Pregenerated sensors for GLRX2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018196Ensembl transcript IDs: ENSMUST00000050491.11, ENSMUST00000111957.10, ENSMUST00000129653.3, ENSMUST00000145571.2, ENSMUST00000145969.8, ENSMUST00000185362.7
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGTCATCAATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGTTCTATaGCCCGGTATAGGGGAATGCCAGGGCCAGGAATGGGAGTGGGTG | + |
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Preference number: 1 (lower is better) Translates to: WSSMGGEALGPVKVL*PGIGECQGQEWEWV Trigger: CACCCACTCCCATTCCTGGCCCTGGCATTCCCCTATACCGGGGCATAGAACCTTCACAGGACCAAGGGCCTCTCCTCCCATTGATGACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR CCA 90 bp | ACACATGGTGGGACTCATGGCTCGAGCTTCGTATGTAGCAGAGGATaGCCTAGTTGGTCATCAATGGGAGGAGAGGCCCTTGGTCCTGTG | + |
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Preference number: 1 (lower is better) Translates to: THGGTHGSSFVCSRG*PSWSSMGGEALGPV Trigger: CACAGGACCAAGGGCCTCTCCTCCCATTGATGACCAACTAGGCCATCCTCTGCTACATACGAAGCTCGAGCCATGAGTCCCACCATGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR CCA 90 bp | GGGACTCATGGCTCGAGCTTCGTATGTAGCAGAGGATGGCCTAGTTaGTCATCAATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGTTCTA | + |
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Preference number: 1 (lower is better) Translates to: GTHGSSFVCSRGWPS*SSMGGEALGPVKVL Trigger: TAGAACCTTCACAGGACCAAGGGCCTCTCCTCCCATTGATGACCAACTAGGCCATCCTCTGCTACATACGAAGCTCGAGCCATGAGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR GCA 90 bp | CAGAGGCAGCAATTTCCCTTCTTTGTGAAGCCTGTGAGTGTCCGCTaGGCCTCCAATAAATCGTCCATTGACAAATATCCTGGGAACGGT | + |
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Preference number: 1 (lower is better) Translates to: QRQQFPFFVKPVSVR*ASNKSSIDKYPGNG Trigger: ACCGTTCCCAGGATATTTGTCAATGGACGATTTATTGGAGGCGCAGCGGACACTCACAGGCTTCACAAAGAAGGGAAATTGCTGCCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050491.11 |
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| 3UTR TCA 90 bp | AATACCCATGGAAGGAGTTACAGAGATAAAGCATGGAGCAGAAACTaGACAAATGACCATCCAGAGACTGCCCCACCTGGAGATCCATCC | + |
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Preference number: 1 (lower is better) Translates to: NTHGRSYRDKAWSRN*TNDHPETAPPGDPS Trigger: GGATGGATCTCCAGGTGGGGCAGTCTCTGGATGGTCATTTGTTCAGTTTCTGCTCCATGCTTTATCTCTGTAACTCCTTCCATGGGTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR CCA 90 bp | GACTCAGACAGACTACCTGAGACTGAGTACTTTATGAAGAAGAGATaGACTTTCTCTAGGTCATCGGTCGGGAAGGTGAGGTTATCTAGT | + |
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Preference number: 1 (lower is better) Translates to: DSDRLPETEYFMKKR*TFSRSSVGKVRLSS Trigger: ACTAGATAACCTCACCTTCCCGACCGATGACCTAGAGAAAGTCCATCTCTTCTTCATAAAGTACTCAGTCTCAGGTAGTCTGTCTGAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR TCA 90 bp | ACTGGTTGCCATATTCCAGCATATCCAACTCCACAGCCTTGTAGTTaGCATTCATGTCATGGAAAATCTTCTTGGCCATGGAACAGTAAG | + |
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Preference number: 1 (lower is better) Translates to: TGCHIPAYPTPQPCS*HSCHGKSSWPWNSK Trigger: CTTACTGTTCCATGGCCAAGAAGATTTTCCATGACATGAATGTCAACTACAAGGCTGTGGAGTTGGATATGCTGGAATATGGCAACCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050491.11 |
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| 3UTR CCA 90 bp | GAGAATAGTAAGATAACAGAAGTGATTTTAGGGACGCTCCATCTGTaGGACTCAGACAGACTACCTGAGACTGAGTACTTTATGAAGAAG | + |
|
Preference number: 1 (lower is better) Translates to: ENSKITEVILGTLHL*DSDRLPETEYFMKK Trigger: CTTCTTCATAAAGTACTCAGTCTCAGGTAGTCTGTCTGAGTCCCACAGATGGAGCGTCCCTAAAATCACTTCTGTTATCTTACTATTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR CCA 90 bp | AAACAGCCTCAAGTCAAAGGTACGACTGCACTAACTAGCATTTACTaGTATGGCGACTATCCACATCATTCAATGTCTTTCCTCTTGTTT | + |
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Preference number: 1 (lower is better) Translates to: KQPQVKGTTALTSIY*YGDYPHHSMSFLLF Trigger: AAACAAGAGGAAAGACATTGAATGATGTGGATAGTCGCCATACCAGTAAATGCTAGTTAGTGCAGTCGTACCTTTGACTTGAGGCTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050491.11 |
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| 3UTR CCA 90 bp | GGAAGAACTGATAAAACATTCTTAAGAATTAGTTGTATAGCTAAGTaGTATATTAGCCCAGTGGATATTAGCCCAGAAGCTCAGAATACC | + |
|
Preference number: 1 (lower is better) Translates to: GRTDKTFLRISCIAK*YISPVDISPEAQNT Trigger: GGTATTCTGAGCTTCTGGGCTAATATCCACTGGGCTAATATACCACTTAGCTATACAACTAATTCTTAAGAATGTTTTATCAGTTCTTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR-3UTR TCA 90 bp | GACCAGGCTGGCCTCAAACTCAGAAATCCGCCCGCCTCTGCCTCACAAGTGCTGAAGGACCCAAGGAGCTaGAGGAGTTTGCAAGCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: DQAGLKLRNPPASASQVLKDPRS*RSLQAP Trigger: TGGGGCTTGCAAACTCCTTCAGCTCCTTGGGTCCTT...CAGCACTTGTGAGGCAGAGGCGGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129653.3 |
