Pregenerated sensors for GLRA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000263Ensembl transcript IDs: ENSMUST00000075603.5, ENSMUST00000102716.10, ENSMUST00000108853.8
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTCCCTAGTTGCTGTATTCAAAAAGGCCCTCCCACCTCATGCCCTTaGAGGCTAGATGGATATTGCAATACCCTGGAAGTATCCACCCCT | + |
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Preference number: 1 (lower is better) Translates to: VPSCCIQKGPPTSCP*RLDGYCNTLEVSTP Trigger: AGGGGTGGATACTTCCAGGGTATTGCAATATCCATCTAGCCTCCAAGGGCATGAGGTGGGAGGGCCTTTTTGAATACAGCAACTAGGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR GCA 90 bp | CAAAAAGGCCCTCCCACCTCATGCCCTTGGAGGCTAGATGGATATTaGAATACCCTGGAAGTATCCACCCCTGTGGTTTCTATTGCACTT | + |
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Preference number: 1 (lower is better) Translates to: QKGPPTSCPWRLDGY*NTLEVSTPVVSIAL Trigger: AAGTGCAATAGAAACCACAGGGGTGGATACTTCCAGGGTATTGCAATATCCATCTAGCCTCCAAGGGCATGAGGTGGGAGGGCCTTTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR CCA 90 bp | CTGTATTCAAAAAGGCCCTCCCACCTCATGCCCTTGGAGGCTAGATaGATATTGCAATACCCTGGAAGTATCCACCCCTGTGGTTTCTAT | + |
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Preference number: 1 (lower is better) Translates to: LYSKRPSHLMPLEAR*ILQYPGSIHPCGFY Trigger: ATAGAAACCACAGGGGTGGATACTTCCAGGGTATTGCAATATCCATCTAGCCTCCAAGGGCATGAGGTGGGAGGGCCTTTTTGAATACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCGGTTTAAAGATAGACATGGCATTTGTAAGGGTGTGATGGGGGCACATACCTGGGGCAGGCAGCACTaGCCTCCAAACAGGACCCCA | + |
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Preference number: 2 (lower is better) Translates to: VRFKDRHGICKGVMGAHTWGRQH*PPNRTP Trigger: TGGGGTCCTGTTTGGAGGTCAGTGCTGCCTGCCCCA...GGTATGTGCCCCCATCACACCCTTACAAATGCCATGTCTATCTTTAAACCGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR-3UTR TCA 90 bp | ATGGGGGCACATACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAATTGGGGCAGGCAGCACTaGCCTCCAAACAGGACCCCA | + |
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Preference number: 2 (lower is better) Translates to: MGAHTTASLVVSISTLGNWGRQH*PPNRTP Trigger: TGGGGTCCTGTTTGGAGGTCAGTGCTGCCTGCCCCA...ATTTCCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGTATGTGCCCCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR-3UTR GCA 90 bp | CCTTGGAGGCTAGATGGATATTGCAATACCCTGGAAGTATCCACCCCTGTGGTTAGGGGGATGGGTGTGTaGTCTTCCTTTCTCCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: PWRLDGYCNTLEVSTPVVRGMGV*SSFLPP Trigger: AGGAGGGAGAAAGGAAGAGCACACACCCATCCCCCT...AACCACAGGGGTGGATACTTCCAGGGTATTGCAATATCCATCTAGCCTCCAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR-3UTR GCA 90 bp | ACCTCATGCCCTTGGAGGCTAGATGGATATTGCAATACCCTGGAAGTATCCACCAGGGGGATGGGTGTGTaGTCTTCCTTTCTCCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: TSCPWRLDGYCNTLEVSTRGMGV*SSFLPP Trigger: AGGAGGGAGAAAGGAAGAGCACACACCCATCCCCCT...GGTGGATACTTCCAGGGTATTGCAATATCCATCTAGCCTCCAAGGGCATGAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR-3UTR CCA 90 bp | GTGATGGGGGCACATACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGACTTGGTGGAGGGGGATaGGTGTGTGCTCTTCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: VMGAHTTASLVVSISTLGLGGGG*VCALPF Trigger: GAAAGGAAGAGCACACACCCATCCCCCTCCACCAAG...TCCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGTATGTGCCCCCATCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTGGAGGCTAGATGGATATTGCAATACCCTGGAAGTATCCACCCCTGTGGTTCTTGGTGGAGGGGGATaGGTGTGTGCTCTTCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: PWRLDGYCNTLEVSTPVVLGGGG*VCALPF Trigger: GAAAGGAAGAGCACACACCCATCCCCCTCCACCAAG...AACCACAGGGGTGGATACTTCCAGGGTATTGCAATATCCATCTAGCCTCCAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR-3UTR TCA 90 bp | ACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAATATTGTCCATCACTGGGGCAGGCAGCACTaGCCTCCAAACAGGACCCCA | + |
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Preference number: 2 (lower is better) Translates to: TTASLVVSISTLGNIVHHWGRQH*PPNRTP Trigger: TGGGGTCCTGTTTGGAGGTCAGTGCTGCCTGCCCCA...GTGATGGACAATATTTCCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGATGGGGGCACATACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGTTCTATTGCACTTGGTaGAGGGGGATGGGTGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: CDGGTYHSKLSCVHFYSGFYCTW*RGMGVC Trigger: GCACACACCCATCCCCCTCCACCAAGTGCAATAGAA...CCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGTATGTGCCCCCATCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR-3UTR CCA 90 bp | GTGATGGGGGCACATACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGATTCTATTGCACTTGGTaGAGGGGGATGGGTGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: VMGAHTTASLVVSISTLGFYCTW*RGMGVC Trigger: GCACACACCCATCCCCCTCCACCAAGTGCAATAGAA...TCCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGTATGTGCCCCCATCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGGGGCACATACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAATCTTGGTGGAGGGGGATaGGTGTGTGCTCTTCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: MGAHTTASLVVSISTLGNLGGGG*VCALPF Trigger: GAAAGGAAGAGCACACACCCATCCCCCTCCACCAAG...ATTTCCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGTATGTGCCCCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGATGGGGGCACATACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGCCCTTGGAGGCTAGATaGATATTGCAATACCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: CDGGTYHSKLSCVHFYSGPLEAR*ILQYPG Trigger: TCCAGGGTATTGCAATATCCATCTAGCCTCCAAGGG...CCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGTATGTGCCCCCATCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGATGGGGGCACATACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAGTATCCACCCCTGTaGTTTCTATTGCACTTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: CDGGTYHSKLSCVHFYSGKYPPL*FLLHLV Trigger: CACCAAGTGCAATAGAAACCACAGGGGTGGATACTT...CCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGTATGTGCCCCCATCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR-3UTR GCA 90 bp | ATTTCTACTCTGGGAAATATTGTCCATCACGTTGGGGACTTTAAGAGTTTAAGCAGGGGGATGGGTGTGTaGTCTTCCTTTCTCCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: ISTLGNIVHHVGDFKSLSRGMGV*SSFLPP Trigger: AGGAGGGAGAAAGGAAGAGCACACACCCATCCCCCT...GCTTAAACTCTTAAAGTCCCCAACGTGATGGACAATATTTCCCAGAGTAGAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR-3UTR CCA 90 bp | GTTAAATGTTATATATTACACTGCTTTCCTGTTCTGGGGCAGGCAGCACTGACCAAGTATCCACCCCTGTaGTTTCTATTGCACTTGGTG | + |
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Preference number: 2 (lower is better) Translates to: VKCYILHCFPVLGQAALTKYPPL*FLLHLV Trigger: CACCAAGTGCAATAGAAACCACAGGGGTGGATACTT...GGTCAGTGCTGCCTGCCCCAGAACAGGAAAGCAGTGTAATATATAACATTTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR-3UTR CCA 90 bp | ACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAATATTGTCCATCACCCCTTGGAGGCTAGATaGATATTGCAATACCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: TTASLVVSISTLGNIVHHPLEAR*ILQYPG Trigger: TCCAGGGTATTGCAATATCCATCTAGCCTCCAAGGG...GTGATGGACAATATTTCCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR-3UTR CCA 90 bp | GGCACATACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAATATTGTAAGTATCCACCCCTGTaGTTTCTATTGCACTTGGTG | + |
