Pregenerated sensors for GLRB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028020Ensembl transcript IDs: ENSMUST00000029654.15, ENSMUST00000107743.8, ENSMUST00000132330.2, ENSMUST00000135043.8, ENSMUST00000194085.6
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACATAAGACACTTTAGGAAGCTCGGCTGCGAGGGTGGTGCACTCTaGGGCCAAACTGAGCACGGAGAAGATGCCCAGAGGTACTCTGGC | + |
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Preference number: 1 (lower is better) Translates to: HIRHFRKLGCEGGAL*GQTEHGEDAQRYSG Trigger: GCCAGAGTACCTCTGGGCATCTTCTCCGTGCTCAGTTTGGCCTCAGAGTGCACCACCCTCGCAGCCGAGCTTCCTAAAGTGTCTTATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR CCA 90 bp | TGGGATGACAGGCTTGGCAGGCGGAGGCTTCTTGTTCTTTGCCTGTaGTTTCCCAAGTCCATTGTTGACTTCGATGGGTTTCCCATAGCA | + |
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Preference number: 1 (lower is better) Translates to: WDDRLGRRRLLVLCL*FPKSIVDFDGFPIA Trigger: TGCTATGGGAAACCCATCGAAGTCAACAATGGACTTGGGAAACCACAGGCAAAGAACAAGAAGCCTCCGCCTGCCAAGCCTGTCATCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR GCA 90 bp | GCCGTTTACAGTATTCTTCTTAGCTGCGTTTCCACCTTTCCCATCTaGTTGCTCAGCCTTAGCTATTCGGGCCTTCTCGGCTTCAACCCT | + |
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Preference number: 1 (lower is better) Translates to: AVYSILLSCVSTFPI*LLSLSYSGLLGFNP Trigger: AGGGTTGAAGCCGAGAAGGCCCGAATAGCTAAGGCTGAGCAAGCAGATGGGAAAGGTGGAAACGCAGCTAAGAAGAATACTGTAAACGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR GCA 90 bp | GATATGAACAGGGGTCCCCGTGCCGTTTACAGTATTCTTCTTAGCTaGGTTTCCACCTTTCCCATCTGCTTGCTCAGCCTTAGCTATTCG | + |
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Preference number: 1 (lower is better) Translates to: DMNRGPRAVYSILLS*VSTFPICLLSLSYS Trigger: CGAATAGCTAAGGCTGAGCAAGCAGATGGGAAAGGTGGAAACGCAGCTAAGAAGAATACTGTAAACGGCACGGGGACCCCTGTTCATATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR GCA 90 bp | TTTACAGTATTCTTCTTAGCTGCGTTTCCACCTTTCCCATCTGCTTaGTCAGCCTTAGCTATTCGGGCCTTCTCGGCTTCAACCCTTTTG | + |
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Preference number: 1 (lower is better) Translates to: FTVFFLAAFPPFPSA*SALAIRAFSASTLL Trigger: CAAAAGGGTTGAAGCCGAGAAGGCCCGAATAGCTAAGGCTGAGCAAGCAGATGGGAAAGGTGGAAACGCAGCTAAGAAGAATACTGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR TCA 90 bp | GCGGAGGCTTCTTGTTCTTTGCCTGTGGTTTCCCAAGTCCATTGTTaGCTTCGATGGGTTTCCCATAGCAGTCATAATTGGATAATTCAA | + |
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Preference number: 1 (lower is better) Translates to: AEASCSLPVVSQVHC*LRWVSHSSHNWIIQ Trigger: TTGAATTATCCAATTATGACTGCTATGGGAAACCCATCGAAGTCAACAATGGACTTGGGAAACCACAGGCAAAGAACAAGAAGCCTCCGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR GCA 90 bp | ATCTTAAATCATCGGTTGTATATCCAAAGCTCTCAAGTTGCATTTTaGAGCGTTGTGTGTCCATGGGAAACAGAGTTAAGTCTAGAGGAC | + |
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Preference number: 1 (lower is better) Translates to: ILNHRLYIQSSQVAF*SVVCPWETELSLED Trigger: GTCCTCTAGACTTAACTCTGTTTCCCATGGACACACAACGCTGCAAAATGCAACTTGAGAGCTTTGGATATACAACCGATGATTTAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR GCA 90 bp | CAGATGAATCTTAAATCATCGGTTGTATATCCAAAGCTCTCAAGTTaGATTTTGCAGCGTTGTGTGTCCATGGGAAACAGAGTTAAGTCT | + |
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Preference number: 1 (lower is better) Translates to: QMNLKSSVVYPKLSS*ILQRCVSMGNRVKS Trigger: AGACTTAACTCTGTTTCCCATGGACACACAACGCTGCAAAATGCAACTTGAGAGCTTTGGATATACAACCGATGATTTAAGATTCATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR CAA 90 bp | TCAGCCTTAGCTATTCGGGCCTTCTCGGCTTCAACCCTTTTGGGATaGTTCAGCATCACCTGGACCACAGCGTACTCCACGAGGGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: SALAIRAFSASTLLG*FSITWTTAYSTREA Trigger: TGCCTCCCTCGTGGAGTACGCTGTGGTCCAGGTGATGCTGAACAATCCCAAAAGGGTTGAAGCCGAGAAGGCCCGAATAGCTAAGGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR CAA 90 bp | GCTTGCTCAGCCTTAGCTATTCGGGCCTTCTCGGCTTCAACCCTTTaGGGATTGTTCAGCATCACCTGGACCACAGCGTACTCCACGAGG | + |
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Preference number: 2 (lower is better) Translates to: ACSALAIRAFSASTL*GLFSITWTTAYSTR Trigger: CCTCGTGGAGTACGCTGTGGTCCAGGTGATGCTGAACAATCCCAAAAGGGTTGAAGCCGAGAAGGCCCGAATAGCTAAGGCTGAGCAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAATGCCTTTGAAGTTTGGTCTGATCCTGGGATCATAACTGACCAGCAGCCTGCCAAGGAGGTCGTGTaGTCATTTGCTGGCAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: RNAFEVWSDPGIITDQQPAKEVV*SFAGKG Trigger: CCCTTTGCCAGCAAATGACCACACGACCTCCTTGGC...AGGCTGCTGGTCAGTTATGATCCCAGGATCAGACCAAACTTCAAAGGCATTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132330.2 |
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| 3UTR CAA 90 bp | GTTTACAGTATTCTTCTTAGCTGCGTTTCCACCTTTCCCATCTGCTaGCTCAGCCTTAGCTATTCGGGCCTTCTCGGCTTCAACCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: VYSILLSCVSTFPIC*LSLSYSGLLGFNPF Trigger: AAAAGGGTTGAAGCCGAGAAGGCCCGAATAGCTAAGGCTGAGCAAGCAGATGGGAAAGGTGGAAACGCAGCTAAGAAGAATACTGTAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAGGTTGGTGCATATACGCCCATCATGTAGAACCCAACCTGTCTCCTCAGGGAATGCCTTTGAAGTTTaGTCTGATCCTGGGATCATA | + |
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Preference number: 2 (lower is better) Translates to: ARLVHIRPSCRTQPVSSGNAFEV*SDPGII Trigger: TATGATCCCAGGATCAGACCAAACTTCAAAGGCATT...CCCTGAGGAGACAGGTTGGGTTCTACATGATGGGCGTATATGCACCAACCTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCGATGGGTTTCCCATAGCAGTCATAATTGGATAATTCAAAATCTCTTGGTAGCTCGGCTGCGAGGGTaGTGCACTCTGAGGCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: LRWVSHSSHNWIIQNLLVARLRG*CTLRPN Trigger: GTTTGGCCTCAGAGTGCACCACCCTCGCAGCCGAGC...TACCAAGAGATTTTGAATTATCCAATTATGACTGCTATGGGAAACCCATCGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTGGATTACTGGAAGTATTTGTAGTTACAGAGTTACAGTAGCTGAAGAGCACCAACCTGCAAAGTGCTaGTATGAACAGGGGTCCCCG | + |
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Preference number: 2 (lower is better) Translates to: IWITGSICSYRVTVAEEHQPAKC*YEQGSP Trigger: CGGGGACCCCTGTTCATATCAGCACTTTGCAGGTTG...GTGCTCTTCAGCTACTGTAACTCTGTAACTACAAATACTTCCAGTAATCCAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR-3UTR GCA 90 bp | TGCATACATGGACCAGTGAACATGACAGGGGTCAGCGTGCACATTATGTTTTCACCAAAGCTCTCAAGTTaGATTTTGCAGCGTTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: CIHGPVNMTGVSVHIMFSPKLSS*ILQRCV Trigger: CACACAACGCTGCAAAATGCAACTTGAGAGCTTTGG...TGAAAACATAATGTGCACGCTGACCCCTGTCATGTTCACTGGTCCATGTATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR-3UTR TCA 90 bp | GTAAGATACTGCATACATGGACCAGTGAACATGACAGGGGTCAGCGTGCACATTTTGCATTGGTCACAATaGAATGGTGCTGTATTTCAT | + |
