCACTTCTGATTCTTGTT...AAAACAGCACTGTAAGTATTCTCGCTGGAGTGTAAGCTGGACCAGGATAGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR-3UTR GCA 90 bp | GCGCTAAAACCACCTGCAATTAAAATGTCTTTCTTGGGCTGGAGAGAGGGTTCCGCAGGCCCAGCTGCCTaGTCAAAAGAGGTGAATGCT | + |
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Preference number: 2 (lower is better) Translates to: ALKPPAIKMSFLGWREGSAGPAA*SKEVNA Trigger: AGCATTCACCTCTTTTGAGCAGGCAGCTGGGCCTGC...GGAACCCTCTCTCCAGCCCAAGAAAGACATTTTAATTGCAGGTGGTTTTAGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR-3UTR TCA 90 bp | GTGGGTTTATTATGCAGGAGGCCAAGGGTTGGGAGTCACAAAATAAACAAACGAACTCCACAGCTTGTGTaGTGGCAAGGGACAACCGCC | + |
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Preference number: 2 (lower is better) Translates to: VGLLCRRPRVGSHKINKRTPQLV*WQGTTA Trigger: GGCGGTTGTCCCTTGCCATCACACAAGCTGTGGAGT...TCGTTTGTTTATTTTGTGACTCCCAACCCTTGGCCTCCTGCATAATAAACCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR-3UTR CCA 90 bp | TTCCTTCCGGGGCTCCTTCCTTACCTGAACAAAAGGCTTCCAAGGTCTGTGAGGACCAAGACACTGAACTaGAAGACAGACGTAGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: FLPGLLPYLNKRLPRSVRTKTLN*KTDVVP Trigger: TGGAACTACGTCTGTCTTCCAGTTCAGTGTCTTGGT...CCTCACAGACCTTGGAAGCCTTTTGTTCAGGTAAGGAAGGAGCCCCGGAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR-3UTR TCA 90 bp | GCGCTAAAACCACCTGCAATTAAAATGTCTTTCTTGGGCTGGAGAGAGGGTTCCCTGATAGGATCTCACTaGTTCACAGGCTCTGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: ALKPPAIKMSFLGWREGSLIGSH*FTGSEW Trigger: CCACTCAGAGCCTGTGAATCAGTGAGATCCTATCAG...GGAACCCTCTCTCCAGCCCAAGAAAGACATTTTAATTGCAGGTGGTTTTAGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR-3UTR GCA 90 bp | TTCCTTCCGGGGCTCCTTCCTTACCTGAACAAAAGGCTTCCAAGGTCTGTGAGGGCTACTCATTCTCTGTaGCCTATTCATGGAAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: FLPGLLPYLNKRLPRSVRATHSL*PIHGKR Trigger: CCTTTTTCCATGAATAGGGCACAGAGAATGAGTAGC...CCTCACAGACCTTGGAAGCCTTTTGTTCAGGTAAGGAAGGAGCCCCGGAAGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR-3UTR CCA 90 bp | AGGAAGGCCGCTACTCATTCTCTGTGCCCTATTCATGGAAAAAGGCAGCCTCTCGATCTAGCTCACCTTTaGCTACTTGATGAGCCAATG | + |
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Preference number: 2 (lower is better) Translates to: RKAATHSLCPIHGKRQPLDLAHL*LLDEPM Trigger: CATTGGCTCATCAAGTAGCCAAAGGTGAGCTAGATC...GAGAGGCTGCCTTTTTCCATGAATAGGGCACAGAGAATGAGTAGCGGCCTTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR CAA 90 bp | TACCAGGCTACAGCGCTAAAACCACCTGCAATTAAAATGTCTTTCTaGGGCTGGAGAGAGGGTTCCACAGTCAAACACAAGTTCTACTCT | + |
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Preference number: 2 (lower is better) Translates to: YQATALKPPAIKMSF*GWREGSTVKHKFYS Trigger: AGAGTAGAACTTGTGTTTGACTGTGGAACCCTCTCTCCAGCCCAAGAAAGACATTTTAATTGCAGGTGGTTTTAGCGCTGTAGCCTGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR-3UTR TCA 90 bp | GTGGGTTTATTATGCAGGAGGCCAAGGGTTGGGAGTCACAAAATAAACAAACGAAGAGCAGCCAAATGGTaGATGGGAGTACTGTTAATT | + |
