Pregenerated sensors for GLRA4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018595Ensembl transcript IDs: ENSMUST00000018739.5
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGACATAGGCTGGGATCCTTTGAGTCCAGATTTGACATCCTCTTTTaGCAAAGCCACACTGAGCAGGACCTTCCCTGGCAAGGTCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: GHRLGSFESRFDILF*QSHTEQDLPWQGPE Trigger: CTCTGGACCTTGCCAGGGAAGGTCCTGCTCAGTGTGGCTTTGGCAAAAGAGGATGTCAAATCTGGACTCAAAGGATCCCAGCCTATGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018739.5 |
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| CDS TCA 90 bp | CCTCAGCCACTTGGACAGCAGGAGCATCTTCTAGCCACTCAAACATaGGGTCATTCATGGTGTAGCCAAAGCTTTCCAGCTGCATTGTAC | + |
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Preference number: 5 (lower is better) Translates to: PQPLGQQEHLLATQT*GHSWCSQSFPAALY Trigger: GTACAATGCAGCTGGAAAGCTTTGGCTACACCATGAATGACCTCATGTTTGAGTGGCTAGAAGATGCTCCTGCTGTCCAAGTGGCTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018739.5 |
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| CDS CCA 90 bp | CTCCTTCCTTTAGAAGAGGGGTTGGAGGTTGGGGACTATAAATGCTaGAACCTTCCATTGGACCTCCATCCCTTGCTTGTAAGCAGTGTC | + |
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Preference number: 5 (lower is better) Translates to: LLPLEEGLEVGDYKC*NLPLDLHPLLVSSV Trigger: GACACTGCTTACAAGCAAGGGATGGAGGTCCAATGGAAGGTTCCAGCATTTATAGTCCCCAACCTCCAACCCCTCTTCTAAAGGAAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018739.5 |
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| CDS TCA 90 bp | AGTGTCCTAGGCCATAGCCACGAAAATAGAAGCGGCTCTCTCTTATaGTGTCTTCTTCCATACGCTGACGTCTCTGCCTTCTACGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: SVLGHSHENRSGSLL*CLLPYADVSAFYEV Trigger: GACTTCGTAGAAGGCAGAGACGTCAGCGTATGGAAGAAGACATCATAAGAGAGAGCCGCTTCTATTTTCGTGGCTATGGCCTAGGACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018739.5 |
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| CDS CCA 90 bp | GTTCGTCCCATAAGCTTGTCCAAGAAATCAGAGGGGGACATAGGCTaGGATCCTTTGAGTCCAGATTTGACATCCTCTTTTGCCAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: VRPISLSKKSEGDIG*DPLSPDLTSSFAKA Trigger: GGCTTTGGCAAAAGAGGATGTCAAATCTGGACTCAAAGGATCCCAGCCTATGTCCCCCTCTGATTTCTTGGACAAGCTTATGGGACGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018739.5 |
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| CDS CCA 90 bp | TGCTTGGTACAATACCCTAGATCCTTCTCATCCCGCAAAATAAATTaGGGTAGAGTCAACCCCTCAGCCACTTGGACAGCAGGAGCATCT | + |
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Preference number: 5 (lower is better) Translates to: CLVQYPRSFSSRKIN*GRVNPSATWTAGAS Trigger: AGATGCTCCTGCTGTCCAAGTGGCTGAGGGGTTGACTCTACCCCAATTTATTTTGCGGGATGAGAAGGATCTAGGGTATTGTACCAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018739.5 |
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| CDS GCA 90 bp | TTTCTCCTTCCTTTAGAAGAGGGGTTGGAGGTTGGGGACTATAAATaGTGGAACCTTCCATTGGACCTCCATCCCTTGCTTGTAAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: FLLPLEEGLEVGDYK*WNLPLDLHPLLVSS Trigger: ACTGCTTACAAGCAAGGGATGGAGGTCCAATGGAAGGTTCCAGCATTTATAGTCCCCAACCTCCAACCCCTCTTCTAAAGGAAGGAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018739.5 |
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| CDS CCA 90 bp | AGATGGTGTCAATTCTCTTGGCTCGGTCCACATAGAGTTTCCTCATaGTTTCTCCTTCCTTTAGAAGAGGGGTTGGAGGTTGGGGACTAT | + |
