Pregenerated sensors for GLRP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062310Ensembl transcript IDs: ENSMUST00000067625.9
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTCTCCTCTCCCTAGAATGTTACACAGACCCAAGATGGAGAAAGTaGAAGGTGGCCTCTCGCCTTCATATCAAGGAGGCATACACTGAC | + |
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Preference number: 1 (lower is better) Translates to: PLLSLECYTDPRWRK*KVASRLHIKEAYTD Trigger: GTCAGTGTATGCCTCCTTGATATGAAGGCGAGAGGCCACCTTCCACTTTCTCCATCTTGGGTCTGTGTAACATTCTAGGGAGAGGAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| 3UTR GCA 90 bp | TGCTTCAGGGCATCCAAGGCAGTGTGGTGTGCATTAGCGATTGGTTaGGTTTTGGAGTTGGAGAAAGAAAACACGAACCGTAGCATTTGG | + |
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Preference number: 1 (lower is better) Translates to: CFRASKAVWCALAIG*VLELEKENTNRSIW Trigger: CCAAATGCTACGGTTCGTGTTTTCTTTCTCCAACTCCAAAACGCAACCAATCGCTAATGCACACCACACTGCCTTGGATGCCCTGAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| 3UTR CCA 90 bp | ACAAGGTACAGGCACTCCCGGGTCACCCCATCTCTGGATTTACATTaGTTATGTCCAGGTTTTAATGGAACACAGCTTCTTCTTGGTTGC | + |
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Preference number: 1 (lower is better) Translates to: TRYRHSRVTPSLDLH*LCPGFNGTQLLLGC Trigger: GCAACCAAGAAGAAGCTGTGTTCCATTAAAACCTGGACATAACCAATGTAAATCCAGAGATGGGGTGACCCGGGAGTGCCTGTACCTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| 3UTR CCA 90 bp | GTCTTCGAAACTCATAATGATGAGCCTGGATCTTTGGATAGTCACTaGATGATAACAGTCAATATGCCACCAAGAAGCAGCTTTTCTGTG | + |
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Preference number: 1 (lower is better) Translates to: VFETHNDEPGSLDSH*MITVNMPPRSSFSV Trigger: CACAGAAAAGCTGCTTCTTGGTGGCATATTGACTGTTATCATCCAGTGACTATCCAAAGATCCAGGCTCATCATTATGAGTTTCGAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| 3UTR-3UTR TCA 90 bp | AGGCACTCCCGGGTCACCCCATCTCTGGATTTACATTGGTTATGTCCAGGTTTTTGGTTGCTGCAGACATaGACTTCAACCTTCCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: RHSRVTPSLDLHWLCPGFWLLQT*TSTFPL Trigger: GAGAGGGAAGGTTGAAGTTCATGTCTGCAGCAACCA...AAAACCTGGACATAACCAATGTAAATCCAGAGATGGGGTGACCCGGGAGTGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| 3UTR-3UTR CCA 90 bp | ACTTCCCCGTCCTACCACAGACAGAAGATCCTAAGTAGGCATGACTCTCCATGTTACACAGACCCAAGATaGAGAAAGTGGAAGGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: TSPSYHRQKILSRHDSPCYTDPR*RKWKVA Trigger: GGCCACCTTCCACTTTCTCCATCTTGGGTCTGTGTA...ACATGGAGAGTCATGCCTACTTAGGATCTTCTGTCTGTGGTAGGACGGGGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| 3UTR-3UTR TCA 90 bp | CTTCAGGGCATCCAAGGCAGTGTGGTGTGCATTAGCGATTGGTTGCGTTTTGGACCAAAGATTAAATTCTaGCACTTGCTGCCAATGACC | + |
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Preference number: 2 (lower is better) Translates to: LQGIQGSVVCISDWLRFGPKIKF*HLLPMT Trigger: GGTCATTGGCAGCAAGTGTCAGAATTTAATCTTTGG...TCCAAAACGCAACCAATCGCTAATGCACACCACACTGCCTTGGATGCCCTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| 3UTR-3UTR GCA 90 bp | ACTTCCCCGTCCTACCACAGACAGAAGATCCTAAGTAGGCATGACTCTCCATGTGCATTAGCGATTGGTTaGGTTTTGGAGTTGGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: TSPSYHRQKILSRHDSPCALAIG*VLELEK Trigger: TTTCTCCAACTCCAAAACGCAACCAATCGCTAATGC...ACATGGAGAGTCATGCCTACTTAGGATCTTCTGTCTGTGGTAGGACGGGGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| 3UTR-3UTR CCA 90 bp | CTTCAGGGCATCCAAGGCAGTGTGGTGTGCATTAGCGATTGGTTGCGTTTTGGATCTTTGGATAGTCACTaGATGATAACAGTCAATATG | + |