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Preference number: 2 (lower is better) Translates to: VRYCIHGPVNMTGVSVHILHWSQ*NGAVFH Trigger: ATGAAATACAGCACCATTTCATTGTGACCAATGCAA...AATGTGCACGCTGACCCCTGTCATGTTCACTGGTCCATGTATGCAGTATCTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029654.15 ENSMUST00000135043.8 |
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| 3UTR-3UTR TCA 90 bp | AGGAATGCCTTTGAAGTTTGGTCTGATCCTGGGATCATAACTGACCAGCAGCCTTTGCATTGGTCACAATaGAATGGTGCTGTATTTCAT | + |
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Preference number: 2 (lower is better) Translates to: RNAFEVWSDPGIITDQQPLHWSQ*NGAVFH Trigger: ATGAAATACAGCACCATTTCATTGTGACCAATGCAA...AGGCTGCTGGTCAGTTATGATCCCAGGATCAGACCAAACTTCAAAGGCATTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR-3UTR GCA 90 bp | TATGAGTTGGCTGTACAAACTATCAACAAGAACAAAAGCACTCCAAATAACGCAGAACAGGGGTCCCCGTaGCGTTTACAGTATTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: YELAVQTINKNKSTPNNAEQGSP*RLQYSS Trigger: AGAAGAATACTGTAAACGGCACGGGGACCCCTGTTC...TGCGTTATTTGGAGTGCTTTTGTTCTTGTTGATAGTTTGTACAGCCAACTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCCATACCAACCAATGAAAGGCATGAAAATAGACTTTGATTTAAGGTGGATTTTGTTCAGCATCACCTaGACCACAGCGTACTCCACG | + |
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Preference number: 2 (lower is better) Translates to: SPYQPMKGMKIDFDLRWILFSIT*TTAYST Trigger: CGTGGAGTACGCTGTGGTCCAGGTGATGCTGAACAA...AATCCACCTTAAATCAAAGTCTATTTTCATGCCTTTCATTGGTTGGTATGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTGGAGTCTAACAGTAATCTGGACTCACATGTCACCACACTATTTAGGTTTGCAGATAGAAATAAGATaGAGTCAGCCAGCCCCAATA | + |
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Preference number: 2 (lower is better) Translates to: FWSLTVIWTHMSPHYLGLQIEIR*SQPAPI Trigger: TATTGGGGCTGGCTGACTTCATCTTATTTCTATCTG...CAAACCTAAATAGTGTGGTGACATGTGAGTCCAGATTACTGTTAGACTCCAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029654.15 ENSMUST00000135043.8 |
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| 3UTR-3UTR GCA 90 bp | TGCATACATGGACCAGTGAACATGACAGGGGTCAGCGTGCACATTATGTTTTCAATATTGCTAGGAAAATaGAAAGTTTCCACAGATCAG | + |
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Preference number: 2 (lower is better) Translates to: CIHGPVNMTGVSVHIMFSILLGK*KVSTDQ Trigger: CTGATCTGTGGAAACTTTGCATTTTCCTAGCAATAT...TGAAAACATAATGTGCACGCTGACCCCTGTCATGTTCACTGGTCCATGTATGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029654.15 ENSMUST00000135043.8 |
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| 3UTR-3UTR GCA 90 bp | TTCTGGAGTCTAACAGTAATCTGGACTCACATGTCACCACACTATTTAGGTTTGGACTTTACAGGGTCATaGTGCCATTCAAAAGTAAGG | + |
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Preference number: 2 (lower is better) Translates to: FWSLTVIWTHMSPHYLGLDFTGS*CHSKVR Trigger: CCTTACTTTTGAATGGCAGCATGACCCTGTAAAGTC...CAAACCTAAATAGTGTGGTGACATGTGAGTCCAGATTACTGTTAGACTCCAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029654.15 ENSMUST00000135043.8 |
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| 3UTR-3UTR GCA 90 bp | AGTAATCTGGACTCACATGTCACCACACTATTTAGGTTTGAAATGTGTGCAACTGGGGATGTAAGATACTaGATACATGGACCAGTGAAC | + |
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Preference number: 2 (lower is better) Translates to: SNLDSHVTTLFRFEMCATGDVRY*IHGPVN Trigger: GTTCACTGGTCCATGTATGCAGTATCTTACATCCCC...AGTTGCACACATTTCAAACCTAAATAGTGTGGTGACATGTGAGTCCAGATTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029654.15 ENSMUST00000135043.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGACTGCCAGATGAATCTTAAATCATCGGTTGTATATCCAAAGCTCTCAAGTAAGATACTGCATACATaGACCAGTGAACATGACAGG | + |
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Preference number: 2 (lower is better) Translates to: PDCQMNLKSSVVYPKLSSKILHT*TSEHDR Trigger: CCTGTCATGTTCACTGGTCCATGTATGCAGTATCTT...ACTTGAGAGCTTTGGATATACAACCGATGATTTAAGATTCATCTGGCAGTCAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR CAA 90 bp | AATCTTAAATCATCGGTTGTATATCCAAAGCTCTCAAGTTGCATTTaGCAGCGTTGTGTGTCCATGGGAAACAGAGTTAAGTCTAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: NLKSSVVYPKLSSCI*QRCVSMGNRVKSRG Trigger: TCCTCTAGACTTAACTCTGTTTCCCATGGACACACAACGCTGCAAAATGCAACTTGAGAGCTTTGGATATACAACCGATGATTTAAGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR-3UTR GCA 90 bp | ATCTGGATTACTGGAAGTATTTGTAGTTACAGAGTTACAGTAGCTGAAGAGCACAGTATTCTTCTTAGCTaGGTTTCCACCTTTCCCATC | + |
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Preference number: 2 (lower is better) Translates to: IWITGSICSYRVTVAEEHSILLS*VSTFPI Trigger: GATGGGAAAGGTGGAAACGCAGCTAAGAAGAATACT...GTGCTCTTCAGCTACTGTAACTCTGTAACTACAAATACTTCCAGTAATCCAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR-3UTR CCA 90 bp | TATGAGTTGGCTGTACAAACTATCAACAAGAACAAAAGCACTCCAAATAACGCAAGCACTTATACATGGTaGGGTCAACTGTCAGTGCAT | + |
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Preference number: 2 (lower is better) Translates to: YELAVQTINKNKSTPNNASTYTW*GQLSVH Trigger: ATGCACTGACAGTTGACCCCACCATGTATAAGTGCT...TGCGTTATTTGGAGTGCTTTTGTTCTTGTTGATAGTTTGTACAGCCAACTCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTGGATTACTGGAAGTATTTGTAGTTACAGAGTTACAGTAGCTGAAGAGCACCAGAGTTACAGTAGCTaGAGAGCACATTATGTAGAT | + |
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Preference number: 2 (lower is better) Translates to: IWITGSICSYRVTVAEEHQSYSS*RAHYVD Trigger: ATCTACATAATGTGCTCTTCAGCTACTGTAACTCTG...GTGCTCTTCAGCTACTGTAACTCTGTAACTACAAATACTTCCAGTAATCCAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029654.15 ENSMUST00000135043.8 |
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| 3UTR-3UTR GCA 90 bp | AGTAATCTGGACTCACATGTCACCACACTATTTAGGTTTGAAATGTGTGCAACTACAGGATCTCCTGACTaGCAGATGAATCTTAAATCA | + |
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Preference number: 2 (lower is better) Translates to: SNLDSHVTTLFRFEMCATTGSPD*QMNLKS Trigger: TGATTTAAGATTCATCTGGCAGTCAGGAGATCCTGT...AGTTGCACACATTTCAAACCTAAATAGTGTGGTGACATGTGAGTCCAGATTACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR-3UTR CCA 90 bp | TATGAGTTGGCTGTACAAACTATCAACAAGAACAAAAGCACTCCAAATAACGCAAGCGTTGTGTGTCCATaGGAAACAGAGTTAAGTCTA | + |
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Preference number: 2 (lower is better) Translates to: YELAVQTINKNKSTPNNASVVCP*ETELSL Trigger: TAGACTTAACTCTGTTTCCCATGGACACACAACGCT...TGCGTTATTTGGAGTGCTTTTGTTCTTGTTGATAGTTTGTACAGCCAACTCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR CAA 90 bp | AGTCTAACAGTAATCTGGACTCACATGTCACCACACTATTTAGGTTaGAAATGTGTGCAACTCTTTTTAAGGCTTATGCTTAATGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: SLTVIWTHMSPHYLG*KCVQLFLRLMLNAL Trigger: GAGAGCATTAAGCATAAGCCTTAAAAAGAGTTGCACACATTTCAAACCTAAATAGTGTGGTGACATGTGAGTCCAGATTACTGTTAGACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029654.15 ENSMUST00000135043.8 |
