Pregenerated sensors for GLRX3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031068Ensembl transcript IDs: ENSMUST00000064404.8, ENSMUST00000211496.2, ENSMUST00000211769.2
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | AGAGGGCACTATCCTGCCTGGAGGAGGAGCTGCCCCAACATCTGCTaGTTACACCCTCAACACACTGAGCAAGGTGGAGAGCAGTGGGGT | + |
Preference number: 1 (lower is better) Translates to: RGHYPAWRRSCPNIC*LHPQHTEQGGEQWG Trigger: ACCCCACTGCTCTCCACCTTGCTCAGTGTGTTGAGGGTGTAACCAGCAGATGTTGGGGCAGCTCCTCCTCCAGGCAGGATAGTGCCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR TCA 90 bp | TTGGCGGGGTATGTCTCCACTCAAGAGGCAGAGGTAGGCAATCTCTaGGTTAGAAGCCAGTTTGGACTACAGAAGGAGTTCCAGGACAGC | + |
Preference number: 1 (lower is better) Translates to: LAGYVSTQEAEVGNL*VRSQFGLQKEFQDS Trigger: GCTGTCCTGGAACTCCTTCTGTAGTCCAAACTGGCTTCTAACTCAGAGATTGCCTACCTCTGCCTCTTGAGTGGAGACATACCCCGCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR CCA 90 bp | GCACTCTGCTGCGTCACAGATTTACAGCTAAGCTATGGTGGGAAGTaGGTGAACTCTACGGAGGAAGAATTCTTCCCTCTGAGACCCCTG | + |
Preference number: 1 (lower is better) Translates to: ALCCVTDLQLSYGGK*VNSTEEEFFPLRPL Trigger: CAGGGGTCTCAGAGGGAAGAATTCTTCCTCCGTAGAGTTCACCCACTTCCCACCATAGCTTAGCTGTAAATCTGTGACGCAGCAGAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR CCA 90 bp | GGAATCATACAGTCATACAGTTCCCAAAAGGTGTCACCGACTTCCTaGCCTCCTAAGACCCTTTATCTGGCTCAGGCATGGCCCGTGAAT | + |
Preference number: 1 (lower is better) Translates to: GIIQSYSSQKVSPTS*PPKTLYLAQAWPVN Trigger: ATTCACGGGCCATGCCTGAGCCAGATAAAGGGTCTTAGGAGGCCAGGAAGTCGGTGACACCTTTTGGGAACTGTATGACTGTATGATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR TCA 90 bp | CAACACACTGAGCAAGGTGGAGAGCAGTGGGGTAGAGAAGGGTCATaGAAGCTGCAGTTTACAGCAACCAACACAGCTAATAAACACAGT | + |
Preference number: 1 (lower is better) Translates to: QHTEQGGEQWGREGS*KLQFTATNTANKHS Trigger: ACTGTGTTTATTAGCTGTGTTGGTTGCTGTAAACTGCAGCTTTCATGACCCTTCTCTACCCCACTGCTCTCCACCTTGCTCAGTGTGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR CCA 90 bp | AAGACTGAAGGGTGCTTCCCCTTTGGTCGCTACTGCTCCCTCTTCTaGATATTGGTACAACATCTGGCTTTCTGCAGGATAAACTTTTGG | + |
Preference number: 1 (lower is better) Translates to: KTEGCFPFGRYCSLF*ILVQHLAFCRINFW Trigger: CCAAAAGTTTATCCTGCAGAAAGCCAGATGTTGTACCAATATCCAGAAGAGGGAGCAGTAGCGACCAAAGGGGAAGCACCCTTCAGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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3UTR TCA 90 bp | TGTTCACAATGTAGGAGCAGCAGCACCAACTTGCAGCATGTGTTCTaGACAGGAATCATACAGTCATACAGTTCCCAAAAGGTGTCACCG | + |
Preference number: 1 (lower is better) Translates to: CSQCRSSSTNLQHVF*TGIIQSYSSQKVSP Trigger: CGGTGACACCTTTTGGGAACTGTATGACTGTATGATTCCTGTTCAGAACACATGCTGCAAGTTGGTGCTGCTGCTCCTACATTGTGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR TCA 90 bp | GAAGCCAATCAGAATTACCCTATGGAATGTGTACTAATGAACAGATaGAAAGCTGCACCCTGCAGAAAACACAAAGTGACAGTCCCCCAA | + |
Preference number: 1 (lower is better) Translates to: EANQNYPMECVLMNR*KAAPCRKHKVTVPQ Trigger: TTGGGGGACTGTCACTTTGTGTTTTCTGCAGGGTGCAGCTTTTCATCTGTTCATTAGTACACATTCCATAGGGTAATTCTGATTGGCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR GCA 90 bp | AAACTACATCTCTACCTTATTCTTGCCCATACCTTGTTGTCAAAGTaGCATCAAACTTTGCACTTGACAGGAAATAAAGCCTGCCCTGTG | + |
Preference number: 1 (lower is better) Translates to: KLHLYLILAHTLLSK*HQTLHLTGNKACPV Trigger: CACAGGGCAGGCTTTATTTCCTGTCAAGTGCAAAGTTTGATGGCACTTTGACAACAAGGTATGGGCAAGAATAAGGTAGAGATGTAGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR TCA 90 bp | ACCATTTACCAAGTTCCTAAAATAAACAGAGCATCAGGAAGGATTTaGAGTAATAATGTAGGGCCGGCTTTGATGGCTCATACCCGTAAT | + |
Preference number: 1 (lower is better) Translates to: TIYQVPKINRASGRI*SNNVGPALMAHTRN Trigger: ATTACGGGTATGAGCCATCAAAGCCGGCCCTACATTATTACTTCAAATCCTTCCTGATGCTCTGTTTATTTTAGGAACTTGGTAAATGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR-3UTR GCA 90 bp | CCTCAGCCAAGGGCCCCAAGTCTAATGGCTCCTCAGCCCATCTGCAGCCTGTCAGCAGCAGCACCAACTTaGAGCATGTGTTCTGAACAG | + |
Preference number: 2 (lower is better) Translates to: PQPRAPSLMAPQPICSLSAAAPT*SMCSEQ Trigger: CTGTTCAGAACACATGCTGCAAGTTGGTGCTGCTGC...TGACAGGCTGCAGATGGGCTGAGGAGCCATTAGACTTGGGGCCCTTGGCTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR-3UTR CCA 90 bp | ACACACCCTCAGCCAAGGGCCCCAAGTCTAATGGCTCCTCAGCCCATCTGCAGCGTGTCACCGACTTCCTaGCCTCCTAAGACCCTTTAT | + |
Preference number: 2 (lower is better) Translates to: THPQPRAPSLMAPQPICSVSPTS*PPKTLY Trigger: ATAAAGGGTCTTAGGAGGCCAGGAAGTCGGTGACAC...GCTGCAGATGGGCTGAGGAGCCATTAGACTTGGGGCCCTTGGCTGAGGGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR-3UTR TCA 90 bp | CCTCAGCCAAGGGCCCCAAGTCTAATGGCTCCTCAGCCCATCTGCAGCCTGTCAGGTAGAGAAGGGTCATaGAAGCTGCAGTTTACAGCA | + |
Preference number: 2 (lower is better) Translates to: PQPRAPSLMAPQPICSLSGREGS*KLQFTA Trigger: TGCTGTAAACTGCAGCTTTCATGACCCTTCTCTACC...TGACAGGCTGCAGATGGGCTGAGGAGCCATTAGACTTGGGGCCCTTGGCTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR-3UTR GCA 90 bp | ACACACCCTCAGCCAAGGGCCCCAAGTCTAATGGCTCCTCAGCCCATCTGCAGCACAGGAAATAAAGCCTaGCCTGTGCCTTTACACCTG | + |
