Pregenerated sensors for GLRA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038257Ensembl transcript IDs: ENSMUST00000000275.10, ENSMUST00000239388.2
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TATCTCATTAGTTTATTAAAGAGGGCATGTTCTTTCAAGCCCTCTTaGCTCAACCAGCCCTGTTTGCTTTGTAATGGCTGCCTTGTGAGA | + |
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Preference number: 1 (lower is better) Translates to: YLISLLKRACSFKPS*LNQPCLLCNGCLVR Trigger: TCTCACAAGGCAGCCATTACAAAGCAAACAGGGCTGGTTGAGTCAAGAGGGCTTGAAAGAACATGCCCTCTTTAATAAACTAATGAGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| 3UTR CCA 90 bp | GCAGAACATTTTAATACATTTGAATCACAATGTCATGAAAAACTGTaGCACCCATCTGGACAGAAAGGGAGACTCAGATATCCTCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: AEHFNTFESQCHEKL*HPSGQKGRLRYPPQ Trigger: CTGAGGAGGATATCTGAGTCTCCCTTTCTGTCCAGATGGGTGCCACAGTTTTTCATGACATTGTGATTCAAATGTATTAAAATGTTCTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| 3UTR TCA 90 bp | CAAACTCTGGATCCAACCCTCAGTACTACGGATCTAAATCTCACTTaGCACAGGTATTTTGATGTAAATACCTCAGGACGTTGTTATATT | + |
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Preference number: 1 (lower is better) Translates to: QTLDPTLSTTDLNLT*HRYFDVNTSGRCYI Trigger: AATATAACAACGTCCTGAGGTATTTACATCAAAATACCTGTGTCAAGTGAGATTTAGATCCGTAGTACTGAGGGTTGGATCCAGAGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| 3UTR CCA 90 bp | ATTATTCAAACAAGTCCAAGTACAGTTTTACATCTGAATCCTTTTTaGCGTTCATTTCAGAGTCCCTATCCCTCAAGAACATTAACAAGC | + |
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Preference number: 1 (lower is better) Translates to: IIQTSPSTVLHLNPF*RSFQSPYPSRTLTS Trigger: GCTTGTTAATGTTCTTGAGGGATAGGGACTCTGAAATGAACGCCAAAAAGGATTCAGATGTAAAACTGTACTTGGACTTGTTTGAATAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| 3UTR CCA 90 bp | GAATTAAAATCCATCCTCCTACAATTTGGAGACATTTTGGGCTCATaGATTACTCTGATGAGAAGAAACTTCAATGAGAGAAATGATTCT | + |
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Preference number: 1 (lower is better) Translates to: ELKSILLQFGDILGS*ITLMRRNFNERNDS Trigger: AGAATCATTTCTCTCATTGAAGTTTCTTCTCATCAGAGTAATCCATGAGCCCAAAATGTCTCCAAATTGTAGGAGGATGGATTTTAATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| 3UTR-3UTR GCA 90 bp | ATGGTAAGTATTCATGATACTCTGAGTAGCAGAGCTGAGAGATGGTTAGATCTTTCAACCAGCCCTGTTTaGTTTGTAATGGCTGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: MVSIHDTLSSRAERWLDLSTSPV*FVMAAL Trigger: CAAGGCAGCCATTACAAAGCAAACAGGGCTGGTTGA...AAGATCTAACCATCTCTCAGCTCTGCTACTCAGAGTATCATGAATACTTACCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| 3UTR CAA 90 bp | TGGCGTTCATTTCAGAGTCCCTATCCCTCAAGAACATTAACAAGCTaGGCTAGAGACTGTGTGGAAATGCTGTTCTCCAAAGATAATTTT | + |
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Preference number: 2 (lower is better) Translates to: WRSFQSPYPSRTLTS*ARDCVEMLFSKDNF Trigger: AAAATTATCTTTGGAGAACAGCATTTCCACACAGTCTCTAGCCAAGCTTGTTAATGTTCTTGAGGGATAGGGACTCTGAAATGAACGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| 3UTR-3UTR TCA 90 bp | ATGGTAAGTATTCATGATACTCTGAGTAGCAGAGCTGAGAGATGGTTAGATCTTTGGCAGTTTCTGCTTTaGGTTTTGGGAGTCGTTGAA | + |
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Preference number: 2 (lower is better) Translates to: MVSIHDTLSSRAERWLDLWQFLL*VLGVVE Trigger: TTCAACGACTCCCAAAACTCAAAGCAGAAACTGCCA...AAGATCTAACCATCTCTCAGCTCTGCTACTCAGAGTATCATGAATACTTACCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| 3UTR CAA 90 bp | TTGGTTCTACACTGTTCTATGGATAGTGTTCTAGCAGGAGTGACCTaGACATTTAATGATCTGGTTACCTTCCTTCGTCAATATGCTGTA | + |