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| 3UTR-3UTR TCA 90 bp | CAATATACATACATCTATCTATCTATCTCACAGTCGGTGCACAGACTTTACAGGACAGATCAGCAATTATaGATTGCATTGGTCACAATG | + |
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Preference number: 2 (lower is better) Translates to: QYTYIYLSISQSVHRLYRTDQQL*IALVTM Trigger: CATTGTGACCAATGCAATTCATAATTGCTGATCTGT...CCTGTAAAGTCTGTGCACCGACTGTGAGATAGATAGATAGATGTATGTATATTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029654.15 ENSMUST00000135043.8 |
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| 3UTR-3UTR GCA 90 bp | TACATACATCTATCTATCTATCTCACAGTCGGTGCACAGACTTTACAGGGTCATATATTGCTAGGAAAATaGAAAGTTTCCACAGATCAG | + |
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Preference number: 2 (lower is better) Translates to: YIHLSIYLTVGAQTLQGHILLGK*KVSTDQ Trigger: CTGATCTGTGGAAACTTTGCATTTTCCTAGCAATAT...ATGACCCTGTAAAGTCTGTGCACCGACTGTGAGATAGATAGATAGATGTATGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029654.15 ENSMUST00000135043.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCCATACCAACCAATGAAAGGCATGAAAATAGACTTTGATTTAAGGTGGATTGACTTTACAGGGTCATaGTGCCATTCAAAAGTAAGG | + |
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Preference number: 2 (lower is better) Translates to: SPYQPMKGMKIDFDLRWIDFTGS*CHSKVR Trigger: CCTTACTTTTGAATGGCAGCATGACCCTGTAAAGTC...AATCCACCTTAAATCAAAGTCTATTTTCATGCCTTTCATTGGTTGGTATGGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029654.15 ENSMUST00000135043.8 |
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| 3UTR-3UTR GCA 90 bp | AAATGTGTGCAACTCTTTTTAAGGCTTATGCTTAATGCTCTCCATACCAACCAATCACTATTTGTATTTTaGCAGAAGCCAGAACTTGCT | + |
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Preference number: 2 (lower is better) Translates to: KCVQLFLRLMLNALHTNQSLFVF*QKPELA Trigger: AGCAAGTTCTGGCTTCTGGCAAAATACAAATAGTGA...TTGGTTGGTATGGAGAGCATTAAGCATAAGCCTTAAAAAGAGTTGCACACATTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029654.15 ENSMUST00000135043.8 |
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| 3UTR-3UTR TCA 90 bp | ATTACTGGAAGTATTTGTAGTTACAGAGTTACAGTAGCTGAAGAGCACATTATGACAGATCAGCAATTATaGATTGCATTGGTCACAATG | + |
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Preference number: 2 (lower is better) Translates to: ITGSICSYRVTVAEEHIMTDQQL*IALVTM Trigger: CATTGTGACCAATGCAATTCATAATTGCTGATCTGT...CATAATGTGCTCTTCAGCTACTGTAACTCTGTAACTACAAATACTTCCAGTAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029654.15 ENSMUST00000135043.8 |
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| 3UTR TCA 72 bp | GCTCGGCTGCGAGGGTGGTGCACTCTGAGGCCAAACTaGGCACGGAGAAGATGCCCAGAGGTACTCTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: ARLRGWCTLRPN*ARRRCPEVLWQ Trigger: CTGCCAGAGTACCTCTGGGCATCTTCTCCGTGCTCAGTTTGGCCTCAGAGTGCACCACCCTCGCAGCCGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR TCA 72 bp | CACTTTAGGAAGCTCGGCTGCGAGGGTGGTGCACTCTaGGGCCAAACTGAGCACGGAGAAGATGCCCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: HFRKLGCEGGAL*GQTEHGEDAQR Trigger: CCTCTGGGCATCTTCTCCGTGCTCAGTTTGGCCTCAGAGTGCACCACCCTCGCAGCCGAGCTTCCTAAAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR TCA 72 bp | CCACGAGGGAGGCAAACCCGAAGAGCAGGCAGGCAATaGGCCACACATCCAGCGCCTTCACATAAGACACTT | + |
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Preference number: 3 (lower is better) Translates to: PRGRQTRRAGRQ*ATHPAPSHKTL Trigger: AAGTGTCTTATGTGAAGGCGCTGGATGTGTGGCTCATTGCCTGCCTGCTCTTCGGGTTTGCCTCCCTCGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR CCA 72 bp | TCGGCTTCAACCCTTTTGGGATTGTTCAGCATCACCTaGACCACAGCGTACTCCACGAGGGAGGCAAACCCG | + |
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Preference number: 3 (lower is better) Translates to: SASTLLGLFSIT*TTAYSTREANP Trigger: CGGGTTTGCCTCCCTCGTGGAGTACGCTGTGGTCCAGGTGATGCTGAACAATCCCAAAAGGGTTGAAGCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR GCA 72 bp | AGGGGTCCCCGTGCCGTTTACAGTATTCTTCTTAGCTaGGTTTCCACCTTTCCCATCTGCTTGCTCAGCCTT | + |
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Preference number: 3 (lower is better) Translates to: RGPRAVYSILLS*VSTFPICLLSL Trigger: AAGGCTGAGCAAGCAGATGGGAAAGGTGGAAACGCAGCTAAGAAGAATACTGTAAACGGCACGGGGACCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR GCA 72 bp | AGTATTCTTCTTAGCTGCGTTTCCACCTTTCCCATCTaGTTGCTCAGCCTTAGCTATTCGGGCCTTCTCGGC | + |
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Preference number: 3 (lower is better) Translates to: SILLSCVSTFPI*LLSLSYSGLLG Trigger: GCCGAGAAGGCCCGAATAGCTAAGGCTGAGCAAGCAGATGGGAAAGGTGGAAACGCAGCTAAGAAGAATACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR CCA 72 bp | AGGCTTGGCAGGCGGAGGCTTCTTGTTCTTTGCCTGTaGTTTCCCAAGTCCATTGTTGACTTCGATGGGTTT | + |
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Preference number: 3 (lower is better) Translates to: RLGRRRLLVLCL*FPKSIVDFDGF Trigger: AAACCCATCGAAGTCAACAATGGACTTGGGAAACCACAGGCAAAGAACAAGAAGCCTCCGCCTGCCAAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR TCA 72 bp | TTGCATCTGGTCTCACCAACCTGCAAAGTGCTGATATaGACAGGGGTCCCCGTGCCGTTTACAGTATTCTTC | + |
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Preference number: 3 (lower is better) Translates to: LHLVSPTCKVLI*TGVPVPFTVFF Trigger: GAAGAATACTGTAAACGGCACGGGGACCCCTGTTCATATCAGCACTTTGCAGGTTGGTGAGACCAGATGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| 3UTR GCA 72 bp | AGAGAGCCAGGAGAGAACCACAATCAGCAAGGTTGGTaGATATACGCCCATCATGTAGAACCCAACCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: REPGENHNQQGW*IYAHHVEPNLS Trigger: AGACAGGTTGGGTTCTACATGATGGGCGTATATGCACCAACCTTGCTGATTGTGGTTCTCTCCTGGCTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
||
| 3UTR CCA 72 bp | GAAAGAGAGCCAGGAGAGAACCACAATCAGCAAGGTTaGTGCATATACGCCCATCATGTAGAACCCAACCTG | + |
|
Preference number: 3 (lower is better) Translates to: EREPGENHNQQG*CIYAHHVEPNL Trigger: CAGGTTGGGTTCTACATGATGGGCGTATATGCACCAACCTTGCTGATTGTGGTTCTCTCCTGGCTCTCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTTTGCCTGTGGTTTCCCAAGTCCATTGTTGACTTCGATGGGTTTCCCATATCGGCTTCAACCCTTTaGGGATTGTTCAGCATCACC | + |
|
Preference number: 3 (lower is better) Translates to: VLCLWFPKSIVDFDGFPISASTL*GLFSIT Trigger: GGTGATGCTGAACAATCCCAAAAGGGTTGAAGCCGA...TATGGGAAACCCATCGAAGTCAACAATGGACTTGGGAAACCACAGGCAAAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGAAAGGAAATAATGCTCTTGCATAAAGGTCGATGCGCTTGGCTGCTGTTGAAGTCACTAGGTAGCTaGAGTCTGGGGTCATTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: SRKEIMLLHKGRCAWLLLKSLGS*SLGSFH Trigger: ATGGAATGACCCCAGACTCAAGCTACCTAGTGACTT...CAACAGCAGCCAAGCGCATCGACCTTTATGCAAGAGCATTATTTCCTTTCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