Preference number: 2 (lower is better) Translates to: THPQPRAPSLMAPQPICSTGNKA*PVPLHL Trigger: CAGGTGTAAAGGCACAGGGCAGGCTTTATTTCCTGT...GCTGCAGATGGGCTGAGGAGCCATTAGACTTGGGGCCCTTGGCTGAGGGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR-3UTR TCA 90 bp | TCCCCTTTGGTCGCTACTGCTCCCTCTTCTGGATATTGGTACAACATCTGGCTTGGTACAGGAGTTAGCTaGGCACTAAAGCACACTGCT | + |
Preference number: 2 (lower is better) Translates to: SPLVATAPSSGYWYNIWLGTGVS*ALKHTA Trigger: AGCAGTGTGCTTTAGTGCTCAGCTAACTCCTGTACC...AAGCCAGATGTTGTACCAATATCCAGAAGAGGGAGCAGTAGCGACCAAAGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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3UTR CAA 90 bp | GAAGGGTGCTTCCCCTTTGGTCGCTACTGCTCCCTCTTCTGGATATaGGTACAACATCTGGCTTTCTGCAGGATAAACTTTTGGGTTGCA | + |
Preference number: 2 (lower is better) Translates to: EGCFPFGRYCSLFWI*VQHLAFCRINFWVA Trigger: TGCAACCCAAAAGTTTATCCTGCAGAAAGCCAGATGTTGTACCAATATCCAGAAGAGGGAGCAGTAGCGACCAAAGGGGAAGCACCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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3UTR-3UTR TCA 90 bp | GCCCGTGAATCGTTCAGACAAGAACAAGCTCAAGAACATCTCGGATCTAAAGACGTGTGCACCCAGATATaGAAGGAGCAAGTGCGCACT | + |
Preference number: 2 (lower is better) Translates to: ARESFRQEQAQEHLGSKDVCTQI*KEQVRT Trigger: AGTGCGCACTTGCTCCTTTCATATCTGGGTGCACAC...GTCTTTAGATCCGAGATGTTCTTGAGCTTGTTCTTGTCTGAACGATTCACGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR-3UTR CCA 90 bp | CTAAGCAGCCAACTTACGGAAATCTTCCTGCCTTTGTGTGTCAAATGTTGGGATTATCTGGCTCAGGCATaGCCCGTGAATCGTTCAGAC | + |
Preference number: 2 (lower is better) Translates to: LSSQLTEIFLPLCVKCWDYLAQA*PVNRSD Trigger: GTCTGAACGATTCACGGGCCATGCCTGAGCCAGATA...ATCCCAACATTTGACACACAAAGGCAGGAAGATTTCCGTAAGTTGGCTGCTTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR-3UTR GCA 90 bp | TTCCCCTTTGGTCGCTACTGCTCCCTCTTCTGGATATTGGTACAACATCTGGCTGATAAACTTTTGGGTTaGATTTTCCAGGCTGTGAGG | + |
Preference number: 2 (lower is better) Translates to: FPFGRYCSLFWILVQHLADKLLG*IFQAVR Trigger: CCTCACAGCCTGGAAAATGCAACCCAAAAGTTTATC...AGCCAGATGTTGTACCAATATCCAGAAGAGGGAGCAGTAGCGACCAAAGGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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3UTR-3UTR GCA 90 bp | AAGTGGGTGAACTCTACGGAGGAAGAATTCTTCCCTCTGAGACCCCTGGAGAGCAACAAAAAGTACCAGTaGTCTAACAGAAGCCAATCA | + |
Preference number: 2 (lower is better) Translates to: KWVNSTEEEFFPLRPLESNKKYQ*SNRSQS Trigger: TGATTGGCTTCTGTTAGAGCACTGGTACTTTTTGTT...GCTCTCCAGGGGTCTCAGAGGGAAGAATTCTTCCTCCGTAGAGTTCACCCACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR-3UTR CCA 90 bp | CACTTAGCTTGTTGCTTCAGGGCTCCTAAAAGCTGCAGTGCTTTCTTTTCTCCAATTTACAAAAGAAGTTaGGCCCCAAAGGATGGAGAT | + |
Preference number: 2 (lower is better) Translates to: HLACCFRAPKSCSAFFSPIYKRS*APKDGD Trigger: ATCTCCATCCTTTGGGGCCCAACTTCTTTTGTAAAT...TGGAGAAAAGAAAGCACTGCAGCTTTTAGGAGCCCTGAAGCAACAAGCTAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR CAA 90 bp | CATTTACTAAGAAAACTACATCTCTACCTTATTCTTGCCCATACCTaGTTGTCAAAGTGCCATCAAACTTTGCACTTGACAGGAAATAAA | + |
Preference number: 2 (lower is better) Translates to: HLLRKLHLYLILAHT*LSKCHQTLHLTGNK Trigger: TTTATTTCCTGTCAAGTGCAAAGTTTGATGGCACTTTGACAACAAGGTATGGGCAAGAATAAGGTAGAGATGTAGTTTTCTTAGTAAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR CCA 72 bp | CCCTCTGAGACCCCTGGAGAGCTTCCCTCTCCTCTGTaGGCAGGCAGCTCACACATCTTCTCTAGCTCACAC | + |
Preference number: 3 (lower is better) Translates to: PSETPGELPSPL*AGSSHIFSSSH Trigger: GTGTGAGCTAGAGAAGATGTGTGAGCTGCCTGCCCACAGAGGAGAGGGAAGCTCTCCAGGGGTCTCAGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR GCA 72 bp | CACTATCCTGCCTGGAGGAGGAGCTGCCCCAACATCTaGTGGTTACACCCTCAACACACTGAGCAAGGTGGA | + |
Preference number: 3 (lower is better) Translates to: HYPAWRRSCPNI*WLHPQHTEQGG Trigger: TCCACCTTGCTCAGTGTGTTGAGGGTGTAACCAGCAGATGTTGGGGCAGCTCCTCCTCCAGGCAGGATAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR CCA 72 bp | TATCCTGCCTGGAGGAGGAGCTGCCCCAACATCTGCTaGTTACACCCTCAACACACTGAGCAAGGTGGAGAG | + |
Preference number: 3 (lower is better) Translates to: YPAWRRSCPNIC*LHPQHTEQGGE Trigger: CTCTCCACCTTGCTCAGTGTGTTGAGGGTGTAACCAGCAGATGTTGGGGCAGCTCCTCCTCCAGGCAGGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR-3UTR CAA 90 bp | CCTCAGCCAAGGGCCCCAAGTCTAATGGCTCCTCAGCCCATCTGCAGCCTGTCAGAGTTAGAAGCCAGTTaGGACTACAGAAGGAGTTCC | + |
Preference number: 3 (lower is better) Translates to: PQPRAPSLMAPQPICSLSELEAS*DYRRSS Trigger: GGAACTCCTTCTGTAGTCCAAACTGGCTTCTAACTC...TGACAGGCTGCAGATGGGCTGAGGAGCCATTAGACTTGGGGCCCTTGGCTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR-3UTR CAA 90 bp | AGGGCCCCAAGTCTAATGGCTCCTCAGCCCATCTGCAGCCTGTCAGGGGTGCCTCTTGCCCATACCTTGTaGTCAAAGTGCCATCAAACT | + |
Preference number: 3 (lower is better) Translates to: RAPSLMAPQPICSLSGVPLAHTL*SKCHQT Trigger: AGTTTGATGGCACTTTGACAACAAGGTATGGGCAAG...AGGCACCCCTGACAGGCTGCAGATGGGCTGAGGAGCCATTAGACTTGGGGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR CCA 72 bp | AGAAACAATCAGAAGGCCAGAGGGCACTATCCTGCCTaGAGGAGGAGCTGCCCCAACATCTGCTGGTTACAC | + |