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| 3UTR-3UTR GCA 90 bp | TGGATGCTCATAGCCATCCATTGGACAGAGCACAGGGTCCCCAATGAAGTAGCTCCCGGTATAGGGGAATaGCAGGGCCAGGAATGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: WMLIAIHWTEHRVPNEVAPGIGE*QGQEWE Trigger: CTCCCATTCCTGGCCCTGGCATTCCCCTATACCGGG...AGCTACTTCATTGGGGACCCTGTGCTCTGTCCAATGGATGGCTATGAGCATCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR-3UTR GCA 90 bp | GACCAGGCTGGCCTCAAACTCAGAAATCCGCCCGCCTCTGCCTCACAAGTGCTGGAGCAAGAGTTTAAGTaGGTACTCCCTCTTTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: DQAGLKLRNPPASASQVLEQEFK*VLPLCC Trigger: ACAGCAAAGAGGGAGTACGCACTTAAACTCTTGCTC...CAGCACTTGTGAGGCAGAGGCGGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129653.3 |
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| 3UTR-3UTR GCA 90 bp | TCAATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGTTCTATGCCCCGGTATAGGGGCTGTATCAGGACACTaGAGAGGAAGAAGAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: SMGGEALGPVKVLCPGIGAVSGH*RGRRGR Trigger: TCTTCCTCTTCTTCCTCTGCAGTGTCCTGATACAGC...CCCTATACCGGGGCATAGAACCTTCACAGGACCAAGGGCCTCTCCTCCCATTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR-3UTR TCA 90 bp | TCAATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGTTCTATGCCCCGGTATAGGGCATAAAGGGTTGTCATaGTATGGTATCCCAACCCAC | + |
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Preference number: 2 (lower is better) Translates to: SMGGEALGPVKVLCPGIGHKGLS*YGIPTH Trigger: GTGGGTTGGGATACCATATCATGACAACCCTTTATG...CCCTATACCGGGGCATAGAACCTTCACAGGACCAAGGGCCTCTCCTCCCATTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR-3UTR CCA 90 bp | GGCCTCAAACTCAGAAATCCGCCCGCCTCTGCCTCACAAGTGCTGGGATTAAAGCTGAAGCACTCACTCTaGGAAGTCCATGTTCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: GLKLRNPPASASQVLGLKLKHSL*EVHVLP Trigger: AGGAAGAACATGGACTTCCCAGAGTGAGTGCTTCAG...CTTTAATCCCAGCACTTGTGAGGCAGAGGCGGGCGGATTTCTGAGTTTGAGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129653.3 |
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| 3UTR-3UTR TCA 90 bp | GACTGCCCCACCTGGAGATCCATCCCATTAACAATCACCAAACCCGACACTATTTGTGTTTCCAACACATaGTGTCTGTGGTGGGGCACG | + |
|
Preference number: 2 (lower is better) Translates to: DCPTWRSIPLTITKPDTICVSNT*CLWWGT Trigger: CGTGCCCCACCACAGACATCATGTGTTGGAAACACA...AATAGTGTCGGGTTTGGTGATTGTTAATGGGATGGATCTCCAGGTGGGGCAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR-3UTR GCA 90 bp | GACCAGGCTGGCCTCAAACTCAGAAATCCGCCCGCCTCTGCCTCACAAGTGCTGTGCGTACTCCCTCTTTaGTGTAAGATTCTTAAATTC | + |
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Preference number: 2 (lower is better) Translates to: DQAGLKLRNPPASASQVLCVLPL*CKILKF Trigger: GAATTTAAGAATCTTACAGCAAAGAGGGAGTACGCA...CAGCACTTGTGAGGCAGAGGCGGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129653.3 |
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| 3UTR-3UTR CCA 90 bp | GACCAGGCTGGCCTCAAACTCAGAAATCCGCCCGCCTCTGCCTCACAAGTGCTGTTTATGAAGAAGAGATaGACTTTCTCTAGGTCATCG | + |
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Preference number: 2 (lower is better) Translates to: DQAGLKLRNPPASASQVLFMKKR*TFSRSS Trigger: CGATGACCTAGAGAAAGTCCATCTCTTCTTCATAAA...CAGCACTTGTGAGGCAGAGGCGGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129653.3 |
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| 3UTR-3UTR CCA 90 bp | GCTCGAGCTTCGTATGTAGCAGAGGATGGCCTAGTTGGTCATCAATGGGAGGAGAGTTTTATAAGTCAGTaGCACCTGCACACCTGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: ARASYVAEDGLVGHQWEESFISQ*HLHTCL Trigger: CAGGCAGGTGTGCAGGTGCCACTGACTTATAAAACT...CTCCTCCCATTGATGACCAACTAGGCCATCCTCTGCTACATACGAAGCTCGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR-3UTR GCA 90 bp | GCTCGAGCTTCGTATGTAGCAGAGGATGGCCTAGTTGGTCATCAATGGGAGGAGGAGCAAGAGTTTAAGTaGGTACTCCCTCTTTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: ARASYVAEDGLVGHQWEEEQEFK*VLPLCC Trigger: ACAGCAAAGAGGGAGTACGCACTTAAACTCTTGCTC...CTCCTCCCATTGATGACCAACTAGGCCATCCTCTGCTACATACGAAGCTCGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR-3UTR GCA 90 bp | CATTGGACAGAGCACAGGGTCCCCAATGAAGTAGCTAGAGAAAGGACCCAAGGAAGGAGGACTGACTTTTaGGTTTGTGGCCATTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: HWTEHRVPNEVARERTQGRRTDF*VCGHSE Trigger: CTCAGAATGGCCACAAACGCAAAAGTCAGTCCTCCT...TCCTTGGGTCCTTTCTCTAGCTACTTCATTGGGGACCCTGTGCTCTGTCCAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR CAA 90 bp | CCCAATGGAGGAGTTAGAGAAAGGACTGAAGGACCTGAAGGGGGTTaGCAACCCATAGGAGGAACAACAATATCAATCAACGAGACCCTC | + |
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Preference number: 2 (lower is better) Translates to: PNGGVRERTEGPEGG*QPIGGTTISINETL Trigger: GAGGGTCTCGTTGATTGATATTGTTGTTCCTCCTATGGGTTGCAAACCCCCTTCAGGTCCTTCAGTCCTTTCTCTAACTCCTCCATTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145571.2 |
