Pregenerated sensors for GLRA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018589Ensembl transcript IDs: ENSMUST00000058787.9
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTTACAGCTACAATGAGGGCAGAAATGGGAAGTTTGAGCTAATCTaGGCTACACCGGTCACAACACACCATCTCCATAAATACTGTGGC | + |
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Preference number: 1 (lower is better) Translates to: SYSYNEGRNGKFELI*ATPVTTHHLHKYCG Trigger: GCCACAGTATTTATGGAGATGGTGTGTTGTGACCGGTGTAGCTCAGATTAGCTCAAACTTCCCATTTCTGCCCTCATTGTAGCTGTAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| 3UTR TCA 90 bp | CTGGTACATAGAAAGAATTTACAACCCACAGAAGGATTTCTTGGGTaGAACACTAATTACAGACATTGTAAATGTCATAGCTCAGGAGGC | + |
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Preference number: 1 (lower is better) Translates to: LVHRKNLQPTEGFLG*NTNYRHCKCHSSGG Trigger: GCCTCCTGAGCTATGACATTTACAATGTCTGTAATTAGTGTTTCACCCAAGAAATCCTTCTGTGGGTTGTAAATTCTTTCTATGTACCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| 3UTR CCA 90 bp | AGGATATTTAAAACGATATTCACTTGGATTGAAAGTACAAATTACTaGTCAGTCAACATTAGGACTAGTAGTTACAGCTACAATGAGGGC | + |
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Preference number: 1 (lower is better) Translates to: RIFKTIFTWIESTNY*SVNIRTSSYSYNEG Trigger: GCCCTCATTGTAGCTGTAACTACTAGTCCTAATGTTGACTGACCAGTAATTTGTACTTTCAATCCAAGTGAATATCGTTTTAAATATCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| 3UTR-3UTR TCA 90 bp | CGCGTACTCGCGCGCATTAAACTAAACTTTCAGAACCAAATCTCATCAAGTCAAGAGCGATGCATCATCTaGAAGAACAATGCTATAGAC | + |
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Preference number: 2 (lower is better) Translates to: RVLARIKLNFQNQISSSQERCII*KNNAID Trigger: GTCTATAGCATTGTTCTTTCAGATGATGCATCGCTC...TTGACTTGATGAGATTTGGTTCTGAAAGTTTAGTTTAATGCGCGCGAGTACGCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| 3UTR-3UTR TCA 90 bp | TTCAAACCACGTAGCTCTGGTACCAAAAAGGCAACGGGTTATGAAAATCACAGTGAGGCAGCATTTTCCTaGAAAAGTTTGGTCCTCAAT | + |
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Preference number: 2 (lower is better) Translates to: FKPRSSGTKKATGYENHSEAAFS*KSLVLN Trigger: ATTGAGGACCAAACTTTTTCAGGAAAATGCTGCCTC...ACTGTGATTTTCATAACCCGTTGCCTTTTTGGTACCAGAGCTACGTGGTTTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| 3UTR-3UTR TCA 90 bp | CACGTAGCTCTGGTACCAAAAAGGCAACGGGTTATGAAAATCACAGTACAGTTTGGAGTTATGCTCATGTaGTTCTGCAACACCTTAATT | + |
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Preference number: 2 (lower is better) Translates to: HVALVPKRQRVMKITVQFGVMLM*FCNTLI Trigger: AATTAAGGTGTTGCAGAATCACATGAGCATAACTCC...AAACTGTACTGTGATTTTCATAACCCGTTGCCTTTTTGGTACCAGAGCTACGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| 3UTR-3UTR GCA 90 bp | CGCGTACTCGCGCGCATTAAACTAAACTTTCAGAACCAAATCTCATCAAGTCAATATGGATGGGAGTTATaGTCATGTGATTCTGCAACA | + |
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Preference number: 2 (lower is better) Translates to: RVLARIKLNFQNQISSSQYGWEL*SCDSAT Trigger: TGTTGCAGAATCACATGAGCATAACTCCCATCCATA...TTGACTTGATGAGATTTGGTTCTGAAAGTTTAGTTTAATGCGCGCGAGTACGCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| 3UTR-3UTR CCA 90 bp | TTCAAACCACGTAGCTCTGGTACCAAAAAGGCAACGGGTTATGAAAATCACAGTCAATGCTATAGACTATaGATGGGAGTTATGCTCATG | + |