Preference number: 3 (lower is better) Translates to: RNNQKARGHYPA*RRSCPNICWLH Trigger: GTGTAACCAGCAGATGTTGGGGCAGCTCCTCCTCCAGGCAGGATAGTGCCCTCTGGCCTTCTGATTGTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR TCA 72 bp | AGTCTCATTCTCCCTCTCCGGGTTTGTTTCTCCTCCTaGCGTAACACCTGCAGGGACCTCTCACTCCATGTC | + |
Preference number: 3 (lower is better) Translates to: SLILPLRVCFSS*RNTCRDLSLHV Trigger: GACATGGAGTGAGAGGTCCCTGCAGGTGTTACGTCAGGAGGAGAAACAAACCCGGAGAGGGAGAATGAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR-3UTR CAA 90 bp | CCTCAGCCAAGGGCCCCAAGTCTAATGGCTCCTCAGCCCATCTGCAGCCTGTCACATCAAACTTTGCACTaGACAGGAAATAAAGCCTGC | + |
Preference number: 3 (lower is better) Translates to: PQPRAPSLMAPQPICSLSHQTLH*TGNKAC Trigger: GCAGGCTTTATTTCCTGTCAAGTGCAAAGTTTGATG...TGACAGGCTGCAGATGGGCTGAGGAGCCATTAGACTTGGGGCCCTTGGCTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR CCA 72 bp | CAGTCATACAGTTCCCAAAAGGTGTCACCGACTTCCTaGCCTCCTAAGACCCTTTATCTGGCTCAGGCATGG | + |
Preference number: 3 (lower is better) Translates to: QSYSSQKVSPTS*PPKTLYLAQAW Trigger: CCATGCCTGAGCCAGATAAAGGGTCTTAGGAGGCCAGGAAGTCGGTGACACCTTTTGGGAACTGTATGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR-3UTR CAA 90 bp | TTCCAGGCTGTGAGGCGTCCTCTGGCCAGTGAGGGGAGCTATTGGACTGGTACAAGTCTGAAGAGTTTATaGCCTTCTCTGCTTCGTAGA | + |
Preference number: 3 (lower is better) Translates to: FQAVRRPLASEGSYWTGTSLKSL*PSLLRR Trigger: TCTACGAAGCAGAGAAGGCAATAAACTCTTCAGACT...TGTACCAGTCCAATAGCTCCCCTCACTGGCCAGAGGACGCCTCACAGCCTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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3UTR CCA 72 bp | GGGTGCTTCCCCTTTGGTCGCTACTGCTCCCTCTTCTaGATATTGGTACAACATCTGGCTTTCTGCAGGATA | + |
Preference number: 3 (lower is better) Translates to: GCFPFGRYCSLF*ILVQHLAFCRI Trigger: TATCCTGCAGAAAGCCAGATGTTGTACCAATATCCAGAAGAGGGAGCAGTAGCGACCAAAGGGGAAGCACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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3UTR TCA 72 bp | GAGCAAGGTGGAGAGCAGTGGGGTAGAGAAGGGTCATaGAAGCTGCAGTTTACAGCAACCAACACAGCTAAT | + |
Preference number: 3 (lower is better) Translates to: EQGGEQWGREGS*KLQFTATNTAN Trigger: ATTAGCTGTGTTGGTTGCTGTAAACTGCAGCTTTCATGACCCTTCTCTACCCCACTGCTCTCCACCTTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR GCA 72 bp | ACAACATCTGGCTTTCTGCAGGATAAACTTTTGGGTTaGATTTTCCAGGCTGTGAGGCGTCCTCTGGCCAGT | + |
Preference number: 3 (lower is better) Translates to: TTSGFLQDKLLG*IFQAVRRPLAS Trigger: ACTGGCCAGAGGACGCCTCACAGCCTGGAAAATGCAACCCAAAAGTTTATCCTGCAGAAAGCCAGATGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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3UTR GCA 72 bp | ATGAAGACTGAAGGGTGCTTCCCCTTTGGTCGCTACTaGTCCCTCTTCTGGATATTGGTACAACATCTGGCT | + |
Preference number: 3 (lower is better) Translates to: MKTEGCFPFGRY*SLFWILVQHLA Trigger: AGCCAGATGTTGTACCAATATCCAGAAGAGGGAGCAGTAGCGACCAAAGGGGAAGCACCCTTCAGTCTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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3UTR GCA 72 bp | TCTTTCACGGTCTTCCTACACAAGCGAGCACTCTGCTaGGTCACAGATTTACAGCTAAGCTATGGTGGGAAG | + |
Preference number: 3 (lower is better) Translates to: SFTVFLHKRALC*VTDLQLSYGGK Trigger: CTTCCCACCATAGCTTAGCTGTAAATCTGTGACGCAGCAGAGTGCTCGCTTGTGTAGGAAGACCGTGAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR TCA 72 bp | CTCCTAAGACCCTTTATCTGGCTCAGGCATGGCCCGTaGATCGTTCAGACAAGAACAAGCTCAAGAACATCT | + |
Preference number: 3 (lower is better) Translates to: LLRPFIWLRHGP*IVQTRTSSRTS Trigger: AGATGTTCTTGAGCTTGTTCTTGTCTGAACGATTCACGGGCCATGCCTGAGCCAGATAAAGGGTCTTAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR CCA 72 bp | AGCACTCTGCTGCGTCACAGATTTACAGCTAAGCTATaGTGGGAAGTGGGTGAACTCTACGGAGGAAGAATT | + |
Preference number: 3 (lower is better) Translates to: STLLRHRFTAKL*WEVGELYGGRI Trigger: AATTCTTCCTCCGTAGAGTTCACCCACTTCCCACCATAGCTTAGCTGTAAATCTGTGACGCAGCAGAGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR-3UTR CAA 90 bp | TCCCCTTTGGTCGCTACTGCTCCCTCTTCTGGATATTGGTACAACATCTGGCTTTACTTCTTGCAGTCCTaGGACACCATGCTTATGTTC | + |
Preference number: 3 (lower is better) Translates to: SPLVATAPSSGYWYNIWLYFLQS*DTMLMF Trigger: GAACATAAGCATGGTGTCCAAGGACTGCAAGAAGTA...AAGCCAGATGTTGTACCAATATCCAGAAGAGGGAGCAGTAGCGACCAAAGGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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3UTR-3UTR CAA 90 bp | TTCCCCTTTGGTCGCTACTGCTCCCTCTTCTGGATATTGGTACAACATCTGGCTGTAATTAGTTACTTCTaGCAGTCCTTGGACACCATG | + |
Preference number: 3 (lower is better) Translates to: FPFGRYCSLFWILVQHLAVISYF*QSLDTM Trigger: CATGGTGTCCAAGGACTGCAAGAAGTAACTAATTAC...AGCCAGATGTTGTACCAATATCCAGAAGAGGGAGCAGTAGCGACCAAAGGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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3UTR TCA 72 bp | CGTAGAGAACGTAGCATGTTTCTTCAGCACACCTTTTaGAGCGCATCGAGCATGGCTGAGTGTGTTGTATCT | + |