||
| 3UTR GCA 72 bp | GGCTTTCTTTCTTACAAGGAAGGGGATGTAAGATACTaGATACATGGACCAGTGAACATGACAGGGGTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: GFLSYKEGDVRY*IHGPVNMTGVS Trigger: GCTGACCCCTGTCATGTTCACTGGTCCATGTATGCAGTATCTTACATCCCCTTCCTTGTAAGAAAGAAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029654.15 ENSMUST00000135043.8 |
||
| 3UTR CCA 72 bp | TTCTTACAAGGAAGGGGATGTAAGATACTGCATACATaGACCAGTGAACATGACAGGGGTCAGCGTGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: FLQGRGCKILHT*TSEHDRGQRAH Trigger: ATGTGCACGCTGACCCCTGTCATGTTCACTGGTCCATGTATGCAGTATCTTACATCCCCTTCCTTGTAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029654.15 ENSMUST00000135043.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGAAAGGAAATAATGCTCTTGCATAAAGGTCGATGCGCTTGGCTGCTGTTGGAAGTACAAACTTTTTaGCATCTGGTCTCACCAACC | + |
|
Preference number: 3 (lower is better) Translates to: SRKEIMLLHKGRCAWLLLEVQTF*HLVSPT Trigger: GGTTGGTGAGACCAGATGCAAAAAAGTTTGTACTTC...CAACAGCAGCCAAGCGCATCGACCTTTATGCAAGAGCATTATTTCCTTTCTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
||
| 3UTR TCA 72 bp | TCTTGTTCTTTGCCTGTGGTTTCCCAAGTCCATTGTTaGCTTCGATGGGTTTCCCATAGCAGTCATAATTGG | + |
|
Preference number: 3 (lower is better) Translates to: SCSLPVVSQVHC*LRWVSHSSHNW Trigger: CCAATTATGACTGCTATGGGAAACCCATCGAAGTCAACAATGGACTTGGGAAACCACAGGCAAAGAACAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
||
| 3UTR CCA 72 bp | AGCTCTCAAGTTGCATTTTGCAGCGTTGTGTGTCCATaGGAAACAGAGTTAAGTCTAGAGGACATGAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SSQVAFCSVVCP*ETELSLEDMKV Trigger: CACTTTCATGTCCTCTAGACTTAACTCTGTTTCCCATGGACACACAACGCTGCAAAATGCAACTTGAGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCATACATGGACCAGTGAACATGACAGGGGTCAGCGTGCACATTATGTTTTCAATCACTATTTGTATTTaGCCAGAAGCCAGAACTTGC | + |
|
Preference number: 3 (lower is better) Translates to: CIHGPVNMTGVSVHIMFSITICI*PEARTC Trigger: GCAAGTTCTGGCTTCTGGCAAAATACAAATAGTGAT...TGAAAACATAATGTGCACGCTGACCCCTGTCATGTTCACTGGTCCATGTATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029654.15 ENSMUST00000135043.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAAAGCTCTCAAGTTGCATTTTGCAGCGTTGTGTGTCCATGGGAAACAGAGTTCTCTATAGTCCATTGTaGTCTCTTGAATGGATCCAA | + |
|
Preference number: 3 (lower is better) Translates to: PKLSSCILQRCVSMGNRVLYSPL*SLEWIQ Trigger: TTGGATCCATTCAAGAGACAACAATGGACTATAGAG...AACTCTGTTTCCCATGGACACACAACGCTGCAAAATGCAACTTGAGAGCTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
||
| 3UTR GCA 72 bp | CATCGGTTGTATATCCAAAGCTCTCAAGTTGCATTTTaGAGCGTTGTGTGTCCATGGGAAACAGAGTTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: HRLYIQSSQVAF*SVVCPWETELS Trigger: ACTTAACTCTGTTTCCCATGGACACACAACGCTGCAAAATGCAACTTGAGAGCTTTGGATATACAACCGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGACTGCCAGATGAATCTTAAATCATCGGTTGTATATCCAAAGCTCTCAAGTTCAACAGGAATGCCTTaGAAGTTTGGTCTGATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PDCQMNLKSSVVYPKLSSSTGMP*KFGLIL Trigger: CAGGATCAGACCAAACTTCAAAGGCATTCCTGTTGA...ACTTGAGAGCTTTGGATATACAACCGATGATTTAAGATTCATCTGGCAGTCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCTGGATTACTGGAAGTATTTGTAGTTACAGAGTTACAGTAGCTGAAGAGCACTTGCATTTTGCAGCGTaGTGTGTCCATGGGAAACAG | + |
|
Preference number: 3 (lower is better) Translates to: IWITGSICSYRVTVAEEHLHFAA*CVHGKQ Trigger: CTGTTTCCCATGGACACACAACGCTGCAAAATGCAA...GTGCTCTTCAGCTACTGTAACTCTGTAACTACAAATACTTCCAGTAATCCAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCTGGATTACTGGAAGTATTTGTAGTTACAGAGTTACAGTAGCTGAAGAGCACTTCCCAAGTCCATTGTaGACTTCGATGGGTTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: IWITGSICSYRVTVAEEHFPSPL*TSMGFP Trigger: TGGGAAACCCATCGAAGTCAACAATGGACTTGGGAA...GTGCTCTTCAGCTACTGTAACTCTGTAACTACAAATACTTCCAGTAATCCAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
||
| 3UTR GCA 72 bp | CTATCTCACAGTCGGTGCACAGACTTTACAGGGTCATaGTGCCATTCAAAAGTAAGGTGCTGTATTTTATTA | + |
|
Preference number: 3 (lower is better) Translates to: LSHSRCTDFTGS*CHSKVRCCILL Trigger: TAATAAAATACAGCACCTTACTTTTGAATGGCAGCATGACCCTGTAAAGTCTGTGCACCGACTGTGAGATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029654.15 ENSMUST00000135043.8 |
||
| 3UTR GCA 72 bp | CTTAAATCATCGGTTGTATATCCAAAGCTCTCAAGTTaGATTTTGCAGCGTTGTGTGTCCATGGGAAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: LKSSVVYPKLSS*ILQRCVSMGNR Trigger: TCTGTTTCCCATGGACACACAACGCTGCAAAATGCAACTTGAGAGCTTTGGATATACAACCGATGATTTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
||
| 3UTR-3UTR CAA 90 bp | TATGAGTTGGCTGTACAAACTATCAACAAGAACAAAAGCACTCCAAATAACGCAGGTTTCCCAAGTCCATaGTTGACTTCGATGGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: YELAVQTINKNKSTPNNAGFPSP*LTSMGF Trigger: GAAACCCATCGAAGTCAACAATGGACTTGGGAAACC...TGCGTTATTTGGAGTGCTTTTGTTCTTGTTGATAGTTTGTACAGCCAACTCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
||
| 3UTR-3UTR CAA 90 bp | AAATGTGTGCAACTCTTTTTAAGGCTTATGCTTAATGCTCTCCATACCAACCAATCCAAAGCTCTCAAGTaGCATTTTGCAGCGTTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: KCVQLFLRLMLNALHTNQSKALK*HFAALC Trigger: ACACAACGCTGCAAAATGCAACTTGAGAGCTTTGGA...TTGGTTGGTATGGAGAGCATTAAGCATAAGCCTTAAAAAGAGTTGCACACATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGACTGCCAGATGAATCTTAAATCATCGGTTGTATATCCAAAGCTCTCAAGTGTCCATTGTTGTCTCTaGAATGGATCCAAAACTATT | + |
|
Preference number: 3 (lower is better) Translates to: PDCQMNLKSSVVYPKLSSVHCCL*NGSKTI Trigger: AATAGTTTTGGATCCATTCAAGAGACAACAATGGAC...ACTTGAGAGCTTTGGATATACAACCGATGATTTAAGATTCATCTGGCAGTCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCTGGATTACTGGAAGTATTTGTAGTTACAGAGTTACAGTAGCTGAAGAGCACTACATCTATCACTATTaGTATTTTGCCAGAAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: IWITGSICSYRVTVAEEHYIYHY*YFARSQ Trigger: CTGGCTTCTGGCAAAATACAAATAGTGATAGATGTA...GTGCTCTTCAGCTACTGTAACTCTGTAACTACAAATACTTCCAGTAATCCAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029654.15 ENSMUST00000135043.8 |
||
| 3UTR CCA 72 bp | GTTCATGCTAACAATTTCTGGAGTCTAACAGTAATCTaGACTCACATGTCACCACACTATTTAGGTTTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: VHANNFWSLTVI*THMSPHYLGLK Trigger: TTTCAAACCTAAATAGTGTGGTGACATGTGAGTCCAGATTACTGTTAGACTCCAGAAATTGTTAGCATGAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029654.15 ENSMUST00000135043.8 |
||