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Preference number: 2 (lower is better) Translates to: FKPRSSGTKKATGYENHSQCYRL*MGVMLM Trigger: CATGAGCATAACTCCCATCCATAGTCTATAGCATTG...ACTGTGATTTTCATAACCCGTTGCCTTTTTGGTACCAGAGCTACGTGGTTTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| 3UTR-3UTR TCA 90 bp | TTCAAACCACGTAGCTCTGGTACCAAAAAGGCAACGGGTTATGAAAATCACAGTGAAGGATTTCTTGGGTaGAACACTAATTACAGACAT | + |
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Preference number: 2 (lower is better) Translates to: FKPRSSGTKKATGYENHSEGFLG*NTNYRH Trigger: ATGTCTGTAATTAGTGTTTCACCCAAGAAATCCTTC...ACTGTGATTTTCATAACCCGTTGCCTTTTTGGTACCAGAGCTACGTGGTTTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| 3UTR CAA 90 bp | GTTTTCTGGTACATAGAAAGAATTTACAACCCACAGAAGGATTTCTaGGGTGAAACACTAATTACAGACATTGTAAATGTCATAGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: VFWYIERIYNPQKDF*GETLITDIVNVIAQ Trigger: CTGAGCTATGACATTTACAATGTCTGTAATTAGTGTTTCACCCAAGAAATCCTTCTGTGGGTTGTAAATTCTTTCTATGTACCAGAAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| 3UTR TCA 72 bp | TTGACCTTGCACATCATGTCTGAGCGATGCATCATCTaGAAGAACAATGCTATAGACTATGGATGGGAGTTA | + |
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Preference number: 3 (lower is better) Translates to: LTLHIMSERCII*KNNAIDYGWEL Trigger: TAACTCCCATCCATAGTCTATAGCATTGTTCTTTCAGATGATGCATCGCTCAGACATGATGTGCAAGGTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| 3UTR-3UTR CAA 90 bp | CACGTAGCTCTGGTACCAAAAAGGCAACGGGTTATGAAAATCACAGTACAGTTTCAATGTTCTTCTCTGTaGAAGCGATATAAAGACACT | + |
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Preference number: 3 (lower is better) Translates to: HVALVPKRQRVMKITVQFQCSSL*KRYKDT Trigger: AGTGTCTTTATATCGCTTCAACAGAGAAGAACATTG...AAACTGTACTGTGATTTTCATAACCCGTTGCCTTTTTGGTACCAGAGCTACGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| 3UTR-3UTR CAA 90 bp | CGATATTCACTTGGATTGAAAGTACAAATTACTGGTCAGTCAACATTAGGACTAATTGAGAACTTGACCTaGCACATCATGTCTGAGCGA | + |
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Preference number: 3 (lower is better) Translates to: RYSLGLKVQITGQSTLGLIENLT*HIMSER Trigger: TCGCTCAGACATGATGTGCAAGGTCAAGTTCTCAAT...TAGTCCTAATGTTGACTGACCAGTAATTTGTACTTTCAATCCAAGTGAATATCG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| 3UTR TCA 72 bp | CAATGCTATAGACTATGGATGGGAGTTATGCTCATGTaGTTCTGCAACACCTTAATTTTGTGCAGTTTTCTT | + |
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Preference number: 3 (lower is better) Translates to: QCYRLWMGVMLM*FCNTLILCSFL Trigger: AAGAAAACTGCACAAAATTAAGGTGTTGCAGAATCACATGAGCATAACTCCCATCCATAGTCTATAGCATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| 3UTR TCA 72 bp | AGAAAGAATTTACAACCCACAGAAGGATTTCTTGGGTaGAACACTAATTACAGACATTGTAAATGTCATAGC | + |
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Preference number: 3 (lower is better) Translates to: RKNLQPTEGFLG*NTNYRHCKCHS Trigger: GCTATGACATTTACAATGTCTGTAATTAGTGTTTCACCCAAGAAATCCTTCTGTGGGTTGTAAATTCTTTCT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR TCA 90 bp | TTCAAACCACGTAGCTCTGGTACCAAAAAGGCAACGGGTTATGAAAATCACAGTTTGTCAGGACTGTTGTaGTGCCCAGGGCAACCCTGG | + |