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| 3UTR-3UTR TCA 90 bp | CATTGGACAGAGCACAGGGTCCCCAATGAAGTAGCTAGAGAAAGGACCCAAGGACATAAAGGGTTGTCATaGTATGGTATCCCAACCCAC | + |
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Preference number: 2 (lower is better) Translates to: HWTEHRVPNEVARERTQGHKGLS*YGIPTH Trigger: GTGGGTTGGGATACCATATCATGACAACCCTTTATG...TCCTTGGGTCCTTTCTCTAGCTACTTCATTGGGGACCCTGTGCTCTGTCCAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR-3UTR GCA 90 bp | GACTGCCCCACCTGGAGATCCATCCCATTAACAATCACCAAACCCGACACTATTAGGAGGACTGACTTTTaGGTTTGTGGCCATTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: DCPTWRSIPLTITKPDTIRRTDF*VCGHSE Trigger: CTCAGAATGGCCACAAACGCAAAAGTCAGTCCTCCT...AATAGTGTCGGGTTTGGTGATTGTTAATGGGATGGATCTCCAGGTGGGGCAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR CAA 90 bp | TATCCTGGGAACGGTTCTTTCCCCAGTCATCTTGTGAAGCGCATCTaGAAACTGGTTGCCATATTCCAGCATATCCAACTCCACAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: YPGNGSFPSHLVKRI*KLVAIFQHIQLHSL Trigger: AAGGCTGTGGAGTTGGATATGCTGGAATATGGCAACCAGTTTCAAGATGCGCTTCACAAGATGACTGGGGAAAGAACCGTTCCCAGGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050491.11 |
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| 3UTR-3UTR TCA 90 bp | TGGATGCTCATAGCCATCCATTGGACAGAGCACAGGGTCCCCAATGAAGTAGCTCCACTCTCACTCTATTaGAACCTTTTGCTTTCTGAC | + |
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Preference number: 2 (lower is better) Translates to: WMLIAIHWTEHRVPNEVAPLSLY*NLLLSD Trigger: GTCAGAAAGCAAAAGGTTTCAATAGAGTGAGAGTGG...AGCTACTTCATTGGGGACCCTGTGCTCTGTCCAATGGATGGCTATGAGCATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR-3UTR TCA 90 bp | TGGATGCTCATAGCCATCCATTGGACAGAGCACAGGGTCCCCAATGAAGTAGCTCACTTAAAATATTCTTaGCCAGAGGCGGAAACCATG | + |
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Preference number: 2 (lower is better) Translates to: WMLIAIHWTEHRVPNEVAHLKYS*PEAETM Trigger: CATGGTTTCCGCCTCTGGTCAAGAATATTTTAAGTG...AGCTACTTCATTGGGGACCCTGTGCTCTGTCCAATGGATGGCTATGAGCATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR-3UTR GCA 90 bp | TCAATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGTTCTATGCCCCGGTATAGGGTCTATTGAAACCTTTTaGTTTCTGACCATGAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: SMGGEALGPVKVLCPGIGSIETF*FLTMKS Trigger: TGACTTCATGGTCAGAAAGCAAAAGGTTTCAATAGA...CCCTATACCGGGGCATAGAACCTTCACAGGACCAAGGGCCTCTCCTCCCATTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR-3UTR GCA 90 bp | ATGAAGAAGAGATGGACTTTCTCTAGGTCATCGGTCGGGAAGGTGAGGTTATCTGCTGTATCAGGACACTaGAGAGGAAGAAGAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: MKKRWTFSRSSVGKVRLSAVSGH*RGRRGR Trigger: TCTTCCTCTTCTTCCTCTGCAGTGTCCTGATACAGC...AGATAACCTCACCTTCCCGACCGATGACCTAGAGAAAGTCCATCTCTTCTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR-3UTR TCA 90 bp | TGGATGCTCATAGCCATCCATTGGACAGAGCACAGGGTCCCCAATGAAGTAGCTAGACTGAGTACTTTATaGAGAAGAGATGGACTTTCT | + |
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Preference number: 2 (lower is better) Translates to: WMLIAIHWTEHRVPNEVARLSTL*RRDGLS Trigger: AGAAAGTCCATCTCTTCTTCATAAAGTACTCAGTCT...AGCTACTTCATTGGGGACCCTGTGCTCTGTCCAATGGATGGCTATGAGCATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR-3UTR GCA 90 bp | TGGATGCTCATAGCCATCCATTGGACAGAGCACAGGGTCCCCAATGAAGTAGCTTGCGTACTCCCTCTTTaGTGTAAGATTCTTAAATTC | + |
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Preference number: 2 (lower is better) Translates to: WMLIAIHWTEHRVPNEVACVLPL*CKILKF Trigger: GAATTTAAGAATCTTACAGCAAAGAGGGAGTACGCA...AGCTACTTCATTGGGGACCCTGTGCTCTGTCCAATGGATGGCTATGAGCATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR-3UTR TCA 90 bp | ATGAAGAAGAGATGGACTTTCTCTAGGTCATCGGTCGGGAAGGTGAGGTTATCTCCACTCTCACTCTATTaGAACCTTTTGCTTTCTGAC | + |
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Preference number: 2 (lower is better) Translates to: MKKRWTFSRSSVGKVRLSPLSLY*NLLLSD Trigger: GTCAGAAAGCAAAAGGTTTCAATAGAGTGAGAGTGG...AGATAACCTCACCTTCCCGACCGATGACCTAGAGAAAGTCCATCTCTTCTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR-3UTR CCA 90 bp | CATTGGACAGAGCACAGGGTCCCCAATGAAGTAGCTAGAGAAAGGACCCAAGGAATATTATTACGTGGTTaGTGTAGCTGTGCATTTAAG | + |
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Preference number: 2 (lower is better) Translates to: HWTEHRVPNEVARERTQGILLRG*CSCAFK Trigger: CTTAAATGCACAGCTACACCAACCACGTAATAATAT...TCCTTGGGTCCTTTCTCTAGCTACTTCATTGGGGACCCTGTGCTCTGTCCAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR-3UTR CCA 90 bp | CATCTTGAAACTGGTTGCCATATTCCAGCATATCCAACTCCACAGCCTTGTAGTCATGGAAAATCTTCTTaGCCATGGAACAGTAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: HLETGCHIPAYPTPQPCSHGKSS*PWNSKS Trigger: GCTCTTACTGTTCCATGGCCAAGAAGATTTTCCATG...ACTACAAGGCTGTGGAGTTGGATATGCTGGAATATGGCAACCAGTTTCAAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050491.11 |