| 3UTR GCA 72 bp | TCTATCACTATTTGTATTTTGCCAGAAGCCAGAACTTaGTATGCATTTATACTAGCCCAGATTTCTCTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: SITICILPEART*YAFILAQISLF Trigger: GAAAAGAGAAATCTGGGCTAGTATAAATGCATAGCAAGTTCTGGCTTCTGGCAAAATACAAATAGTGATAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029654.15 ENSMUST00000135043.8 |
||
| 3UTR CCA 72 bp | ATGATTTTTCCATTTCAAGTTCATGCTAACAATTTCTaGAGTCTAACAGTAATCTGGACTCACATGTCACCA | + |
|
Preference number: 3 (lower is better) Translates to: MIFPFQVHANNF*SLTVIWTHMSP Trigger: TGGTGACATGTGAGTCCAGATTACTGTTAGACTCCAGAAATTGTTAGCATGAACTTGAAATGGAAAAATCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029654.15 ENSMUST00000135043.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGGTTGGTGCATATACGCCCATCATGTAGAACCCAACCTGTCTCCTCAGGGTATTGCTGGTGGAGTTaGGGGGCACACGGGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ARLVHIRPSCRTQPVSSGYCWWS*GAHGPG Trigger: ACCTGGCCCGTGTGCCCCCCAACTCCACCAGCAATA...CCCTGAGGAGACAGGTTGGGTTCTACATGATGGGCGTATATGCACCAACCTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
||
| 3UTR CAA 72 bp | GCTATTCGGGCCTTCTCGGCTTCAACCCTTTTGGGATaGTTCAGCATCACCTGGACCACAGCGTACTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: AIRAFSASTLLG*FSITWTTAYST Trigger: CGTGGAGTACGCTGTGGTCCAGGTGATGCTGAACAATCCCAAAAGGGTTGAAGCCGAGAAGGCCCGAATAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
||
| 3UTR CAA 72 bp | GCCTTAGCTATTCGGGCCTTCTCGGCTTCAACCCTTTaGGGATTGTTCAGCATCACCTGGACCACAGCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ALAIRAFSASTL*GLFSITWTTAY Trigger: GTACGCTGTGGTCCAGGTGATGCTGAACAATCCCAAAAGGGTTGAAGCCGAGAAGGCCCGAATAGCTAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
||
| CDS-3UTR CCA 90 bp | CAGGTTTCCACAAGCACTTATACATGGTGGGGTCAACTGTCAGTGCATCTGAGCAGGTCCTCGGGTGACTaGATGGGCACAAGTACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QVSTSTYTWWGQLSVHLSRSSGD*MGTSTA Trigger: AGCAGTACTTGTGCCCATCCAGTCACCCGAGGACCT...GCTCAGATGCACTGACAGTTGACCCCACCATGTATAAGTGCTTGTGGAAACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
||
| 3UTR CAA 72 bp | ATTCTTCTTAGCTGCGTTTCCACCTTTCCCATCTGCTaGCTCAGCCTTAGCTATTCGGGCCTTCTCGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILLSCVSTFPIC*LSLSYSGLLGF Trigger: GAAGCCGAGAAGGCCCGAATAGCTAAGGCTGAGCAAGCAGATGGGAAAGGTGGAAACGCAGCTAAGAAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
||
| CDS-3UTR TCA 90 bp | GGGGATGTAAGATACTGCATACATGGACCAGTGAACATGACAGGGGTCAGCGTGTCCCAAGTCCATTGTTaGCTTCGATGGGTTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GDVRYCIHGPVNMTGVSVSQVHC*LRWVSH Trigger: ATGGGAAACCCATCGAAGTCAACAATGGACTTGGGA...CACGCTGACCCCTGTCATGTTCACTGGTCCATGTATGCAGTATCTTACATCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
||
| CDS-3UTR TCA 90 bp | CAGGAAATGAAAGTCTGTAATTTTCTACTTGTTGCACTTGGTCTTTTCAGGCCTGGCCAGGTCCTCGGGTaGCTGCTGAGATGGGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: QEMKVCNFLLVALGLFRPGQVLG*LLRWAQ Trigger: TTGTGCCCATCTCAGCAGTCACCCGAGGACCTGGCC...AGGCCTGAAAAGACCAAGTGCAACAAGTAGAAAATTACAGACTTTCATTTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107743.8 |
||
| CDS-3UTR CCA 90 bp | TTCTGGAGTCTAACAGTAATCTGGACTCACATGTCACCACACTATTTAGGTTTGTATTGCTGGTGGAGTTaGGGGGCACACGGGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FWSLTVIWTHMSPHYLGLYCWWS*GAHGPG Trigger: ACCTGGCCCGTGTGCCCCCCAACTCCACCAGCAATA...CAAACCTAAATAGTGTGGTGACATGTGAGTCCAGATTACTGTTAGACTCCAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029654.15 ENSMUST00000135043.8 |
||
| CDS-3UTR CCA 90 bp | AGTAATCTGGACTCACATGTCACCACACTATTTAGGTTTGAAATGTGTGCAACTGCTCGGCTGCGAGGGTaGTGCACTCTGAGGCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SNLDSHVTTLFRFEMCATARLRG*CTLRPN Trigger: GTTTGGCCTCAGAGTGCACCACCCTCGCAGCCGAGC...AGTTGCACACATTTCAAACCTAAATAGTGTGGTGACATGTGAGTCCAGATTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
||
| CDS-3UTR TCA 90 bp | TTTCTACTTGTTGCACTTGGTCTTTTCAGGCCTCGCGTTTTCAGGATAGGATGCTCCTGGGATCATAACTaGCCAGCAGCCTGTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLLVALGLFRPRVFRIGCSWDHN*PAACSR Trigger: TCTTGAACAGGCTGCTGGTCAGTTATGATCCCAGGA...GCATCCTATCCTGAAAACGCGAGGCCTGAAAAGACCAAGTGCAACAAGTAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107743.8 |
||
| CDS-3UTR TCA 90 bp | TACATACATCTATCTATCTATCTCACAGTCGGTGCACAGACTTTACAGGGTCATTGCAAAGTGCTGATATaGACAGGGGTCCCCGTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: YIHLSIYLTVGAQTLQGHCKVLI*TGVPVP Trigger: CGGCACGGGGACCCCTGTTCATATCAGCACTTTGCA...ATGACCCTGTAAAGTCTGTGCACCGACTGTGAGATAGATAGATAGATGTATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
||
| CDS-3UTR TCA 90 bp | AGGAATGCCTTTGAAGTTTGGTCTGATCCTGGGATCATAACTGACCAGCAGCCTTTTCGCACATTGAGTTaGGGATGGGCACAAGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: RNAFEVWSDPGIITDQQPFRTLS*GWAQVL Trigger: CAGTACTTGTGCCCATCCTCAACTCAATGTGCGAAA...AGGCTGCTGGTCAGTTATGATCCCAGGATCAGACCAAACTTCAAAGGCATTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132330.2 |
||
| CDS-3UTR GCA 90 bp | GTAAGATACTGCATACATGGACCAGTGAACATGACAGGGGTCAGCGTGCACATTTCCACCTTTCCCATCTaGTTGCTCAGCCTTAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: VRYCIHGPVNMTGVSVHISTFPI*LLSLSY Trigger: ATAGCTAAGGCTGAGCAAGCAGATGGGAAAGGTGGA...AATGTGCACGCTGACCCCTGTCATGTTCACTGGTCCATGTATGCAGTATCTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
||
| CDS-3UTR CCA 90 bp | CAGGAAATGAAAGTCTGTAATTTTCTACTTGTTGCACTTGGTCTTTTCAGGCCTTATTGCTGGTGGAGTTaGGGGGCACACGGGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QEMKVCNFLLVALGLFRPYCWWS*GAHGPG Trigger: ACCTGGCCCGTGTGCCCCCCAACTCCACCAGCAATA...AGGCCTGAAAAGACCAAGTGCAACAAGTAGAAAATTACAGACTTTCATTTCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000107743.8 |
||
| CDS-3UTR CCA 90 bp | AGTAATCTGGACTCACATGTCACCACACTATTTAGGTTTGAAATGTGTGCAACTGCGCTTGGCTGCTGTTaGGATGACAGGCTTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SNLDSHVTTLFRFEMCATALGCC*DDRLGR Trigger: CCTGCCAAGCCTGTCATCCCAACAGCAGCCAAGCGC...AGTTGCACACATTTCAAACCTAAATAGTGTGGTGACATGTGAGTCCAGATTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
||
| CDS-3UTR TCA 90 bp | ATTACTGGAAGTATTTGTAGTTACAGAGTTACAGTAGCTGAAGAGCACATTATGGGCCAGGTCCTCGGGTaGCTGCTGAGATGGGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: ITGSICSYRVTVAEEHIMGQVLG*LLRWAQ Trigger: TTGTGCCCATCTCAGCAGTCACCCGAGGACCTGGCC...CATAATGTGCTCTTCAGCTACTGTAACTCTGTAACTACAAATACTTCCAGTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
||
| CDS-3UTR CCA 90 bp | GTGCACAGACTTTACAGGGTCATGCTGCCATTCAAAAGTAAGGTGCTGTATTTTTTGTTCAGCATCACCTaGACCACAGCGTACTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: VHRLYRVMLPFKSKVLYFLFSIT*TTAYST Trigger: CGTGGAGTACGCTGTGGTCCAGGTGATGCTGAACAA...AAAATACAGCACCTTACTTTTGAATGGCAGCATGACCCTGTAAAGTCTGTGCAC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
||
