Pregenerated sensors for GLRX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021591Ensembl transcript IDs: ENSMUST00000022082.8, ENSMUST00000220523.2, ENSMUST00000223120.2
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTAGAGACATGTTGGCACATGAAGAATGGATAATCAAACCAGTGTaGTCTGTTAAGCTTCTCGGCCCCATGGTTAGGGGCAAATTGCAA | + |
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Preference number: 1 (lower is better) Translates to: GRDMLAHEEWIIKPV*SVKLLGPMVRGKLQ Trigger: TTGCAATTTGCCCCTAACCATGGGGCCGAGAAGCTTAACAGACCACACTGGTTTGATTATCCATTCTTCATGTGCCAACATGTCTCTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022082.8 ENSMUST00000223120.2 |
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| 3UTR-3UTR GCA 90 bp | GAGACCAGAGAAGTGATCTACAGATCCATGAGAATTAAACAGCATAGCAAGACAACAGAGGGAGCTGCATaGACCATCTGCTCTGCCGCC | + |
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Preference number: 2 (lower is better) Translates to: ETREVIYRSMRIKQHSKTTEGAA*TICSAA Trigger: GGCGGCAGAGCAGATGGTGCATGCAGCTCCCTCTGT...TGTCTTGCTATGCTGTTTAATTCTCATGGATCTGTAGATCACTTCTCTGGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022082.8 ENSMUST00000223120.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGAAAAATCCCAGTCACCAGGAAATACTGACATCCTCTGCGATGCACATCAAACAGCTGTGTCAGCATaGACTCTGCCTGGCAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: VEKSQSPGNTDILCDAHQTAVSA*TLPGKR Trigger: TCTCTTGCCAGGCAGAGTCCATGCTGACACAGCTGT...TTGATGTGCATCGCAGAGGATGTCAGTATTTCCTGGTGACTGGGATTTTTCAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223120.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTGGACAATTAATCACCTTTACAGAGGGAGCTGCATGCACCATCTGCTCTGCTGGACTTCTGCAAAATaGCTTCAGCTGACGAACAGT | + |
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Preference number: 2 (lower is better) Translates to: FWTINHLYRGSCMHHLLCWTSAK*LQLTNS Trigger: ACTGTTCGTCAGCTGAAGTCATTTTGCAGAAGTCCA...GCAGAGCAGATGGTGCATGCAGCTCCCTCTGTAAAGGTGATTAATTGTCCAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022082.8 ENSMUST00000223120.2 |
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| 3UTR-3UTR GCA 90 bp | TGTTTAGGACAATGTTTCAGAAACAACGTCTTTCACAAAAATTCTTGGAAGGAGCAGGAGTGGGAAGGGTaGGTGCACGAGGGAGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: CLGQCFRNNVFHKNSWKEQEWEG*VHEGER Trigger: CCTCTCTCCCTCGTGCACGCACCCTTCCCACTCCTG...CTCCTTCCAAGAATTTTTGTGAAAGACGTTGTTTCTGAAACATTGTCCTAAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022082.8 ENSMUST00000223120.2 |
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| 3UTR-3UTR CCA 90 bp | GAGACCAGAGAAGTGATCTACAGATCCATGAGAATTAAACAGCATAGCAAGACAAGCATGGACTCTGCCTaGCAAGAGAGAAAGAACTGC | + |
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Preference number: 2 (lower is better) Translates to: ETREVIYRSMRIKQHSKTSMDSA*QERKNC Trigger: GCAGTTCTTTCTCTCTTGCCAGGCAGAGTCCATGCT...TGTCTTGCTATGCTGTTTAATTCTCATGGATCTGTAGATCACTTCTCTGGTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223120.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGACCAGAGAAGTGATCTACAGATCCATGAGAATTAAACAGCATAGCAAGCAGCAACAGATCCACTaGAGATTTAGAGCAACTGGA | + |