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| 3UTR-3UTR GCA 90 bp | TGTCAAGTTATCCAAAATGCAGTTGAAGTCCACGTAGGAAACATCTCTGACAGCTTTTATACCATCTCATaGTCAAAAACTGGCCAATCG | + |
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Preference number: 2 (lower is better) Translates to: CQVIQNAVEVHVGNISDSFYTIS*SKTGQS Trigger: CGATTGGCCAGTTTTTGAGCATGAGATGGTATAAAA...GCTGTCAGAGATGTTTCCTACGTGGACTTCAACTGCATTTTGGATAACTTGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR-3UTR GCA 90 bp | TGTCAAGTTATCCAAAATGCAGTTGAAGTCCACGTAGGAAACATCTCTGACAGCTCTATTGAAACCTTTTaGTTTCTGACCATGAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: CQVIQNAVEVHVGNISDSSIETF*FLTMKS Trigger: TGACTTCATGGTCAGAAAGCAAAAGGTTTCAATAGA...GCTGTCAGAGATGTTTCCTACGTGGACTTCAACTGCATTTTGGATAACTTGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR GCA 72 bp | GGTCCTGTGAAGGTTCTATGCCCCGGTATAGGGGAATaGCAGGGCCAGGAATGGGAGTGGGTGAGTTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: GPVKVLCPGIGE*QGQEWEWVSWG Trigger: CCCCCAACTCACCCACTCCCATTCCTGGCCCTGGCATTCCCCTATACCGGGGCATAGAACCTTCACAGGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR GCA 72 bp | ATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGTTCTATaGCCCGGTATAGGGGAATGCCAGGGCCAGGAATGG | + |
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Preference number: 3 (lower is better) Translates to: MGGEALGPVKVL*PGIGECQGQEW Trigger: CCATTCCTGGCCCTGGCATTCCCCTATACCGGGGCATAGAACCTTCACAGGACCAAGGGCCTCTCCTCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR CCA 72 bp | GGCTCGAGCTTCGTATGTAGCAGAGGATGGCCTAGTTaGTCATCAATGGGAGGAGAGGCCCTTGGTCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: GSSFVCSRGWPS*SSMGGEALGPV Trigger: CACAGGACCAAGGGCCTCTCCTCCCATTGATGACCAACTAGGCCATCCTCTGCTACATACGAAGCTCGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR-3UTR CAA 90 bp | GACTGCCCCACCTGGAGATCCATCCCATTAACAATCACCAAACCCGACACTATTGCTCATAGCCATCCATaGGACAGAGCACAGGGTCCC | + |
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Preference number: 3 (lower is better) Translates to: DCPTWRSIPLTITKPDTIAHSHP*DRAQGP Trigger: GGGACCCTGTGCTCTGTCCAATGGATGGCTATGAGC...AATAGTGTCGGGTTTGGTGATTGTTAATGGGATGGATCTCCAGGTGGGGCAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR-3UTR CAA 90 bp | CATTGGACAGAGCACAGGGTCCCCAATGAAGTAGCTAGAGAAAGGACCCAAGGAGAAGTCATTAGCAGCTaGATGCCCCAACTAGAAACT | + |
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Preference number: 3 (lower is better) Translates to: HWTEHRVPNEVARERTQGEVISS*MPQLET Trigger: AGTTTCTAGTTGGGGCATCAAGCTGCTAATGACTTC...TCCTTGGGTCCTTTCTCTAGCTACTTCATTGGGGACCCTGTGCTCTGTCCAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR-3UTR CAA 90 bp | TGGATGCTCATAGCCATCCATTGGACAGAGCACAGGGTCCCCAATGAAGTAGCTGAAGTCATTAGCAGCTaGATGCCCCAACTAGAAACT | + |
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Preference number: 3 (lower is better) Translates to: WMLIAIHWTEHRVPNEVAEVISS*MPQLET Trigger: AGTTTCTAGTTGGGGCATCAAGCTGCTAATGACTTC...AGCTACTTCATTGGGGACCCTGTGCTCTGTCCAATGGATGGCTATGAGCATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR TCA 72 bp | GGAAGGAGTTACAGAGATAAAGCATGGAGCAGAAACTaGACAAATGACCATCCAGAGACTGCCCCACCTGGA | + |
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Preference number: 3 (lower is better) Translates to: GRSYRDKAWSRN*TNDHPETAPPG Trigger: TCCAGGTGGGGCAGTCTCTGGATGGTCATTTGTTCAGTTTCTGCTCCATGCTTTATCTCTGTAACTCCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| 3UTR GCA 72 bp | CCCCAGTCATCTTGTGAAGCGCATCTTGAAACTGGTTaGCATATTCCAGCATATCCAACTCCACAGCCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: PQSSCEAHLETG*HIPAYPTPQPC Trigger: ACAAGGCTGTGGAGTTGGATATGCTGGAATATGGCAACCAGTTTCAAGATGCGCTTCACAAGATGACTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050491.11 |
||
| 3UTR-3UTR CAA 90 bp | CATTGGACAGAGCACAGGGTCCCCAATGAAGTAGCTAGAGAAAGGACCCAAGGAGCACTTAAAATATTCTaGACCAGAGGCGGAAACCAT | + |
|
Preference number: 3 (lower is better) Translates to: HWTEHRVPNEVARERTQGALKIF*TRGGNH Trigger: ATGGTTTCCGCCTCTGGTCAAGAATATTTTAAGTGC...TCCTTGGGTCCTTTCTCTAGCTACTTCATTGGGGACCCTGTGCTCTGTCCAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
||
| 3UTR-3UTR CAA 90 bp | GACTGCCCCACCTGGAGATCCATCCCATTAACAATCACCAAACCCGACACTATTACATTTCTGAACTGTTaGAAAAGCCCACTCTCACTC | + |
|
Preference number: 3 (lower is better) Translates to: DCPTWRSIPLTITKPDTITFLNC*KSPLSL Trigger: GAGTGAGAGTGGGCTTTTCAAACAGTTCAGAAATGT...AATAGTGTCGGGTTTGGTGATTGTTAATGGGATGGATCTCCAGGTGGGGCAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
||
| 3UTR TCA 72 bp | AGAGATGGACTTTCTCTAGGTCATCGGTCGGGAAGGTaGGGTTATCTAGTGAGGATTTCCTTGCTGTATCAG | + |
|
Preference number: 3 (lower is better) Translates to: RDGLSLGHRSGR*GYLVRISLLYQ Trigger: CTGATACAGCAAGGAAATCCTCACTAGATAACCTCACCTTCCCGACCGATGACCTAGAGAAAGTCCATCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