| CDS-3UTR GCA 90 bp | CTTGTTGCACTTGGTCTTTTCAGGCCTCGCGTTTTCAGGATAGGATGCTCAACCACAGGATCTCCTGACTaGCAGATGAATCTTAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: LVALGLFRPRVFRIGCSTTGSPD*QMNLKS Trigger: TGATTTAAGATTCATCTGGCAGTCAGGAGATCCTGT...GGTTGAGCATCCTATCCTGAAAACGCGAGGCCTGAAAAGACCAAGTGCAACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107743.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTACTTGTTGCACTTGGTCTTTTCAGGCCTCGCGTTTTCAGGATAGGATGCAGCACTTATACATGGTaGGGTCAACTGTCAGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FLLVALGLFRPRVFRIGCSTYTW*GQLSVH Trigger: ATGCACTGACAGTTGACCCCACCATGTATAAGTGCT...GCATCCTATCCTGAAAACGCGAGGCCTGAAAAGACCAAGTGCAACAAGTAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107743.8 |
||
| CDS-3UTR CCA 90 bp | GTAAGATACTGCATACATGGACCAGTGAACATGACAGGGGTCAGCGTGCACATTAGCGTTGTGTGTCCATaGGAAACAGAGTTAAGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: VRYCIHGPVNMTGVSVHISVVCP*ETELSL Trigger: TAGACTTAACTCTGTTTCCCATGGACACACAACGCT...AATGTGCACGCTGACCCCTGTCATGTTCACTGGTCCATGTATGCAGTATCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
||
| CDS-3UTR TCA 90 bp | AGCGTGCACATTATGTTTTCATCTGGATTACTGGAAGTATTTGTAGTTACAGAGCAACCTGCAAAGTGCTaGTATGAACAGGGGTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SVHIMFSSGLLEVFVVTEQPAKC*YEQGSP Trigger: CGGGGACCCCTGTTCATATCAGCACTTTGCAGGTTG...CTCTGTAACTACAAATACTTCCAGTAATCCAGATGAAAACATAATGTGCACGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
||
| CDS-3UTR GCA 90 bp | CAATATACATACATCTATCTATCTATCTCACAGTCGGTGCACAGACTTTACAGGCCTTTCCCATCTGCTTaGTCAGCCTTAGCTATTCGG | + |
|
Preference number: 4 (lower is better) Translates to: QYTYIYLSISQSVHRLYRPFPSA*SALAIR Trigger: CCGAATAGCTAAGGCTGAGCAAGCAGATGGGAAAGG...CCTGTAAAGTCTGTGCACCGACTGTGAGATAGATAGATAGATGTATGTATATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
||
| CDS-3UTR GCA 90 bp | ATCTGGATTACTGGAAGTATTTGTAGTTACAGAGTTACAGTAGCTGAAGAGCACGAACAGGGGTCCCCGTaGCGTTTACAGTATTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IWITGSICSYRVTVAEEHEQGSP*RLQYSS Trigger: AGAAGAATACTGTAAACGGCACGGGGACCCCTGTTC...GTGCTCTTCAGCTACTGTAACTCTGTAACTACAAATACTTCCAGTAATCCAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
||
| CDS-3UTR CCA 90 bp | TTTCTACTTGTTGCACTTGGTCTTTTCAGGCCTCGCGTTTTCAGGATAGGATGCAATGCCTTTGAAGTTTaGTCTGATCCTGGGATCATA | + |
|
Preference number: 4 (lower is better) Translates to: FLLVALGLFRPRVFRIGCNAFEV*SDPGII Trigger: TATGATCCCAGGATCAGACCAAACTTCAAAGGCATT...GCATCCTATCCTGAAAACGCGAGGCCTGAAAAGACCAAGTGCAACAAGTAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107743.8 |
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| CDS-3UTR CCA 90 bp | TTCTGGAGTCTAACAGTAATCTGGACTCACATGTCACCACACTATTTAGGTTTGCGGCTTCAACCCTTTTaGGATTGTTCAGCATCACCT | + |
|
Preference number: 4 (lower is better) Translates to: FWSLTVIWTHMSPHYLGLRLQPF*DCSASP Trigger: AGGTGATGCTGAACAATCCCAAAAGGGTTGAAGCCG...CAAACCTAAATAGTGTGGTGACATGTGAGTCCAGATTACTGTTAGACTCCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
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| 3UTR CAA 72 bp | TCATCGGTTGTATATCCAAAGCTCTCAAGTTGCATTTaGCAGCGTTGTGTGTCCATGGGAAACAGAGTTAAG | + |
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Preference number: 4 (lower is better) Translates to: SSVVYPKLSSCI*QRCVSMGNRVK Trigger: CTTAACTCTGTTTCCCATGGACACACAACGCTGCAAAATGCAACTTGAGAGCTTTGGATATACAACCGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| CDS-3UTR GCA 90 bp | GTGCACAGACTTTACAGGGTCATGCTGCCATTCAAAAGTAAGGTGCTGTATTTTAGTATTCTTCTTAGCTaGGTTTCCACCTTTCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: VHRLYRVMLPFKSKVLYFSILLS*VSTFPI Trigger: GATGGGAAAGGTGGAAACGCAGCTAAGAAGAATACT...AAAATACAGCACCTTACTTTTGAATGGCAGCATGACCCTGTAAAGTCTGTGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
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| CDS-3UTR GCA 90 bp | AAATGTGTGCAACTCTTTTTAAGGCTTATGCTTAATGCTCTCCATACCAACCAATTGCATAAAGGTCGATaGGCTTGGCTGCTGTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KCVQLFLRLMLNALHTNQLHKGR*AWLLLG Trigger: TCCCAACAGCAGCCAAGCGCATCGACCTTTATGCAA...TTGGTTGGTATGGAGAGCATTAAGCATAAGCCTTAAAAAGAGTTGCACACATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
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| CDS-3UTR TCA 90 bp | ATTACTGGAAGTATTTGTAGTTACAGAGTTACAGTAGCTGAAGAGCACATTATGTCCTGGGATCATAACTaGCCAGCAGCCTGTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ITGSICSYRVTVAEEHIMSWDHN*PAACSR Trigger: TCTTGAACAGGCTGCTGGTCAGTTATGATCCCAGGA...CATAATGTGCTCTTCAGCTACTGTAACTCTGTAACTACAAATACTTCCAGTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
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| CDS-3UTR GCA 90 bp | CAGGAAATGAAAGTCTGTAATTTTCTACTTGTTGCACTTGGTCTTTTCAGGCCTCCAAAGCTCTCAAGTTaGATTTTGCAGCGTTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QEMKVCNFLLVALGLFRPPKLSS*ILQRCV Trigger: CACACAACGCTGCAAAATGCAACTTGAGAGCTTTGG...AGGCCTGAAAAGACCAAGTGCAACAAGTAGAAAATTACAGACTTTCATTTCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107743.8 |
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| CDS-3UTR TCA 90 bp | CACAGATCAGCAATTATGAATTGCATTGGTCACAATGAAATGGTGCTGTATTTCCTCCTGACTGCCAGATaGATCTTAAATCATCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HRSAIMNCIGHNEMVLYFLLTAR*ILNHRL Trigger: CAACCGATGATTTAAGATTCATCTGGCAGTCAGGAG...GAAATACAGCACCATTTCATTGTGACCAATGCAATTCATAATTGCTGATCTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
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| CDS-3UTR CCA 90 bp | TACATACATCTATCTATCTATCTCACAGTCGGTGCACAGACTTTACAGGGTCATAATGCCTTTGAAGTTTaGTCTGATCCTGGGATCATA | + |
|
Preference number: 4 (lower is better) Translates to: YIHLSIYLTVGAQTLQGHNAFEV*SDPGII Trigger: TATGATCCCAGGATCAGACCAAACTTCAAAGGCATT...ATGACCCTGTAAAGTCTGTGCACCGACTGTGAGATAGATAGATAGATGTATGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
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| CDS-3UTR CCA 90 bp | AAATGTGTGCAACTCTTTTTAAGGCTTATGCTTAATGCTCTCCATACCAACCAAAGCACTTATACATGGTaGGGTCAACTGTCAGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KCVQLFLRLMLNALHTNQSTYTW*GQLSVH Trigger: ATGCACTGACAGTTGACCCCACCATGTATAAGTGCT...TTGGTTGGTATGGAGAGCATTAAGCATAAGCCTTAAAAAGAGTTGCACACATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
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| CDS-3UTR CCA 90 bp | CACAGATCAGCAATTATGAATTGCATTGGTCACAATGAAATGGTGCTGTATTTCACAAGCACTTATACATaGTGGGGTCAACTGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: HRSAIMNCIGHNEMVLYFTSTYT*WGQLSV Trigger: CACTGACAGTTGACCCCACCATGTATAAGTGCTTGT...GAAATACAGCACCATTTCATTGTGACCAATGCAATTCATAATTGCTGATCTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