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Preference number: 2 (lower is better) Translates to: VGLLCRRPRVGSHKINKRRAAKW*MGVLLI Trigger: AATTAACAGTACTCCCATTCACCATTTGGCTGCTCT...TCGTTTGTTTATTTTGTGACTCCCAACCCTTGGCCTCCTGCATAATAAACCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR CCA 72 bp | CTGCCTCAAGGACGCACGGCAGCTTCCTGGCAGTACTaGGTGCCACGGGATGACAGGTCGCTGGGATTACTT | + |
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Preference number: 3 (lower is better) Translates to: LPQGRTAASWQY*VPRDDRSLGLL Trigger: AAGTAATCCCAGCGACCTGTCATCCCGTGGCACCCAGTACTGCCAGGAAGCTGCCGTGCGTCCTTGAGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223244.2 |
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| 3UTR GCA 72 bp | CAGGCAGGCCCTGGCGCTGTACCTCAGCTGATAAAGTaGTTGCCTGGTGTGACCAATGCCCTGGAGCCTGAT | + |
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Preference number: 3 (lower is better) Translates to: QAGPGAVPQLIK*LPGVTNALEPD Trigger: ATCAGGCTCCAGGGCATTGGTCACACCAGGCAAGCACTTTATCAGCTGAGGTACAGCGCCAGGGCCTGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR GCA 72 bp | CTCAAGGACGCACGGCAGCTTCCTGGCAGTACTGGGTaGCACGGGATGACAGGTCGCTGGGATTACTTTTGT | + |
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Preference number: 3 (lower is better) Translates to: LKDARQLPGSTG*HGMTGRWDYFC Trigger: ACAAAAGTAATCCCAGCGACCTGTCATCCCGTGGCACCCAGTACTGCCAGGAAGCTGCCGTGCGTCCTTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223244.2 |
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| 3UTR GCA 72 bp | GACTGGGGTCCTGTACCAGAACGCCCATCAGCTGGCTaGCAACAGGTGGTTCTCAGACACTGTCACAGTTCC | + |
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Preference number: 3 (lower is better) Translates to: DWGPVPERPSAG*QQVVLRHCHSS Trigger: GGAACTGTGACAGTGTCTGAGAACCACCTGTTGGCAGCCAGCTGATGGGCGTTCTGGTACAGGACCCCAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223244.2 |
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| 3UTR CCA 72 bp | TTCAAGGTGACATCCCTCCTGCACAGCCTCGCCACCTaGCTCAAGGACACACTGTACAGGCGCTCCCTAGTA | + |
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Preference number: 3 (lower is better) Translates to: FKVTSLLHSLAT*LKDTLYRRSLV Trigger: TACTAGGGAGCGCCTGTACAGTGTGTCCTTGAGCCAGGTGGCGAGGCTGTGCAGGAGGGATGTCACCTTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR TCA 72 bp | AAGGCCCCGTTCTCTGTGGCTCTGATAGGATCTCACTaGTTCACAGGCTCTGAGTGGGCCTGCAGCCTATCC | + |
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Preference number: 3 (lower is better) Translates to: KAPFSVALIGSH*FTGSEWACSLS Trigger: GGATAGGCTGCAGGCCCACTCAGAGCCTGTGAATCAGTGAGATCCTATCAGAGCCACAGAGAACGGGGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR TCA 72 bp | CAGAAGACCTGGGCTCAGTGGCCCTGCACCCAAGTCTaGTGGTTCCCGGCTGTCTTTATCTCTACTTCCACG | + |
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Preference number: 3 (lower is better) Translates to: QKTWAQWPCTQV*WFPAVFISTST Trigger: CGTGGAAGTAGAGATAAAGACAGCCGGGAACCATCAGACTTGGGTGCAGGGCCACTGAGCCCAGGTCTTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR GCA 72 bp | CCACCCTACCTCAGGAAGGCCGCTACTCATTCTCTGTaGCCTATTCATGGAAAAAGGCAGCCTCTCTCCCGC | + |