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Preference number: 5 (lower is better) Translates to: RWCQFSWLGPHRVSS*FLLPLEEGLEVGDY Trigger: ATAGTCCCCAACCTCCAACCCCTCTTCTAAAGGAAGGAGAAACCATGAGGAAACTCTATGTGGACCGAGCCAAGAGAATTGACACCATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018739.5 |
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| CDS CAA 72 bp | GAGGGGGACATAGGCTGGGATCCTTTGAGTCCAGATTaGACATCCTCTTTTGCCAAAGCCACACTGAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: EGDIGWDPLSPD*TSSFAKATLSR Trigger: CCTGCTCAGTGTGGCTTTGGCAAAAGAGGATGTCAAATCTGGACTCAAAGGATCCCAGCCTATGTCCCCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018739.5 |
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| CDS CAA 90 bp | GAAGAGGGGTTGGAGGTTGGGGACTATAAATGCTGGAACCTTCCATaGGACCTCCATCCCTTGCTTGTAAGCAGTGTCCTAGGCCATAGC | + |
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Preference number: 6 (lower is better) Translates to: EEGLEVGDYKCWNLP*DLHPLLVSSVLGHS Trigger: GCTATGGCCTAGGACACTGCTTACAAGCAAGGGATGGAGGTCCAATGGAAGGTTCCAGCATTTATAGTCCCCAACCTCCAACCCCTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018739.5 |
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| CDS TCA 72 bp | GGCCATAGCCACGAAAATAGAAGCGGCTCTCTCTTATaGTGTCTTCTTCCATACGCTGACGTCTCTGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: GHSHENRSGSLL*CLLPYADVSAF Trigger: GAAGGCAGAGACGTCAGCGTATGGAAGAAGACATCATAAGAGAGAGCCGCTTCTATTTTCGTGGCTATGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018739.5 |
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| CDS GCA 72 bp | CCTTTAGAAGAGGGGTTGGAGGTTGGGGACTATAAATaGTGGAACCTTCCATTGGACCTCCATCCCTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: PLEEGLEVGDYK*WNLPLDLHPLL Trigger: AAGCAAGGGATGGAGGTCCAATGGAAGGTTCCAGCATTTATAGTCCCCAACCTCCAACCCCTCTTCTAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018739.5 |
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| CDS CCA 72 bp | AAGGGAAGACAGCCCTGGAGATGGTGTCAATTCTCTTaGCTCGGTCCACATAGAGTTTCCTCATGGTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: KGRQPWRWCQFS*LGPHRVSSWFL Trigger: GAGAAACCATGAGGAAACTCTATGTGGACCGAGCCAAGAGAATTGACACCATCTCCAGGGCTGTCTTCCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018739.5 |
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| CDS CAA 90 bp | GTTGGGGACTATAAATGCTGGAACCTTCCATTGGACCTCCATCCCTaGCTTGTAAGCAGTGTCCTAGGCCATAGCCACGAAAATAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: VGDYKCWNLPLDLHP*LVSSVLGHSHENRS Trigger: GCTTCTATTTTCGTGGCTATGGCCTAGGACACTGCTTACAAGCAAGGGATGGAGGTCCAATGGAAGGTTCCAGCATTTATAGTCCCCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018739.5 |
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| CDS CCA 72 bp | CAATACCCTAGATCCTTCTCATCCCGCAAAATAAATTaGGGTAGAGTCAACCCCTCAGCCACTTGGACAGCA | + |
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Preference number: 6 (lower is better) Translates to: QYPRSFSSRKIN*GRVNPSATWTA Trigger: TGCTGTCCAAGTGGCTGAGGGGTTGACTCTACCCCAATTTATTTTGCGGGATGAGAAGGATCTAGGGTATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018739.5 |
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| CDS CCA 72 bp | TTAGAAGAGGGGTTGGAGGTTGGGGACTATAAATGCTaGAACCTTCCATTGGACCTCCATCCCTTGCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: LEEGLEVGDYKC*NLPLDLHPLLV Trigger: TACAAGCAAGGGATGGAGGTCCAATGGAAGGTTCCAGCATTTATAGTCCCCAACCTCCAACCCCTCTTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018739.5 |