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Preference number: 2 (lower is better) Translates to: GTYHSKLSCVHFYSGKYCKYPPL*FLLHLV Trigger: CACCAAGTGCAATAGAAACCACAGGGGTGGATACTT...ACAATATTTCCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGTATGTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR-3UTR GCA 90 bp | GTCCGGTTTAAAGATAGACATGGCATTTGTAAGGGTGTGATGGGGGCACATACCTGTTCTTGTGGGTTTTaGATTAATGTTAAGCATGGT | + |
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Preference number: 2 (lower is better) Translates to: VRFKDRHGICKGVMGAHTCSCGF*INVKHG Trigger: ACCATGCTTAACATTAATGCAAAACCCACAAGAACA...GGTATGTGCCCCCATCACACCCTTACAAATGCCATGTCTATCTTTAAACCGGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR-3UTR CCA 90 bp | TTTAAAGATAGACATGGCATTTGTAAGGGTGTGATGGGGGCACATACCACAGCATGTCCATTTCTACTCTaGGAAATATTGTCCATCACG | + |
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Preference number: 2 (lower is better) Translates to: FKDRHGICKGVMGAHTTACPFLL*EILSIT Trigger: CGTGATGGACAATATTTCCCAGAGTAGAAATGGACA...TGCTGTGGTATGTGCCCCCATCACACCCTTACAAATGCCATGTCTATCTTTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR-3UTR GCA 90 bp | ACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAATATTGTCCATCACTGTTATATATTACACTaGTTTCCTGTTCTGGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: TTASLVVSISTLGNIVHHCYILH*FPVLGQ Trigger: CTGCCCCAGAACAGGAAAGCAGTGTAATATATAACA...GTGATGGACAATATTTCCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGATTTAAGAGACGTATCTTTTGTTCTTGTGGGTTTTGCATTAATGTTAAGCCTCATGGTCCCTAGTTaGTGTATTCAAAAAGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: ADLRDVSFVLVGFALMLSLMVPS*CIQKGP Trigger: AGGGCCTTTTTGAATACAGCAACTAGGGACCATGAG...GCTTAACATTAATGCAAAACCCACAAGAACAAAAGATACGTCTCTTAAATCAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR-3UTR TCA 90 bp | ATTTCTACTCTGGGAAATATTGTCCATCACGTTGGGGACTTTAAGAGTTTAAGCTCAACCCAATGGACTTaGATTTTGAAAGCTGTGATT | + |
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Preference number: 2 (lower is better) Translates to: ISTLGNIVHHVGDFKSLSSTQWT*ILKAVI Trigger: AATCACAGCTTTCAAAATTCAAGTCCATTGGGTTGA...GCTTAAACTCTTAAAGTCCCCAACGTGATGGACAATATTTCCCAGAGTAGAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR GCA 72 bp | CAATACCCTGGAAGTATCCACCCCTGTGGTTTCTATTaGACTTGGTGGAGGGGGATGGGTGTGTGCTCTTCC | + |
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Preference number: 3 (lower is better) Translates to: QYPGSIHPCGFY*TWWRGMGVCSS Trigger: GGAAGAGCACACACCCATCCCCCTCCACCAAGTGCAATAGAAACCACAGGGGTGGATACTTCCAGGGTATTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR CCA 72 bp | GGAAGTATCCACCCCTGTGGTTTCTATTGCACTTGGTaGAGGGGGATGGGTGTGTGCTCTTCCTTTCTCCCT | + |
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Preference number: 3 (lower is better) Translates to: GSIHPCGFYCTW*RGMGVCSSFLP Trigger: AGGGAGAAAGGAAGAGCACACACCCATCCCCCTCCACCAAGTGCAATAGAAACCACAGGGGTGGATACTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR CCA 72 bp | CCTGGAAGTATCCACCCCTGTGGTTTCTATTGCACTTaGTGGAGGGGGATGGGTGTGTGCTCTTCCTTTCTC | + |
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Preference number: 3 (lower is better) Translates to: PGSIHPCGFYCT*WRGMGVCSSFL Trigger: GAGAAAGGAAGAGCACACACCCATCCCCCTCCACCAAGTGCAATAGAAACCACAGGGGTGGATACTTCCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR GCA 72 bp | CCTCCCACCTCATGCCCTTGGAGGCTAGATGGATATTaGAATACCCTGGAAGTATCCACCCCTGTGGTTTCT | + |
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Preference number: 3 (lower is better) Translates to: PPTSCPWRLDGY*NTLEVSTPVVS Trigger: AGAAACCACAGGGGTGGATACTTCCAGGGTATTGCAATATCCATCTAGCCTCCAAGGGCATGAGGTGGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR CCA 72 bp | AAAAGGCCCTCCCACCTCATGCCCTTGGAGGCTAGATaGATATTGCAATACCCTGGAAGTATCCACCCCTGT | + |
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Preference number: 3 (lower is better) Translates to: KRPSHLMPLEAR*ILQYPGSIHPC Trigger: ACAGGGGTGGATACTTCCAGGGTATTGCAATATCCATCTAGCCTCCAAGGGCATGAGGTGGGAGGGCCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR GCA 72 bp | CCTAGTTGCTGTATTCAAAAAGGCCCTCCCACCTCATaGCCTTGGAGGCTAGATGGATATTGCAATACCCTG | + |
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Preference number: 3 (lower is better) Translates to: PSCCIQKGPPTS*PWRLDGYCNTL Trigger: CAGGGTATTGCAATATCCATCTAGCCTCCAAGGGCATGAGGTGGGAGGGCCTTTTTGAATACAGCAACTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR CCA 72 bp | ATGGATATTGCAATACCCTGGAAGTATCCACCCCTGTaGTTTCTATTGCACTTGGTGGAGGGGGATGGGTGT | + |
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Preference number: 3 (lower is better) Translates to: MDIAIPWKYPPL*FLLHLVEGDGC Trigger: ACACCCATCCCCCTCCACCAAGTGCAATAGAAACCACAGGGGTGGATACTTCCAGGGTATTGCAATATCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR-3UTR CAA 90 bp | GTTAAATGTTATATATTACACTGCTTTCCTGTTCTGGGGCAGGCAGCACTGACCCTCAACCCAATGGACTaGAATTTTGAAAGCTGTGAT | + |
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Preference number: 3 (lower is better) Translates to: VKCYILHCFPVLGQAALTLNPMD*NFESCD Trigger: ATCACAGCTTTCAAAATTCAAGTCCATTGGGTTGAG...GGTCAGTGCTGCCTGCCCCAGAACAGGAAAGCAGTGTAATATATAACATTTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR GCA 72 bp | TTAATGTTAAGCATGGTTAAATGTTATATATTACACTaGTTTCCTGTTCTGGGGCAGGCAGCACTGACCTCC | + |
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Preference number: 3 (lower is better) Translates to: LMLSMVKCYILH*FPVLGQAALTS Trigger: GGAGGTCAGTGCTGCCTGCCCCAGAACAGGAAAGCAGTGTAATATATAACATTTAACCATGCTTAACATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS-3UTR CCA 90 bp | TCCCACCTCATGCCCTTGGAGGCTAGATGGATATTGCAATACCCTGGAAGTATCTCTCCTCCGGGGACTTaGATGGCGCAGGAGGCGGGT | + |
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Preference number: 4 (lower is better) Translates to: SHLMPLEARWILQYPGSISPPGT*MAQEAG Trigger: ACCCGCCTCCTGCGCCATCCAAGTCCCCGGAGGAGA...GATACTTCCAGGGTATTGCAATATCCATCTAGCCTCCAAGGGCATGAGGTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS-3UTR CCA 90 bp | TGTGATGGGGGCACATACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGGGCCTGCAGACAGGCTaGGCCCATCCCATAGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: CDGGTYHSKLSCVHFYSGGLQTG*AHPIGR Trigger: TCTGCCTATGGGATGGGCCCAGCCTGTCTGCAGGCC...CCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGTATGTGCCCCCATCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS-3UTR CCA 90 bp | TCCCACCTCATGCCCTTGGAGGCTAGATGGATATTGCAATACCCTGGAAGTATCGGCCTGCAGACAGGCTaGGCCCATCCCATAGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: SHLMPLEARWILQYPGSIGLQTG*AHPIGR Trigger: TCTGCCTATGGGATGGGCCCAGCCTGTCTGCAGGCC...GATACTTCCAGGGTATTGCAATATCCATCTAGCCTCCAAGGGCATGAGGTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS-3UTR GCA 90 bp | TGTGATGGGGGCACATACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGATGCCATCCTTGGCCTaGAGACAGGCTGGGCCCATC | + |