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Preference number: 3 (lower is better) Translates to: PPYLRKAATHSL*PIHGKRQPLSR Trigger: GCGGGAGAGAGGCTGCCTTTTTCCATGAATAGGGCACAGAGAATGAGTAGCGGCCTTCCTGAGGTAGGGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR TCA 72 bp | TTGTGTGATGGCAAGGGACAACCGCCGACTGATGTGTaGCCCACAGCCTGGCACTCATGCTCAGGTAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: LCDGKGQPPTDV*PTAWHSCSGRK Trigger: TTTCCTACCTGAGCATGAGTGCCAGGCTGTGGGTCACACATCAGTCGGCGGTTGTCCCTTGCCATCACACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR TCA 72 bp | CACGGCAGCTTCCTGGCAGTACTGGGTGCCACGGGATaGCAGGTCGCTGGGATTACTTTTGTTGCTGTTACT | + |
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Preference number: 3 (lower is better) Translates to: HGSFLAVLGATG*QVAGITFVAVT Trigger: AGTAACAGCAACAAAAGTAATCCCAGCGACCTGTCATCCCGTGGCACCCAGTACTGCCAGGAAGCTGCCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223244.2 |
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| 3UTR GCA 72 bp | TCTGACTGGGTCCCTAGTGAAATGAGGAAGGCGGCATaGTTAGGCTGTGGCTCTCCTCCCCTTCTTGAGGAA | + |
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Preference number: 3 (lower is better) Translates to: SDWVPSEMRKAA*LGCGSPPLLEE Trigger: TTCCTCAAGAAGGGGAGGAGAGCCACAGCCTAAGCATGCCGCCTTCCTCATTTCACTAGGGACCCAGTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR GCA 72 bp | CTGAACAAAAGGCTTCCAAGGTCTGTGAGGGACCCATaGAGGCCCAGCTGCCTGCTCAAAAGAGGTGAATGC | + |
|
Preference number: 3 (lower is better) Translates to: LNKRLPRSVRDP*RPSCLLKRGEC Trigger: GCATTCACCTCTTTTGAGCAGGCAGCTGGGCCTGCATGGGTCCCTCACAGACCTTGGAAGCCTTTTGTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR CCA 72 bp | CGGATCCTCCACACCAGTCTCTGGATTGATGAGCCCTaGGGAAGTCCCACCAAGACACTGAACTGGAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: RILHTSLWIDEP*GSPTKTLNWKT Trigger: TGTCTTCCAGTTCAGTGTCTTGGTGGGACTTCCCCAGGGCTCATCAATCCAGAGACTGGTGTGGAGGATCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR CCA 72 bp | GGTGATGGTGGAAATCGGATCCTCCACACCAGTCTCTaGATTGATGAGCCCTGGGGAAGTCCCACCAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: GDGGNRILHTSL*IDEPWGSPTKT Trigger: TGTCTTGGTGGGACTTCCCCAGGGCTCATCAATCCAGAGACTGGTGTGGAGGATCCGATTTCCACCATCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR TCA 72 bp | ACAGGCAGACACACTGGAAGAGAAGTGTCCCACAGGTaGTGGTGGAAATCGGATCCTCCACACCAGTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: TGRHTGREVSHR*WWKSDPPHQSL Trigger: CAGAGACTGGTGTGGAGGATCCGATTTCCACCATCACCTGTGGGACACTTCTCTTCCAGTGTGTCTGCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR CCA 72 bp | CCTGGCAGTACTGGGTGCCACGGGATGACAGGTCGCTaGGATTACTTTTGTTGCTGTTACTGTTGCTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PGSTGCHGMTGR*DYFCCCYCCLL Trigger: CAGCAAGCAACAGTAACAGCAACAAAAGTAATCCCAGCGACCTGTCATCCCGTGGCACCCAGTACTGCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223244.2 |