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Preference number: 4 (lower is better) Translates to: FKPRSSGTKKATGYENHSLSGLL*CPGQPW Trigger: CCAGGGTTGCCCTGGGCATCACAACAGTCCTGACAA...ACTGTGATTTTCATAACCCGTTGCCTTTTTGGTACCAGAGCTACGTGGTTTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR CCA 90 bp | CACGTAGCTCTGGTACCAAAAAGGCAACGGGTTATGAAAATCACAGTACAGTTTCACATAGGAGACCTTTaGCAGAGATGCCCTGGAACC | + |
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Preference number: 4 (lower is better) Translates to: HVALVPKRQRVMKITVQFHIGDL*QRCPGT Trigger: GGTTCCAGGGCATCTCTGCCAAAGGTCTCCTATGTG...AAACTGTACTGTGATTTTCATAACCCGTTGCCTTTTTGGTACCAGAGCTACGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR TCA 90 bp | CACGTAGCTCTGGTACCAAAAAGGCAACGGGTTATGAAAATCACAGTACAGTTTACTGTATGCCAGCCGTaGATCATTCCACTGCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: HVALVPKRQRVMKITVQFTVCQP*IIPLLS Trigger: AGACAGCAGTGGAATGATTCACGGCTGGCATACAGT...AAACTGTACTGTGATTTTCATAACCCGTTGCCTTTTTGGTACCAGAGCTACGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR TCA 90 bp | CGCGTACTCGCGCGCATTAAACTAAACTTTCAGAACCAAATCTCATCAAGTCAAAGACCCAGGACAAAATaGCTATCAACAGGCTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: RVLARIKLNFQNQISSSQRPRTK*LSTGWG Trigger: TCCCCAGCCTGTTGATAGTCATTTTGTCCTGGGTCT...TTGACTTGATGAGATTTGGTTCTGAAAGTTTAGTTTAATGCGCGCGAGTACGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR GCA 90 bp | TTCAAACCACGTAGCTCTGGTACCAAAAAGGCAACGGGTTATGAAAATCACAGTGAAGGAGATAGGGTCTaGGAGGGATGTTTTCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: FKPRSSGTKKATGYENHSEGDRV*EGCFPD Trigger: GTCTGGAAAACATCCCTCGCAGACCCTATCTCCTTC...ACTGTGATTTTCATAACCCGTTGCCTTTTTGGTACCAGAGCTACGTGGTTTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR CCA 90 bp | GACACTATTACTGTGTATTTACAAGCACAACACTTAGGCAAGAAGGTCCAGGGTCCAGACCTGGAGTCATaGTCTTTGCAGAAAGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: DTITVYLQAQHLGKKVQGPDLES*SLQKAS Trigger: GGAAGCTTTCTGCAAAGACCATGACTCCAGGTCTGG...ACCCTGGACCTTCTTGCCTAAGTGTTGTGCTTGTAAATACACAGTAATAGTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR TCA 90 bp | AGACACTATTACTGTGTATTTACAAGCACAACACTTAGGCAAGAAGGTCCAGGGTGCAGAAAGCTTCCCTaGAGTGGTTTGTCCCTAAGA | + |
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Preference number: 4 (lower is better) Translates to: RHYYCVFTSTTLRQEGPGCRKLP*SGLSLR Trigger: TCTTAGGGACAAACCACTTCAGGGAAGCTTTCTGCA...CCCTGGACCTTCTTGCCTAAGTGTTGTGCTTGTAAATACACAGTAATAGTGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR GCA 90 bp | GACACTATTACTGTGTATTTACAAGCACAACACTTAGGCAAGAAGGTCCAGGGTCCAAAACTCTCCAGCTaGATTGTACAGGTCTGGACA | + |
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Preference number: 4 (lower is better) Translates to: DTITVYLQAQHLGKKVQGPKLSS*IVQVWT Trigger: TGTCCAGACCTGTACAATGCAGCTGGAGAGTTTTGG...ACCCTGGACCTTCTTGCCTAAGTGTTGTGCTTGTAAATACACAGTAATAGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR GCA 90 bp | CACGTAGCTCTGGTACCAAAAAGGCAACGGGTTATGAAAATCACAGTACAGTTTAACCCTGGCAGGGGCTaGATCCATGTTTATCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: HVALVPKRQRVMKITVQFNPGRG*IHVYPK Trigger: TTTTGGATAAACATGGATGCAGCCCCTGCCAGGGTT...AAACTGTACTGTGATTTTCATAACCCGTTGCCTTTTTGGTACCAGAGCTACGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR GCA 90 bp | TTCAAACCACGTAGCTCTGGTACCAAAAAGGCAACGGGTTATGAAAATCACAGTTCTTCTTCCTTATTCTaGCTCTTCTGTCGTCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: FKPRSSGTKKATGYENHSSSSLF*LFCRLR Trigger: CCGGAGACGACAGAAGAGGCAGAATAAGGAAGAAGA...ACTGTGATTTTCATAACCCGTTGCCTTTTTGGTACCAGAGCTACGTGGTTTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR TCA 90 bp | GACACTATTACTGTGTATTTACAAGCACAACACTTAGGCAAGAAGGTCCAGGGTACTTGTTGTCAGTGGTaGCATCATGGAAATTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: DTITVYLQAQHLGKKVQGTCCQW*HHGNWH Trigger: GTGCCAATTTCCATGATGTCACCACTGACAACAAGT...ACCCTGGACCTTCTTGCCTAAGTGTTGTGCTTGTAAATACACAGTAATAGTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR CCA 90 bp | CGCGTACTCGCGCGCATTAAACTAAACTTTCAGAACCAAATCTCATCAAGTCAAAGGCAGCTCGAGATATaGTGTCAATTCTTTTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: RVLARIKLNFQNQISSSQRQLEI*CQFFLP Trigger: GGGCAAAAAGAATTGACACCATATCTCGAGCTGCCT...TTGACTTGATGAGATTTGGTTCTGAAAGTTTAGTTTAATGCGCGCGAGTACGCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| 3UTR CAA 72 bp | TGTGCAGTTTTCTTAATTTCCCATAGAACCTGTCTTTaGTCATATAGGTGCCAGAAACCCCACCCTCGTGAT | + |
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Preference number: 4 (lower is better) Translates to: CAVFLISHRTCL*SYRCQKPHPRD Trigger: ATCACGAGGGTGGGGTTTCTGGCACCTATATGACAAAAGACAGGTTCTATGGGAAATTAAGAAAACTGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR GCA 90 bp | AGACACTATTACTGTGTATTTACAAGCACAACACTTAGGCAAGAAGGTCCAGGGAGGAACTCCTTATGTTaGCTGGAGACAAAGTTCACT | + |
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Preference number: 4 (lower is better) Translates to: RHYYCVFTSTTLRQEGPGRNSLC*LETKFT Trigger: AGTGAACTTTGTCTCCAGGCAACATAAGGAGTTCCT...CCCTGGACCTTCTTGCCTAAGTGTTGTGCTTGTAAATACACAGTAATAGTGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR CCA 90 bp | CGCGTACTCGCGCGCATTAAACTAAACTTTCAGAACCAAATCTCATCAAGTCAATGCATTGTACAGGTCTaGACATCCATTGGAAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: RVLARIKLNFQNQISSSQCIVQV*TSIGKF Trigger: GAACTTTCCAATGGATGTCCAGACCTGTACAATGCA...TTGACTTGATGAGATTTGGTTCTGAAAGTTTAGTTTAATGCGCGCGAGTACGCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR TCA 90 bp | CGCGTACTCGCGCGCATTAAACTAAACTTTCAGAACCAAATCTCATCAAGTCAAGGTGGTTTCTGTGACTaGTCCAAAACTGTTGATAAA | + |
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Preference number: 4 (lower is better) Translates to: RVLARIKLNFQNQISSSQGGFCD*SKTVDK Trigger: TTTATCAACAGTTTTGGATCAGTCACAGAAACCACC...TTGACTTGATGAGATTTGGTTCTGAAAGTTTAGTTTAATGCGCGCGAGTACGCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR GCA 90 bp | CGCGTACTCGCGCGCATTAAACTAAACTTTCAGAACCAAATCTCATCAAGTCAACGTGAATCATTCCACTaGTGTCTCAGAAAAATGTTC | + |
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Preference number: 4 (lower is better) Translates to: RVLARIKLNFQNQISSSQRESFH*CLRKMF Trigger: GAACATTTTTCTGAGACAGCAGTGGAATGATTCACG...TTGACTTGATGAGATTTGGTTCTGAAAGTTTAGTTTAATGCGCGCGAGTACGCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR GCA 90 bp | AGACACTATTACTGTGTATTTACAAGCACAACACTTAGGCAAGAAGGTCCAGGGTACTGTAGAGCACTTTaGCATTTTTGGAAATCCGCA | + |