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Preference number: 4 (lower is better) Translates to: CDGGTYHSKLSCVHFYSGMPSLA*RQAGPI Trigger: GATGGGCCCAGCCTGTCTGCAGGCCAAGGATGGCAT...CCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGTATGTGCCCCCATCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS-3UTR GCA 90 bp | ACCTCATGCCCTTGGAGGCTAGATGGATATTGCAATACCCTGGAAGTATCCACCATGCCATCCTTGGCCTaGAGACAGGCTGGGCCCATC | + |
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Preference number: 4 (lower is better) Translates to: TSCPWRLDGYCNTLEVSTMPSLA*RQAGPI Trigger: GATGGGCCCAGCCTGTCTGCAGGCCAAGGATGGCAT...GGTGGATACTTCCAGGGTATTGCAATATCCATCTAGCCTCCAAGGGCATGAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR CAA 72 bp | CCCTGGAAGTATCCACCCCTGTGGTTTCTATTGCACTaGGTGGAGGGGGATGGGTGTGTGCTCTTCCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: PWKYPPLWFLLH*VEGDGCVLFLS Trigger: AGAAAGGAAGAGCACACACCCATCCCCCTCCACCAAGTGCAATAGAAACCACAGGGGTGGATACTTCCAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| 3UTR CAA 72 bp | CCCTCCCACCTCATGCCCTTGGAGGCTAGATGGATATaGCAATACCCTGGAAGTATCCACCCCTGTGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: PSHLMPLEARWI*QYPGSIHPCGF Trigger: GAAACCACAGGGGTGGATACTTCCAGGGTATTGCAATATCCATCTAGCCTCCAAGGGCATGAGGTGGGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS-3UTR TCA 90 bp | GTCCGGTTTAAAGATAGACATGGCATTTGTAAGGGTGTGATGGGGGCACATACCCAGGAAGTCCGAGGGTaGCATAGGCTTGGGTGCGGA | + |
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Preference number: 4 (lower is better) Translates to: VRFKDRHGICKGVMGAHTQEVRG*HRLGCG Trigger: TCCGCACCCAAGCCTATGTCACCCTCGGACTTCCTG...GGTATGTGCCCCCATCACACCCTTACAAATGCCATGTCTATCTTTAAACCGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 |
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| CDS-3UTR CCA 90 bp | TGTGATGGGGGCACATACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAATTCTTCAGGTCCATaGGGCAGGCCAGCGTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: CDGGTYHSKLSCVHFYSGNSSGP*GRPASG Trigger: CCCTGACGCTGGCCTGCCCCATGGACCTGAAGAATT...CCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGTATGTGCCCCCATCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS-3UTR CCA 90 bp | ATGGGGGCACATACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAATGGCCTGCAGACAGGCTaGGCCCATCCCATAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: MGAHTTASLVVSISTLGNGLQTG*AHPIGR Trigger: TCTGCCTATGGGATGGGCCCAGCCTGTCTGCAGGCC...ATTTCCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGTATGTGCCCCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR CCA 90 bp | TTTAAAGATAGACATGGCATTTGTAAGGGTGTGATGGGGGCACATACCACAGCATCTCCTCCGGGGACTTaGATGGCGCAGGAGGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FKDRHGICKGVMGAHTTASPPGT*MAQEAG Trigger: ACCCGCCTCCTGCGCCATCCAAGTCCCCGGAGGAGA...TGCTGTGGTATGTGCCCCCATCACACCCTTACAAATGCCATGTCTATCTTTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR TCA 90 bp | CCTTGGAGGCTAGATGGATATTGCAATACCCTGGAAGTATCCACCCCTGTGGTTCATAGGCAGAGAAGTTaGAGCGGCCTTCTCCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: PWRLDGYCNTLEVSTPVVHRQRS*SGLLHP Trigger: AGGGTGGAGAAGGCCGCTTCAACTTCTCTGCCTATG...AACCACAGGGGTGGATACTTCCAGGGTATTGCAATATCCATCTAGCCTCCAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR CCA 90 bp | GGCACATACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAATATTGTTCTCCTCCGGGGACTTaGATGGCGCAGGAGGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GTYHSKLSCVHFYSGKYCSPPGT*MAQEAG Trigger: ACCCGCCTCCTGCGCCATCCAAGTCCCCGGAGGAGA...ACAATATTTCCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGTATGTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR TCA 90 bp | GTTAAATGTTATATATTACACTGCTTTCCTGTTCTGGGGCAGGCAGCACTGACCGCCGAGACACAAAGTTaGCGGCGGCGTACTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VKCYILHCFPVLGQAALTAETQS*RRRTPA Trigger: TGCTGGAGTACGCCGCCGTCAACTTTGTGTCTCGGC...GGTCAGTGCTGCCTGCCCCAGAACAGGAAAGCAGTGTAATATATAACATTTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR GCA 90 bp | CCTTGGAGGCTAGATGGATATTGCAATACCCTGGAAGTATCCACCCCTGTGGTTACCTGCACAGCTCCTTaGTCCTGCCACTCAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: PWRLDGYCNTLEVSTPVVTCTAP*SCHSKM Trigger: CATCTTTGAGTGGCAGGAGCAAGGAGCTGTGCAGGT...AACCACAGGGGTGGATACTTCCAGGGTATTGCAATATCCATCTAGCCTCCAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR GCA 90 bp | TTTAAAGATAGACATGGCATTTGTAAGGGTGTGATGGGGGCACATACCACAGCAATGCCATCCTTGGCCTaGAGACAGGCTGGGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: FKDRHGICKGVMGAHTTAMPSLA*RQAGPI Trigger: GATGGGCCCAGCCTGTCTGCAGGCCAAGGATGGCAT...TGCTGTGGTATGTGCCCCCATCACACCCTTACAAATGCCATGTCTATCTTTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR CCA 90 bp | GTCCGGTTTAAAGATAGACATGGCATTTGTAAGGGTGTGATGGGGGCACATACCTCCGTGGTGATTTCGTaGAAGTGGGCCCCCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VRFKDRHGICKGVMGAHTSVVIS*KWAPFS Trigger: TGAGAAGGGGGCCCACTTCCACGAAATCACCACGGA...GGTATGTGCCCCCATCACACCCTTACAAATGCCATGTCTATCTTTAAACCGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR CCA 90 bp | GTTAAATGTTATATATTACACTGCTTTCCTGTTCTGGGGCAGGCAGCACTGACCATCTGCCGCTCCAGGTaGAATCGGGCCTCGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VKCYILHCFPVLGQAALTICRSR*NRASMQ Trigger: CTGCATCGAGGCCCGATTCCACCTGGAGCGGCAGAT...GGTCAGTGCTGCCTGCCCCAGAACAGGAAAGCAGTGTAATATATAACATTTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR TCA 90 bp | CCTTGGAGGCTAGATGGATATTGCAATACCCTGGAAGTATCCACCCCTGTGGTTTCCTTCAGAATAAACTaGGGCAGGGTCAGTCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PWRLDGYCNTLEVSTPVVSFRIN*GRVSPS Trigger: AGACGGACTGACCCTGCCTCAGTTTATTCTGAAGGA...AACCACAGGGGTGGATACTTCCAGGGTATTGCAATATCCATCTAGCCTCCAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR TCA 90 bp | GGCACATACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAATATTGTGCCGAGACACAAAGTTaGCGGCGGCGTACTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GTYHSKLSCVHFYSGKYCAETQS*RRRTPA Trigger: TGCTGGAGTACGCCGCCGTCAACTTTGTGTCTCGGC...ACAATATTTCCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGTATGTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTCAACCCAATGGACTTGAATTTTGAAAGCTGTGATTTCCCAATCCCCTCCTCCGTGGTGATTTCGTaGAAGTGGGCCCCCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLNPMDLNFESCDFPIPSSVVIS*KWAPFS Trigger: TGAGAAGGGGGCCCACTTCCACGAAATCACCACGGA...GGAGGGGATTGGGAAATCACAGCTTTCAAAATTCAAGTCCATTGGGTTGAGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR GCA 90 bp | ATGGGGGCACATACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAATACCTGCACAGCTCCTTaGTCCTGCCACTCAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: MGAHTTASLVVSISTLGNTCTAP*SCHSKM Trigger: CATCTTTGAGTGGCAGGAGCAAGGAGCTGTGCAGGT...ATTTCCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGTATGTGCCCCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR GCA 90 bp | GTGATGGGGGCACATACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAGCAGTTCCTTGTGTTaGCGAGACACAAAGTTGACG | + |