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| 3UTR TCA 72 bp | TGGTGGCAGATAGCCAACATCTCAGCACTGCAAGGTTaGGGGAGGCAAGAGGATCTAGCTCACCTTTGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: WWQIANISALQG*GRQEDLAHLWL Trigger: TAGCCAAAGGTGAGCTAGATCCTCTTGCCTCCCTCAACCTTGCAGTGCTGAGATGTTGGCTATCTGCCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR CCA 72 bp | GATGAGCCCTGGGGAAGTCCCACCAAGACACTGAACTaGAAGACAGACGTAGTTCCAGTGATTTCCTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: DEPWGSPTKTLN*KTDVVPVISSE Trigger: CTCAGAGGAAATCACTGGAACTACGTCTGTCTTCCAGTTCAGTGTCTTGGTGGGACTTCCCCAGGGCTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR CCA 72 bp | CTGTCACAGTTCCACCCTGCCCACTGTCTTGTCTCATaGCTGACATTTAAAGAGCTCTGCCTCAAGGACGCA | + |
|
Preference number: 3 (lower is better) Translates to: LSQFHPAHCLVS*LTFKELCLKDA Trigger: TGCGTCCTTGAGGCAGAGCTCTTTAAATGTCAGCCATGAGACAAGACAGTGGGCAGGGTGGAACTGTGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223244.2 |
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| 3UTR-3UTR CAA 90 bp | TTAACCTCTGGGAAGAACATCACACTTCTTCCGGGGCTTCAAAGGCCCCGTTCTCAGCTGATAAAGTGCTaGCCTGGTGTGACCAATGCC | + |
|
Preference number: 3 (lower is better) Translates to: LTSGKNITLLPGLQRPRSQLIKC*PGVTNA Trigger: GGCATTGGTCACACCAGGCAAGCACTTTATCAGCTG...AGAACGGGGCCTTTGAAGCCCCGGAAGAAGTGTGATGTTCTTCCCAGAGGTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR CCA 72 bp | GTTAATTTCTCAAAATCAGAGGACACAGGCAGGCCCTaGCGCTGTACCTCAGCTGATAAAGTGCTTGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VNFSKSEDTGRP*RCTSADKVLAW Trigger: CCAGGCAAGCACTTTATCAGCTGAGGTACAGCGCCAGGGCCTGCCTGTGTCCTCTGATTTTGAGAAATTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR CCA 72 bp | TTCATGAGAAAGAAAAACGCGTCAGAGGCCAGCTCATaGCTTCTCCCATTTCAAGGTGACATCCCTCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: FMRKKNASEASS*LLPFQGDIPPA Trigger: TGCAGGAGGGATGTCACCTTGAAATGGGAGAAGCCATGAGCTGGCCTCTGACGCGTTTTTCTTTCTCATGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR-3UTR CAA 90 bp | TTAACCTCTGGGAAGAACATCACACTTCTTCCGGGGCTTCAAAGGCCCCGTTCTCCTATGGAGCTGTTCTaGCTGGATTTAATGACTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LTSGKNITLLPGLQRPRSPMELF*LDLMTH Trigger: GTGAGTCATTAAATCCAGCAAGAACAGCTCCATAGG...AGAACGGGGCCTTTGAAGCCCCGGAAGAAGTGTGATGTTCTTCCCAGAGGTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR-3UTR CAA 90 bp | TGGAGAGAGGGTTCCACAGTCAAACACAAGTTCTACTCTTACAGAAGACCTGGGAAGTCACTCCACAGCTaGTGTGATGGCAAGGGACAA | + |
|
Preference number: 3 (lower is better) Translates to: WREGSTVKHKFYSYRRPGKSLHS*CDGKGQ Trigger: TTGTCCCTTGCCATCACACAAGCTGTGGAGTGACTT...CCCAGGTCTTCTGTAAGAGTAGAACTTGTGTTTGACTGTGGAACCCTCTCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR-3UTR CAA 90 bp | TGCCCTCAGACACAGTCCATCTTGGCAGGAAGTCATGGTGGACGAAGCAGGAAATCGCTGGGATTACTTTaGTTGCTGTTACTGTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: CPQTQSILAGSHGGRSRKSLGLL*LLLLLL Trigger: AAGCAACAGTAACAGCAACAAAAGTAATCCCAGCGA...TTTCCTGCTTCGTCCACCATGACTTCCTGCCAAGATGGACTGTGTCTGAGGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223244.2 |