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Preference number: 2 (lower is better) Translates to: LVLHCSMDSVLAGVT*TFNDLVTFLRQYAV Trigger: TACAGCATATTGACGAAGGAAGGTAACCAGATCATTAAATGTCAAGGTCACTCCTGCTAGAACACTATCCATAGAACAGTGTAGAACCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| 3UTR-3UTR TCA 90 bp | ATGGTAAGTATTCATGATACTCTGAGTAGCAGAGCTGAGAGATGGTTAGATCTTAGTTTTGGGAGTCGTTaGAGGTCAGAAAATAGTACC | + |
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Preference number: 2 (lower is better) Translates to: MVSIHDTLSSRAERWLDLSFGSR*RSENST Trigger: GGTACTATTTTCTGACCTTCAACGACTCCCAAAACT...AAGATCTAACCATCTCTCAGCTCTGCTACTCAGAGTATCATGAATACTTACCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| 3UTR-3UTR GCA 90 bp | AATATGGTAAGTATTCATGATACTCTGAGTAGCAGAGCTGAGAGATGGTTAGATGCCACCCCCAGTAGTTaGAATATGGCTAGTTTTGAA | + |
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Preference number: 2 (lower is better) Translates to: NMVSIHDTLSSRAERWLDATPSS*NMASFE Trigger: TTCAAAACTAGCCATATTGCAACTACTGGGGGTGGC...ATCTAACCATCTCTCAGCTCTGCTACTCAGAGTATCATGAATACTTACCATATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| 3UTR-3UTR GCA 90 bp | ATGGTAAGTATTCATGATACTCTGAGTAGCAGAGCTGAGAGATGGTTAGATCTTTTAAATGGCAGTTTCTaGTTTGAGTTTTGGGAGTCG | + |
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Preference number: 2 (lower is better) Translates to: MVSIHDTLSSRAERWLDLLNGSF*FEFWES Trigger: CGACTCCCAAAACTCAAAGCAGAAACTGCCATTTAA...AAGATCTAACCATCTCTCAGCTCTGCTACTCAGAGTATCATGAATACTTACCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| 3UTR-3UTR CCA 90 bp | AATATGGTAAGTATTCATGATACTCTGAGTAGCAGAGCTGAGAGATGGTTAGATCTTCGTTATGGGTGTTaGTTCTACACTGTTCTATGG | + |
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Preference number: 2 (lower is better) Translates to: NMVSIHDTLSSRAERWLDLRYGC*FYTVLW Trigger: CCATAGAACAGTGTAGAACCAACACCCATAACGAAG...ATCTAACCATCTCTCAGCTCTGCTACTCAGAGTATCATGAATACTTACCATATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| 3UTR-3UTR CCA 90 bp | AATATGGTAAGTATTCATGATACTCTGAGTAGCAGAGCTGAGAGATGGTTAGATCATCCTCCTACAATTTaGAGACATTTTGGGCTCATG | + |
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Preference number: 2 (lower is better) Translates to: NMVSIHDTLSSRAERWLDHPPTI*RHFGLM Trigger: CATGAGCCCAAAATGTCTCCAAATTGTAGGAGGATG...ATCTAACCATCTCTCAGCTCTGCTACTCAGAGTATCATGAATACTTACCATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| 3UTR-3UTR CCA 90 bp | AATATGGTAAGTATTCATGATACTCTGAGTAGCAGAGCTGAGAGATGGTTAGATTTGGGACTCGGGCTGTaGTTTAATAGTAATCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: NMVSIHDTLSSRAERWLDLGLGL*FNSNLF Trigger: GAAGAGATTACTATTAAACCACAGCCCGAGTCCCAA...ATCTAACCATCTCTCAGCTCTGCTACTCAGAGTATCATGAATACTTACCATATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| 3UTR-3UTR TCA 90 bp | ATGGTAAGTATTCATGATACTCTGAGTAGCAGAGCTGAGAGATGGTTAGATCTTTCAGAGTGTTTCCACTaGAACTCCAAATTAAATGAG | + |