|
Preference number: 4 (lower is better) Translates to: VMGAHTTASLVVSISTLGSSSLC*RDTKLT Trigger: CGTCAACTTTGTGTCTCGGCAACACAAGGAACTGCT...TCCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGTATGTGCCCCCATCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR CCA 90 bp | GGCACATACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAATATTGTAATTCTTCAGGTCCATaGGGCAGGCCAGCGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GTYHSKLSCVHFYSGKYCNSSGP*GRPASG Trigger: CCCTGACGCTGGCCTGCCCCATGGACCTGAAGAATT...ACAATATTTCCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGTATGTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR CCA 90 bp | CTCATGCCCTTGGAGGCTAGATGGATATTGCAATACCCTGGAAGTATCCACCCCATCTTCTTGGCTCTCTaGATGAAGAGTTTCCGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LMPLEARWILQYPGSIHPIFLAL*MKSFRI Trigger: GATGCGGAAACTCTTCATCCAGAGAGCCAAGAAGAT...GGGGTGGATACTTCCAGGGTATTGCAATATCCATCTAGCCTCCAAGGGCATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| 3UTR CAA 72 bp | TTGCTGTATTCAAAAAGGCCCTCCCACCTCATGCCCTaGGAGGCTAGATGGATATTGCAATACCCTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLYSKRPSHLMP*EARWILQYPGS Trigger: ACTTCCAGGGTATTGCAATATCCATCTAGCCTCCAAGGGCATGAGGTGGGAGGGCCTTTTTGAATACAGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS-3UTR TCA 90 bp | ATTTCTACTCTGGGAAATATTGTCCATCACGTTGGGGACTTTAAGAGTTTAAGCCAGGAAGTCCGAGGGTaGCATAGGCTTGGGTGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: ISTLGNIVHHVGDFKSLSQEVRG*HRLGCG Trigger: TCCGCACCCAAGCCTATGTCACCCTCGGACTTCCTG...GCTTAAACTCTTAAAGTCCCCAACGTGATGGACAATATTTCCCAGAGTAGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 |
||
| CDS-3UTR TCA 90 bp | GGCACATACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAATATTGTCAGAAGTCCTCCCCATaGGCTTATCCAGGAAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GTYHSKLSCVHFYSGKYCQKSSP*AYPGSP Trigger: CGGACTTCCTGGATAAGCTCATGGGGAGGACTTCTG...ACAATATTTCCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGTATGTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 |
||
| CDS-3UTR TCA 90 bp | AGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAATATTGTCCATCACGTTGGCATAGGCAGAGAAGTTaGAGCGGCCTTCTCCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: SKLSCVHFYSGKYCPSRWHRQRS*SGLLHP Trigger: AGGGTGGAGAAGGCCGCTTCAACTTCTCTGCCTATG...CCAACGTGATGGACAATATTTCCCAGAGTAGAAATGGACACAACTAAGCTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS-3UTR TCA 90 bp | GGCACATACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAATATTGTCATAGGCAGAGAAGTTaGAGCGGCCTTCTCCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: GTYHSKLSCVHFYSGKYCHRQRS*SGLLHP Trigger: AGGGTGGAGAAGGCCGCTTCAACTTCTCTGCCTATG...ACAATATTTCCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGTATGTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS-3UTR GCA 90 bp | GTCCGGTTTAAAGATAGACATGGCATTTGTAAGGGTGTGATGGGGGCACATACCAGCAGTTCCTTGTGTTaGCGAGACACAAAGTTGACG | + |
|
Preference number: 4 (lower is better) Translates to: VRFKDRHGICKGVMGAHTSSSLC*RDTKLT Trigger: CGTCAACTTTGTGTCTCGGCAACACAAGGAACTGCT...GGTATGTGCCCCCATCACACCCTTACAAATGCCATGTCTATCTTTAAACCGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS-3UTR CCA 90 bp | GGCACATACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAATATTGTTCCGTGGTGATTTCGTaGAAGTGGGCCCCCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GTYHSKLSCVHFYSGKYCSVVIS*KWAPFS Trigger: TGAGAAGGGGGCCCACTTCCACGAAATCACCACGGA...ACAATATTTCCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGTATGTGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR CCA 90 bp | GTGATGGGGGCACATACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGACTGTGTTGTAGTGCTTaGTGCAGTATCTCAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VMGAHTTASLVVSISTLGLCCSA*CSISGL Trigger: AAGACCTGAGATACTGCACCAAGCACTACAACACAG...TCCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGTATGTGCCCCCATCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS-3UTR CCA 90 bp | ATTTCTACTCTGGGAAATATTGTCCATCACGTTGGGGACTTTAAGAGTTTAAGCATCTGCCGCTCCAGGTaGAATCGGGCCTCGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ISTLGNIVHHVGDFKSLSICRSR*NRASMQ Trigger: CTGCATCGAGGCCCGATTCCACCTGGAGCGGCAGAT...GCTTAAACTCTTAAAGTCCCCAACGTGATGGACAATATTTCCCAGAGTAGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS-3UTR TCA 90 bp | CCTCTCAACCCAATGGACTTGAATTTTGAAAGCTGTGATTTCCCAATCCCCTCCCCTGCCACTCAAAGATaGGGTCGTTCATGGTATATC | + |
|
Preference number: 4 (lower is better) Translates to: PLNPMDLNFESCDFPIPSPATQR*GRSWYI Trigger: GATATACCATGAACGACCTCATCTTTGAGTGGCAGG...GGAGGGGATTGGGAAATCACAGCTTTCAAAATTCAAGTCCATTGGGTTGAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS-3UTR GCA 90 bp | TGTGATGGGGGCACATACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGTGTTGTAGTGCTTGGTaGAGTATCTCAGGTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CDGGTYHSKLSCVHFYSGCCSAW*SISGLS Trigger: AGAAAGACCTGAGATACTGCACCAAGCACTACAACA...CCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGTATGTGCCCCCATCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS-3UTR CCA 90 bp | GTCCGGTTTAAAGATAGACATGGCATTTGTAAGGGTGTGATGGGGGCACATACCCTGTGTTGTAGTGCTTaGTGCAGTATCTCAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VRFKDRHGICKGVMGAHTLCCSA*CSISGL Trigger: AAGACCTGAGATACTGCACCAAGCACTACAACACAG...GGTATGTGCCCCCATCACACCCTTACAAATGCCATGTCTATCTTTAAACCGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCTACTCTGGGAAATATTGTCCATCACGTTGGGGACTTTAAGAGTTTAAGCCAGAAGTCCTCCCCATaGGCTTATCCAGGAAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: ISTLGNIVHHVGDFKSLSQKSSP*AYPGSP Trigger: CGGACTTCCTGGATAAGCTCATGGGGAGGACTTCTG...GCTTAAACTCTTAAAGTCCCCAACGTGATGGACAATATTTCCCAGAGTAGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 |
||
| CDS-3UTR TCA 90 bp | GGCACATACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAATATTGTTCCTTCAGAATAAACTaGGGCAGGGTCAGTCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTYHSKLSCVHFYSGKYCSFRIN*GRVSPS Trigger: AGACGGACTGACCCTGCCTCAGTTTATTCTGAAGGA...ACAATATTTCCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGTATGTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR TCA 90 bp | GCTGATTTAAGAGACGTATCTTTTGTTCTTGTGGGTTTTGCATTAATGTTAAGCGCCGAGACACAAAGTTaGCGGCGGCGTACTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ADLRDVSFVLVGFALMLSAETQS*RRRTPA Trigger: TGCTGGAGTACGCCGCCGTCAACTTTGTGTCTCGGC...GCTTAACATTAATGCAAAACCCACAAGAACAAAAGATACGTCTCTTAAATCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR CCA 90 bp | ATGGGGGCACATACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAATATCTTCTTGGCTCTCTaGATGAAGAGTTTCCGCATC | + |