||
| 3UTR TCA 72 bp | GGGACTCAGACAGACTACCTGAGACTGAGTACTTTATaGAGAAGAGATGGACTTTCTCTAGGTCATCGGTCG | + |
|
Preference number: 3 (lower is better) Translates to: GTQTDYLRLSTL*RRDGLSLGHRS Trigger: CGACCGATGACCTAGAGAAAGTCCATCTCTTCTTCATAAAGTACTCAGTCTCAGGTAGTCTGTCTGAGTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
||
| 3UTR CCA 72 bp | AGACTACCTGAGACTGAGTACTTTATGAAGAAGAGATaGACTTTCTCTAGGTCATCGGTCGGGAAGGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: RLPETEYFMKKR*TFSRSSVGKVR Trigger: CCTCACCTTCCCGACCGATGACCTAGAGAAAGTCCATCTCTTCTTCATAAAGTACTCAGTCTCAGGTAGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
||
| 3UTR GCA 72 bp | CAATTTCCCTTCTTTGTGAAGCCTGTGAGTGTCCGCTaGGCCTCCAATAAATCGTCCATTGACAAATATCCT | + |
|
Preference number: 3 (lower is better) Translates to: QFPFFVKPVSVR*ASNKSSIDKYP Trigger: AGGATATTTGTCAATGGACGATTTATTGGAGGCGCAGCGGACACTCACAGGCTTCACAAAGAAGGGAAATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050491.11 |
||
| 3UTR-3UTR CAA 90 bp | TCTTTCCCCAGTCATCTTGTGAAGCGCATCTTGAAACTGGTTGCCATATTCCAGAAGAGCAGGATGTTTTaGAGAAGATCACCACACAAT | + |
|
Preference number: 3 (lower is better) Translates to: SFPSHLVKRILKLVAIFQKSRMF*RRSPHN Trigger: ATTGTGTGGTGATCTTCTCAAAAACATCCTGCTCTT...CTGGAATATGGCAACCAGTTTCAAGATGCGCTTCACAAGATGACTGGGGAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050491.11 |
||
| 3UTR TCA 72 bp | TACCATCTCATGCTCAAAAACTGGCCAATCGGGAGATaGAGGGTCCAGGGCAATTTATTGTTCATTATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: YHLMLKNWPIGR*RVQGNLLFIIL Trigger: CAGAATAATGAACAATAAATTGCCCTGGACCCTTCATCTCCCGATTGGCCAGTTTTTGAGCATGAGATGGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050491.11 ENSMUST00000129653.3 ENSMUST00000185362.7 |
||
| 3UTR TCA 72 bp | AGTATGTTTGGTGGTCTAGAACATAAAGGGTTGTCATaGTATGGTATCCCAACCCACTGCACATCTGTACCA | + |
|
Preference number: 3 (lower is better) Translates to: SMFGGLEHKGLS*YGIPTHCTSVP Trigger: TGGTACAGATGTGCAGTGGGTTGGGATACCATATCATGACAACCCTTTATGTTCTAGACCACCAAACATACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050491.11 ENSMUST00000129653.3 ENSMUST00000185362.7 |
||
| 3UTR GCA 72 bp | TTAATTCCTGAATGCCATGGGGAGCAAGAGTTTAAGTaGGTACTCCCTCTTTGCTGTAAGATTCTTAAATTC | + |
|
Preference number: 3 (lower is better) Translates to: LIPECHGEQEFK*VLPLCCKILKF Trigger: GAATTTAAGAATCTTACAGCAAAGAGGGAGTACGCACTTAAACTCTTGCTCCCCATGGCATTCAGGAATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050491.11 ENSMUST00000129653.3 ENSMUST00000185362.7 |
||
| 3UTR CCA 72 bp | GATAAAACATTCTTAAGAATTAGTTGTATAGCTAAGTaGTATATTAGCCCAGTGGATATTAGCCCAGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: DKTFLRISCIAK*YISPVDISPEA Trigger: AGCTTCTGGGCTAATATCCACTGGGCTAATATACCACTTAGCTATACAACTAATTCTTAAGAATGTTTTATC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
||
| CDS-3UTR TCA 90 bp | CCACAAATACTCATGACATCATCCCCTGCCTCATGCCAGTCTGTCTCTGTCTCTCAGGAGCAGCAGAGCTaGGACTGTACTCACGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PQILMTSSPASCQSVSVSQEQQS*DCTHGS Trigger: AGAACCGTGAGTACAGTCTCAGCTCTGCTGCTCCTG...AGAGACAGAGACAGACTGGCATGAGGCAGGGGATGATGTCATGAGTATTTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145571.2 |
||
| CDS-3UTR TCA 90 bp | AGTGTCCGCTGCGCCTCCAATAAATCGTCCATTGACAAATATCCTGGGAACGGTGAAATTGTTTCCGTGTaGGCTATTTCTTCTTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SVRCASNKSSIDKYPGNGEIVSV*AISSSS Trigger: CGAGGAAGAAGAAATAGCTCACACGGAAACAATTTC...ACCGTTCCCAGGATATTTGTCAATGGACGATTTATTGGAGGCGCAGCGGACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050491.11 |
||
| CDS-3UTR TCA 90 bp | GACTGCCCCACCTGGAGATCCATCCCATTAACAATCACCAAACCCGACACTATTCCACAGCCTTGTAGTTaGCATTCATGTCATGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: DCPTWRSIPLTITKPDTIPQPCS*HSCHGK Trigger: TTTTCCATGACATGAATGTCAACTACAAGGCTGTGG...AATAGTGTCGGGTTTGGTGATTGTTAATGGGATGGATCTCCAGGTGGGGCAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
||
| CDS-3UTR GCA 90 bp | TGGATGCTCATAGCCATCCATTGGACAGAGCACAGGGTCCCCAATGAAGTAGCTCATCTTGAAACTGGTTaGCATATTCCAGCATATCCA | + |
|
Preference number: 4 (lower is better) Translates to: WMLIAIHWTEHRVPNEVAHLETG*HIPAYP Trigger: TGGATATGCTGGAATATGGCAACCAGTTTCAAGATG...AGCTACTTCATTGGGGACCCTGTGCTCTGTCCAATGGATGGCTATGAGCATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
||
| CDS-3UTR TCA 90 bp | ACAGAAGTGATTTTAGGGACGCTCCATCTGTGGGACTCAGACAGACTACCTGAGAGAGCAGGATGTTTTTaGGAAGATCACCACACAATT | + |
|
Preference number: 4 (lower is better) Translates to: TEVILGTLHLWDSDRLPERAGCF*EDHHTI Trigger: AATTGTGTGGTGATCTTCTCAAAAACATCCTGCTCT...CTCAGGTAGTCTGTCTGAGTCCCACAGATGGAGCGTCCCTAAAATCACTTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
||