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Preference number: 2 (lower is better) Translates to: MVSIHDTLSSRAERWLDLSECFH*NSKLNE Trigger: CTCATTTAATTTGGAGTTTCAGTGGAAACACTCTGA...AAGATCTAACCATCTCTCAGCTCTGCTACTCAGAGTATCATGAATACTTACCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| 3UTR-3UTR CCA 90 bp | AATATGGTAAGTATTCATGATACTCTGAGTAGCAGAGCTGAGAGATGGTTAGATGACATTTTGGGCTCATaGATTACTCTGATGAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: NMVSIHDTLSSRAERWLDDILGS*ITLMRR Trigger: TCTTCTCATCAGAGTAATCCATGAGCCCAAAATGTC...ATCTAACCATCTCTCAGCTCTGCTACTCAGAGTATCATGAATACTTACCATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| 3UTR-3UTR CCA 90 bp | ATGGTAAGTATTCATGATACTCTGAGTAGCAGAGCTGAGAGATGGTTAGATCTTGTTTTAATTTTAGTTTaGGACTCGGGCTGTGGTTTA | + |
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Preference number: 2 (lower is better) Translates to: MVSIHDTLSSRAERWLDLVLILV*DSGCGL Trigger: TAAACCACAGCCCGAGTCCCAAACTAAAATTAAAAC...AAGATCTAACCATCTCTCAGCTCTGCTACTCAGAGTATCATGAATACTTACCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| 3UTR-3UTR TCA 90 bp | CTCTATGTGCTAGTAAAATATATGCAACACACATTCACACTAGGAAGACAACAAAGGGAATCTTTCTTCTaGATGCTCTGTTTCTGTATG | + |
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Preference number: 2 (lower is better) Translates to: LYVLVKYMQHTFTLGRQQRESFF*MLCFCM Trigger: CATACAGAAACAGAGCATTCAGAAGAAAGATTCCCT...TTGTTGTCTTCCTAGTGTGAATGTGTGTTGCATATATTTTACTAGCACATAGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| 3UTR TCA 72 bp | AGTTTATTAAAGAGGGCATGTTCTTTCAAGCCCTCTTaGCTCAACCAGCCCTGTTTGCTTTGTAATGGCTGC | + |
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Preference number: 3 (lower is better) Translates to: SLLKRACSFKPS*LNQPCLLCNGC Trigger: GCAGCCATTACAAAGCAAACAGGGCTGGTTGAGTCAAGAGGGCTTGAAAGAACATGCCCTCTTTAATAAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| 3UTR TCA 72 bp | GATCCAACCCTCAGTACTACGGATCTAAATCTCACTTaGCACAGGTATTTTGATGTAAATACCTCAGGACGT | + |
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Preference number: 3 (lower is better) Translates to: DPTLSTTDLNLT*HRYFDVNTSGR Trigger: ACGTCCTGAGGTATTTACATCAAAATACCTGTGTCAAGTGAGATTTAGATCCGTAGTACTGAGGGTTGGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| 3UTR-3UTR CAA 90 bp | ATGGTAAGTATTCATGATACTCTGAGTAGCAGAGCTGAGAGATGGTTAGATCTTTCTTCGTTATGGGTGTaGGTTCTACACTGTTCTATG | + |
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Preference number: 3 (lower is better) Translates to: MVSIHDTLSSRAERWLDLSSLWV*VLHCSM Trigger: CATAGAACAGTGTAGAACCAACACCCATAACGAAGA...AAGATCTAACCATCTCTCAGCTCTGCTACTCAGAGTATCATGAATACTTACCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| 3UTR CCA 72 bp | TCCATCCTCCTACAATTTGGAGACATTTTGGGCTCATaGATTACTCTGATGAGAAGAAACTTCAATGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: SILLQFGDILGS*ITLMRRNFNER Trigger: TCTCTCATTGAAGTTTCTTCTCATCAGAGTAATCCATGAGCCCAAAATGTCTCCAAATTGTAGGAGGATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| 3UTR CCA 72 bp | TTGAAGGGATATAATTCATCATTACTTCAAACCCTCTaGCTACCTCTCAGCATAAGCAGCATATCTTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: LKGYNSSLLQTL*LPLSISSISCS Trigger: AGAGCAAGATATGCTGCTTATGCTGAGAGGTAGCCAGAGGGTTTGAAGTAATGATGAATTATATCCCTTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| 3UTR-3UTR CAA 90 bp | AATATGGTAAGTATTCATGATACTCTGAGTAGCAGAGCTGAGAGATGGTTAGATGGTTTTAATTTTAGTTaGGGACTCGGGCTGTGGTTT | + |
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Preference number: 3 (lower is better) Translates to: NMVSIHDTLSSRAERWLDGFNFS*GLGLWF Trigger: AAACCACAGCCCGAGTCCCAAACTAAAATTAAAACC...ATCTAACCATCTCTCAGCTCTGCTACTCAGAGTATCATGAATACTTACCATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| 3UTR CCA 72 bp | ATGGCTTTCATTTTGCCGATCCAATTTTCTTCGTTATaGGTGTTGGTTCTACACTGTTCTATGGATAGTGTT | + |