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Preference number: 4 (lower is better) Translates to: RHYYCVFTSTTLRQEGPGYCRAL*HFWKSA Trigger: TGCGGATTTCCAAAAATGGCAAAGTGCTCTACAGTA...CCCTGGACCTTCTTGCCTAAGTGTTGTGCTTGTAAATACACAGTAATAGTGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR GCA 90 bp | TTCAAACCACGTAGCTCTGGTACCAAAAAGGCAACGGGTTATGAAAATCACAGTGGTGTCAATTCTTTTTaGCCGATCCACAAACTTCTT | + |
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Preference number: 4 (lower is better) Translates to: FKPRSSGTKKATGYENHSGVNSF*PIHKLL Trigger: AAGAAGTTTGTGGATCGGGCAAAAAGAATTGACACC...ACTGTGATTTTCATAACCCGTTGCCTTTTTGGTACCAGAGCTACGTGGTTTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR CCA 90 bp | AGACACTATTACTGTGTATTTACAAGCACAACACTTAGGCAAGAAGGTCCAGGGATATCAGGTCATTCATaGTGTACCCAAAACTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: RHYYCVFTSTTLRQEGPGISGHS*CTQNSP Trigger: TGGAGAGTTTTGGGTACACCATGAATGACCTGATAT...CCCTGGACCTTCTTGCCTAAGTGTTGTGCTTGTAAATACACAGTAATAGTGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR TCA 90 bp | CGATATTCACTTGGATTGAAAGTACAAATTACTGGTCAGTCAACATTAGGACTAAGATGCCCTGGAACCTaGACTCTGTGTAGTCATTGT | + |
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Preference number: 4 (lower is better) Translates to: RYSLGLKVQITGQSTLGLRCPGT*TLCSHC Trigger: ACAATGACTACACAGAGTTCAGGTTCCAGGGCATCT...TAGTCCTAATGTTGACTGACCAGTAATTTGTACTTTCAATCCAAGTGAATATCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR CCA 90 bp | CACGTAGCTCTGGTACCAAAAAGGCAACGGGTTATGAAAATCACAGTACAGTTTGCAAGTAACGTTTACTaGAGGACCTTTAAAATTTGG | + |
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Preference number: 4 (lower is better) Translates to: HVALVPKRQRVMKITVQFASNVY*RTFKIW Trigger: CCAAATTTTAAAGGTCCTCCAGTAAACGTTACTTGC...AAACTGTACTGTGATTTTCATAACCCGTTGCCTTTTTGGTACCAGAGCTACGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR TCA 90 bp | CGATATTCACTTGGATTGAAAGTACAAATTACTGGTCAGTCAACATTAGGACTAAATCGAATCCAACATTaGGGGATCCAAATCCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: RYSLGLKVQITGQSTLGLNRIQH*GIQIQG Trigger: TCCCTGGATTTGGATCCCTCAATGTTGGATTCGATT...TAGTCCTAATGTTGACTGACCAGTAATTTGTACTTTCAATCCAAGTGAATATCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR CCA 90 bp | CGATATTCACTTGGATTGAAAGTACAAATTACTGGTCAGTCAACATTAGGACTAGCACTTTGCCATTTTTaGAAATCCGCAACAACTTGT | + |
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Preference number: 4 (lower is better) Translates to: RYSLGLKVQITGQSTLGLALCHF*KSATTC Trigger: ACAAGTTGTTGCGGATTTCCAAAAATGGCAAAGTGC...TAGTCCTAATGTTGACTGACCAGTAATTTGTACTTTCAATCCAAGTGAATATCG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS CCA 90 bp | GAAGGAGATAGGGTCTGCGAGGGATGTTTTCCAGACCTGGAGTCATaGTCTTTGCAGAAAGCTTCCCTGAAGTGGTTTGTCCCTAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: EGDRVCEGCFPDLES*SLQKASLKWFVPKK Trigger: TTTCTTAGGGACAAACCACTTCAGGGAAGCTTTCTGCAAAGACCATGACTCCAGGTCTGGAAAACATCCCTCGCAGACCCTATCTCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR CAA 90 bp | GACACTATTACTGTGTATTTACAAGCACAACACTTAGGCAAGAAGGTCCAGGGTGGTTGTGGAAGTGGGTaGGCAGGTGTAGCCTTGACA | + |