|
Preference number: 4 (lower is better) Translates to: MGAHTTASLVVSISTLGNIFLAL*MKSFRI Trigger: GATGCGGAAACTCTTCATCCAGAGAGCCAAGAAGAT...ATTTCCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGTATGTGCCCCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCTACTCTGGGAAATATTGTCCATCACGTTGGGGACTTTAAGAGTTTAAGCTGTTGTTGGCACCCTTaGCAGAGATGCCATCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISTLGNIVHHVGDFKSLSCCWHP*QRCHPW Trigger: CCAAGGATGGCATCTCTGTCAAGGGTGCCAACAACA...GCTTAAACTCTTAAAGTCCCCAACGTGATGGACAATATTTCCCAGAGTAGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR CCA 90 bp | GTTAAATGTTATATATTACACTGCTTTCCTGTTCTGGGGCAGGCAGCACTGACCATCTTCTTGGCTCTCTaGATGAAGAGTTTCCGCATC | + |
|
Preference number: 4 (lower is better) Translates to: VKCYILHCFPVLGQAALTIFLAL*MKSFRI Trigger: GATGCGGAAACTCTTCATCCAGAGAGCCAAGAAGAT...GGTCAGTGCTGCCTGCCCCAGAACAGGAAAGCAGTGTAATATATAACATTTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR GCA 90 bp | ACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAATATTGTCCATCACTGCTGTAGAGGACATTaGCATTCCGGGAGATTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: TTASLVVSISTLGNIVHHCCRGH*HSGRFL Trigger: TAAGAATCTCCCGGAATGGCAATGTCCTCTACAGCA...GTGATGGACAATATTTCCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR CCA 90 bp | ACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAATATTGTCCATCACCTGTGTTGTAGTGCTTaGTGCAGTATCTCAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TTASLVVSISTLGNIVHHLCCSA*CSISGL Trigger: AAGACCTGAGATACTGCACCAAGCACTACAACACAG...GTGATGGACAATATTTCCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR TCA 90 bp | GCTGATTTAAGAGACGTATCTTTTGTTCTTGTGGGTTTTGCATTAATGTTAAGCTGTTGTTGGCACCCTTaGCAGAGATGCCATCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ADLRDVSFVLVGFALMLSCCWHP*QRCHPW Trigger: CCAAGGATGGCATCTCTGTCAAGGGTGCCAACAACA...GCTTAACATTAATGCAAAACCCACAAGAACAAAAGATACGTCTCTTAAATCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR GCA 90 bp | ACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAATATTGTCCATCACTGTTGTAGTGCTTGGTaGAGTATCTCAGGTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TTASLVVSISTLGNIVHHCCSAW*SISGLS Trigger: AGAAAGACCTGAGATACTGCACCAAGCACTACAACA...GTGATGGACAATATTTCCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR TCA 90 bp | GCTGATTTAAGAGACGTATCTTTTGTTCTTGTGGGTTTTGCATTAATGTTAAGCTCCTTCAGAATAAACTaGGGCAGGGTCAGTCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ADLRDVSFVLVGFALMLSSFRIN*GRVSPS Trigger: AGACGGACTGACCCTGCCTCAGTTTATTCTGAAGGA...GCTTAACATTAATGCAAAACCCACAAGAACAAAAGATACGTCTCTTAAATCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR GCA 90 bp | ATTTCTACTCTGGGAAATATTGTCCATCACGTTGGGGACTTTAAGAGTTTAAGCTGCTGTAGAGGACATTaGCATTCCGGGAGATTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: ISTLGNIVHHVGDFKSLSCCRGH*HSGRFL Trigger: TAAGAATCTCCCGGAATGGCAATGTCCTCTACAGCA...GCTTAAACTCTTAAAGTCCCCAACGTGATGGACAATATTTCCCAGAGTAGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR GCA 90 bp | GCTGATTTAAGAGACGTATCTTTTGTTCTTGTGGGTTTTGCATTAATGTTAAGCTGCTGTAGAGGACATTaGCATTCCGGGAGATTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: ADLRDVSFVLVGFALMLSCCRGH*HSGRFL Trigger: TAAGAATCTCCCGGAATGGCAATGTCCTCTACAGCA...GCTTAACATTAATGCAAAACCCACAAGAACAAAAGATACGTCTCTTAAATCAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR GCA 90 bp | GCTGATTTAAGAGACGTATCTTTTGTTCTTGTGGGTTTTGCATTAATGTTAAGCTGTTGTAGTGCTTGGTaGAGTATCTCAGGTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ADLRDVSFVLVGFALMLSCCSAW*SISGLS Trigger: AGAAAGACCTGAGATACTGCACCAAGCACTACAACA...GCTTAACATTAATGCAAAACCCACAAGAACAAAAGATACGTCTCTTAAATCAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS TCA 90 bp | ATACCCAGAAGTCCTCCCCATGAGCTTATCCAGGAAGTCCGAGGGTaGCATAGGCTTGGGTGCGGAGCGGGCGGCTTCAGCCTCTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: IPRSPPHELIQEVRG*HRLGCGAGGFSLFG Trigger: TCCAAAGAGGCTGAAGCCGCCCGCTCCGCACCCAAGCCTATGTCACCCTCGGACTTCCTGGATAAGCTCATGGGGAGGACTTCTGGGTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 |
||
| CDS CCA 90 bp | GGCTCTCTGGATGAAGAGTTTCCGCATCTCCTCCGGGGACTTGGATaGCGCAGGAGGCGGGTTAGTGGTGTTGTTGTTGTTGGCACCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GSLDEEFPHLLRGLG*RRRRVSGVVVVGTL Trigger: AAGGGTGCCAACAACAACAACACCACTAACCCGCCTCCTGCGCCATCCAAGTCCCCGGAGGAGATGCGGAAACTCTTCATCCAGAGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR CAA 90 bp | TGTGATGGGGGCACATACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGGAGGGTGACATAGGCTaGGGTGCGGAGCGGGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CDGGTYHSKLSCVHFYSGEGDIG*GAERAA Trigger: AGCCGCCCGCTCCGCACCCAAGCCTATGTCACCCTC...CCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGTATGTGCCCCCATCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 |
||
| CDS-3UTR CAA 90 bp | GTCCGGTTTAAAGATAGACATGGCATTTGTAAGGGTGTGATGGGGGCACATACCGAGGGTGACATAGGCTaGGGTGCGGAGCGGGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VRFKDRHGICKGVMGAHTEGDIG*GAERAA Trigger: AGCCGCCCGCTCCGCACCCAAGCCTATGTCACCCTC...GGTATGTGCCCCCATCACACCCTTACAAATGCCATGTCTATCTTTAAACCGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 |
||
| CDS TCA 90 bp | GGAAACCGATGCGAGATATCTTGTCGATCTTCTTGGCTCTCTGGATaGAGAGTTTCCGCATCTCCTCCGGGGACTTGGATGGCGCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GNRCEISCRSSWLSG*RVSASPPGTWMAQE Trigger: CTCCTGCGCCATCCAAGTCCCCGGAGGAGATGCGGAAACTCTTCATCCAGAGAGCCAAGAAGATCGACAAGATATCTCGCATCGGTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR CAA 90 bp | TCCCACCTCATGCCCTTGGAGGCTAGATGGATATTGCAATACCCTGGAAGTATCTGCCGAGACACAAAGTaGACGGCGGCGTACTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SHLMPLEARWILQYPGSICRDTK*TAAYSS Trigger: GCTGGAGTACGCCGCCGTCAACTTTGTGTCTCGGCA...GATACTTCCAGGGTATTGCAATATCCATCTAGCCTCCAAGGGCATGAGGTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR CAA 90 bp | TCCCACCTCATGCCCTTGGAGGCTAGATGGATATTGCAATACCCTGGAAGTATCACAGAGATGCCATCCTaGGCCTGCAGACAGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SHLMPLEARWILQYPGSITEMPS*ACRQAG Trigger: CCCAGCCTGTCTGCAGGCCAAGGATGGCATCTCTGT...GATACTTCCAGGGTATTGCAATATCCATCTAGCCTCCAAGGGCATGAGGTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS CCA 90 bp | ATGGGGAAACCGATGCGAGATATCTTGTCGATCTTCTTGGCTCTCTaGATGAAGAGTTTCCGCATCTCCTCCGGGGACTTGGATGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: MGKPMRDILSIFLAL*MKSFRISSGDLDGA Trigger: TGCGCCATCCAAGTCCCCGGAGGAGATGCGGAAACTCTTCATCCAGAGAGCCAAGAAGATCGACAAGATATCTCGCATCGGTTTCCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR CAA 90 bp | TGTGATGGGGGCACATACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGGCGGCTTCAGCCTCTTaGGAAGCAGCAAGGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CDGGTYHSKLSCVHFYSGAASAS*EAARLK Trigger: CTTCAGCCTTGCTGCTTCCAAAGAGGCTGAAGCCGC...CCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGTATGTGCCCCCATCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 |