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Preference number: 3 (lower is better) Translates to: MAFILPIQFSSL*VLVLHCSMDSV Trigger: AACACTATCCATAGAACAGTGTAGAACCAACACCCATAACGAAGAAAATTGGATCGGCAAAATGAAAGCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| 3UTR-3UTR CAA 90 bp | ATGGTAAGTATTCATGATACTCTGAGTAGCAGAGCTGAGAGATGGTTAGATCTTGCAATATGGCTAGTTTaGAATACTTCAGAGTGTTTC | + |
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Preference number: 3 (lower is better) Translates to: MVSIHDTLSSRAERWLDLAIWLV*NTSECF Trigger: GAAACACTCTGAAGTATTCAAAACTAGCCATATTGC...AAGATCTAACCATCTCTCAGCTCTGCTACTCAGAGTATCATGAATACTTACCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| 3UTR CCA 72 bp | AAATCACTTAGAATTAAAATCCATCCTCCTACAATTTaGAGACATTTTGGGCTCATGGATTACTCTGATGAG | + |
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Preference number: 3 (lower is better) Translates to: KSLRIKIHPPTI*RHFGLMDYSDE Trigger: CTCATCAGAGTAATCCATGAGCCCAAAATGTCTCCAAATTGTAGGAGGATGGATTTTAATTCTAAGTGATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| 3UTR TCA 72 bp | AAATTATTCAAACAAGTCCAAGTACAGTTTTACATCTaGATCCTTTTTGGCGTTCATTTCAGAGTCCCTATC | + |
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Preference number: 3 (lower is better) Translates to: KLFKQVQVQFYI*ILFGVHFRVPI Trigger: GATAGGGACTCTGAAATGAACGCCAAAAAGGATTCAGATGTAAAACTGTACTTGGACTTGTTTGAATAATTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS-3UTR TCA 90 bp | CAAAGGAGAACAAGTATATCCAATTTTCAAGTGGGTAGTTCAGGCAGAGGGAGTCAGGGCTCTTTGGCATaGCCTGGACAGCGTGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: QRRTSISNFQVGSSGRGSQGSLA*PGQRGW Trigger: CCAACCACGCTGTCCAGGTCATGCCAAAGAGCCCTG...ACTCCCTCTGCCTGAACTACCCACTTGAAAATTGGATATACTTGTTCTCCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS-3UTR CCA 90 bp | CAAAGGAGAACAAGTATATCCAATTTTCAAGTGGGTAGTTCAGGCAGAGGGAGTGAACCACACCATCCTTaGCTTGCAGACAGGGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: QRRTSISNFQVGSSGRGSEPHHP*LADRAP Trigger: TGGGGCCCTGTCTGCAAGCCAAGGATGGTGTGGTTC...ACTCCCTCTGCCTGAACTACCCACTTGAAAATTGGATATACTTGTTCTCCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS-3UTR CCA 90 bp | CAAAGGAGAACAAGTATATCCAATTTTCAAGTGGGTAGTTCAGGCAGAGGGAGTGTGGTTGGGGCCTTTTaGAACCACACCATCCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: QRRTSISNFQVGSSGRGSVVGAF*NHTILG Trigger: GCCAAGGATGGTGTGGTTCCAAAAGGCCCCAACCAC...ACTCCCTCTGCCTGAACTACCCACTTGAAAATTGGATATACTTGTTCTCCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS-3UTR CCA 90 bp | AATATGGTAAGTATTCATGATACTCTGAGTAGCAGAGCTGAGAGATGGTTAGATCTCTTTGGCATGACCTaGACAGCGTGGTTGGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: NMVSIHDTLSSRAERWLDLFGMT*TAWLGP Trigger: AGGCCCCAACCACGCTGTCCAGGTCATGCCAAAGAG...ATCTAACCATCTCTCAGCTCTGCTACTCAGAGTATCATGAATACTTACCATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS-3UTR GCA 90 bp | CAAAGGAGAACAAGTATATCCAATTTTCAAGTGGGTAGTTCAGGCAGAGGGAGTGTTGGGTCTGATTCTTaGATCATACCCCGATGTCCT | + |
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Preference number: 4 (lower is better) Translates to: QRRTSISNFQVGSSGRGSVGSDS*IIPRCP Trigger: AGGACATCGGGGTATGATGCAAGAATCAGACCCAAC...ACTCCCTCTGCCTGAACTACCCACTTGAAAATTGGATATACTTGTTCTCCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS-3UTR CCA 90 bp | CAAAGGAGAACAAGTATATCCAATTTTCAAGTGGGTAGTTCAGGCAGAGGGAGTTTCAGCCACTTGTACTaGGGCTTCATCTTGCCATTC | + |