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Preference number: 2 (lower is better) Translates to: LETREVIYRSMRIKQHSKQQQIH*RFRATG Trigger: TCCAGTTGCTCTAAATCTCCAGTGGATCTGTTGCTG...CTTGCTATGCTGTTTAATTCTCATGGATCTGTAGATCACTTCTCTGGTCTCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022082.8 ENSMUST00000223120.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAAGTTTGGATGGAAGAAACTGTTTAGGACAATGTTTCAGAAACAACGTCTTCACTGGCCATCAGCATaGTTAGACAGCTGTGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: SKFGWKKLFRTMFQKQRLHWPSA*LDSCVS Trigger: GCTGACACAGCTGTCTAACCATGCTGATGGCCAGTG...AAGACGTTGTTTCTGAAACATTGTCCTAAACAGTTTCTTCCATCCAAACTTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022082.8 ENSMUST00000223120.2 |
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| 3UTR-3UTR CCA 90 bp | TGTTTAGGACAATGTTTCAGAAACAACGTCTTTCACAAAAATTCTTGGAAGGAGCACTGGCCATCAGCATaGTTAGACAGCTGTGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: CLGQCFRNNVFHKNSWKEHWPSA*LDSCVS Trigger: GCTGACACAGCTGTCTAACCATGCTGATGGCCAGTG...CTCCTTCCAAGAATTTTTGTGAAAGACGTTGTTTCTGAAACATTGTCCTAAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022082.8 ENSMUST00000223120.2 |
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| 3UTR-3UTR GCA 90 bp | TCAAAGTTTGGATGGAAGAAACTGTTTAGGACAATGTTTCAGAAACAACGTCTTGGAGAGAGGAGCCGATaGATGACTCAGGAAACAAAT | + |
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Preference number: 2 (lower is better) Translates to: SKFGWKKLFRTMFQKQRLGERSR*MTQETN Trigger: ATTTGTTTCCTGAGTCATGCATCGGCTCCTCTCTCC...AAGACGTTGTTTCTGAAACATTGTCCTAAACAGTTTCTTCCATCCAAACTTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022082.8 ENSMUST00000223120.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTATAGATACATCTTTAATAGTAATGAATCCTCCTCACTGGAGACCAGAGAAAGACATGTTGGCACATaGAGAATGGATAATCAAACC | + |
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Preference number: 2 (lower is better) Translates to: IYRYIFNSNESSSLETRERHVGT*RMDNQT Trigger: GGTTTGATTATCCATTCTTCATGTGCCAACATGTCT...TTCTCTGGTCTCCAGTGAGGAGGATTCATTACTATTAAAGATGTATCTATAGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022082.8 ENSMUST00000223120.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTACAGATCCATGAGAATTAAACAGCATAGCAAGACATCAAAGCAAAATGTCCTGCTTGGGATTTTCTaGACAATTAATCACCTTTAC | + |
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Preference number: 2 (lower is better) Translates to: IYRSMRIKQHSKTSKQNVLLGIF*TINHLY Trigger: GTAAAGGTGATTAATTGTCCAGAAAATCCCAAGCAG...GACATTTTGCTTTGATGTCTTGCTATGCTGTTTAATTCTCATGGATCTGTAGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022082.8 ENSMUST00000223120.2 |
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| 3UTR CCA 72 bp | ATGCACATCAACTCTCAGGGGCACTGGCCATCAGCATaGTTAGACAGCTGTGTCAGCATGGACTCTGCCTGC | + |
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Preference number: 3 (lower is better) Translates to: MHINSQGHWPSA*LDSCVSMDSAC Trigger: GCAGGCAGAGTCCATGCTGACACAGCTGTCTAACCATGCTGATGGCCAGTGCCCCTGAGAGTTGATGTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022082.8 |
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| 3UTR CCA 72 bp | ATGCACATCAACTCTCAGGGGCACTGGCCATCAGCATaGTTAGACAGCTGTGTCAGCATGGACTCTGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: MHINSQGHWPSA*LDSCVSMDSAW Trigger: CCAGGCAGAGTCCATGCTGACACAGCTGTCTAACCATGCTGATGGCCAGTGCCCCTGAGAGTTGATGTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223120.2 |