||
| CDS-3UTR CAA 90 bp | ACCTCATGCCCTTGGAGGCTAGATGGATATTGCAATACCCTGGAAGTATCCACCGGAGGACCTTTAAAGTaGGGCCTGATCCTGGCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TSCPWRLDGYCNTLEVSTGGPLK*GLILAS Trigger: TGACGCCAGGATCAGGCCCAACTTTAAAGGTCCTCC...GGTGGATACTTCCAGGGTATTGCAATATCCATCTAGCCTCCAAGGGCATGAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 |
||
| CDS-3UTR CAA 90 bp | ACCTCATGCCCTTGGAGGCTAGATGGATATTGCAATACCCTGGAAGTATCCACCCACCTGCACAGCTCCTaGCTCCTGCCACTCAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: TSCPWRLDGYCNTLEVSTHLHSS*LLPLKD Trigger: ATCTTTGAGTGGCAGGAGCAAGGAGCTGTGCAGGTG...GGTGGATACTTCCAGGGTATTGCAATATCCATCTAGCCTCCAAGGGCATGAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS-3UTR CAA 90 bp | TTTAAAGATAGACATGGCATTTGTAAGGGTGTGATGGGGGCACATACCACAGCAACAGAGATGCCATCCTaGGCCTGCAGACAGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FKDRHGICKGVMGAHTTATEMPS*ACRQAG Trigger: CCCAGCCTGTCTGCAGGCCAAGGATGGCATCTCTGT...TGCTGTGGTATGTGCCCCCATCACACCCTTACAAATGCCATGTCTATCTTTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR CAA 90 bp | CTCATGCCCTTGGAGGCTAGATGGATATTGCAATACCCTGGAAGTATCCACCCCGTGGTGTTGTTGTTGTaGGCACCCTTGACAGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: LMPLEARWILQYPGSIHPVVLLL*APLTEM Trigger: CATCTCTGTCAAGGGTGCCAACAACAACAACACCAC...GGGGTGGATACTTCCAGGGTATTGCAATATCCATCTAGCCTCCAAGGGCATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS-3UTR CAA 90 bp | CTCATGCCCTTGGAGGCTAGATGGATATTGCAATACCCTGGAAGTATCCACCCCGGGTTAGTGGTGTTGTaGTTGTTGGCACCCTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: LMPLEARWILQYPGSIHPGLVVL*LLAPLT Trigger: TGTCAAGGGTGCCAACAACAACAACACCACTAACCC...GGGGTGGATACTTCCAGGGTATTGCAATATCCATCTAGCCTCCAAGGGCATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR CAA 90 bp | CTCATGCCCTTGGAGGCTAGATGGATATTGCAATACCCTGGAAGTATCCACCCCCCGATGCGAGATATCTaGTCGATCTTCTTGGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LMPLEARWILQYPGSIHPPMRDI*SIFLAL Trigger: GAGAGCCAAGAAGATCGACAAGATATCTCGCATCGG...GGGGTGGATACTTCCAGGGTATTGCAATATCCATCTAGCCTCCAAGGGCATGAG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS-3UTR CAA 90 bp | GTTAAATGTTATATATTACACTGCTTTCCTGTTCTGGGGCAGGCAGCACTGACCGCGGCTTCAGCCTCTTaGGAAGCAGCAAGGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VKCYILHCFPVLGQAALTAASAS*EAARLK Trigger: CTTCAGCCTTGCTGCTTCCAAAGAGGCTGAAGCCGC...GGTCAGTGCTGCCTGCCCCAGAACAGGAAAGCAGTGTAATATATAACATTTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 |
||
| CDS-3UTR CAA 90 bp | ACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAATATTGTCCATCACTGCCGAGACACAAAGTaGACGGCGGCGTACTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TTASLVVSISTLGNIVHHCRDTK*TAAYSS Trigger: GCTGGAGTACGCCGCCGTCAACTTTGTGTCTCGGCA...GTGATGGACAATATTTCCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR CAA 90 bp | AGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAATATTGTCCATCACGTTGGACAGAGATGCCATCCTaGGCCTGCAGACAGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SKLSCVHFYSGKYCPSRWTEMPS*ACRQAG Trigger: CCCAGCCTGTCTGCAGGCCAAGGATGGCATCTCTGT...CCAACGTGATGGACAATATTTCCCAGAGTAGAAATGGACACAACTAAGCTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS-3UTR CAA 90 bp | CCTTGGAGGCTAGATGGATATTGCAATACCCTGGAAGTATCCACCCCTGTGGTTAAGCAGTTCCTTGTGTaGCCGAGACACAAAGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: PWRLDGYCNTLEVSTPVVKQFLV*PRHKVD Trigger: GTCAACTTTGTGTCTCGGCAACACAAGGAACTGCTT...AACCACAGGGGTGGATACTTCCAGGGTATTGCAATATCCATCTAGCCTCCAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS-3UTR CAA 90 bp | GTGATGGGGGCACATACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAAGCAGTTCCTTGTGTaGCCGAGACACAAAGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VMGAHTTASLVVSISTLGKQFLV*PRHKVD Trigger: GTCAACTTTGTGTCTCGGCAACACAAGGAACTGCTT...TCCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGTATGTGCCCCCATCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS-3UTR CAA 90 bp | GTGATGGGGGCACATACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAATCGAAGCAGTTCCTaGTGTTGCCGAGACACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VMGAHTTASLVVSISTLGNRSSS*CCRDTK Trigger: CTTTGTGTCTCGGCAACACAAGGAACTGCTTCGATT...TCCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGTATGTGCCCCCATCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS-3UTR CAA 90 bp | ACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAATATTGTCCATCACCACCTGCACAGCTCCTaGCTCCTGCCACTCAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: TTASLVVSISTLGNIVHHHLHSS*LLPLKD Trigger: ATCTTTGAGTGGCAGGAGCAAGGAGCTGTGCAGGTG...GTGATGGACAATATTTCCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS-3UTR CAA 90 bp | GTTAAATGTTATATATTACACTGCTTTCCTGTTCTGGGGCAGGCAGCACTGACCGTGGTGTTGTTGTTGTaGGCACCCTTGACAGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: VKCYILHCFPVLGQAALTVVLLL*APLTEM Trigger: CATCTCTGTCAAGGGTGCCAACAACAACAACACCAC...GGTCAGTGCTGCCTGCCCCAGAACAGGAAAGCAGTGTAATATATAACATTTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS-3UTR CAA 90 bp | CCTCTCAACCCAATGGACTTGAATTTTGAAAGCTGTGATTTCCCAATCCCCTCCTTAGTGGTGTTGTTGTaGTTGGCACCCTTGACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PLNPMDLNFESCDFPIPSLVVLL*LAPLTE Trigger: CTCTGTCAAGGGTGCCAACAACAACAACACCACTAA...GGAGGGGATTGGGAAATCACAGCTTTCAAAATTCAAGTCCATTGGGTTGAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS-3UTR CAA 90 bp | TTTAAAGATAGACATGGCATTTGTAAGGGTGTGATGGGGGCACATACCACAGCAGGGTTAGTGGTGTTGTaGTTGTTGGCACCCTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: FKDRHGICKGVMGAHTTAGLVVL*LLAPLT Trigger: TGTCAAGGGTGCCAACAACAACAACACCACTAACCC...TGCTGTGGTATGTGCCCCCATCACACCCTTACAAATGCCATGTCTATCTTTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS-3UTR CAA 90 bp | TTTAAAGATAGACATGGCATTTGTAAGGGTGTGATGGGGGCACATACCACAGCAAATCGAAGCAGTTCCTaGTGTTGCCGAGACACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: FKDRHGICKGVMGAHTTANRSSS*CCRDTK Trigger: CTTTGTGTCTCGGCAACACAAGGAACTGCTTCGATT...TGCTGTGGTATGTGCCCCCATCACACCCTTACAAATGCCATGTCTATCTTTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS-3UTR CAA 90 bp | ACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAATATTGTCCATCACTTGTTGTTGGCACCCTaGACAGAGATGCCATCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TTASLVVSISTLGNIVHHLLLAP*TEMPSL Trigger: CAAGGATGGCATCTCTGTCAAGGGTGCCAACAACAA...GTGATGGACAATATTTCCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR CAA 90 bp | GTTAAATGTTATATATTACACTGCTTTCCTGTTCTGGGGCAGGCAGCACTGACCTTAGTGGTGTTGTTGTaGTTGGCACCCTTGACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VKCYILHCFPVLGQAALTLVVLL*LAPLTE Trigger: CTCTGTCAAGGGTGCCAACAACAACAACACCACTAA...GGTCAGTGCTGCCTGCCCCAGAACAGGAAAGCAGTGTAATATATAACATTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS-3UTR CAA 90 bp | ACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAATATTGTCCATCACGGGTTAGTGGTGTTGTaGTTGTTGGCACCCTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: TTASLVVSISTLGNIVHHGLVVL*LLAPLT Trigger: TGTCAAGGGTGCCAACAACAACAACACCACTAACCC...GTGATGGACAATATTTCCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS-3UTR CAA 90 bp | AGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAATATTGTCCATCACGTTGGCCGATGCGAGATATCTaGTCGATCTTCTTGGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SKLSCVHFYSGKYCPSRWPMRDI*SIFLAL Trigger: GAGAGCCAAGAAGATCGACAAGATATCTCGCATCGG...CCAACGTGATGGACAATATTTCCCAGAGTAGAAATGGACACAACTAAGCTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR CAA 90 bp | AGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAATATTGTCCATCACGTTGGTTAGTGGTGTTGTTGTaGTTGGCACCCTTGACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SKLSCVHFYSGKYCPSRWLVVLL*LAPLTE Trigger: CTCTGTCAAGGGTGCCAACAACAACAACACCACTAA...CCAACGTGATGGACAATATTTCCCAGAGTAGAAATGGACACAACTAAGCTTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS-3UTR CAA 90 bp | GTTAAATGTTATATATTACACTGCTTTCCTGTTCTGGGGCAGGCAGCACTGACCATCTTGTCGATCTTCTaGGCTCTCTGGATGAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: VKCYILHCFPVLGQAALTILSIF*ALWMKS Trigger: ACTCTTCATCCAGAGAGCCAAGAAGATCGACAAGAT...GGTCAGTGCTGCCTGCCCCAGAACAGGAAAGCAGTGTAATATATAACATTTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR CAA 90 bp | GCTGATTTAAGAGACGTATCTTTTGTTCTTGTGGGTTTTGCATTAATGTTAAGCCACCTGCACAGCTCCTaGCTCCTGCCACTCAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: ADLRDVSFVLVGFALMLSHLHSS*LLPLKD Trigger: ATCTTTGAGTGGCAGGAGCAAGGAGCTGTGCAGGTG...GCTTAACATTAATGCAAAACCCACAAGAACAAAAGATACGTCTCTTAAATCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR CAA 90 bp | ATTTCTACTCTGGGAAATATTGTCCATCACGTTGGGGACTTTAAGAGTTTAAGCTTGTTGTTGGCACCCTaGACAGAGATGCCATCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ISTLGNIVHHVGDFKSLSLLLAP*TEMPSL Trigger: CAAGGATGGCATCTCTGTCAAGGGTGCCAACAACAA...GCTTAAACTCTTAAAGTCCCCAACGTGATGGACAATATTTCCCAGAGTAGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR CAA 90 bp | ACCACAGCAAGCTTAGTTGTGTCCATTTCTACTCTGGGAAATATTGTCCATCACATCTTGTCGATCTTCTaGGCTCTCTGGATGAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: TTASLVVSISTLGNIVHHILSIF*ALWMKS Trigger: ACTCTTCATCCAGAGAGCCAAGAAGATCGACAAGAT...GTGATGGACAATATTTCCCAGAGTAGAAATGGACACAACTAAGCTTGCTGTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR CAA 90 bp | ATTTCTACTCTGGGAAATATTGTCCATCACGTTGGGGACTTTAAGAGTTTAAGCAATCGAAGCAGTTCCTaGTGTTGCCGAGACACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ISTLGNIVHHVGDFKSLSNRSSS*CCRDTK Trigger: CTTTGTGTCTCGGCAACACAAGGAACTGCTTCGATT...GCTTAAACTCTTAAAGTCCCCAACGTGATGGACAATATTTCCCAGAGTAGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR CAA 90 bp | GCTGATTTAAGAGACGTATCTTTTGTTCTTGTGGGTTTTGCATTAATGTTAAGCGTGGTGTTGTTGTTGTaGGCACCCTTGACAGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: ADLRDVSFVLVGFALMLSVVLLL*APLTEM Trigger: CATCTCTGTCAAGGGTGCCAACAACAACAACACCAC...GCTTAACATTAATGCAAAACCCACAAGAACAAAAGATACGTCTCTTAAATCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR CAA 90 bp | GCTGATTTAAGAGACGTATCTTTTGTTCTTGTGGGTTTTGCATTAATGTTAAGCCCGATGCGAGATATCTaGTCGATCTTCTTGGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ADLRDVSFVLVGFALMLSPMRDI*SIFLAL Trigger: GAGAGCCAAGAAGATCGACAAGATATCTCGCATCGG...GCTTAACATTAATGCAAAACCCACAAGAACAAAAGATACGTCTCTTAAATCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR CAA 90 bp | GCTGATTTAAGAGACGTATCTTTTGTTCTTGTGGGTTTTGCATTAATGTTAAGCAAGCAGTTCCTTGTGTaGCCGAGACACAAAGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: ADLRDVSFVLVGFALMLSKQFLV*PRHKVD Trigger: GTCAACTTTGTGTCTCGGCAACACAAGGAACTGCTT...GCTTAACATTAATGCAAAACCCACAAGAACAAAAGATACGTCTCTTAAATCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS-3UTR CAA 90 bp | GCTGATTTAAGAGACGTATCTTTTGTTCTTGTGGGTTTTGCATTAATGTTAAGCATCTTGTCGATCTTCTaGGCTCTCTGGATGAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ADLRDVSFVLVGFALMLSILSIF*ALWMKS Trigger: ACTCTTCATCCAGAGAGCCAAGAAGATCGACAAGAT...GCTTAACATTAATGCAAAACCCACAAGAACAAAAGATACGTCTCTTAAATCAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
||
| CDS CAA 90 bp | GTCCTCCCCATGAGCTTATCCAGGAAGTCCGAGGGTGACATAGGCTaGGGTGCGGAGCGGGCGGCTTCAGCCTCTTTGGAAGCAGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: VLPMSLSRKSEGDIG*GAERAASASLEAAR Trigger: CCTTGCTGCTTCCAAAGAGGCTGAAGCCGCCCGCTCCGCACCCAAGCCTATGTCACCCTCGGACTTCCTGGATAAGCTCATGGGGAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 |
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| CDS CAA 90 bp | GATGGCGCAGGAGGCGGGTTAGTGGTGTTGTTGTTGTTGGCACCCTaGACAGAGATGCCATCCTTGGCCTGCAGACAGGCTGGGCCCATC | + |
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Preference number: 6 (lower is better) Translates to: DGAGGGLVVLLLLAP*TEMPSLACRQAGPI Trigger: GATGGGCCCAGCCTGTCTGCAGGCCAAGGATGGCATCTCTGTCAAGGGTGCCAACAACAACAACACCACTAACCCGCCTCCTGCGCCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS CAA 90 bp | GGGGACTTGGATGGCGCAGGAGGCGGGTTAGTGGTGTTGTTGTTGTaGGCACCCTTGACAGAGATGCCATCCTTGGCCTGCAGACAGGCT | + |
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Preference number: 6 (lower is better) Translates to: GDLDGAGGGLVVLLL*APLTEMPSLACRQA Trigger: AGCCTGTCTGCAGGCCAAGGATGGCATCTCTGTCAAGGGTGCCAACAACAACAACACCACTAACCCGCCTCCTGCGCCATCCAAGTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS CAA 90 bp | TCCGGGGACTTGGATGGCGCAGGAGGCGGGTTAGTGGTGTTGTTGTaGTTGGCACCCTTGACAGAGATGCCATCCTTGGCCTGCAGACAG | + |
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Preference number: 6 (lower is better) Translates to: SGDLDGAGGGLVVLL*LAPLTEMPSLACRQ Trigger: CTGTCTGCAGGCCAAGGATGGCATCTCTGTCAAGGGTGCCAACAACAACAACACCACTAACCCGCCTCCTGCGCCATCCAAGTCCCCGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS CAA 90 bp | TCCTCCGGGGACTTGGATGGCGCAGGAGGCGGGTTAGTGGTGTTGTaGTTGTTGGCACCCTTGACAGAGATGCCATCCTTGGCCTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SSGDLDGAGGGLVVL*LLAPLTEMPSLACR Trigger: TCTGCAGGCCAAGGATGGCATCTCTGTCAAGGGTGCCAACAACAACAACACCACTAACCCGCCTCCTGCGCCATCCAAGTCCCCGGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS CAA 90 bp | ATCTCCTCCGGGGACTTGGATGGCGCAGGAGGCGGGTTAGTGGTGTaGTTGTTGTTGGCACCCTTGACAGAGATGCCATCCTTGGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: ISSGDLDGAGGGLVV*LLLAPLTEMPSLAC Trigger: GCAGGCCAAGGATGGCATCTCTGTCAAGGGTGCCAACAACAACAACACCACTAACCCGCCTCCTGCGCCATCCAAGTCCCCGGAGGAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS GCA 72 bp | GGCAGGGTCAGTCCGTCTGCCACCTGCACAGCTCCTTaGTCCTGCCACTCAAAGATGAGGTCGTTCATGGTA | + |
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Preference number: 6 (lower is better) Translates to: GRVSPSATCTAP*SCHSKMRSFMV Trigger: TACCATGAACGACCTCATCTTTGAGTGGCAGGAGCAAGGAGCTGTGCAGGTGGCAGACGGACTGACCCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS CAA 72 bp | ATGAGCTTATCCAGGAAGTCCGAGGGTGACATAGGCTaGGGTGCGGAGCGGGCGGCTTCAGCCTCTTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: MSLSRKSEGDIG*GAERAASASLE Trigger: TTCCAAAGAGGCTGAAGCCGCCCGCTCCGCACCCAAGCCTATGTCACCCTCGGACTTCCTGGATAAGCTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 |