Preference number: 3 (lower is better) Translates to: RRERSMFLQHTF*SASSMAECVVS Trigger: AGATACAACACACTCAGCCATGCTCGATGCGCTTCAAAAGGTGTGCTGAAGAAACATGCTACGTTCTCTACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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3UTR GCA 72 bp | CCAGATATGAAAGGAGCAAGTGCGCACTTAGCTTGTTaGTTCAGGGCTCCTAAAAGCTGCAGTGCTTTCTTT | + |
Preference number: 3 (lower is better) Translates to: PDMKGASAHLAC*FRAPKSCSAFF Trigger: AAAGAAAGCACTGCAGCTTTTAGGAGCCCTGAAGCAACAAGCTAAGTGCGCACTTGCTCCTTTCATATCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR TCA 72 bp | TGTAGGAGCAGCAGCACCAACTTGCAGCATGTGTTCTaGACAGGAATCATACAGTCATACAGTTCCCAAAAG | + |
Preference number: 3 (lower is better) Translates to: CRSSSTNLQHVF*TGIIQSYSSQK Trigger: CTTTTGGGAACTGTATGACTGTATGATTCCTGTTCAGAACACATGCTGCAAGTTGGTGCTGCTGCTCCTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR GCA 72 bp | TCCCTCTTCTGGATATTGGTACAACATCTGGCTTTCTaGAGGATAAACTTTTGGGTTGCATTTTCCAGGCTG | + |
Preference number: 3 (lower is better) Translates to: SLFWILVQHLAF*RINFWVAFSRL Trigger: CAGCCTGGAAAATGCAACCCAAAAGTTTATCCTGCAGAAAGCCAGATGTTGTACCAATATCCAGAAGAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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3UTR GCA 72 bp | AAAATTAGTATATTCATTGCAATGAAGACTGAAGGGTaGTTCCCCTTTGGTCGCTACTGCTCCCTCTTCTGG | + |
Preference number: 3 (lower is better) Translates to: KISIFIAMKTEG*FPFGRYCSLFW Trigger: CCAGAAGAGGGAGCAGTAGCGACCAAAGGGGAAGCACCCTTCAGTCTTCATTGCAATGAATATACTAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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3UTR GCA 72 bp | TGCCATCAAACTTTGCACTTGACAGGAAATAAAGCCTaGCCTGTGCCTTTACACCTGAGTTCATTGATGGTT | + |
Preference number: 3 (lower is better) Translates to: CHQTLHLTGNKA*PVPLHLSSLMV Trigger: AACCATCAATGAACTCAGGTGTAAAGGCACAGGGCAGGCTTTATTTCCTGTCAAGTGCAAAGTTTGATGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR TCA 72 bp | GCCTATTGGAAGGCAAAATTAGTATATTCATTGCAATaGAGACTGAAGGGTGCTTCCCCTTTGGTCGCTACT | + |
Preference number: 3 (lower is better) Translates to: AYWKAKLVYSLQ*RLKGASPLVAT Trigger: AGTAGCGACCAAAGGGGAAGCACCCTTCAGTCTTCATTGCAATGAATATACTAATTTTGCCTTCCAATAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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3UTR GCA 72 bp | CTCTACCTTATTCTTGCCCATACCTTGTTGTCAAAGTaGCATCAAACTTTGCACTTGACAGGAAATAAAGCC | + |
Preference number: 3 (lower is better) Translates to: LYLILAHTLLSK*HQTLHLTGNKA Trigger: GGCTTTATTTCCTGTCAAGTGCAAAGTTTGATGGCACTTTGACAACAAGGTATGGGCAAGAATAAGGTAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR TCA 72 bp | CAGAATTACCCTATGGAATGTGTACTAATGAACAGATaGAAAGCTGCACCCTGCAGAAAACACAAAGTGACA | + |
Preference number: 3 (lower is better) Translates to: QNYPMECVLMNR*KAAPCRKHKVT Trigger: TGTCACTTTGTGTTTTCTGCAGGGTGCAGCTTTTCATCTGTTCATTAGTACACATTCCATAGGGTAATTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
||
3UTR TCA 72 bp | GTCGAACTTCTTCATCTGAGAAGATATCAAAGCTGCTaGACTGAATATTGTGTTTGTGAAGGATTTCCACCA | + |
Preference number: 3 (lower is better) Translates to: VELLHLRRYQSC*TEYCVCEGFPP Trigger: TGGTGGAAATCCTTCACAAACACAATATTCAGTTCAGCAGCTTTGATATCTTCTCAGATGAAGAAGTTCGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211769.2 |
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3UTR GCA 72 bp | GGAATTAGTGACAGCGATTATAAGTTTACACAGACATaGTACACACAAGCATCACTACAGAGACATTCTACA | + |
Preference number: 3 (lower is better) Translates to: GISDSDYKFTQT*YTQASLQRHST Trigger: TGTAGAATGTCTCTGTAGTGATGCTTGTGTGTAGCATGTCTGTGTAAACTTATAATCGCTGTCACTAATTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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3UTR GCA 72 bp | CCATTTACTAAGAAAACTACATCTCTACCTTATTCTTaGCCATACCTTGTTGTCAAAGTGCCATCAAACTTT | + |
Preference number: 3 (lower is better) Translates to: PFTKKTTSLPYS*PYLVVKVPSNF Trigger: AAAGTTTGATGGCACTTTGACAACAAGGTATGGGCAAGAATAAGGTAGAGATGTAGTTTTCTTAGTAAATGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
||
CDS-3UTR GCA 90 bp | CCAGTGGGCTGGCATGTCATCCACGGAGTCTGCAGTGTCAAAACAGGTTCAGAGGCCGACTTCCACCACTaGCACGGCTGCCTCGCCTGC | + |
Preference number: 4 (lower is better) Translates to: PVGWHVIHGVCSVKTGSEADFHH*HGCLAC Trigger: GCAGGCGAGGCAGCCGTGGCAGTGGTGGAAGTCGGC...CTCTGAACCTGTTTTGACACTGCAGACTCCGTGGATGACATGCCAGCCCACTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211769.2 |
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CDS-3UTR CCA 90 bp | CCTCAGCCAAGGGCCCCAAGTCTAATGGCTCCTCAGCCCATCTGCAGCCTGTCACCTACACTGACAGGCTaGAGAGGAGGAGCCCCACAC | + |
Preference number: 4 (lower is better) Translates to: PQPRAPSLMAPQPICSLSPTLTG*RGGAPH Trigger: GTGTGGGGCTCCTCCTCTCCAGCCTGTCAGTGTAGG...TGACAGGCTGCAGATGGGCTGAGGAGCCATTAGACTTGGGGCCCTTGGCTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
||
CDS-3UTR TCA 90 bp | ACTATCCTGCCTGGAGGAGGAGCTGCCCCAACATCTGCTGGTTACACCCTCAACGACGCGCACCTACACTaGCAGGCTGGAGAGGAGGAG | + |
Preference number: 4 (lower is better) Translates to: TILPGGGAAPTSAGYTLNDAHLH*QAGEEE Trigger: CTCCTCCTCTCCAGCCTGTCAGTGTAGGTGCGCGTC...GTTGAGGGTGTAACCAGCAGATGTTGGGGCAGCTCCTCCTCCAGGCAGGATAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