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Preference number: 2 (lower is better) Translates to: LQGIQGSVVCISDWLRFGSLDSH*MITVNM Trigger: CATATTGACTGTTATCATCCAGTGACTATCCAAAGA...TCCAAAACGCAACCAATCGCTAATGCACACCACACTGCCTTGGATGCCCTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| 3UTR-3UTR CCA 90 bp | GGCAGTGTGGTGTGCATTAGCGATTGGTTGCGTTTTGGAGTTGGAGAAAGAAAATTTTCTACCTGTTCATaGAATATGCAGCTAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: GSVVCISDWLRFGVGERKFSTCS*NMQLGR Trigger: TCTTCCTAGCTGCATATTCCATGAACAGGTAGAAAA...TTTTCTTTCTCCAACTCCAAAACGCAACCAATCGCTAATGCACACCACACTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| 3UTR-3UTR CAA 90 bp | GCAGACATGAACTTCAACCTTCCCTCTCCTCTCCCTAGAATGTTACACAGACCCACTGACCCTCTCATCTaGCCAGACCTGACATCCATA | + |
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Preference number: 3 (lower is better) Translates to: ADMNFNLPSPLPRMLHRPTDPLI*PDLTSI Trigger: TATGGATGTCAGGTCTGGCAAGATGAGAGGGTCAGT...GGGTCTGTGTAACATTCTAGGGAGAGGAGAGGGAAGGTTGAAGTTCATGTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| 3UTR CCA 72 bp | TCCCTAGAATGTTACACAGACCCAAGATGGAGAAAGTaGAAGGTGGCCTCTCGCCTTCATATCAAGGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: SLECYTDPRWRK*KVASRLHIKEA Trigger: TGCCTCCTTGATATGAAGGCGAGAGGCCACCTTCCACTTTCTCCATCTTGGGTCTGTGTAACATTCTAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| 3UTR-3UTR CAA 90 bp | AGGCACTCCCGGGTCACCCCATCTCTGGATTTACATTGGTTATGTCCAGGTTTTGAACACAGCTTCTTCTaGGTTGCTGCAGACATGAAC | + |
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Preference number: 3 (lower is better) Translates to: RHSRVTPSLDLHWLCPGFEHSFF*VAADMN Trigger: GTTCATGTCTGCAGCAACCAAGAAGAAGCTGTGTTC...AAAACCTGGACATAACCAATGTAAATCCAGAGATGGGGTGACCCGGGAGTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| 3UTR GCA 72 bp | CCAGGTTTTAATGGAACACAGCTTCTTCTTGGTTGCTaGAGACATGAACTTCAACCTTCCCTCTCCTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: PGFNGTQLLLGC*RHELQPSLSSP Trigger: GGGAGAGGAGAGGGAAGGTTGAAGTTCATGTCTGCAGCAACCAAGAAGAAGCTGTGTTCCATTAAAACCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| 3UTR GCA 72 bp | GCATCCAAGGCAGTGTGGTGTGCATTAGCGATTGGTTaGGTTTTGGAGTTGGAGAAAGAAAACACGAACCGT | + |
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Preference number: 3 (lower is better) Translates to: ASKAVWCALAIG*VLELEKENTNR Trigger: ACGGTTCGTGTTTTCTTTCTCCAACTCCAAAACGCAACCAATCGCTAATGCACACCACACTGCCTTGGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| 3UTR CCA 72 bp | CAGGGCATCCAAGGCAGTGTGGTGTGCATTAGCGATTaGTTGCGTTTTGGAGTTGGAGAAAGAAAACACGAA | + |
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Preference number: 3 (lower is better) Translates to: QGIQGSVVCISD*LRFGVGERKHE Trigger: TTCGTGTTTTCTTTCTCCAACTCCAAAACGCAACCAATCGCTAATGCACACCACACTGCCTTGGATGCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| 3UTR CCA 72 bp | AGGCACTCCCGGGTCACCCCATCTCTGGATTTACATTaGTTATGTCCAGGTTTTAATGGAACACAGCTTCTT | + |
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Preference number: 3 (lower is better) Translates to: RHSRVTPSLDLH*LCPGFNGTQLL Trigger: AAGAAGCTGTGTTCCATTAAAACCTGGACATAACCAATGTAAATCCAGAGATGGGGTGACCCGGGAGTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| 3UTR-3UTR CAA 90 bp | GTCTTTCTATATGTGGCTATGGTGTGCGATCAGCTAAACAAAAGGGTCTTTTTGCATCCAGTTGGTAGCTaGGATGATGCTCACTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: VFLYVAMVCDQLNKRVFLHPVGS*DDAHSG Trigger: TCCAGAGTGAGCATCATCCAAGCTACCAACTGGATG...CAAAAAGACCCTTTTGTTTAGCTGATCGCACACCATAGCCACATATAGAAAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| 3UTR TCA 72 bp | AAATGCCAAAGATTAAATTCTGACACTTGCTGCCAATaGCCAGTCTTTCTATATGTGGCTATGGTGTGCGAT | + |