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| 3UTR GCA 72 bp | CCATGCAGGCCCAGCTGCCTGCTCAAAAGAGGTGAATaGTCAATTAATGAGGTAAAAACCTTCAGACTCGTG | + |
|
Preference number: 3 (lower is better) Translates to: PCRPSCLLKRGE*SINEVKTFRLV Trigger: CACGAGTCTGAAGGTTTTTACCTCATTAATTGAGCATTCACCTCTTTTGAGCAGGCAGCTGGGCCTGCATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR TCA 72 bp | CTAGTAGCCGAAAGGAACTTCAGAGCAGCCAAATGGTaGATGGGAGTACTGTTAATTTCTCAAAATCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LVAERNFRAAKW*MGVLLISQNQR Trigger: CCTCTGATTTTGAGAAATTAACAGTACTCCCATTCACCATTTGGCTGCTCTGAAGTTCCTTTCGGCTACTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR CCA 72 bp | CTAAAACCACCTGCAATTAAAATGTCTTTCTTGGGCTaGAGAGAGGGTTCCACAGTCAAACACAAGTTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: LKPPAIKMSFLG*REGSTVKHKFY Trigger: GTAGAACTTGTGTTTGACTGTGGAACCCTCTCTCCAGCCCAAGAAAGACATTTTAATTGCAGGTGGTTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| CDS-3UTR GCA 90 bp | CCGCTTGCTGCCAGGAGGCCCAGCGCAAGCATCACAGCAACAGGGCACCACCACACCAGCGCGTCCAGCTaGTCCGCCTGGCCGCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLAARRPSASITATGHHHTSASS*SAWPPE Trigger: CTCGGGCGGCCAGGCGGAGCAGCTGGACGCGCTGGT...GTGGTGGTGCCCTGTTGCTGTGATGCTTGCGCTGGGCCTCCTGGCAGCAAGCGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| CDS-3UTR GCA 90 bp | CAAGGACGCACGGCAGCTTCCTGGCAGTACTGGGTGCCACGGGATGACAGGTCGACCAGCGCGTCCAGCTaGTCCGCCTGGCCGCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: QGRTAASWQYWVPRDDRSTSASS*SAWPPE Trigger: CTCGGGCGGCCAGGCGGAGCAGCTGGACGCGCTGGT...CGACCTGTCATCCCGTGGCACCCAGTACTGCCAGGAAGCTGCCGTGCGTCCTTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223244.2 |
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| CDS-3UTR TCA 90 bp | TTCCTTCCGGGGCTCCTTCCTTACCTGAACAAAAGGCTTCCAAGGTCTGTGAGGGCTCGGGCGTCCCCTTaGGGAACACCACCACCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLPGLLPYLNKRLPRSVRARASP*GTPPPC Trigger: ACAAGGTGGTGGTGTTCCTCAAGGGGACGCCCGAGC...CCTCACAGACCTTGGAAGCCTTTTGTTCAGGTAAGGAAGGAGCCCCGGAAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| CDS-3UTR TCA 90 bp | TTGTTTTGTTTTAGCCCAGGTGCGTCCGGAACTTCAGCTGTAGCTCAAGCTAGCGCTCGGGCGTCCCCTTaGGGAACACCACCACCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LFCFSPGASGTSAVAQASARASP*GTPPPC Trigger: ACAAGGTGGTGGTGTTCCTCAAGGGGACGCCCGAGC...GCTAGCTTGAGCTACAGCTGAAGTTCCGGACGCACCTGGGCTAAAACAAAACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000223244.2 |