||
CDS-3UTR GCA 90 bp | CTGAAGGGTGCTTCCCCTTTGGTCGCTACTGCTCCCTCTTCTGGATATTGGTACGCCGACTTCCACCACTaGCACGGCTGCCTCGCCTGC | + |
Preference number: 4 (lower is better) Translates to: LKGASPLVATAPSSGYWYADFHH*HGCLAC Trigger: GCAGGCGAGGCAGCCGTGGCAGTGGTGGAAGTCGGC...GTACCAATATCCAGAAGAGGGAGCAGTAGCGACCAAAGGGGAAGCACCCTTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
||
CDS-3UTR TCA 90 bp | AGGGCCCCAAGTCTAATGGCTCCTCAGCCCATCTGCAGCCTGTCAGGGGTGCCTATGAACCACAAGGAGTaGCTTGGTTTTGAGGCGCAG | + |
Preference number: 4 (lower is better) Translates to: RAPSLMAPQPICSLSGVPMNHKE*LGFEAQ Trigger: CTGCGCCTCAAAACCAAGTCACTCCTTGTGGTTCAT...AGGCACCCCTGACAGGCTGCAGATGGGCTGAGGAGCCATTAGACTTGGGGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
||
CDS-3UTR TCA 90 bp | AGGGCCCCAAGTCTAATGGCTCCTCAGCCCATCTGCAGCCTGTCAGGGGTGCCTCGTGTCCAGCTCTTCTaGTGCTTCCAGCTCCTTAAT | + |
Preference number: 4 (lower is better) Translates to: RAPSLMAPQPICSLSGVPRVQLF*CFQLLN Trigger: ATTAAGGAGCTGGAAGCATCAGAAGAGCTGGACACG...AGGCACCCCTGACAGGCTGCAGATGGGCTGAGGAGCCATTAGACTTGGGGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
||
CDS-3UTR GCA 90 bp | ATGTGTGCACCCAGATATGAAAGGAGCAAGTGCGCACTTAGCTTGTTGCTTCAGGCCGACTTCCACCACTaGCACGGCTGCCTCGCCTGC | + |
Preference number: 4 (lower is better) Translates to: MCAPRYERSKCALSLLLQADFHH*HGCLAC Trigger: GCAGGCGAGGCAGCCGTGGCAGTGGTGGAAGTCGGC...CTGAAGCAACAAGCTAAGTGCGCACTTGCTCCTTTCATATCTGGGTGCACACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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CDS-3UTR CCA 90 bp | AAGTGGGTGAACTCTACGGAGGAAGAATTCTTCCCTCTGAGACCCCTGGAGAGCGCGTTTCCCTCTGCCTaGCAGCTGAGCAGGAGGAAG | + |
Preference number: 4 (lower is better) Translates to: KWVNSTEEEFFPLRPLESAFPSA*QLSRRK Trigger: CTTCCTCCTGCTCAGCTGCCAGGCAGAGGGAAACGC...GCTCTCCAGGGGTCTCAGAGGGAAGAATTCTTCCTCCGTAGAGTTCACCCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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CDS-3UTR CCA 90 bp | CGGCTTCCAGTGGGCTGGCATGTCATCCACGGAGTCTGCAGTGTCAAAACAGGTACACTGTGGAGCCCATaGTGCCCAGAAATGAACCAC | + |
Preference number: 4 (lower is better) Translates to: RLPVGWHVIHGVCSVKTGTLWSP*CPEMNH Trigger: GTGGTTCATTTCTGGGCACCATGGGCTCCACAGTGT...ACCTGTTTTGACACTGCAGACTCCGTGGATGACATGCCAGCCCACTGGAAGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211769.2 |
||
CDS-3UTR TCA 90 bp | ACAGCTTCGGCTTCCAGTGGGCTGGCATGTCATCCACGGAGTCTGCAGTGTCAAATGAACCACAAGGAGTaGCTTGGTTTTGAGGCGCAG | + |
Preference number: 4 (lower is better) Translates to: TASASSGLACHPRSLQCQMNHKE*LGFEAQ Trigger: CTGCGCCTCAAAACCAAGTCACTCCTTGTGGTTCAT...TTGACACTGCAGACTCCGTGGATGACATGCCAGCCCACTGGAAGCCGAAGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211769.2 |
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CDS-3UTR TCA 90 bp | GGGCACTATCCTGCCTGGAGGAGGAGCTGCCCCAACATCTGCTGGTTACACCCTCTTTCTGAGAATTCTTaGAGAACAGGAAGGTGGGGA | + |
Preference number: 4 (lower is better) Translates to: GHYPAWRRSCPNICWLHPLSENS*RTGRWG Trigger: TCCCCACCTTCCTGTTCTTCAAGAATTCTCAGAAAG...AGGGTGTAACCAGCAGATGTTGGGGCAGCTCCTCCTCCAGGCAGGATAGTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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CDS-3UTR TCA 90 bp | AAGTGGGTGAACTCTACGGAGGAAGAATTCTTCCCTCTGAGACCCCTGGAGAGCCCACCATCTGCTTGCTaGAACCACAGCGTGGTTCTT | + |
Preference number: 4 (lower is better) Translates to: KWVNSTEEEFFPLRPLESPPSAC*NHSVVL Trigger: AAGAACCACGCTGTGGTTTCAGCAAGCAGATGGTGG...GCTCTCCAGGGGTCTCAGAGGGAAGAATTCTTCCTCCGTAGAGTTCACCCACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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CDS-3UTR TCA 90 bp | GCAATGAAGACTGAAGGGTGCTTCCCCTTTGGTCGCTACTGCTCCCTCTTCTGGCGTGTCCAGCTCTTCTaGTGCTTCCAGCTCCTTAAT | + |
Preference number: 4 (lower is better) Translates to: AMKTEGCFPFGRYCSLFWRVQLF*CFQLLN Trigger: ATTAAGGAGCTGGAAGCATCAGAAGAGCTGGACACG...CCAGAAGAGGGAGCAGTAGCGACCAAAGGGGAAGCACCCTTCAGTCTTCATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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CDS-3UTR GCA 90 bp | GGGCACTATCCTGCCTGGAGGAGGAGCTGCCCCAACATCTGCTGGTTACACCCTACCACCCCAGCTGGATaGTTAAACATAACAAGTATG | + |
Preference number: 4 (lower is better) Translates to: GHYPAWRRSCPNICWLHPTTPAG*LNITSM Trigger: CATACTTGTTATGTTTAAGCATCCAGCTGGGGTGGT...AGGGTGTAACCAGCAGATGTTGGGGCAGCTCCTCCTCCAGGCAGGATAGTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR CAA 72 bp | TTGGCCATAAACTGCCTGGCGTCAGATTCCCGAAGTTaGAGCCAGGCTGACGAAAGTCTCATTCTCCCTCTC | + |
Preference number: 4 (lower is better) Translates to: LAINCLASDSRS*SQADESLILPL Trigger: GAGAGGGAGAATGAGACTTTCGTCAGCCTGGCTCAAACTTCGGGAATCTGACGCCAGGCAGTTTATGGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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CDS-3UTR TCA 90 bp | AAGTGGGTGAACTCTACGGAGGAAGAATTCTTCCCTCTGAGACCCCTGGAGAGCCATGGTGCCCAGAAATaGACCACAAGGAGTGACTTG | + |