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Preference number: 4 (lower is better) Translates to: QRRTSISNFQVGSSGRGSFSHLY*GFILPF Trigger: GAATGGCAAGATGAAGCCCCAGTACAAGTGGCTGAA...ACTCCCTCTGCCTGAACTACCCACTTGAAAATTGGATATACTTGTTCTCCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS-3UTR CCA 90 bp | ATGGTAAGTATTCATGATACTCTGAGTAGCAGAGCTGAGAGATGGTTAGATCTTTCTGTGGTGACTTCGTaGAAGTTAGCCCCCTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: MVSIHDTLSSRAERWLDLSVVTS*KLAPFS Trigger: TGAGAAGGGGGCTAACTTCCACGAAGTCACCACAGA...AAGATCTAACCATCTCTCAGCTCTGCTACTCAGAGTATCATGAATACTTACCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS-3UTR CCA 90 bp | AATATGGTAAGTATTCATGATACTCTGAGTAGCAGAGCTGAGAGATGGTTAGATTTCATCAGGGCTCTTTaGCATGACCTGGACAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: NMVSIHDTLSSRAERWLDFIRAL*HDLDSV Trigger: CACGCTGTCCAGGTCATGCCAAAGAGCCCTGATGAA...ATCTAACCATCTCTCAGCTCTGCTACTCAGAGTATCATGAATACTTACCATATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| 3UTR CAA 72 bp | CACTGTTCTATGGATAGTGTTCTAGCAGGAGTGACCTaGACATTTAATGATCTGGTTACCTTCCTTCGTCAA | + |
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Preference number: 4 (lower is better) Translates to: HCSMDSVLAGVT*TFNDLVTFLRQ Trigger: TTGACGAAGGAAGGTAACCAGATCATTAAATGTCAAGGTCACTCCTGCTAGAACACTATCCATAGAACAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS-3UTR TCA 90 bp | ACACAGGAAATCAAAATAAACTCTTTCCCTATATGCTTATACCCACACGCACACCAGAAAATCAGAAGGTaGCATTGGAGCACTTCGAGA | + |
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Preference number: 4 (lower is better) Translates to: TQEIKINSFPICLYPHAHQKIRR*HWSTSR Trigger: TCTCGAAGTGCTCCAATGTCACCTTCTGATTTTCTG...GTGTGCGTGTGGGTATAAGCATATAGGGAAAGAGTTTATTTTGATTTCCTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS-3UTR TCA 90 bp | ACACAGGAAATCAAAATAAACTCTTTCCCTATATGCTTATACCCACACGCACACCCATTGGGAAATTCTTaGGATCCATTGGACAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: TQEIKINSFPICLYPHAHPLGNS*DPLDRR Trigger: TCTCCTGTCCAATGGATCTCAAGAATTTCCCAATGG...GTGTGCGTGTGGGTATAAGCATATAGGGAAAGAGTTTATTTTGATTTCCTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS-3UTR TCA 90 bp | CTCTATGTGCTAGTAAAATATATGCAACACACATTCACACTAGGAAGACAACAACTCCTTGTGTTGCCTTaGGACAAAATTCACGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LYVLVKYMQHTFTLGRQQLLVLP*DKIHGC Trigger: GCAGCCGTGAATTTTGTCTCAAGGCAACACAAGGAG...TTGTTGTCTTCCTAGTGTGAATGTGTGTTGCATATATTTTACTAGCACATAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS-3UTR TCA 90 bp | CAAAGGAGAACAAGTATATCCAATTTTCAAGTGGGTAGTTCAGGCAGAGGGAGTGGATCATTCCACTTCTaGCGAAGAAAAATGTTTACT | + |
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Preference number: 4 (lower is better) Translates to: QRRTSISNFQVGSSGRGSGSFHF*RRKMFT Trigger: AGTAAACATTTTTCTTCGTCAGAAGTGGAATGATCC...ACTCCCTCTGCCTGAACTACCCACTTGAAAATTGGATATACTTGTTCTCCTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS-3UTR GCA 90 bp | ATGGTAAGTATTCATGATACTCTGAGTAGCAGAGCTGAGAGATGGTTAGATCTTACTGGGGCTTCATCTTaGCATTCAAAAATGAGATCA | + |