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| 3UTR GCA 72 bp | GAAAAATCCCAGTCACCAGGAAATACTGACATCCTCTaGGATGCACATCAACTCTCAGGGGCACTGGCCATC | + |
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Preference number: 3 (lower is better) Translates to: EKSQSPGNTDIL*DAHQLSGALAI Trigger: GATGGCCAGTGCCCCTGAGAGTTGATGTGCATCGCAGAGGATGTCAGTATTTCCTGGTGACTGGGATTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022082.8 ENSMUST00000220523.2 ENSMUST00000223120.2 |
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| 3UTR CCA 72 bp | ATGTTGGCACATGAAGAATGGATAATCAAACCAGTGTaGTCTGTTAAGCTTCTCGGCCCCATGGTTAGGGGC | + |
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Preference number: 3 (lower is better) Translates to: MLAHEEWIIKPV*SVKLLGPMVRG Trigger: GCCCCTAACCATGGGGCCGAGAAGCTTAACAGACCACACTGGTTTGATTATCCATTCTTCATGTGCCAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022082.8 ENSMUST00000223120.2 |
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| 3UTR CCA 72 bp | CTAACTCGGATCAACACACAGCTGCTTGGGATTTTCTaGACAATTAATCACCTTTACAGAGGGAGCTGCATG | + |
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Preference number: 3 (lower is better) Translates to: LTRINTQLLGIF*TINHLYRGSCM Trigger: CATGCAGCTCCCTCTGTAAAGGTGATTAATTGTCCAGAAAATCCCAAGCAGCTGTGTGTTGATCCGAGTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022082.8 ENSMUST00000223120.2 |
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| 3UTR-3UTR CAA 90 bp | TCAAAGTTTGGATGGAAGAAACTGTTTAGGACAATGTTTCAGAAACAACGTCTTGCGGGTTGTAGGAGGTaGAGGCTGAGAACACTGGCT | + |
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Preference number: 3 (lower is better) Translates to: SKFGWKKLFRTMFQKQRLAGCRR*RLRTLA Trigger: AGCCAGTGTTCTCAGCCTCAACCTCCTACAACCCGC...AAGACGTTGTTTCTGAAACATTGTCCTAAACAGTTTCTTCCATCCAAACTTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022082.8 ENSMUST00000223120.2 |
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| 3UTR-3UTR CAA 90 bp | TATAGATACATCTTTAATAGTAATGAATCCTCCTCACTGGAGACCAGAGAAGTGTTAGAGCAACTGGATTaGGAAAACCTGGGCTTAGAG | + |
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Preference number: 3 (lower is better) Translates to: YRYIFNSNESSSLETREVLEQLD*ENLGLE Trigger: CTCTAAGCCCAGGTTTTCCAAATCCAGTTGCTCTAA...CACTTCTCTGGTCTCCAGTGAGGAGGATTCATTACTATTAAAGATGTATCTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022082.8 ENSMUST00000223120.2 |
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| CDS-3UTR TCA 90 bp | CGCCTTGTTGAAAAATCCCAGTCACCAGGAAATACTGACATCCTCTGCGATGCACTGTTCTCGCTCCGGTaGGCTGTTGTAAATAATCTT | + |
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Preference number: 4 (lower is better) Translates to: RLVEKSQSPGNTDILCDALFSLR*AVVNNL Trigger: AAGATTATTTACAACAGCTCACCGGAGCGAGAACAG...TGCATCGCAGAGGATGTCAGTATTTCCTGGTGACTGGGATTTTTCAACAAGGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022082.8 ENSMUST00000220523.2 ENSMUST00000223120.2 |
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| CDS-3UTR CCA 90 bp | AATAAAGGCCGCCTTGTTGAAAAATCCCAGTCACCAGGAAATACTGACATCCTCACAGCTGTGTCAGCATaGACTCTGCCTATGAAGACC | + |