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Preference number: 5 (lower is better) Translates to: DTITVYLQAQHLGKKVQGGCGSG*AGVALT Trigger: TGTCAAGGCTACACCTGCCAACCCACTTCCACAACC...ACCCTGGACCTTCTTGCCTAAGTGTTGTGCTTGTAAATACACAGTAATAGTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR CAA 90 bp | AGACACTATTACTGTGTATTTACAAGCACAACACTTAGGCAAGAAGGTCCAGGGTCACATAGGAGACCTTaGGCAGAGATGCCCTGGAAC | + |
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Preference number: 5 (lower is better) Translates to: RHYYCVFTSTTLRQEGPGSHRRP*AEMPWN Trigger: GTTCCAGGGCATCTCTGCCAAAGGTCTCCTATGTGA...CCCTGGACCTTCTTGCCTAAGTGTTGTGCTTGTAAATACACAGTAATAGTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR CAA 90 bp | GACACTATTACTGTGTATTTACAAGCACAACACTTAGGCAAGAAGGTCCAGGGTTGTGCCATCTTTCATTaGGAGGCAGTGACCCATCCC | + |
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Preference number: 5 (lower is better) Translates to: DTITVYLQAQHLGKKVQGCAIFH*EAVTHP Trigger: GGGATGGGTCACTGCCTCCAAATGAAAGATGGCACA...ACCCTGGACCTTCTTGCCTAAGTGTTGTGCTTGTAAATACACAGTAATAGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR CAA 90 bp | TTCAAACCACGTAGCTCTGGTACCAAAAAGGCAACGGGTTATGAAAATCACAGTTTGGCAGGTGTAGCCTaGACAGCTGTGCCATCTTTC | + |
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Preference number: 5 (lower is better) Translates to: FKPRSSGTKKATGYENHSLAGVA*TAVPSF Trigger: GAAAGATGGCACAGCTGTCAAGGCTACACCTGCCAA...ACTGTGATTTTCATAACCCGTTGCCTTTTTGGTACCAGAGCTACGTGGTTTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR CAA 90 bp | GACACTATTACTGTGTATTTACAAGCACAACACTTAGGCAAGAAGGTCCAGGGTATCCGCAACAACTTGTaGTCAGTGGTGACATCATGG | + |
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Preference number: 5 (lower is better) Translates to: DTITVYLQAQHLGKKVQGIRNNL*SVVTSW Trigger: CCATGATGTCACCACTGACAACAAGTTGTTGCGGAT...ACCCTGGACCTTCTTGCCTAAGTGTTGTGCTTGTAAATACACAGTAATAGTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR CAA 90 bp | TTCAAACCACGTAGCTCTGGTACCAAAAAGGCAACGGGTTATGAAAATCACAGTGAAATCCGCAACAACTaGTTGTCAGTGGTGACATCA | + |
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Preference number: 5 (lower is better) Translates to: FKPRSSGTKKATGYENHSEIRNN*LSVVTS Trigger: TGATGTCACCACTGACAACAAGTTGTTGCGGATTTC...ACTGTGATTTTCATAACCCGTTGCCTTTTTGGTACCAGAGCTACGTGGTTTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR CAA 90 bp | GACACTATTACTGTGTATTTACAAGCACAACACTTAGGCAAGAAGGTCCAGGGTAAGGAACTCCTTATGTaGCCTGGAGACAAAGTTCAC | + |
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Preference number: 5 (lower is better) Translates to: DTITVYLQAQHLGKKVQGKELLM*PGDKVH Trigger: GTGAACTTTGTCTCCAGGCAACATAAGGAGTTCCTT...ACCCTGGACCTTCTTGCCTAAGTGTTGTGCTTGTAAATACACAGTAATAGTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR CAA 90 bp | CGCGTACTCGCGCGCATTAAACTAAACTTTCAGAACCAAATCTCATCAAGTCAAAGTTCTTCAGGTCCATaGGACAAGATAAAGTCAAGG | + |
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Preference number: 5 (lower is better) Translates to: RVLARIKLNFQNQISSSQSSSGP*DKIKSR Trigger: CCTTGACTTTATCTTGTCCAATGGACCTGAAGAACT...TTGACTTGATGAGATTTGGTTCTGAAAGTTTAGTTTAATGCGCGCGAGTACGCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR CAA 90 bp | CGCGTACTCGCGCGCATTAAACTAAACTTTCAGAACCAAATCTCATCAAGTCAATGGTGTCAATTCTTTTaGCCCGATCCACAAACTTCT | + |