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Preference number: 4 (lower is better) Translates to: MVSIHDTLSSRAERWLDLTGASS*HSKMRS Trigger: TGATCTCATTTTTGAATGGCAAGATGAAGCCCCAGT...AAGATCTAACCATCTCTCAGCTCTGCTACTCAGAGTATCATGAATACTTACCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS-3UTR CCA 90 bp | CTCTATGTGCTAGTAAAATATATGCAACACACATTCACACTAGGAAGACAACAAGCATGTGACATTAACTaGAGGACCTTTGAAGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: LYVLVKYMQHTFTLGRQQACDIN*RTFEVG Trigger: CCCAACTTCAAAGGTCCTCCAGTTAATGTCACATGC...TTGTTGTCTTCCTAGTGTGAATGTGTGTTGCATATATTTTACTAGCACATAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS-3UTR TCA 90 bp | ACACAGGAAATCAAAATAAACTCTTTCCCTATATGCTTATACCCACACGCACACCTTGCCATTCAAAAATaGGATCATTCATTGTGTACC | + |
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Preference number: 4 (lower is better) Translates to: TQEIKINSFPICLYPHAHLAIQK*DHSLCT Trigger: GGTACACAATGAATGATCTCATTTTTGAATGGCAAG...GTGTGCGTGTGGGTATAAGCATATAGGGAAAGAGTTTATTTTGATTTCCTGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS-3UTR GCA 90 bp | AATATGGTAAGTATTCATGATACTCTGAGTAGCAGAGCTGAGAGATGGTTAGATAGGATATTCACTGTATaGAAGACGAGGATCATTCCA | + |
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Preference number: 4 (lower is better) Translates to: NMVSIHDTLSSRAERWLDRIFTV*KTRIIP Trigger: TGGAATGATCCTCGTCTTGCATACAGTGAATATCCT...ATCTAACCATCTCTCAGCTCTGCTACTCAGAGTATCATGAATACTTACCATATT 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| 3UTR CAA 72 bp | GAATTAAAATCCATCCTCCTACAATTTGGAGACATTTaGGGCTCATGGATTACTCTGATGAGAAGAAACTTC | + |
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Preference number: 4 (lower is better) Translates to: ELKSILLQFGDI*GSWITLMRRNF Trigger: GAAGTTTCTTCTCATCAGAGTAATCCATGAGCCCAAAATGTCTCCAAATTGTAGGAGGATGGATTTTAATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS-3UTR CCA 90 bp | ATGGTAAGTATTCATGATACTCTGAGTAGCAGAGCTGAGAGATGGTTAGATCTTTGTTTGTACATCCATTaGGAAATTCTTGAGATCCAT | + |
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Preference number: 4 (lower is better) Translates to: MVSIHDTLSSRAERWLDLCLYIH*EILEIH Trigger: ATGGATCTCAAGAATTTCCCAATGGATGTACAAACA...AAGATCTAACCATCTCTCAGCTCTGCTACTCAGAGTATCATGAATACTTACCAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS-3UTR GCA 90 bp | CTCTATGTGCTAGTAAAATATATGCAACACACATTCACACTAGGAAGACAACAACCAAAGCTTTCAAGTTaGATTATGCATGTTTGTACA | + |
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Preference number: 4 (lower is better) Translates to: LYVLVKYMQHTFTLGRQQPKLSS*IMHVCT Trigger: TGTACAAACATGCATAATGCAACTTGAAAGCTTTGG...TTGTTGTCTTCCTAGTGTGAATGTGTGTTGCATATATTTTACTAGCACATAGAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS-3UTR CAA 90 bp | ACACAGGAAATCAAAATAAACTCTTTCCCTATATGCTTATACCCACACGCACACGGAACCACACCATCCTaGGCTTGCAGACAGGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: TQEIKINSFPICLYPHAHGTTPS*ACRQGP Trigger: GGGGCCCTGTCTGCAAGCCAAGGATGGTGTGGTTCC...GTGTGCGTGTGGGTATAAGCATATAGGGAAAGAGTTTATTTTGATTTCCTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS-3UTR CAA 90 bp | ACACAGGAAATCAAAATAAACTCTTTCCCTATATGCTTATACCCACACGCACACCGTGGTTGGGGCCTTTaGGAACCACACCATCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: TQEIKINSFPICLYPHAHRGWGL*EPHHPW Trigger: CCAAGGATGGTGTGGTTCCAAAAGGCCCCAACCACG...GTGTGCGTGTGGGTATAAGCATATAGGGAAAGAGTTTATTTTGATTTCCTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS TCA 90 bp | AGTAAAATCCAGAAACTAGTGTCCGAAAGTGTCTCACGTGGGCCATaGTACGGAAAGAGATCCACGATCCTGAAAGCAGTCTTATCCAAG | + |
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Preference number: 5 (lower is better) Translates to: SKIQKLVSESVSRGP*YGKRSTILKAVLSK Trigger: CTTGGATAAGACTGCTTTCAGGATCGTGGATCTCTTTCCGTATCATGGCCCACGTGAGACACTTTCGGACACTAGTTTCTGGATTTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239388.2 |