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Preference number: 3 (lower is better) Translates to: KCQRLNSDTCCQ*PVFLYVAMVCD Trigger: ATCGCACACCATAGCCACATATAGAAAGACTGGTCATTGGCAGCAAGTGTCAGAATTTAATCTTTGGCATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| 3UTR TCA 72 bp | CCCCAAACACAACAATTTGGAAACCACTACCACATGTaGGCTGCTGTGAGTATTATACAACATAGTTGGTAT | + |
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Preference number: 3 (lower is better) Translates to: PQTQQFGNHYHM*AAVSIIQHSWY Trigger: ATACCAACTATGTTGTATAATACTCACAGCAGCTCACATGTGGTAGTGGTTTCCAAATTGTTGTGTTTGGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| CDS-3UTR CCA 90 bp | CTGACACTTGCTGCCAATGACCAGTCTTTCTATATGTGGCTATGGTGTGCGATCTGCTGCTGGTGCTGCTaGTGCTGCTCCTTGGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: LTLAANDQSFYMWLWCAICCWCC*CCSLAP Trigger: CGGGGCCAAGGAGCAGCACCAGCAGCACCAGCAGCA...GATCGCACACCATAGCCACATATAGAAAGACTGGTCATTGGCAGCAAGTGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| CDS-3UTR GCA 90 bp | ACAGTCAATATGCCACCAAGAAGCAGCTTTTCTGTGATGAGCACGCAATTCTTTTGCTGGTGCTGCTGGTaGTGCTCCTTGGCCCCGTCC | + |
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Preference number: 4 (lower is better) Translates to: TVNMPPRSSFSVMSTQFFCWCCW*CSLAPS Trigger: GGACGGGGCCAAGGAGCAGCACCAGCAGCACCAGCA...AAAGAATTGCGTGCTCATCACAGAAAAGCTGCTTCTTGGTGGCATATTGACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| 3UTR CAA 72 bp | GGCATCCAAGGCAGTGTGGTGTGCATTAGCGATTGGTaGCGTTTTGGAGTTGGAGAAAGAAAACACGAACCG | + |
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Preference number: 4 (lower is better) Translates to: GIQGSVVCISDW*RFGVGERKHEP Trigger: CGGTTCGTGTTTTCTTTCTCCAACTCCAAAACGCAACCAATCGCTAATGCACACCACACTGCCTTGGATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| CDS-3UTR GCA 90 bp | AGTCTTTCTATATGTGGCTATGGTGTGCGATCAGCTAAACAAAAGGGTCTTTTTTGCTGGTGCTGGTCCTaGTGGTGCTGCTGGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SLSICGYGVRSAKQKGLFCWCWS*WCCWCC Trigger: GCAGCACCAGCAGCACCAGCAGGACCAGCACCAGCA...AAAAAGACCCTTTTGTTTAGCTGATCGCACACCATAGCCACATATAGAAAGACT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| CDS-3UTR GCA 90 bp | AGTCTTTCTATATGTGGCTATGGTGTGCGATCAGCTAAACAAAAGGGTCTTTTTTGGTGCTGCTGGTGCTaGTGGTGCTGTTGGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SLSICGYGVRSAKQKGLFWCCWC*WCCWCC Trigger: GCAGCACCAACAGCACCAGCAGCACCAGCAGCACCA...AAAAAGACCCTTTTGTTTAGCTGATCGCACACCATAGCCACATATAGAAAGACT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| 3UTR CAA 72 bp | AAGGCAGTGTGGTGTGCATTAGCGATTGGTTGCGTTTaGGAGTTGGAGAAAGAAAACACGAACCGTAGCATT | + |
