Pregenerated sensors for GLP2R (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049928Ensembl transcript IDs: ENSMUST00000021289.10, ENSMUST00000051765.9
Found 219 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | GAGAGGTGTCCATGGCATGCCCGGAGGCTCCTGGATCAGCGTGGCTaGGGGGACAGTTTCACTGTGCTCAGAACAGGGAAGAGGGTTCAT | + |
Preference number: 1 (lower is better) Translates to: ERCPWHARRLLDQRG*GDSFTVLRTGKRVH Trigger: ATGAACCCTCTTCCCTGTTCTGAGCACAGTGAAACTGTCCCCTCAGCCACGCTGATCCAGGAGCCTCCGGGCATGCCATGGACACCTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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3UTR CCA 90 bp | AGTGAGCAGGGTTTCTGCAAGCAGCAGCAGTTCCCTGGGCTGATCTaGAAAGGATCCGAGAGATACTGCCCGCCCGCTGATGTCTTGGGC | + |
Preference number: 1 (lower is better) Translates to: SEQGFCKQQQFPGLI*KGSERYCPPADVLG Trigger: GCCCAAGACATCAGCGGGCGGGCAGTATCTCTCGGATCCTTTCCAGATCAGCCCAGGGAACTGCTGCTGCTTGCAGAAACCCTGCTCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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3UTR GCA 90 bp | CACACCCTGTCCAAGGAGAGTGGTGTGCCCCAGATGAGCAGCAAATaGAGAGTAGCTGCTCCCTCCATCCTGCCTGGGTTTTACCAAGGG | + |
Preference number: 1 (lower is better) Translates to: HTLSKESGVPQMSSK*RVAAPSILPGFYQG Trigger: CCCTTGGTAAAACCCAGGCAGGATGGAGGGAGCAGCTACTCTGCATTTGCTGCTCATCTGGGGCACACCACTCTCCTTGGACAGGGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR TCA 90 bp | TTCACAGTGAGCAGGGTTTCTGCAAGCAGCAGCAGTTCCCTGGGCTaGTCTGGAAAGGATCCGAGAGATACTGCCCGCCCGCTGATGTCT | + |
Preference number: 1 (lower is better) Translates to: FTVSRVSASSSSSLG*SGKDPRDTARPLMS Trigger: AGACATCAGCGGGCGGGCAGTATCTCTCGGATCCTTTCCAGATCAGCCCAGGGAACTGCTGCTGCTTGCAGAAACCCTGCTCACTGTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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3UTR GCA 90 bp | CAAAGGCCCAATGAGCCTGGCAGCTATAGAGCCTGGGGCTTCTTATaGCACCTTCAGCAAGTCCACACTCAGACAGGGCTTCCCTCACCT | + |
Preference number: 1 (lower is better) Translates to: QRPNEPGSYRAWGFL*HLQQVHTQTGLPSP Trigger: AGGTGAGGGAAGCCCTGTCTGAGTGTGGACTTGCTGAAGGTGGCATAAGAAGCCCCAGGCTCTATAGCTGCCAGGCTCATTGGGCCTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR GCA 90 bp | ACAGGGAAGAGGGTTCATGAAGCCCTTCACAGTGAGCAGGGTTTCTaGAAGCAGCAGCAGTTCCCTGGGCTGATCTGGAAAGGATCCGAG | + |
Preference number: 1 (lower is better) Translates to: TGKRVHEALHSEQGF*KQQQFPGLIWKGSE Trigger: CTCGGATCCTTTCCAGATCAGCCCAGGGAACTGCTGCTGCTTGCAGAAACCCTGCTCACTGTGAAGGGCTTCATGAACCCTCTTCCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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3UTR GCA 90 bp | CAAGGAGAGTGGTGTGCCCCAGATGAGCAGCAAATGCAGAGTAGCTaGTCCCTCCATCCTGCCTGGGTTTTACCAAGGGTGAGGAGTTTC | + |