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| CDS CAA 72 bp | TATAAATGCTGGAACCTTCCATTGGACCTCCATCCCTaGCTTGTAAGCAGTGTCCTAGGCCATAGCCACGAA | + |
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Preference number: 6 (lower is better) Translates to: YKCWNLPLDLHP*LVSSVLGHSHE Trigger: TTCGTGGCTATGGCCTAGGACACTGCTTACAAGCAAGGGATGGAGGTCCAATGGAAGGTTCCAGCATTTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018739.5 |
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| CDS CAA 72 bp | TTGGAGGTTGGGGACTATAAATGCTGGAACCTTCCATaGGACCTCCATCCCTTGCTTGTAAGCAGTGTCCTA | + |
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Preference number: 6 (lower is better) Translates to: LEVGDYKCWNLP*DLHPLLVSSVL Trigger: TAGGACACTGCTTACAAGCAAGGGATGGAGGTCCAATGGAAGGTTCCAGCATTTATAGTCCCCAACCTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018739.5 |
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| CDS CAA 90 bp | ATAAGCTTGTCCAAGAAATCAGAGGGGGACATAGGCTGGGATCCTTaGAGTCCAGATTTGACATCCTCTTTTGCCAAAGCCACACTGAGC | + |
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Preference number: 6 (lower is better) Translates to: ISLSKKSEGDIGWDP*SPDLTSSFAKATLS Trigger: GCTCAGTGTGGCTTTGGCAAAAGAGGATGTCAAATCTGGACTCAAAGGATCCCAGCCTATGTCCCCCTCTGATTTCTTGGACAAGCTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018739.5 |
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| CDS CAA 90 bp | CCACATAGAGTTTCCTCATGGTTTCTCCTTCCTTTAGAAGAGGGGTaGGAGGTTGGGGACTATAAATGCTGGAACCTTCCATTGGACCTC | + |
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Preference number: 6 (lower is better) Translates to: PHRVSSWFLLPLEEG*EVGDYKCWNLPLDL Trigger: GAGGTCCAATGGAAGGTTCCAGCATTTATAGTCCCCAACCTCCAACCCCTCTTCTAAAGGAAGGAGAAACCATGAGGAAACTCTATGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018739.5 |
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| CDS CCA 72 bp | CAATTCTCTTGGCTCGGTCCACATAGAGTTTCCTCATaGTTTCTCCTTCCTTTAGAAGAGGGGTTGGAGGTT | + |
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Preference number: 6 (lower is better) Translates to: QFSWLGPHRVSS*FLLPLEEGLEV Trigger: AACCTCCAACCCCTCTTCTAAAGGAAGGAGAAACCATGAGGAAACTCTATGTGGACCGAGCCAAGAGAATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018739.5 |
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| CDS CAA 72 bp | GTTTCCTCATGGTTTCTCCTTCCTTTAGAAGAGGGGTaGGAGGTTGGGGACTATAAATGCTGGAACCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: VSSWFLLPLEEG*EVGDYKCWNLP Trigger: TGGAAGGTTCCAGCATTTATAGTCCCCAACCTCCAACCCCTCTTCTAAAGGAAGGAGAAACCATGAGGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018739.5 |
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| CDS CCA 72 bp | ATAAGCTTGTCCAAGAAATCAGAGGGGGACATAGGCTaGGATCCTTTGAGTCCAGATTTGACATCCTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: ISLSKKSEGDIG*DPLSPDLTSSF Trigger: AAAAGAGGATGTCAAATCTGGACTCAAAGGATCCCAGCCTATGTCCCCCTCTGATTTCTTGGACAAGCTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018739.5 |
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| CDS TCA 72 bp | CTCTGCCTTCTACGAAGTCTCATAAATTCCTTATGCTaGCGAGAGACAAAATTGACTGCAGCATACTCAAGC | + |
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Preference number: 6 (lower is better) Translates to: LCLLRSLINSLC*RETKLTAAYSS Trigger: GCTTGAGTATGCTGCAGTCAATTTTGTCTCTCGTCAGCATAAGGAATTTATGAGACTTCGTAGAAGGCAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018739.5 |
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