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| CDS CAA 72 bp | GATGGCGCAGGAGGCGGGTTAGTGGTGTTGTTGTTGTaGGCACCCTTGACAGAGATGCCATCCTTGGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: DGAGGGLVVLLL*APLTEMPSLAC Trigger: GCAGGCCAAGGATGGCATCTCTGTCAAGGGTGCCAACAACAACAACACCACTAACCCGCCTCCTGCGCCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS CAA 72 bp | ATAGGCTTGGGTGCGGAGCGGGCGGCTTCAGCCTCTTaGGAAGCAGCAAGGCTGAAGAATACAATGGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: IGLGAERAASAS*EAARLKNTMVS Trigger: GGAGACCATTGTATTCTTCAGCCTTGCTGCTTCCAAAGAGGCTGAAGCCGCCCGCTCCGCACCCAAGCCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 |
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| CDS CAA 72 bp | GGAGGCGGGTTAGTGGTGTTGTTGTTGTTGGCACCCTaGACAGAGATGCCATCCTTGGCCTGCAGACAGGCT | + |
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Preference number: 6 (lower is better) Translates to: GGGLVVLLLLAP*TEMPSLACRQA Trigger: AGCCTGTCTGCAGGCCAAGGATGGCATCTCTGTCAAGGGTGCCAACAACAACAACACCACTAACCCGCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS CAA 72 bp | TTGGATGGCGCAGGAGGCGGGTTAGTGGTGTTGTTGTaGTTGGCACCCTTGACAGAGATGCCATCCTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: LDGAGGGLVVLL*LAPLTEMPSLA Trigger: GGCCAAGGATGGCATCTCTGTCAAGGGTGCCAACAACAACAACACCACTAACCCGCCTCCTGCGCCATCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS GCA 72 bp | CGCCTCTTCCTCCTAAATCGAAGCAGTTCCTTGTGTTaGCGAGACACAAAGTTGACGGCGGCGTACTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: RLFLLNRSSSLC*RDTKLTAAYSS Trigger: GCTGGAGTACGCCGCCGTCAACTTTGTGTCTCGGCAACACAAGGAACTGCTTCGATTTAGGAGGAAGAGGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS CCA 72 bp | GATGAAGAGTTTCCGCATCTCCTCCGGGGACTTGGATaGCGCAGGAGGCGGGTTAGTGGTGTTGTTGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: DEEFPHLLRGLG*RRRRVSGVVVV Trigger: AACAACAACAACACCACTAACCCGCCTCCTGCGCCATCCAAGTCCCCGGAGGAGATGCGGAAACTCTTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS CAA 72 bp | GACTTGGATGGCGCAGGAGGCGGGTTAGTGGTGTTGTaGTTGTTGGCACCCTTGACAGAGATGCCATCCTTG | + |
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Preference number: 6 (lower is better) Translates to: DLDGAGGGLVVL*LLAPLTEMPSL Trigger: CAAGGATGGCATCTCTGTCAAGGGTGCCAACAACAACAACACCACTAACCCGCCTCCTGCGCCATCCAAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS CAA 90 bp | CTTGTGATGTCGCCTCTTCCTCCTAAATCGAAGCAGTTCCTTGTGTaGCCGAGACACAAAGTTGACGGCGGCGTACTCCAGCAGGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: LVMSPLPPKSKQFLV*PRHKVDGGVLQQGR Trigger: TCTGCCCTGCTGGAGTACGCCGCCGTCAACTTTGTGTCTCGGCAACACAAGGAACTGCTTCGATTTAGGAGGAAGAGGCGACATCACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS GCA 72 bp | TTCCTTCAGAATAAACTGAGGCAGGGTCAGTCCGTCTaGCACCTGCACAGCTCCTTGCTCCTGCCACTCAAA | + |
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Preference number: 6 (lower is better) Translates to: FLQNKLRQGQSV*HLHSSLLLPLK Trigger: TTTGAGTGGCAGGAGCAAGGAGCTGTGCAGGTGGCAGACGGACTGACCCTGCCTCAGTTTATTCTGAAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS CAA 72 bp | TCGCCTCTTCCTCCTAAATCGAAGCAGTTCCTTGTGTaGCCGAGACACAAAGTTGACGGCGGCGTACTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SPLPPKSKQFLV*PRHKVDGGVLQ Trigger: CTGGAGTACGCCGCCGTCAACTTTGTGTCTCGGCAACACAAGGAACTGCTTCGATTTAGGAGGAAGAGGCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS CAA 90 bp | AGGAAGGCCATGGGGAAACCGATGCGAGATATCTTGTCGATCTTCTaGGCTCTCTGGATGAAGAGTTTCCGCATCTCCTCCGGGGACTTG | + |
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Preference number: 6 (lower is better) Translates to: RKAMGKPMRDILSIF*ALWMKSFRISSGDL Trigger: CAAGTCCCCGGAGGAGATGCGGAAACTCTTCATCCAGAGAGCCAAGAAGATCGACAAGATATCTCGCATCGGTTTCCCCATGGCCTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS CCA 72 bp | CCGATGCGAGATATCTTGTCGATCTTCTTGGCTCTCTaGATGAAGAGTTTCCGCATCTCCTCCGGGGACTTG | + |
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Preference number: 6 (lower is better) Translates to: PMRDILSIFLAL*MKSFRISSGDL Trigger: CAAGTCCCCGGAGGAGATGCGGAAACTCTTCATCCAGAGAGCCAAGAAGATCGACAAGATATCTCGCATCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS CAA 72 bp | AGGACATTGCCATTCCGGGAGATTCTTAGCAGTTTGTaGTCCGTGGTGATTTCGTGGAAGTGGGCCCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: RTLPFREILSSL*SVVISWKWAPF Trigger: GAAGGGGGCCCACTTCCACGAAATCACCACGGACAACAAACTGCTAAGAATCTCCCGGAATGGCAATGTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS TCA 72 bp | TGCGAGATATCTTGTCGATCTTCTTGGCTCTCTGGATaGAGAGTTTCCGCATCTCCTCCGGGGACTTGGATG | + |
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Preference number: 6 (lower is better) Translates to: CEISCRSSWLSG*RVSASPPGTWM Trigger: CATCCAAGTCCCCGGAGGAGATGCGGAAACTCTTCATCCAGAGAGCCAAGAAGATCGACAAGATATCTCGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS CAA 72 bp | ATGGGGAAACCGATGCGAGATATCTTGTCGATCTTCTaGGCTCTCTGGATGAAGAGTTTCCGCATCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: MGKPMRDILSIF*ALWMKSFRISS Trigger: GGAGGAGATGCGGAAACTCTTCATCCAGAGAGCCAAGAAGATCGACAAGATATCTCGCATCGGTTTCCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS CAA 72 bp | ATGTTGCAACTTACATTCACAGGAGGACCTTTAAAGTaGGGCCTGATCCTGGCGTCATACCCAGAAGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: MLQLTFTGGPLK*GLILASYPEVL Trigger: GAGGACTTCTGGGTATGACGCCAGGATCAGGCCCAACTTTAAAGGTCCTCCTGTGAATGTAAGTTGCAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 |
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| CDS CAA 72 bp | ATGAGGAAGGCCATGGGGAAACCGATGCGAGATATCTaGTCGATCTTCTTGGCTCTCTGGATGAAGAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: MRKAMGKPMRDI*SIFLALWMKSF Trigger: GAAACTCTTCATCCAGAGAGCCAAGAAGATCGACAAGATATCTCGCATCGGTTTCCCCATGGCCTTCCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS GCA 72 bp | ATGAGGTCGTTCATGGTATATCCAAAGCTTTCGAGTTaGATGATACACGTCTGTACATCCATCGGGAAATTC | + |
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Preference number: 6 (lower is better) Translates to: MRSFMVYPKLSS*MIHVCTSIGKF Trigger: GAATTTCCCGATGGATGTACAGACGTGTATCATGCAACTCGAAAGCTTTGGATATACCATGAACGACCTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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| CDS CAA 72 bp | GATGAGGTCGTTCATGGTATATCCAAAGCTTTCGAGTaGCATGATACACGTCTGTACATCCATCGGGAAATT | + |
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Preference number: 6 (lower is better) Translates to: DEVVHGISKAFE*HDTRLYIHREI Trigger: AATTTCCCGATGGATGTACAGACGTGTATCATGCAACTCGAAAGCTTTGGATATACCATGAACGACCTCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075603.5 ENSMUST00000102716.10 ENSMUST00000108853.8 |
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