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| CDS-3UTR CCA 90 bp | ATCTGGATTACTGGAAGTATTTGTAGTTACAGAGTTACAGTAGCTGAAGAGCACCTTGTTCTTTGCCTGTaGTTTCCCAAGTCCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IWITGSICSYRVTVAEEHLVLCL*FPKSIV Trigger: AACAATGGACTTGGGAAACCACAGGCAAAGAACAAG...GTGCTCTTCAGCTACTGTAACTCTGTAACTACAAATACTTCCAGTAATCCAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
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| 3UTR CAA 72 bp | TTGGATCTCAAATCAGACTTGGAAGTACAAACTTTTTaGCATCTGGTCTCACCAACCTGCAAAGTGCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: LDLKSDLEVQTF*HLVSPTCKVLI Trigger: TATCAGCACTTTGCAGGTTGGTGAGACCAGATGCAAAAAAGTTTGTACTTCCAAGTCTGATTTGAGATCCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135043.8 |
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| CDS-3UTR GCA 90 bp | ATTACTGGAAGTATTTGTAGTTACAGAGTTACAGTAGCTGAAGAGCACATTATGCCAAAGCTCTCAAGTTaGATTTTGCAGCGTTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ITGSICSYRVTVAEEHIMPKLSS*ILQRCV Trigger: CACACAACGCTGCAAAATGCAACTTGAGAGCTTTGG...CATAATGTGCTCTTCAGCTACTGTAACTCTGTAACTACAAATACTTCCAGTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
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| CDS-3UTR CCA 90 bp | ATTTCCCAGGAAATGAAAGTCTGTAATTTTCTACTTGTTGCACTTGGTCTTTTCACAAGCACTTATACATaGTGGGGTCAACTGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISQEMKVCNFLLVALGLFTSTYT*WGQLSV Trigger: CACTGACAGTTGACCCCACCATGTATAAGTGCTTGT...GAAAAGACCAAGTGCAACAAGTAGAAAATTACAGACTTTCATTTCCTGGGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107743.8 |
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| CDS-3UTR TCA 90 bp | AAATGTGTGCAACTCTTTTTAAGGCTTATGCTTAATGCTCTCCATACCAACCAAAGCTTCCAACAATGCTaGAGTCATTGGATCTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KCVQLFLRLMLNALHTNQSFQQC*SHWISN Trigger: ATTTGAGATCCAATGACTTCAGCATTGTTGGAAGCT...TTGGTTGGTATGGAGAGCATTAAGCATAAGCCTTAAAAAGAGTTGCACACATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
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| CDS-3UTR CCA 90 bp | ATTTCCCAGGAAATGAAAGTCTGTAATTTTCTACTTGTTGCACTTGGTCTTTTCAGCGTTGTGTGTCCATaGGAAACAGAGTTAAGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: ISQEMKVCNFLLVALGLFSVVCP*ETELSL Trigger: TAGACTTAACTCTGTTTCCCATGGACACACAACGCT...GAAAAGACCAAGTGCAACAAGTAGAAAATTACAGACTTTCATTTCCTGGGAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107743.8 |
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| 3UTR CAA 72 bp | GTAATCTGGACTCACATGTCACCACACTATTTAGGTTaGAAATGTGTGCAACTCTTTTTAAGGCTTATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VIWTHMSPHYLG*KCVQLFLRLML Trigger: AAGCATAAGCCTTAAAAAGAGTTGCACACATTTCAAACCTAAATAGTGTGGTGACATGTGAGTCCAGATTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029654.15 ENSMUST00000135043.8 |
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| CDS-3UTR GCA 90 bp | TCTCCATACCAACCAATGAAAGGCATGAAAATAGACTTTGATTTAAGGTGGATTACAGGATCTCCTGACTaGCAGATGAATCTTAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: SPYQPMKGMKIDFDLRWITGSPD*QMNLKS Trigger: TGATTTAAGATTCATCTGGCAGTCAGGAGATCCTGT...AATCCACCTTAAATCAAAGTCTATTTTCATGCCTTTCATTGGTTGGTATGGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
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| CDS-3UTR GCA 90 bp | ATTACTGGAAGTATTTGTAGTTACAGAGTTACAGTAGCTGAAGAGCACATTATGAGTATTTTGTACAGTTaGCATATTCGATATCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ITGSICSYRVTVAEEHIMSILYS*HIRYPP Trigger: AGGAGGATATCGAATATGGCAACTGTACAAAATACT...CATAATGTGCTCTTCAGCTACTGTAACTCTGTAACTACAAATACTTCCAGTAAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
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| CDS-3UTR CAA 90 bp | GGGGATGTAAGATACTGCATACATGGACCAGTGAACATGACAGGGGTCAGCGTGTCAACCCTTTTGGGATaGTTCAGCATCACCTGGACC | + |
|
Preference number: 5 (lower is better) Translates to: GDVRYCIHGPVNMTGVSVSTLLG*FSITWT Trigger: GGTCCAGGTGATGCTGAACAATCCCAAAAGGGTTGA...CACGCTGACCCCTGTCATGTTCACTGGTCCATGTATGCAGTATCTTACATCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
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| CDS-3UTR CAA 90 bp | CTTGTTGCACTTGGTCTTTTCAGGCCTCGCGTTTTCAGGATAGGATGCTCAACCTTGCATTTTGCAGCGTaGTGTGTCCATGGGAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: LVALGLFRPRVFRIGCSTLHFAA*CVHGKQ Trigger: CTGTTTCCCATGGACACACAACGCTGCAAAATGCAA...GGTTGAGCATCCTATCCTGAAAACGCGAGGCCTGAAAAGACCAAGTGCAACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107743.8 |
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| CDS-3UTR CAA 90 bp | GGGGATGTAAGATACTGCATACATGGACCAGTGAACATGACAGGGGTCAGCGTGTCCAAAGCTCTCAAGTaGCATTTTGCAGCGTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GDVRYCIHGPVNMTGVSVSKALK*HFAALC Trigger: ACACAACGCTGCAAAATGCAACTTGAGAGCTTTGGA...CACGCTGACCCCTGTCATGTTCACTGGTCCATGTATGCAGTATCTTACATCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
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| CDS-3UTR CAA 90 bp | GTAAGATACTGCATACATGGACCAGTGAACATGACAGGGGTCAGCGTGCACATTACCTTTCCCATCTGCTaGCTCAGCCTTAGCTATTCG | + |
|
Preference number: 5 (lower is better) Translates to: VRYCIHGPVNMTGVSVHITFPIC*LSLSYS Trigger: CGAATAGCTAAGGCTGAGCAAGCAGATGGGAAAGGT...AATGTGCACGCTGACCCCTGTCATGTTCACTGGTCCATGTATGCAGTATCTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
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| CDS-3UTR CAA 90 bp | CTTGTTGCACTTGGTCTTTTCAGGCCTCGCGTTTTCAGGATAGGATGCTCAACCTCCAAAGCTCTCAAGTaGCATTTTGCAGCGTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LVALGLFRPRVFRIGCSTSKALK*HFAALC Trigger: ACACAACGCTGCAAAATGCAACTTGAGAGCTTTGGA...GGTTGAGCATCCTATCCTGAAAACGCGAGGCCTGAAAAGACCAAGTGCAACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107743.8 |
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| CDS-3UTR CAA 90 bp | TTTCTACTTGTTGCACTTGGTCTTTTCAGGCCTCGCGTTTTCAGGATAGGATGCAAGTCACTAGGTAGCTaGAGTCTGGGGTCATTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: FLLVALGLFRPRVFRIGCKSLGS*SLGSFH Trigger: ATGGAATGACCCCAGACTCAAGCTACCTAGTGACTT...GCATCCTATCCTGAAAACGCGAGGCCTGAAAAGACCAAGTGCAACAAGTAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107743.8 |
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| CDS-3UTR CAA 90 bp | TATGAGTTGGCTGTACAAACTATCAACAAGAACAAAAGCACTCCAAATAACGCAGCAGGCGGAGGCTTCTaGTTCTTTGCCTGTGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: YELAVQTINKNKSTPNNAAGGGF*FFACGF Trigger: GAAACCACAGGCAAAGAACAAGAAGCCTCCGCCTGC...TGCGTTATTTGGAGTGCTTTTGTTCTTGTTGATAGTTTGTACAGCCAACTCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