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Preference number: 4 (lower is better) Translates to: KAVWCALAIGCV*ELEKENTNRSI Trigger: AATGCTACGGTTCGTGTTTTCTTTCTCCAACTCCAAAACGCAACCAATCGCTAATGCACACCACACTGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| 3UTR CAA 72 bp | GGTTATGTCCAGGTTTTAATGGAACACAGCTTCTTCTaGGTTGCTGCAGACATGAACTTCAACCTTCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: GYVQVLMEHSFF*VAADMNFNLPS Trigger: AGAGGGAAGGTTGAAGTTCATGTCTGCAGCAACCAAGAAGAAGCTGTGTTCCATTAAAACCTGGACATAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| CDS-3UTR TCA 90 bp | GTCTTTCTATATGTGGCTATGGTGTGCGATCAGCTAAACAAAAGGGTCTTTTTGGGGATTTTGTCCATTTaGTTTTGCTGCTGCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: VFLYVAMVCDQLNKRVFLGILSI*FCCCCW Trigger: CCAGCAGCAGCAGCAAAATCAAATGGACAAAATCCC...CAAAAAGACCCTTTTGTTTAGCTGATCGCACACCATAGCCACATATAGAAAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| 3UTR CAA 72 bp | TGTGTCTTCGAAACTCATAATGATGAGCCTGGATCTTaGGATAGTCACTGGATGATAACAGTCAATATGCCA | + |
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Preference number: 4 (lower is better) Translates to: CVFETHNDEPGS*DSHWMITVNMP Trigger: TGGCATATTGACTGTTATCATCCAGTGACTATCCAAAGATCCAGGCTCATCATTATGAGTTTCGAAGACACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| CDS-3UTR CAA 90 bp | TTAGCGATTGGTTGCGTTTTGGAGTTGGAGAAAGAAAACACGAACCGTAGCATTTGCTGGTGCTGCTCCTaGGCCCCGTCCAGCCTAGAG | + |
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Preference number: 5 (lower is better) Translates to: LAIGCVLELEKENTNRSICWCCS*APSSLE Trigger: CTCTAGGCTGGACGGGGCCAAGGAGCAGCACCAGCA...AATGCTACGGTTCGTGTTTTCTTTCTCCAACTCCAAAACGCAACCAATCGCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| CDS-3UTR CAA 90 bp | ACTTCCCCGTCCTACCACAGACAGAAGATCCTAAGTAGGCATGACTCTCCATGTTTTGTCCATTTGATTTaGCTGCTGCTGCTGGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: TSPSYHRQKILSRHDSPCFVHLI*LLLLVL Trigger: CAGCACCAGCAGCAGCAGCAAAATCAAATGGACAAA...ACATGGAGAGTCATGCCTACTTAGGATCTTCTGTCTGTGGTAGGACGGGGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| CDS CCA 72 bp | TGCTGGTGCTGCTGGTGCTGGTCCTGCTGGTGCTGCTaGTGCTGCTGGTGCTGCTCCTTGGCCCCGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: CWCCWCWSCWCC*CCWCCSLAPSS Trigger: GCTGGACGGGGCCAAGGAGCAGCACCAGCAGCACCAGCAGCACCAGCAGGACCAGCACCAGCAGCACCAGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| CDS GCA 72 bp | TGGTGCTGCTGGTGCTGGTCCTGCTGGTGCTGCTGGTaGTGCTGGTGCTGCTCCTTGGCCCCGTCCAGCCTA | + |
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Preference number: 6 (lower is better) Translates to: WCCWCWSCWCCW*CWCCSLAPSSL Trigger: TAGGCTGGACGGGGCCAAGGAGCAGCACCAGCAGCACCAGCAGCACCAGCAGGACCAGCACCAGCAGCACCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| CDS CAA 72 bp | TTTGTCCATTTGATTTTGCTGCTGCTGCTGGTGCTGTaGGTGCTGCTGGTGCTGGTGCTGCTGGTGCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: FVHLILLLLLVL*VLLVLVLLVLV Trigger: CACCAGCACCAGCAGCACCAGCACCAGCAGCACCAACAGCACCAGCAGCAGCAGCAAAATCAAATGGACAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| CDS CAA 90 bp | TGTTTCTGGGATTTCAAATATCATCATGCCTGGGATTTTGTCCATTaGATTTTGCTGCTGCTGCTGGTGCTGTTGGTGCTGCTGGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: CFWDFKYHHAWDFVH*ILLLLLVLLVLLVL Trigger: CAGCACCAGCAGCACCAACAGCACCAGCAGCAGCAGCAAAATCAAATGGACAAAATCCCAGGCATGATGATATTTGAAATCCCAGAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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| CDS CAA 72 bp | AAATATCATCATGCCTGGGATTTTGTCCATTTGATTTaGCTGCTGCTGCTGGTGCTGTTGGTGCTGCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: KYHHAWDFVHLI*LLLLVLLVLLV Trigger: CACCAGCAGCACCAACAGCACCAGCAGCAGCAGCAAAATCAAATGGACAAAATCCCAGGCATGATGATATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067625.9 |
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