| CDS-3UTR TCA 90 bp | AATACTCATGACATCATCCCCTGCCTCATGCCAGTCTGTCTCTGTCTCTTGTCTCCACAGCCTTGTAGTTaGCATTCATGTCATGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: NTHDIIPCLMPVCLCLLSPQPCS*HSCHGK Trigger: TTTTCCATGACATGAATGTCAACTACAAGGCTGTGG...AGACAAGAGACAGAGACAGACTGGCATGAGGCAGGGGATGATGTCATGAGTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145571.2 |
||
| CDS-3UTR GCA 90 bp | GGTTCCACAAATACTCATGACATCATCCCCTGCCTCATGCCAGTCTGTCTCTGTCATCTTGAAACTGGTTaGCATATTCCAGCATATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSTNTHDIIPCLMPVCLCHLETG*HIPAYP Trigger: TGGATATGCTGGAATATGGCAACCAGTTTCAAGATG...ACAGAGACAGACTGGCATGAGGCAGGGGATGATGTCATGAGTATTTGTGGAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145571.2 |
||
| CDS-3UTR CCA 90 bp | TCTAGGTCATCGGTCGGGAAGGTGAGGTTATCTAGTGAGGATTTCCTTGCTGTACATGGAAAATCTTCTTaGCCATGGAACAGTAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRSSVGKVRLSSEDFLAVHGKSS*PWNSKS Trigger: GCTCTTACTGTTCCATGGCCAAGAAGATTTTCCATG...TACAGCAAGGAAATCCTCACTAGATAACCTCACCTTCCCGACCGATGACCTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
||
| 3UTR CAA 72 bp | AACGGTTCTTTCCCCAGTCATCTTGTGAAGCGCATCTaGAAACTGGTTGCCATATTCCAGCATATCCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: NGSFPSHLVKRI*KLVAIFQHIQL Trigger: GAGTTGGATATGCTGGAATATGGCAACCAGTTTCAAGATGCGCTTCACAAGATGACTGGGGAAAGAACCGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050491.11 |
||
| 3UTR CAA 72 bp | GGAGTTAGAGAAAGGACTGAAGGACCTGAAGGGGGTTaGCAACCCATAGGAGGAACAACAATATCAATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: GVRERTEGPEGG*QPIGGTTISIN Trigger: GTTGATTGATATTGTTGTTCCTCCTATGGGTTGCAAACCCCCTTCAGGTCCTTCAGTCCTTTCTCTAACTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145571.2 |
||
| CDS-3UTR CCA 90 bp | TCTAGGTCATCGGTCGGGAAGGTGAGGTTATCTAGTGAGGATTTCCTTGCTGTAATTGTTTCTTGGATCTaGTTCACAGGAGTAGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SRSSVGKVRLSSEDFLAVIVSWI*FTGVVV Trigger: TACAACTACTCCTGTGAACCAGATCCAAGAAACAAT...TACAGCAAGGAAATCCTCACTAGATAACCTCACCTTCCCGACCGATGACCTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
||
| CDS-3UTR CCA 90 bp | ACAAATACTCATGACATCATCCCCTGCCTCATGCCAGTCTGTCTCTGTCTCTTGATTGTTTCTTGGATCTaGTTCACAGGAGTAGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TNTHDIIPCLMPVCLCLLIVSWI*FTGVVV Trigger: TACAACTACTCCTGTGAACCAGATCCAAGAAACAAT...CAAGAGACAGAGACAGACTGGCATGAGGCAGGGGATGATGTCATGAGTATTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145571.2 |
||
| CDS-3UTR TCA 90 bp | CCCAACCCACTGCACATCTGTACCACATTAAATTTTAAGGAAGCCACATGTCAGAGAGCAGGATGTTTTTaGGAAGATCACCACACAATT | + |
|
Preference number: 4 (lower is better) Translates to: PNPLHICTTLNFKEATCQRAGCF*EDHHTI Trigger: AATTGTGTGGTGATCTTCTCAAAAACATCCTGCTCT...CTGACATGTGGCTTCCTTAAAATTTAATGTGGTACAGATGTGCAGTGGGTTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
||
| CDS-3UTR CCA 90 bp | ATGAAGAAGAGATGGACTTTCTCTAGGTCATCGGTCGGGAAGGTGAGGTTATCTATTGTTTCTTGGATCTaGTTCACAGGAGTAGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: MKKRWTFSRSSVGKVRLSIVSWI*FTGVVV Trigger: TACAACTACTCCTGTGAACCAGATCCAAGAAACAAT...AGATAACCTCACCTTCCCGACCGATGACCTAGAGAAAGTCCATCTCTTCTTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
||
| CDS-3UTR CCA 90 bp | ACAAATACTCATGACATCATCCCCTGCCTCATGCCAGTCTGTCTCTGTCTCTTGTTAGAAATTGTTTCTTaGATCTGGTTCACAGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: TNTHDIIPCLMPVCLCLLLEIVS*IWFTGV Trigger: TACTCCTGTGAACCAGATCCAAGAAACAATTTCTAA...CAAGAGACAGAGACAGACTGGCATGAGGCAGGGGATGATGTCATGAGTATTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145571.2 |
||
| CDS-3UTR CCA 90 bp | ATGAAGAAGAGATGGACTTTCTCTAGGTCATCGGTCGGGAAGGTGAGGTTATCTTTAGAAATTGTTTCTTaGATCTGGTTCACAGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: MKKRWTFSRSSVGKVRLSLEIVS*IWFTGV Trigger: TACTCCTGTGAACCAGATCCAAGAAACAATTTCTAA...AGATAACCTCACCTTCCCGACCGATGACCTAGAGAAAGTCCATCTCTTCTTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
||
| CDS-3UTR CCA 90 bp | ATCAACGAGACCCTCCAAAAGGATCTTAAGGTTCCACAAATACTCATGACATCACATGGAAAATCTTCTTaGCCATGGAACAGTAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: INETLQKDLKVPQILMTSHGKSS*PWNSKS Trigger: GCTCTTACTGTTCCATGGCCAAGAAGATTTTCCATG...TGATGTCATGAGTATTTGTGGAACCTTAAGATCCTTTTGGAGGGTCTCGTTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145571.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCCTACCAACATGACAGCTTAAATCAGGAGAGCTGTCTTAACTTCTATGTCCATGGAAAATCTTCTTaGCCATGGAACAGTAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSYQHDSLNQESCLNFYVHGKSS*PWNSKS Trigger: GCTCTTACTGTTCCATGGCCAAGAAGATTTTCCATG...GACATAGAAGTTAAGACAGCTCTCCTGATTTAAGCTGTCATGTTGGTAGGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
||
| CDS-3UTR TCA 90 bp | ATCAACGAGACCCTCCAAAAGGATCTTAAGGTTCCACAAATACTCATGACATCAAGAGCAGGATGTTTTTaGGAAGATCACCACACAATT | + |
|