Preference number: 4 (lower is better) Translates to: KWVNSTEEEFFPLRPLESHGAQK*TTRSDL Trigger: CAAGTCACTCCTTGTGGTTCATTTCTGGGCACCATG...GCTCTCCAGGGGTCTCAGAGGGAAGAATTCTTCCTCCGTAGAGTTCACCCACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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CDS-3UTR TCA 90 bp | ACACACCCTCAGCCAAGGGCCCCAAGTCTAATGGCTCCTCAGCCCATCTGCAGCGAAAAGCTCTTACCTTaGCAATATCCAATCCTCCAA | + |
Preference number: 4 (lower is better) Translates to: THPQPRAPSLMAPQPICSEKLLP*QYPILQ Trigger: TTGGAGGATTGGATATTGTCAAGGTAAGAGCTTTTC...GCTGCAGATGGGCTGAGGAGCCATTAGACTTGGGGCCCTTGGCTGAGGGTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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CDS-3UTR TCA 90 bp | TCCCCTTTGGTCGCTACTGCTCCCTCTTCTGGATATTGGTACAACATCTGGCTTCCACCATCTGCTTGCTaGAACCACAGCGTGGTTCTT | + |
Preference number: 4 (lower is better) Translates to: SPLVATAPSSGYWYNIWLPPSAC*NHSVVL Trigger: AAGAACCACGCTGTGGTTTCAGCAAGCAGATGGTGG...AAGCCAGATGTTGTACCAATATCCAGAAGAGGGAGCAGTAGCGACCAAAGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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CDS-3UTR CCA 90 bp | TTCCCCTTTGGTCGCTACTGCTCCCTCTTCTGGATATTGGTACAACATCTGGCTCATCTGTACACACTGTaGAGCCCATGGTGCCCAGAA | + |
Preference number: 4 (lower is better) Translates to: FPFGRYCSLFWILVQHLAHLYTL*SPWCPE Trigger: TTCTGGGCACCATGGGCTCCACAGTGTGTACAGATG...AGCCAGATGTTGTACCAATATCCAGAAGAGGGAGCAGTAGCGACCAAAGGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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CDS-3UTR TCA 90 bp | TGCTTCCCCTTTGGTCGCTACTGCTCCCTCTTCTGGATATTGGTACAACATCTGATGAACCACAAGGAGTaGCTTGGTTTTGAGGCGCAG | + |
Preference number: 4 (lower is better) Translates to: CFPFGRYCSLFWILVQHLMNHKE*LGFEAQ Trigger: CTGCGCCTCAAAACCAAGTCACTCCTTGTGGTTCAT...CAGATGTTGTACCAATATCCAGAAGAGGGAGCAGTAGCGACCAAAGGGGAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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CDS-3UTR TCA 90 bp | ATGTGTGCACCCAGATATGAAAGGAGCAAGTGCGCACTTAGCTTGTTGCTTCAGCCACAGCGTGGTTCTTaGGGTGTTCCCTTCATGAAC | + |
Preference number: 4 (lower is better) Translates to: MCAPRYERSKCALSLLLQPQRGS*GVPFMN Trigger: GTTCATGAAGGGAACACCTCAAGAACCACGCTGTGG...CTGAAGCAACAAGCTAAGTGCGCACTTGCTCCTTTCATATCTGGGTGCACACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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CDS-3UTR TCA 90 bp | CCAGTGGGCTGGCATGTCATCCACGGAGTCTGCAGTGTCAAAACAGGTTCAGAGTGGAGGCTTCACAAATaGAACATGAGGGTGTTCTTT | + |
Preference number: 4 (lower is better) Translates to: PVGWHVIHGVCSVKTGSEWRLHK*NMRVFF Trigger: AAAGAACACCCTCATGTTTCATTTGTGAAGCCTCCA...CTCTGAACCTGTTTTGACACTGCAGACTCCGTGGATGACATGCCAGCCCACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211769.2 |
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CDS-3UTR TCA 90 bp | GCAATGAAGACTGAAGGGTGCTTCCCCTTTGGTCGCTACTGCTCCCTCTTCTGGTCGAACTTCTTCATCTaGGAAGATATCAAAGCTGCT | + |
Preference number: 4 (lower is better) Translates to: AMKTEGCFPFGRYCSLFWSNFFI*EDIKAA Trigger: AGCAGCTTTGATATCTTCTCAGATGAAGAAGTTCGA...CCAGAAGAGGGAGCAGTAGCGACCAAAGGGGAAGCACCCTTCAGTCTTCATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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CDS-3UTR TCA 90 bp | GAAAACTACATCTCTACCTTATTCTTGCCCATACCTTGTTGTCAAAGTGCCATCCCTCTGCCTGGCAGCTaGGCAGGAGGAAGCATGAGA | + |
Preference number: 4 (lower is better) Translates to: ENYISTLFLPIPCCQSAIPLPGS*AGGSMR Trigger: TCTCATGCTTCCTCCTGCTCAGCTGCCAGGCAGAGG...GATGGCACTTTGACAACAAGGTATGGGCAAGAATAAGGTAGAGATGTAGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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CDS-3UTR GCA 90 bp | AACTCACAAATGGGAGGAAGAGCTGGCAAACAATGTCAGGACAAAGTTAAAAGGCTGTGGAGCCCATGGTaGCCAGAAATGAACCACAAG | + |
Preference number: 4 (lower is better) Translates to: NSQMGGRAGKQCQDKVKRLWSPW*PEMNHK Trigger: CTTGTGGTTCATTTCTGGGCACCATGGGCTCCACAG...CCTTTTAACTTTGTCCTGACATTGTTTGCCAGCTCTTCCTCCCATTTGTGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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CDS-3UTR CCA 90 bp | AACTCACAAATGGGAGGAAGAGCTGGCAAACAATGTCAGGACAAAGTTAAAAGGACACTGTGGAGCCCATaGTGCCCAGAAATGAACCAC | + |
Preference number: 4 (lower is better) Translates to: NSQMGGRAGKQCQDKVKRTLWSP*CPEMNH Trigger: GTGGTTCATTTCTGGGCACCATGGGCTCCACAGTGT...CCTTTTAACTTTGTCCTGACATTGTTTGCCAGCTCTTCCTCCCATTTGTGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR CAA 72 bp | CTTGCCCATACCTTGTTGTCAAAGTGCCATCAAACTTaGCACTTGACAGGAAATAAAGCCTGCCCTGTGCCT | + |
Preference number: 4 (lower is better) Translates to: LAHTLLSKCHQT*HLTGNKACPVP Trigger: AGGCACAGGGCAGGCTTTATTTCCTGTCAAGTGCAAAGTTTGATGGCACTTTGACAACAAGGTATGGGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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CDS-3UTR TCA 90 bp | ACAGACATGCTACACACAAGCATCACTACAGAGACATTCTACACGCAATCATTTCCACAGCGTGGTTCTTaGGGTGTTCCCTTCATGAAC | + |
Preference number: 4 (lower is better) Translates to: TDMLHTSITTETFYTQSFPQRGS*GVPFMN Trigger: GTTCATGAAGGGAACACCTCAAGAACCACGCTGTGG...AAATGATTGCGTGTAGAATGTCTCTGTAGTGATGCTTGTGTGTAGCATGTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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CDS-3UTR GCA 90 bp | ACAGACATGCTACACACAAGCATCACTACAGAGACATTCTACACGCAATCATTTCTGTGGAGCCCATGGTaGCCAGAAATGAACCACAAG | + |