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| CDS-3UTR CAA 90 bp | CAAAGGAGAACAAGTATATCCAATTTTCAAGTGGGTAGTTCAGGCAGAGGGAGTAACCTCAACAGCTCCTaGTGTTGCCTTGAGACAAAA | + |
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Preference number: 5 (lower is better) Translates to: QRRTSISNFQVGSSGRGSNLNSS*CCLETK Trigger: TTTTGTCTCAAGGCAACACAAGGAGCTGTTGAGGTT...ACTCCCTCTGCCTGAACTACCCACTTGAAAATTGGATATACTTGTTCTCCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS-3UTR CAA 90 bp | AATATGGTAAGTATTCATGATACTCTGAGTAGCAGAGCTGAGAGATGGTTAGATAATCAGAAGGTGACATaGGAGCACTTCGAGATCGCG | + |
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Preference number: 5 (lower is better) Translates to: NMVSIHDTLSSRAERWLDNQKVT*EHFEIA Trigger: CGCGATCTCGAAGTGCTCCAATGTCACCTTCTGATT...ATCTAACCATCTCTCAGCTCTGCTACTCAGAGTATCATGAATACTTACCATATT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS-3UTR CAA 90 bp | CAAAGGAGAACAAGTATATCCAATTTTCAAGTGGGTAGTTCAGGCAGAGGGAGTTTAACTGGAGGACCTTaGAAGTTGGGTCTGATTCTT | + |
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Preference number: 5 (lower is better) Translates to: QRRTSISNFQVGSSGRGSLTGGP*KLGLIL Trigger: AAGAATCAGACCCAACTTCAAAGGTCCTCCAGTTAA...ACTCCCTCTGCCTGAACTACCCACTTGAAAATTGGATATACTTGTTCTCCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS-3UTR CAA 90 bp | ACACAGGAAATCAAAATAAACTCTTTCCCTATATGCTTATACCCACACGCACACTCCATTGGGAAATTCTaGAGATCCATTGGACAGGAG | + |
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Preference number: 5 (lower is better) Translates to: TQEIKINSFPICLYPHAHSIGKF*RSIGQE Trigger: CTCCTGTCCAATGGATCTCAAGAATTTCCCAATGGA...GTGTGCGTGTGGGTATAAGCATATAGGGAAAGAGTTTATTTTGATTTCCTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS-3UTR CAA 90 bp | CTCTATGTGCTAGTAAAATATATGCAACACACATTCACACTAGGAAGACAACAAGCTCCTTGTGTTGCCTaGAGACAAAATTCACGGCTG | + |
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Preference number: 5 (lower is better) Translates to: LYVLVKYMQHTFTLGRQQAPCVA*RQNSRL Trigger: CAGCCGTGAATTTTGTCTCAAGGCAACACAAGGAGC...TTGTTGTCTTCCTAGTGTGAATGTGTGTTGCATATATTTTACTAGCACATAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS-3UTR CAA 90 bp | AATATGGTAAGTATTCATGATACTCTGAGTAGCAGAGCTGAGAGATGGTTAGATCACTGTTTGTTTCCTTaGTGGCCACCAAACTCAGTA | + |
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Preference number: 5 (lower is better) Translates to: NMVSIHDTLSSRAERWLDHCLFP*WPPNSV Trigger: TACTGAGTTTGGTGGCCACAAAGGAAACAAACAGTG...ATCTAACCATCTCTCAGCTCTGCTACTCAGAGTATCATGAATACTTACCATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS-3UTR CAA 90 bp | CTCTATGTGCTAGTAAAATATATGCAACACACATTCACACTAGGAAGACAACAAGGAGGACCTTTGAAGTaGGGTCTGATTCTTGCATCA | + |
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Preference number: 5 (lower is better) Translates to: LYVLVKYMQHTFTLGRQQGGPLK*GLILAS Trigger: TGATGCAAGAATCAGACCCAACTTCAAAGGTCCTCC...TTGTTGTCTTCCTAGTGTGAATGTGTGTTGCATATATTTTACTAGCACATAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS-3UTR CAA 90 bp | ATGGTAAGTATTCATGATACTCTGAGTAGCAGAGCTGAGAGATGGTTAGATCTTTACTGGGGCTTCATCTaGCCATTCAAAAATGAGATC | + |
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Preference number: 5 (lower is better) Translates to: MVSIHDTLSSRAERWLDLYWGFI*PFKNEI Trigger: GATCTCATTTTTGAATGGCAAGATGAAGCCCCAGTA...AAGATCTAACCATCTCTCAGCTCTGCTACTCAGAGTATCATGAATACTTACCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS-3UTR CAA 90 bp | AATATGGTAAGTATTCATGATACTCTGAGTAGCAGAGCTGAGAGATGGTTAGATCCCAAAGCTTTCAAGTaGCATTATGCATGTTTGTAC | + |