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| CDS-3UTR CAA 90 bp | CAATATACATACATCTATCTATCTATCTCACAGTCGGTGCACAGACTTTACAGGTCGGCTTCAACCCTTTaGGGATTGTTCAGCATCACC | + |
|
Preference number: 5 (lower is better) Translates to: QYTYIYLSISQSVHRLYRSASTL*GLFSIT Trigger: GGTGATGCTGAACAATCCCAAAAGGGTTGAAGCCGA...CCTGTAAAGTCTGTGCACCGACTGTGAGATAGATAGATAGATGTATGTATATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
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| CDS-3UTR CAA 90 bp | TTTCTACTTGTTGCACTTGGTCTTTTCAGGCCTCGCGTTTTCAGGATAGGATGCGTCCATTGTTGTCTCTaGAATGGATCCAAAACTATT | + |
|
Preference number: 5 (lower is better) Translates to: FLLVALGLFRPRVFRIGCVHCCL*NGSKTI Trigger: AATAGTTTTGGATCCATTCAAGAGACAACAATGGAC...GCATCCTATCCTGAAAACGCGAGGCCTGAAAAGACCAAGTGCAACAAGTAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107743.8 |
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| CDS-3UTR CAA 90 bp | TATGAGTTGGCTGTACAAACTATCAACAAGAACAAAAGCACTCCAAATAACGCACCACAATCAGCAAGGTaGGTGCATATACGCCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: YELAVQTINKNKSTPNNAPQSAR*VHIRPS Trigger: TGATGGGCGTATATGCACCAACCTTGCTGATTGTGG...TGCGTTATTTGGAGTGCTTTTGTTCTTGTTGATAGTTTGTACAGCCAACTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
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| CDS-3UTR CAA 90 bp | ATCTGGATTACTGGAAGTATTTGTAGTTACAGAGTTACAGTAGCTGAAGAGCACGGTTTCCCAAGTCCATaGTTGACTTCGATGGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IWITGSICSYRVTVAEEHGFPSP*LTSMGF Trigger: GAAACCCATCGAAGTCAACAATGGACTTGGGAAACC...GTGCTCTTCAGCTACTGTAACTCTGTAACTACAAATACTTCCAGTAATCCAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
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| CDS-3UTR CAA 90 bp | CAATATACATACATCTATCTATCTATCTCACAGTCGGTGCACAGACTTTACAGGTCAACAGGAATGCCTTaGAAGTTTGGTCTGATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QYTYIYLSISQSVHRLYRSTGMP*KFGLIL Trigger: CAGGATCAGACCAAACTTCAAAGGCATTCCTGTTGA...CCTGTAAAGTCTGTGCACCGACTGTGAGATAGATAGATAGATGTATGTATATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
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| CDS-3UTR CAA 90 bp | CAGGAAATGAAAGTCTGTAATTTTCTACTTGTTGCACTTGGTCTTTTCAGGCCTTCAACAGGAATGCCTTaGAAGTTTGGTCTGATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QEMKVCNFLLVALGLFRPSTGMP*KFGLIL Trigger: CAGGATCAGACCAAACTTCAAAGGCATTCCTGTTGA...AGGCCTGAAAAGACCAAGTGCAACAAGTAGAAAATTACAGACTTTCATTTCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107743.8 |
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| CDS-3UTR CAA 90 bp | GTGCACAGACTTTACAGGGTCATGCTGCCATTCAAAAGTAAGGTGCTGTATTTTCTCTATAGTCCATTGTaGTCTCTTGAATGGATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: VHRLYRVMLPFKSKVLYFLYSPL*SLEWIQ Trigger: TTGGATCCATTCAAGAGACAACAATGGACTATAGAG...AAAATACAGCACCTTACTTTTGAATGGCAGCATGACCCTGTAAAGTCTGTGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
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| CDS-3UTR CAA 90 bp | ACTCACATGTCACCACACTATTTAGGTTTGAAATGTGTGCAACTCTTTTTAAGGAAGTCACTAGGTAGCTaGAGTCTGGGGTCATTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: THMSPHYLGLKCVQLFLRKSLGS*SLGSFH Trigger: ATGGAATGACCCCAGACTCAAGCTACCTAGTGACTT...CCTTAAAAAGAGTTGCACACATTTCAAACCTAAATAGTGTGGTGACATGTGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
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| CDS-3UTR CAA 90 bp | ATTTCCCAGGAAATGAAAGTCTGTAATTTTCTACTTGTTGCACTTGGTCTTTTCCCACAATCAGCAAGGTaGGTGCATATACGCCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: ISQEMKVCNFLLVALGLFPQSAR*VHIRPS Trigger: TGATGGGCGTATATGCACCAACCTTGCTGATTGTGG...GAAAAGACCAAGTGCAACAAGTAGAAAATTACAGACTTTCATTTCCTGGGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107743.8 |
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| CDS-3UTR CAA 90 bp | AAATGTGTGCAACTCTTTTTAAGGCTTATGCTTAATGCTCTCCATACCAACCAATTCCCAAGTCCATTGTaGACTTCGATGGGTTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KCVQLFLRLMLNALHTNQFPSPL*TSMGFP Trigger: TGGGAAACCCATCGAAGTCAACAATGGACTTGGGAA...TTGGTTGGTATGGAGAGCATTAAGCATAAGCCTTAAAAAGAGTTGCACACATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
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| CDS-3UTR CAA 90 bp | ATTACTGGAAGTATTTGTAGTTACAGAGTTACAGTAGCTGAAGAGCACATTATGTTGCATTTTGCAGCGTaGTGTGTCCATGGGAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: ITGSICSYRVTVAEEHIMLHFAA*CVHGKQ Trigger: CTGTTTCCCATGGACACACAACGCTGCAAAATGCAA...CATAATGTGCTCTTCAGCTACTGTAACTCTGTAACTACAAATACTTCCAGTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
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| CDS-3UTR CAA 90 bp | AGTAATCTGGACTCACATGTCACCACACTATTTAGGTTTGAAATGTGTGCAACTGAAGTACAAACTTTTTaGCATCTGGTCTCACCAACC | + |
|
Preference number: 5 (lower is better) Translates to: SNLDSHVTTLFRFEMCATEVQTF*HLVSPT Trigger: GGTTGGTGAGACCAGATGCAAAAAAGTTTGTACTTC...AGTTGCACACATTTCAAACCTAAATAGTGTGGTGACATGTGAGTCCAGATTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
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| CDS-3UTR CAA 90 bp | TCTCCATACCAACCAATGAAAGGCATGAAAATAGACTTTGATTTAAGGTGGATTAAGGAAATAATGCTCTaGCATAAAGGTCGATGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: SPYQPMKGMKIDFDLRWIKEIML*HKGRCA Trigger: AGCGCATCGACCTTTATGCAAGAGCATTATTTCCTT...AATCCACCTTAAATCAAAGTCTATTTTCATGCCTTTCATTGGTTGGTATGGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
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| CDS-3UTR CAA 90 bp | AAATGTGTGCAACTCTTTTTAAGGCTTATGCTTAATGCTCTCCATACCAACCAAGTCCATTGTTGTCTCTaGAATGGATCCAAAACTATT | + |
|
Preference number: 5 (lower is better) Translates to: KCVQLFLRLMLNALHTNQVHCCL*NGSKTI Trigger: AATAGTTTTGGATCCATTCAAGAGACAACAATGGAC...TTGGTTGGTATGGAGAGCATTAAGCATAAGCCTTAAAAAGAGTTGCACACATTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029654.15 |
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| CDS TCA 72 bp | GCTCGGCTGCGAGGGTGGTGCACTCTGAGGCCAAACTaGGCACGGAGAAGATGCCAGTGCCTTTATAGTATT | + |
|
Preference number: 6 (lower is better) Translates to: ARLRGWCTLRPN*ARRRCQCLYSI Trigger: AATACTATAAAGGCACTGGCATCTTCTCCGTGCTCAGTTTGGCCTCAGAGTGCACCACCCTCGCAGCCGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194085.6 |
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| CDS TCA 72 bp | AGGTGTGGAGGAGTTCTGAGAGCAGTTTTCGCACATTaGGTTGAGGATGGGCACAAGTACTGCTTCTTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: RCGGVLRAVFAH*VEDGHKYCFFF Trigger: GAAAAAGAAGCAGTACTTGTGCCCATCCTCAACTCAATGTGCGAAAACTGCTCTCAGAACTCCTCCACACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132330.2 |
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