Preference number: 4 (lower is better) Translates to: TDMLHTSITTETFYTQSFLWSPW*PEMNHK Trigger: CTTGTGGTTCATTTCTGGGCACCATGGGCTCCACAG...AAATGATTGCGTGTAGAATGTCTCTGTAGTGATGCTTGTGTGTAGCATGTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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CDS-3UTR CCA 90 bp | TGTTCCAAGGTAATTAGTTACTTCTTGCAGTCCTTGGACACCATGCTTATGTTCACACTGTGGAGCCCATaGTGCCCAGAAATGAACCAC | + |
Preference number: 4 (lower is better) Translates to: CSKVISYFLQSLDTMLMFTLWSP*CPEMNH Trigger: GTGGTTCATTTCTGGGCACCATGGGCTCCACAGTGT...GAACATAAGCATGGTGTCCAAGGACTGCAAGAAGTAACTAATTACCTTGGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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CDS-3UTR CCA 90 bp | CTACATCTCTACCTTATTCTTGCCCATACCTTGTTGTCAAAGTGCCATCAAACTCATCTGTACACACTGTaGAGCCCATGGTGCCCAGAA | + |
Preference number: 4 (lower is better) Translates to: LHLYLILAHTLLSKCHQTHLYTL*SPWCPE Trigger: TTCTGGGCACCATGGGCTCCACAGTGTGTACAGATG...AGTTTGATGGCACTTTGACAACAAGGTATGGGCAAGAATAAGGTAGAGATGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR CAA 72 bp | TTCCCCTTTGGTCGCTACTGCTCCCTCTTCTGGATATaGGTACAACATCTGGCTTTCTGCAGGATAAACTTT | + |
Preference number: 4 (lower is better) Translates to: FPFGRYCSLFWI*VQHLAFCRINF Trigger: AAAGTTTATCCTGCAGAAAGCCAGATGTTGTACCAATATCCAGAAGAGGGAGCAGTAGCGACCAAAGGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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CDS-3UTR TCA 90 bp | TGTTCCAAGGTAATTAGTTACTTCTTGCAGTCCTTGGACACCATGCTTATGTTCCATGGTGCCCAGAAATaGACCACAAGGAGTGACTTG | + |
Preference number: 4 (lower is better) Translates to: CSKVISYFLQSLDTMLMFHGAQK*TTRSDL Trigger: CAAGTCACTCCTTGTGGTTCATTTCTGGGCACCATG...GAACATAAGCATGGTGTCCAAGGACTGCAAGAAGTAACTAATTACCTTGGAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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CDS-3UTR TCA 90 bp | ATGTGTGCACCCAGATATGAAAGGAGCAAGTGCGCACTTAGCTTGTTGCTTCAGTCGAACTTCTTCATCTaGGAAGATATCAAAGCTGCT | + |
Preference number: 4 (lower is better) Translates to: MCAPRYERSKCALSLLLQSNFFI*EDIKAA Trigger: AGCAGCTTTGATATCTTCTCAGATGAAGAAGTTCGA...CTGAAGCAACAAGCTAAGTGCGCACTTGCTCCTTTCATATCTGGGTGCACACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR CAA 72 bp | CATACCTTGTTGTCAAAGTGCCATCAAACTTTGCACTaGACAGGAAATAAAGCCTGCCCTGTGCCTTTACAC | + |
Preference number: 4 (lower is better) Translates to: HTLLSKCHQTLH*TGNKACPVPLH Trigger: GTGTAAAGGCACAGGGCAGGCTTTATTTCCTGTCAAGTGCAAAGTTTGATGGCACTTTGACAACAAGGTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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CDS-3UTR TCA 90 bp | CTCCCTCTTCTGGATATTGGTACAACATCTGGCTTTCTGCAGGATAAACTTTTGCTTTCTGAGAATTCTTaGAGAACAGGAAGGTGGGGA | + |
Preference number: 4 (lower is better) Translates to: LPLLDIGTTSGFLQDKLLLSENS*RTGRWG Trigger: TCCCCACCTTCCTGTTCTTCAAGAATTCTCAGAAAG...CAAAAGTTTATCCTGCAGAAAGCCAGATGTTGTACCAATATCCAGAAGAGGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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3UTR CAA 72 bp | ACTTACGGAAATCTTCCTGCCTTTGTGTGTCAAATGTaGGGATTAAAGGCATGTACATACTCCCAAGTCTTG | + |
Preference number: 4 (lower is better) Translates to: TYGNLPAFVCQM*GLKACTYSQVL Trigger: CAAGACTTGGGAGTATGTACATGCCTTTAATCCCAACATTTGACACACAAAGGCAGGAAGATTTCCGTAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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CDS-3UTR TCA 90 bp | AACTCACAAATGGGAGGAAGAGCTGGCAAACAATGTCAGGACAAAGTTAAAAGGTTCCAGCTTCACAAATaGAACATGAGGGTGTTCTTT | + |
Preference number: 4 (lower is better) Translates to: NSQMGGRAGKQCQDKVKRFQLHK*NMRVFF Trigger: AAAGAACACCCTCATGTTTCATTTGTGAAGCTGGAA...CCTTTTAACTTTGTCCTGACATTGTTTGCCAGCTCTTCCTCCCATTTGTGAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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CDS-3UTR TCA 90 bp | GTGCTACAGGAGGTCCATGTGTTAAGAAAGGGATTTAAAGGAATTAGTGACAGCTGTCTTTCAGTTCCTTaGCAATATCCAATCCTCCAA | + |
Preference number: 4 (lower is better) Translates to: VLQEVHVLRKGFKGISDSCLSVP*QYPILQ Trigger: TTGGAGGATTGGATATTGTCAAGGAACTGAAAGACA...GCTGTCACTAATTCCTTTAAATCCCTTTCTTAACACATGGACCTCCTGTAGCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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CDS-3UTR TCA 90 bp | TGTTCCAAGGTAATTAGTTACTTCTTGCAGTCCTTGGACACCATGCTTATGTTCTTCCAGCTTCACAAATaGAACATGAGGGTGTTCTTT | + |
Preference number: 4 (lower is better) Translates to: CSKVISYFLQSLDTMLMFFQLHK*NMRVFF Trigger: AAAGAACACCCTCATGTTTCATTTGTGAAGCTGGAA...GAACATAAGCATGGTGTCCAAGGACTGCAAGAAGTAACTAATTACCTTGGAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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3UTR CAA 72 bp | AAACTACATCTCTACCTTATTCTTGCCCATACCTTGTaGTCAAAGTGCCATCAAACTTTGCACTTGACAGGA | + |