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Preference number: 5 (lower is better) Translates to: RVLARIKLNFQNQISSSQWCQFF*PDPQTS Trigger: AGAAGTTTGTGGATCGGGCAAAAAGAATTGACACCA...TTGACTTGATGAGATTTGGTTCTGAAAGTTTAGTTTAATGCGCGCGAGTACGCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR CAA 90 bp | CGATATTCACTTGGATTGAAAGTACAAATTACTGGTCAGTCAACATTAGGACTACTGGAGTCATGGTCTTaGCAGAAAGCTTCCCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: RYSLGLKVQITGQSTLGLLESWS*QKASLK Trigger: CTTCAGGGAAGCTTTCTGCAAAGACCATGACTCCAG...TAGTCCTAATGTTGACTGACCAGTAATTTGTACTTTCAATCCAAGTGAATATCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR CAA 90 bp | CACGTAGCTCTGGTACCAAAAAGGCAACGGGTTATGAAAATCACAGTACAGTTTTCCACAAACTTCTTCTaGATAGCATCTGCATCTTTG | + |
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Preference number: 5 (lower is better) Translates to: HVALVPKRQRVMKITVQFSTNFF*IASASL Trigger: CAAAGATGCAGATGCTATCAAGAAGAAGTTTGTGGA...AAACTGTACTGTGATTTTCATAACCCGTTGCCTTTTTGGTACCAGAGCTACGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS-3UTR CAA 90 bp | CGATATTCACTTGGATTGAAAGTACAAATTACTGGTCAGTCAACATTAGGACTAAGCACTTTGCCATTTTaGGAAATCCGCAACAACTTG | + |
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Preference number: 5 (lower is better) Translates to: RYSLGLKVQITGQSTLGLSTLPF*EIRNNL Trigger: CAAGTTGTTGCGGATTTCCAAAAATGGCAAAGTGCT...TAGTCCTAATGTTGACTGACCAGTAATTTGTACTTTCAATCCAAGTGAATATCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS CAA 90 bp | AAGTGGGTTGGCAGGTGTAGCCTTGACAGCTGTGCCATCTTTCATTaGGAGGCAGTGACCCATCCCATAGCCACTGAAGTTAAAACGACT | + |
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Preference number: 6 (lower is better) Translates to: KWVGRCSLDSCAIFH*EAVTHPIATEVKTT Trigger: AGTCGTTTTAACTTCAGTGGCTATGGGATGGGTCACTGCCTCCAAATGAAAGATGGCACAGCTGTCAAGGCTACACCTGCCAACCCACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS CAA 72 bp | CTTCTGTCGTCTCCGGAGACGAAGGAACTCCTTATGTaGCCTGGAGACAAAGTTCACTGCTGCATATTCCAG | + |
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Preference number: 6 (lower is better) Translates to: LLSSPETKELLM*PGDKVHCCIFQ Trigger: CTGGAATATGCAGCAGTGAACTTTGTCTCCAGGCAACATAAGGAGTTCCTTCGTCTCCGGAGACGACAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS CCA 72 bp | GTGTACCCAAAACTCTCCAGCTGCATTGTACAGGTCTaGACATCCATTGGAAAGTTCTTCAGGTCCATTGGA | + |
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Preference number: 6 (lower is better) Translates to: VYPKLSSCIVQV*TSIGKFFRSIG Trigger: TCCAATGGACCTGAAGAACTTTCCAATGGATGTCCAGACCTGTACAATGCAGCTGGAGAGTTTTGGGTACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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| CDS GCA 72 bp | ATTAATTTATCCAAGAAATCTGAAGGAGATAGGGTCTaGGAGGGATGTTTTCCAGACCTGGAGTCATGGTCT | + |
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Preference number: 6 (lower is better) Translates to: INLSKKSEGDRV*EGCFPDLESWS Trigger: AGACCATGACTCCAGGTCTGGAAAACATCCCTCGCAGACCCTATCTCCTTCAGATTTCTTGGATAAATTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058787.9 |
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