Preference number: 4 (lower is better) Translates to: INETLQKDLKVPQILMTSRAGCF*EDHHTI Trigger: AATTGTGTGGTGATCTTCTCAAAAACATCCTGCTCT...TGATGTCATGAGTATTTGTGGAACCTTAAGATCCTTTTGGAGGGTCTCGTTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145571.2 |
||
| CDS-3UTR TCA 90 bp | ATTCTGAATCATCTTTATGAAGGCAATCCACACACTGAAAACAGCCTCAAGTCACCACAGCCTTGTAGTTaGCATTCATGTCATGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ILNHLYEGNPHTENSLKSPQPCS*HSCHGK Trigger: TTTTCCATGACATGAATGTCAACTACAAGGCTGTGG...TGACTTGAGGCTGTTTTCAGTGTGTGGATTGCCTTCATAAAGATGATTCAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111957.10 ENSMUST00000129653.3 ENSMUST00000145969.8 ENSMUST00000185362.7 |
||
| CDS-3UTR CCA 90 bp | ATTCTGAATCATCTTTATGAAGGCAATCCACACACTGAAAACAGCCTCAAGTCATCACTCACTTGGATCTaGTTCACAGGAGTAGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ILNHLYEGNPHTENSLKSSLTWI*FTGVVV Trigger: TACAACTACTCCTGTGAACCAGATCCAAGTGAGTGA...TGACTTGAGGCTGTTTTCAGTGTGTGGATTGCCTTCATAAAGATGATTCAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050491.11 |
||
| CDS-3UTR CCA 90 bp | ATTCTGAATCATCTTTATGAAGGCAATCCACACACTGAAAACAGCCTCAAGTCACATGGAAAATCTTCTTaGCCATGGAACAGTAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ILNHLYEGNPHTENSLKSHGKSS*PWNSKS Trigger: GCTCTTACTGTTCCATGGCCAAGAAGATTTTCCATG...TGACTTGAGGCTGTTTTCAGTGTGTGGATTGCCTTCATAAAGATGATTCAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000111957.10 ENSMUST00000129653.3 ENSMUST00000145969.8 ENSMUST00000185362.7 |
||
| 3UTR CAA 72 bp | GTGGTTGGTGTAGCTGTGCATTTAAGTAACCTGCCTTaGACCTTACATCCTAATAAGATTACTAGTGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: VVGVAVHLSNLP*TLHPNKITSDN Trigger: GTTGTCACTAGTAATCTTATTAGGATGTAAGGTCAAAGGCAGGTTACTTAAATGCACAGCTACACCAACCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
||
| CDS-3UTR TCA 90 bp | ATTCTGAATCATCTTTATGAAGGCAATCCACACACTGAAAACAGCCTCAAGTCAAGAGCAGGATGTTTTTaGGAAGATCACCACACAATT | + |
|
Preference number: 4 (lower is better) Translates to: ILNHLYEGNPHTENSLKSRAGCF*EDHHTI Trigger: AATTGTGTGGTGATCTTCTCAAAAACATCCTGCTCT...TGACTTGAGGCTGTTTTCAGTGTGTGGATTGCCTTCATAAAGATGATTCAGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000111957.10 ENSMUST00000129653.3 ENSMUST00000145969.8 ENSMUST00000185362.7 |
||
| CDS-3UTR TCA 90 bp | ATCAACGAGACCCTCCAAAAGGATCTTAAGGTTCCACAAATACTCATGACATCACTGTTTCATATTCTATaGGGCTGGTTTCTTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: INETLQKDLKVPQILMTSLFHIL*GWFLCR Trigger: TCTACAAAGAAACCAGCCTCATAGAATATGAAACAG...TGATGTCATGAGTATTTGTGGAACCTTAAGATCCTTTTGGAGGGTCTCGTTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145571.2 |
||
| CDS-3UTR GCA 90 bp | ATTCTGAATCATCTTTATGAAGGCAATCCACACACTGAAAACAGCCTCAAGTCACATCTTGAAACTGGTTaGCATATTCCAGCATATCCA | + |
|
Preference number: 4 (lower is better) Translates to: ILNHLYEGNPHTENSLKSHLETG*HIPAYP Trigger: TGGATATGCTGGAATATGGCAACCAGTTTCAAGATG...TGACTTGAGGCTGTTTTCAGTGTGTGGATTGCCTTCATAAAGATGATTCAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111957.10 ENSMUST00000129653.3 ENSMUST00000145969.8 ENSMUST00000185362.7 |
||
| CDS-3UTR GCA 90 bp | TACCAACATGACAGCTTAAATCAGGAGAGCTGTCTTAACTTCTATGTCAAGTTACATCTTGAAACTGGTTaGCATATTCCAGCATATCCA | + |
|
Preference number: 4 (lower is better) Translates to: YQHDSLNQESCLNFYVKLHLETG*HIPAYP Trigger: TGGATATGCTGGAATATGGCAACCAGTTTCAAGATG...TAACTTGACATAGAAGTTAAGACAGCTCTCCTGATTTAAGCTGTCATGTTGGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
||
| CDS-3UTR CCA 90 bp | ATTCTGAATCATCTTTATGAAGGCAATCCACACACTGAAAACAGCCTCAAGTCAATTGTTTCTTGGATCTaGTTCACAGGAGTAGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ILNHLYEGNPHTENSLKSIVSWI*FTGVVV Trigger: TACAACTACTCCTGTGAACCAGATCCAAGAAACAAT...TGACTTGAGGCTGTTTTCAGTGTGTGGATTGCCTTCATAAAGATGATTCAGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111957.10 ENSMUST00000129653.3 ENSMUST00000145969.8 ENSMUST00000185362.7 |
||
| CDS-3UTR CCA 90 bp | CTTTCCTACCAACATGACAGCTTAAATCAGGAGAGCTGTCTTAACTTCTATGTCTTAGAAATTGTTTCTTaGATCTGGTTCACAGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSYQHDSLNQESCLNFYVLEIVS*IWFTGV Trigger: TACTCCTGTGAACCAGATCCAAGAAACAATTTCTAA...GACATAGAAGTTAAGACAGCTCTCCTGATTTAAGCTGTCATGTTGGTAGGAAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
||
| CDS-3UTR CCA 90 bp | ATTCTGAATCATCTTTATGAAGGCAATCCACACACTGAAAACAGCCTCAAGTCATTAGAAATTGTTTCTTaGATCTGGTTCACAGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ILNHLYEGNPHTENSLKSLEIVS*IWFTGV Trigger: TACTCCTGTGAACCAGATCCAAGAAACAATTTCTAA...TGACTTGAGGCTGTTTTCAGTGTGTGGATTGCCTTCATAAAGATGATTCAGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111957.10 ENSMUST00000129653.3 ENSMUST00000145969.8 ENSMUST00000185362.7 |
||
| CDS-3UTR CAA 90 bp | GGCCTCAAACTCAGAAATCCGCCCGCCTCTGCCTCACAAGTGCTGGGATTAAAGAAGAGCAGGATGTTTTaGAGAAGATCACCACACAAT | + |
|