Preference number: 4 (lower is better) Translates to: KLHLYLILAHTL*SKCHQTLHLTG Trigger: TCCTGTCAAGTGCAAAGTTTGATGGCACTTTGACAACAAGGTATGGGCAAGAATAAGGTAGAGATGTAGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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3UTR CAA 72 bp | AGAAAACTACATCTCTACCTTATTCTTGCCCATACCTaGTTGTCAAAGTGCCATCAAACTTTGCACTTGACA | + |
Preference number: 4 (lower is better) Translates to: RKLHLYLILAHT*LSKCHQTLHLT Trigger: TGTCAAGTGCAAAGTTTGATGGCACTTTGACAACAAGGTATGGGCAAGAATAAGGTAGAGATGTAGTTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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CDS-3UTR CAA 90 bp | GCAATGAAGACTGAAGGGTGCTTCCCCTTTGGTCGCTACTGCTCCCTCTTCTGGACCACAAGGAGTGACTaGGTTTTGAGGCGCAGTAGC | + |
Preference number: 5 (lower is better) Translates to: AMKTEGCFPFGRYCSLFWTTRSD*VLRRSS Trigger: GCTACTGCGCCTCAAAACCAAGTCACTCCTTGTGGT...CCAGAAGAGGGAGCAGTAGCGACCAAAGGGGAAGCACCCTTCAGTCTTCATTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
||
CDS-3UTR CAA 90 bp | CCAGTGGGCTGGCATGTCATCCACGGAGTCTGCAGTGTCAAAACAGGTTCAGAGACCACAAGGAGTGACTaGGTTTTGAGGCGCAGTAGC | + |
Preference number: 5 (lower is better) Translates to: PVGWHVIHGVCSVKTGSETTRSD*VLRRSS Trigger: GCTACTGCGCCTCAAAACCAAGTCACTCCTTGTGGT...CTCTGAACCTGTTTTGACACTGCAGACTCCGTGGATGACATGCCAGCCCACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211769.2 |
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CDS-3UTR CAA 90 bp | ACTATCCTGCCTGGAGGAGGAGCTGCCCCAACATCTGCTGGTTACACCCTCAACCAAGTATGTCAATTCTaGAGAACAGCAGTGAAAAGC | + |
Preference number: 5 (lower is better) Translates to: TILPGGGAAPTSAGYTLNQVCQF*RTAVKS Trigger: GCTTTTCACTGCTGTTCTCAAGAATTGACATACTTG...GTTGAGGGTGTAACCAGCAGATGTTGGGGCAGCTCCTCCTCCAGGCAGGATAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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CDS-3UTR CAA 90 bp | GGGTGCTTCCCCTTTGGTCGCTACTGCTCCCTCTTCTGGATATTGGTACAACATCAATTAGAGTACGTTTaGAGCCCCTGTCGAACTTCT | + |
Preference number: 5 (lower is better) Translates to: GCFPFGRYCSLFWILVQHQLEYV*SPCRTS Trigger: AGAAGTTCGACAGGGGCTCAAAACGTACTCTAATTG...ATGTTGTACCAATATCCAGAAGAGGGAGCAGTAGCGACCAAAGGGGAAGCACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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CDS-3UTR CAA 90 bp | GCAATGAAGACTGAAGGGTGCTTCCCCTTTGGTCGCTACTGCTCCCTCTTCTGGTTGTCTTTCAGTTCCTaGACAATATCCAATCCTCCA | + |
Preference number: 5 (lower is better) Translates to: AMKTEGCFPFGRYCSLFWLSFSS*TISNPP Trigger: TGGAGGATTGGATATTGTCAAGGAACTGAAAGACAA...CCAGAAGAGGGAGCAGTAGCGACCAAAGGGGAAGCACCCTTCAGTCTTCATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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CDS-3UTR CAA 90 bp | CTACATCTCTACCTTATTCTTGCCCATACCTTGTTGTCAAAGTGCCATCAAACTACCACAAGGAGTGACTaGGTTTTGAGGCGCAGTAGC | + |
Preference number: 5 (lower is better) Translates to: LHLYLILAHTLLSKCHQTTTRSD*VLRRSS Trigger: GCTACTGCGCCTCAAAACCAAGTCACTCCTTGTGGT...AGTTTGATGGCACTTTGACAACAAGGTATGGGCAAGAATAAGGTAGAGATGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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CDS-3UTR CAA 90 bp | CACTTAGCTTGTTGCTTCAGGGCTCCTAAAAGCTGCAGTGCTTTCTTTTCTCCACAATTAGAGTACGTTTaGAGCCCCTGTCGAACTTCT | + |
Preference number: 5 (lower is better) Translates to: HLACCFRAPKSCSAFFSPQLEYV*SPCRTS Trigger: AGAAGTTCGACAGGGGCTCAAAACGTACTCTAATTG...TGGAGAAAAGAAAGCACTGCAGCTTTTAGGAGCCCTGAAGCAACAAGCTAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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CDS-3UTR CAA 90 bp | TGTTCCAAGGTAATTAGTTACTTCTTGCAGTCCTTGGACACCATGCTTATGTTCTCTAACTTGGGTGCTTaGGGACAGATCGTGTCCAGC | + |
Preference number: 5 (lower is better) Translates to: CSKVISYFLQSLDTMLMFSNLGA*GQIVSS Trigger: GCTGGACACGATCTGTCCCAAAGCACCCAAGTTAGA...GAACATAAGCATGGTGTCCAAGGACTGCAAGAAGTAACTAATTACCTTGGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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CDS-3UTR CAA 90 bp | CTACATCTCTACCTTATTCTTGCCCATACCTTGTTGTCAAAGTGCCATCAAACTTCTAACTTGGGTGCTTaGGGACAGATCGTGTCCAGC | + |
Preference number: 5 (lower is better) Translates to: LHLYLILAHTLLSKCHQTSNLGA*GQIVSS Trigger: GCTGGACACGATCTGTCCCAAAGCACCCAAGTTAGA...AGTTTGATGGCACTTTGACAACAAGGTATGGGCAAGAATAAGGTAGAGATGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |
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CDS-3UTR CAA 90 bp | GTTTATTGCCTTCTCTGCTTCGTAGAGAACGTAGCATGTTTCTTCAGCACACCTTTATTGGTCAGCACTTaGAGCCTTTCCTCTAACTTG | + |
Preference number: 5 (lower is better) Translates to: VYCLLCFVENVACFFSTPLLVST*SLSSNL Trigger: CAAGTTAGAGGAAAGGCTCAAAGTGCTGACCAATAA...AGGTGTGCTGAAGAAACATGCTACGTTCTCTACGAAGCAGAGAAGGCAATAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064404.8 |
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CDS-3UTR CAA 90 bp | CACAAATGGGAGGAAGAGCTGGCAAACAATGTCAGGACAAAGTTAAAAGGGTTCTTATTGGTCAGCACTTaGAGCCTTTCCTCTAACTTG | + |
Preference number: 5 (lower is better) Translates to: HKWEEELANNVRTKLKGFLLVST*SLSSNL Trigger: CAAGTTAGAGGAAAGGCTCAAAGTGCTGACCAATAA...GAACCCTTTTAACTTTGTCCTGACATTGTTTGCCAGCTCTTCCTCCCATTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211496.2 |