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| 3UTR CAA 72 bp | ATGGTGGCAGATAGCCAACATCTCAGCACTGCAAGGTaGAGGGAGGCAAGAGGATCTAGCTCACCTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MVADSQHLSTAR*REARGSSSPLA Trigger: AGCCAAAGGTGAGCTAGATCCTCTTGCCTCCCTCAACCTTGCAGTGCTGAGATGTTGGCTATCTGCCACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR CAA 72 bp | AAGCAGCCAGAATGGAAAAGCAAGTCACTCCACAGCTaGTGTGATGGCAAGGGACAACCGCCGACTGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: KQPEWKSKSLHS*CDGKGQPPTDV Trigger: CACATCAGTCGGCGGTTGTCCCTTGCCATCACACAAGCTGTGGAGTGACTTGCTTTTCCATTCTGGCTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR CAA 72 bp | AACCTTCAGACTCGTGTGCCTTTTCTTCTTTCAGCCTaGACACTAGTCACTGGTGAGGGCTGTCATCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NLQTRVPFLLSA*TLVTGEGCHPL Trigger: CAGAGGATGACAGCCCTCACCAGTGACTAGTGTCAAGGCTGAAAGAAGAAAAGGCACACGAGTCTGAAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| 3UTR CAA 72 bp | TCATCTACTGTCCCTAGAGGGCTGGTCCGATGCTGTTaGTACAAAGGAACTTGCGTGTCACTGTTTAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSTVPRGLVRCC*YKGTCVSLFNP Trigger: AGGATTAAACAGTGACACGCAAGTTCCTTTGTACAAACAGCATCGGACCAGCCCTCTAGGGACAGTAGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| CDS-3UTR CAA 90 bp | GACGCACGGCAGCTTCCTGGCAGTACTGGGTGCCACGGGATGACAGGTCGCTGGAGGAACACCACCACCTaGTCCTTCTTCACCAGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: DARQLPGSTGCHGMTGRWRNTTT*SFFTSA Trigger: CGCGCTGGTGAAGAAGGACAAGGTGGTGGTGTTCCT...CCAGCGACCTGTCATCCCGTGGCACCCAGTACTGCCAGGAAGCTGCCGTGCGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223244.2 |
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| CDS-3UTR CAA 90 bp | CATGGTGGACGAAGCAGGAAAGGCAGGACACATGGTAGCACTCACTTCACCCAATGCTCGGGCGTCCCCTaGAGGAACACCACCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HGGRSRKGRTHGSTHFTQCSGVP*RNTTTL Trigger: CAAGGTGGTGGTGTTCCTCAAGGGGACGCCCGAGCA...TTGGGTGAAGTGAGTGCTACCATGTGTCCTGCCTTTCCTGCTTCGTCCACCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223244.2 |
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| CDS-3UTR CAA 90 bp | TTAACCTCTGGGAAGAACATCACACTTCTTCCGGGGCTTCAAAGGCCCCGTTCTTGCTCGGGCGTCCCCTaGAGGAACACCACCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LTSGKNITLLPGLQRPRSCSGVP*RNTTTL Trigger: CAAGGTGGTGGTGTTCCTCAAGGGGACGCCCGAGCA...AGAACGGGGCCTTTGAAGCCCCGGAAGAAGTGTGATGTTCTTCCCAGAGGTTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| CDS-3UTR CAA 90 bp | CAGCCTATCCTGGTCCAGCTTACACTCCAGCGAGAATACTTACAGTGCTGTTTTAGGAACACCACCACCTaGTCCTTCTTCACCAGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: QPILVQLTLQREYLQCCFRNTTT*SFFTSA Trigger: CGCGCTGGTGAAGAAGGACAAGGTGGTGGTGTTCCT...AAAACAGCACTGTAAGTATTCTCGCTGGAGTGTAAGCTGGACCAGGATAGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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| CDS-3UTR CAA 90 bp | CAGCCTATCCTGGTCCAGCTTACACTCCAGCGAGAATACTTACAGTGCTGTTTTGTAGTCTTTAATACCTaGCCTCAGCTCCGGGTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: QPILVQLTLQREYLQCCFVVFNT*PQLRVV Trigger: GACGACCCGGAGCTGAGGCAAGGTATTAAAGACTAC...AAAACAGCACTGTAAGTATTCTCGCTGGAGTGTAAGCTGGACCAGGATAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021522.5 |
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