Preference number: 5 (lower is better) Translates to: GLKLRNPPASASQVLGLKKSRMF*RRSPHN Trigger: ATTGTGTGGTGATCTTCTCAAAAACATCCTGCTCTT...CTTTAATCCCAGCACTTGTGAGGCAGAGGCGGGCGGATTTCTGAGTTTGAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129653.3 |
||
| CDS-3UTR CAA 90 bp | ACCCTCCAAAAGGATCTTAAGGTTCCACAAATACTCATGACATCATCCCCTGCCATGTCAGGCTTGCTTTaGCTAGCAGGAAAGTCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: TLQKDLKVPQILMTSSPAMSGLL*LAGKSS Trigger: ACTAGACTTTCCTGCTAGCAAAAGCAAGCCTGACAT...GGCAGGGGATGATGTCATGAGTATTTGTGGAACCTTAAGATCCTTTTGGAGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145571.2 |
||
| CDS-3UTR CAA 90 bp | ACCCTCCAAAAGGATCTTAAGGTTCCACAAATACTCATGACATCATCCCCTGCCGTTAGAAATTGTTTCTaGGATCTGGTTCACAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: TLQKDLKVPQILMTSSPAVRNCF*DLVHRS Trigger: ACTCCTGTGAACCAGATCCAAGAAACAATTTCTAAC...GGCAGGGGATGATGTCATGAGTATTTGTGGAACCTTAAGATCCTTTTGGAGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145571.2 |
||
| CDS-3UTR CAA 90 bp | ATGAAGAAGAGATGGACTTTCTCTAGGTCATCGGTCGGGAAGGTGAGGTTATCTGTTAGAAATTGTTTCTaGGATCTGGTTCACAGGAGT | + |
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Preference number: 5 (lower is better) Translates to: MKKRWTFSRSSVGKVRLSVRNCF*DLVHRS Trigger: ACTCCTGTGAACCAGATCCAAGAAACAATTTCTAAC...AGATAACCTCACCTTCCCGACCGATGACCTAGAGAAAGTCCATCTCTTCTTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129653.3 ENSMUST00000185362.7 |
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| CDS-3UTR CAA 90 bp | ATTCTGAATCATCTTTATGAAGGCAATCCACACACTGAAAACAGCCTCAAGTCAGTTAGAAATTGTTTCTaGGATCTGGTTCACAGGAGT | + |
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Preference number: 5 (lower is better) Translates to: ILNHLYEGNPHTENSLKSVRNCF*DLVHRS Trigger: ACTCCTGTGAACCAGATCCAAGAAACAATTTCTAAC...TGACTTGAGGCTGTTTTCAGTGTGTGGATTGCCTTCATAAAGATGATTCAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111957.10 ENSMUST00000129653.3 ENSMUST00000145969.8 ENSMUST00000185362.7 |
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| CDS-3UTR CAA 90 bp | ATTCTGAATCATCTTTATGAAGGCAATCCACACACTGAAAACAGCCTCAAGTCAAAGAGCAGGATGTTTTaGAGAAGATCACCACACAAT | + |
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Preference number: 5 (lower is better) Translates to: ILNHLYEGNPHTENSLKSKSRMF*RRSPHN Trigger: ATTGTGTGGTGATCTTCTCAAAAACATCCTGCTCTT...TGACTTGAGGCTGTTTTCAGTGTGTGGATTGCCTTCATAAAGATGATTCAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000111957.10 ENSMUST00000129653.3 ENSMUST00000145969.8 ENSMUST00000185362.7 |
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| CDS TCA 90 bp | ATGGAAAATCTTCTTGGCCATGGAACAGTAAGAGCAGGATGTTTTTaGGAAGATCACCACACAATTGTTAGAAATTGTTTCTTGGATCTG | + |
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Preference number: 5 (lower is better) Translates to: MENLLGHGTVRAGCF*EDHHTIVRNCFLDL Trigger: CAGATCCAAGAAACAATTTCTAACAATTGTGTGGTGATCTTCTCAAAAACATCCTGCTCTTACTGTTCCATGGCCAAGAAGATTTTCCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000111957.10 ENSMUST00000129653.3 ENSMUST00000145571.2 ENSMUST00000145969.8 ENSMUST00000185362.7 |
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| CDS TCA 72 bp | GGTATGGCACCAACCCATCTCCAGGAGCAGCAGAGCTaGGACTGTACTCACGGTTCTTTCCCCAGTCATCTT | + |
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Preference number: 6 (lower is better) Translates to: GMAPTHLQEQQS*DCTHGSFPSHL Trigger: AAGATGACTGGGGAAAGAACCGTGAGTACAGTCTCAGCTCTGCTGCTCCTGGAGATGGGTTGGTGCCATACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145571.2 |
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| CDS CAA 90 bp | GACTGTACTCACGGTTCTTTCCCCAGTCATCTTGTGAAGCGCATCTaGAAACTGGTTGCCATATTCCAGCATATCCAACTCCACAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: DCTHGSFPSHLVKRI*KLVAIFQHIQLHSL Trigger: AAGGCTGTGGAGTTGGATATGCTGGAATATGGCAACCAGTTTCAAGATGCGCTTCACAAGATGACTGGGGAAAGAACCGTGAGTACAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145571.2 |
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| CDS CAA 72 bp | CACGGTTCTTTCCCCAGTCATCTTGTGAAGCGCATCTaGAAACTGGTTGCCATATTCCAGCATATCCAACTC | + |
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Preference number: 6 (lower is better) Translates to: HGSFPSHLVKRI*KLVAIFQHIQL Trigger: GAGTTGGATATGCTGGAATATGGCAACCAGTTTCAAGATGCGCTTCACAAGATGACTGGGGAAAGAACCGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145571.2 |
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| CDS CCA 72 bp | GAGAAGATCACCACACAATTGTTAGAAATTGTTTCTTaGATCTGGTTCACAGGAGTAGTTGTAGACTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: EKITTQLLEIVS*IWFTGVVVDFP Trigger: GGGGAAGTCTACAACTACTCCTGTGAACCAGATCCAAGAAACAATTTCTAACAATTGTGTGGTGATCTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111957.10 ENSMUST00000129653.3 ENSMUST00000145571.2 ENSMUST00000145969.8 ENSMUST00000185362.7 |
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