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Preference number: 4 (lower is better) Translates to: NKGRLVEKSQSPGNTDILTAVSA*TLPMKT Trigger: GGTCTTCATAGGCAGAGTCCATGCTGACACAGCTGT...GAGGATGTCAGTATTTCCTGGTGACTGGGATTTTTCAACAAGGCGGCCTTTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220523.2 |
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| CDS-3UTR GCA 90 bp | GTTGAAAAATCCCAGTCACCAGGAAATACTGACATCCTCTGCGATGCACATCAAAGCTCCCCAGTCTGTTaGATGGAGATTAGATCACTG | + |
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Preference number: 4 (lower is better) Translates to: VEKSQSPGNTDILCDAHQSSPVC*MEIRSL Trigger: CAGTGATCTAATCTCCATGCAACAGACTGGGGAGCT...TTGATGTGCATCGCAGAGGATGTCAGTATTTCCTGGTGACTGGGATTTTTCAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022082.8 ENSMUST00000223120.2 |
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| CDS-3UTR TCA 90 bp | GAGACCAGAGAAGTGATCTACAGATCCATGAGAATTAAACAGCATAGCAAGACATGCAGTCTTTACCTATaGAGACCCGAGGAACTGTTC | + |
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Preference number: 4 (lower is better) Translates to: ETREVIYRSMRIKQHSKTCSLYL*RPEELF Trigger: GAACAGTTCCTCGGGTCTTCATAGGTAAAGACTGCA...TGTCTTGCTATGCTGTTTAATTCTCATGGATCTGTAGATCACTTCTCTGGTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022082.8 ENSMUST00000223120.2 |
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| CDS-3UTR TCA 90 bp | GAGACCAGAGAAGTGATCTACAGATCCATGAGAATTAAACAGCATAGCAAGACACTGTTCTCGCTCCGGTaGGCTGTTGTAAATAATCTT | + |
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Preference number: 4 (lower is better) Translates to: ETREVIYRSMRIKQHSKTLFSLR*AVVNNL Trigger: AAGATTATTTACAACAGCTCACCGGAGCGAGAACAG...TGTCTTGCTATGCTGTTTAATTCTCATGGATCTGTAGATCACTTCTCTGGTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022082.8 ENSMUST00000223120.2 |
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| CDS-3UTR TCA 90 bp | TGTCAAAGTTTGGATGGAAGAAACTGTTTAGGACAATGTTTCAGAAACAACGTCTGCAGTCTTTACCTATaGAGACCCGAGGAACTGTTC | + |
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Preference number: 4 (lower is better) Translates to: CQSLDGRNCLGQCFRNNVCSLYL*RPEELF Trigger: GAACAGTTCCTCGGGTCTTCATAGGTAAAGACTGCA...GACGTTGTTTCTGAAACATTGTCCTAAACAGTTTCTTCCATCCAAACTTTGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022082.8 ENSMUST00000223120.2 |
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| CDS-3UTR TCA 90 bp | TGTCAAAGTTTGGATGGAAGAAACTGTTTAGGACAATGTTTCAGAAACAACGTCCTGTTCTCGCTCCGGTaGGCTGTTGTAAATAATCTT | + |
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Preference number: 4 (lower is better) Translates to: CQSLDGRNCLGQCFRNNVLFSLR*AVVNNL Trigger: AAGATTATTTACAACAGCTCACCGGAGCGAGAACAG...GACGTTGTTTCTGAAACATTGTCCTAAACAGTTTCTTCCATCCAAACTTTGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022082.8 ENSMUST00000223120.2 |
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| CDS-3UTR GCA 90 bp | TCAAAGTTTGGATGGAAGAAACTGTTTAGGACAATGTTTCAGAAACAACGTCTTAGCTCCCCAGTCTGTTaGATGGAGATTAGATCACTG | + |
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Preference number: 4 (lower is better) Translates to: SKFGWKKLFRTMFQKQRLSSPVC*MEIRSL Trigger: CAGTGATCTAATCTCCATGCAACAGACTGGGGAGCT...AAGACGTTGTTTCTGAAACATTGTCCTAAACAGTTTCTTCCATCCAAACTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022082.8 ENSMUST00000223120.2 |