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Preference number: 5 (lower is better) Translates to: NMVSIHDTLSSRAERWLDPKAFK*HYACLY Trigger: GTACAAACATGCATAATGCAACTTGAAAGCTTTGGG...ATCTAACCATCTCTCAGCTCTGCTACTCAGAGTATCATGAATACTTACCATATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS-3UTR CAA 90 bp | AATATGGTAAGTATTCATGATACTCTGAGTAGCAGAGCTGAGAGATGGTTAGATTTCTTTCAACAGAAATaGAGGCAAAGTGAGTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: NMVSIHDTLSSRAERWLDFFQQK*RQSESF Trigger: GAAGGACTCACTTTGCCTCAATTTCTGTTGAAAGAA...ATCTAACCATCTCTCAGCTCTGCTACTCAGAGTATCATGAATACTTACCATATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000275.10 |
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| CDS CCA 72 bp | ACCTTCCTCATTTCATCAGGGCTCTTTGGCATGACCTaGACAGCGTGGTTGGGGCCTTTTGGAACCACACCA | + |
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Preference number: 6 (lower is better) Translates to: TFLISSGLFGMT*TAWLGPFGTTP Trigger: TGGTGTGGTTCCAAAAGGCCCCAACCACGCTGTCCAGGTCATGCCAAAGAGCCCTGATGAAATGAGGAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000275.10 ENSMUST00000239388.2 |
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| CDS CCA 72 bp | GAGCACTTCGAGATCGCGCACTGTTTGTTTCCTTTGTaGCCACCAAACTCAGTAACAGTGCGGCTTCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: EHFEIAHCLFPL*PPNSVTVRLPR Trigger: TCTGGGAAGCCGCACTGTTACTGAGTTTGGTGGCCACAAAGGAAACAAACAGTGCGCGATCTCGAAGTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000275.10 ENSMUST00000239388.2 |
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| CDS CAA 72 bp | TTGGAGCACTTCGAGATCGCGCACTGTTTGTTTCCTTaGTGGCCACCAAACTCAGTAACAGTGCGGCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: LEHFEIAHCLFP*WPPNSVTVRLP Trigger: GGGAAGCCGCACTGTTACTGAGTTTGGTGGCCACAAAGGAAACAAACAGTGCGCGATCTCGAAGTGCTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000275.10 ENSMUST00000239388.2 |
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| CDS CAA 90 bp | GAAAATCAGAAGGTGACATTGGAGCACTTCGAGATCGCGCACTGTTaGTTTCCTTTGTGGCCACCAAACTCAGTAACAGTGCGGCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: ENQKVTLEHFEIAHC*FPLWPPNSVTVRLP Trigger: GGGAAGCCGCACTGTTACTGAGTTTGGTGGCCACAAAGGAAACAAACAGTGCGCGATCTCGAAGTGCTCCAATGTCACCTTCTGATTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000275.10 ENSMUST00000239388.2 |
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| CDS TCA 72 bp | CAGAAACTAGTGTCCGAAAGTGTCTCACGTGGGCCATaGTACGGAAAGAGATCCACGATCCTGAAAGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: QKLVSESVSRGP*YGKRSTILKAV Trigger: GACTGCTTTCAGGATCGTGGATCTCTTTCCGTATCATGGCCCACGTGAGACACTTTCGGACACTAGTTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239388.2 |
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| CDS CAA 72 bp | CAACAGAAATTGAGGCAAAGTGAGTCCTTCAGCCACTaGTACTGGGGCTTCATCTTGCCATTCAAAAATGAG | + |
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Preference number: 6 (lower is better) Translates to: QQKLRQSESFSH*YWGFILPFKNE Trigger: CTCATTTTTGAATGGCAAGATGAAGCCCCAGTACAAGTGGCTGAAGGACTCACTTTGCCTCAATTTCTGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000275.10 ENSMUST00000239388.2 |
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