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| CDS-3UTR CAA 90 bp | GGACAATTAATCACCTTTACAGAGGGAGCTGCATGCACCATCTGCTCTGCCGCCTTGTTTGAAAGGCAGTaGACTGAGGATTTCTTGGGT | + |
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Preference number: 5 (lower is better) Translates to: GQLITFTEGAACTICSAALFERQ*TEDFLG Trigger: ACCCAAGAAATCCTCAGTCAACTGCCTTTCAAACAA...GGCGGCAGAGCAGATGGTGCATGCAGCTCCCTCTGTAAAGGTGATTAATTGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022082.8 ENSMUST00000223120.2 |
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| CDS-3UTR CAA 90 bp | AAAGGCCGCCTTGTTGAAAAATCCCAGTCACCAGGAAATACTGACATCCTCTGCTTGTTTGAAAGGCAGTaGACTGAGGATTTCTTGGGT | + |
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Preference number: 5 (lower is better) Translates to: KGRLVEKSQSPGNTDILCLFERQ*TEDFLG Trigger: ACCCAAGAAATCCTCAGTCAACTGCCTTTCAAACAA...GCAGAGGATGTCAGTATTTCCTGGTGACTGGGATTTTTCAACAAGGCGGCCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022082.8 ENSMUST00000220523.2 ENSMUST00000223120.2 |
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| CDS-3UTR CAA 90 bp | GTTGAAAAATCCCAGTCACCAGGAAATACTGACATCCTCTGCGATGCACATCAATTGTTTGAAAGGCAGTaGACTGAGGATTTCTTGGGT | + |
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Preference number: 5 (lower is better) Translates to: VEKSQSPGNTDILCDAHQLFERQ*TEDFLG Trigger: ACCCAAGAAATCCTCAGTCAACTGCCTTTCAAACAA...TTGATGTGCATCGCAGAGGATGTCAGTATTTCCTGGTGACTGGGATTTTTCAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022082.8 ENSMUST00000220523.2 ENSMUST00000223120.2 |
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| CDS-3UTR CAA 90 bp | AATAAAGGCCGCCTTGTTGAAAAATCCCAGTCACCAGGAAATACTGACATCCTCAAACTCCAGAAGACCTaGTTTGAAAGGCAGTTGACT | + |
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Preference number: 5 (lower is better) Translates to: NKGRLVEKSQSPGNTDILKLQKT*FERQLT Trigger: AGTCAACTGCCTTTCAAACAAGGTCTTCTGGAGTTT...GAGGATGTCAGTATTTCCTGGTGACTGGGATTTTTCAACAAGGCGGCCTTTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022082.8 ENSMUST00000220523.2 ENSMUST00000223120.2 |
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| CDS-3UTR CAA 90 bp | TCAAAGTTTGGATGGAAGAAACTGTTTAGGACAATGTTTCAGAAACAACGTCTTAAACTCCAGAAGACCTaGTTTGAAAGGCAGTTGACT | + |
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Preference number: 5 (lower is better) Translates to: SKFGWKKLFRTMFQKQRLKLQKT*FERQLT Trigger: AGTCAACTGCCTTTCAAACAAGGTCTTCTGGAGTTT...AAGACGTTGTTTCTGAAACATTGTCCTAAACAGTTTCTTCCATCCAAACTTTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022082.8 ENSMUST00000223120.2 |
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| CDS CAA 72 bp | GTCCACAAACTCCAGAAGACCTTGTTTGAAAGGCAGTaGACTGAGGATTTCTTGGGTCTTTCTGCAGTAGGG | + |
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Preference number: 6 (lower is better) Translates to: VHKLQKTLFERQ*TEDFLGLSAVG Trigger: CCCTACTGCAGAAAGACCCAAGAAATCCTCAGTCAACTGCCTTTCAAACAAGGTCTTCTGGAGTTTGTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022082.8 ENSMUST00000220523.2 ENSMUST00000223120.2 |
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