Preference number: 1 (lower is better) Translates to: QGEWCAPDEQQMQSS*SLHPAWVLPRVRSF Trigger: GAAACTCCTCACCCTTGGTAAAACCCAGGCAGGATGGAGGGAGCAGCTACTCTGCATTTGCTGCTCATCTGGGGCACACCACTCTCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CCA 90 bp | CCAGATGAGCAGCAAATGCAGAGTAGCTGCTCCCTCCATCCTGCCTaGGTTTTACCAAGGGTGAGGAGTTTCCGCAAATGCTTGTCCAAC | + |
Preference number: 1 (lower is better) Translates to: PDEQQMQSSCSLHPA*VLPRVRSFRKCLSN Trigger: GTTGGACAAGCATTTGCGGAAACTCCTCACCCTTGGTAAAACCCAGGCAGGATGGAGGGAGCAGCTACTCTGCATTTGCTGCTCATCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR TCA 90 bp | AGCCTAATGGACAGCCTGGCTGCCTCCCCACCAGACCACAGCTTTTaGTTCCAAGGAATACCTCCTCCCAGAAGATTCTGTTGCAATGAC | + |
Preference number: 1 (lower is better) Translates to: SLMDSLAASPPDHSF*FQGIPPPRRFCCND Trigger: GTCATTGCAACAGAATCTTCTGGGAGGAGGTATTCCTTGGAATCAAAAGCTGTGGTCTGGTGGGGAGGCAGCCAGGCTGTCCATTAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR TCA 90 bp | CATTTGCAGAGAGGCTTACCTAAGCAACAGCATCTATCTGCTGCCTaGCTTCCTGGTTTGCCCAGGTTTGCCACCAGCCTAATGGACAGC | + |
Preference number: 1 (lower is better) Translates to: HLQRGLPKQQHLSAA*LPGLPRFATSLMDS Trigger: GCTGTCCATTAGGCTGGTGGCAAACCTGGGCAAACCAGGAAGTCAGGCAGCAGATAGATGCTGTTGCTTAGGTAAGCCTCTCTGCAAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CCA 90 bp | ACTCTATCTGCTTTCTTACATAACCCAGGACCACCTGCTAGTGGATaGCACCACCCACAGTGGGATGGACTCTTCCACATCAGCCATGAA | + |
Preference number: 1 (lower is better) Translates to: TLSAFLHNPGPPASG*HHPQWDGLFHISHE Trigger: TTCATGGCTGATGTGGAAGAGTCCATCCCACTGTGGGTGGTGCCATCCACTAGCAGGTGGTCCTGGGTTATGTAAGAAAGCAGATAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CCA 90 bp | GCTTCCTCTTGTCTTGTGACTTGTGTAACTGAGCCTGGCCTTGACTaGTTGTCCCTCTTCAGCCTCTGTAGGTCAGGTCAAATCCAGCTT | + |
Preference number: 1 (lower is better) Translates to: ASSCLVTCVTEPGLD*LSLFSLCRSGQIQL Trigger: AAGCTGGATTTGACCTGACCTACAGAGGCTGAAGAGGGACAACCAGTCAAGGCCAGGCTCAGTTACACAAGTCACAAGACAAGAGGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CCA 90 bp | CTTATTTTATCATTGAGATTATCAGAGGTGACTGACCACCGTCAGTaGCTCACCCTTGTCCTGGTGACTGACCACCATCAGTGGCTCACC | + |
Preference number: 1 (lower is better) Translates to: LILSLRLSEVTDHRQ*LTLVLVTDHHQWLT Trigger: GGTGAGCCACTGATGGTGGTCAGTCACCAGGACAAGGGTGAGCCACTGACGGTGGTCAGTCACCTCTGATAATCTCAATGATAAAATAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR TCA 90 bp | AGACAGGGCTTCCCTCACCTTATTCCCTCACCTGGGCTTTACTACTaGTGTAGGATGAAGAATGGATTAGCCTCCTGGAGCAGGAAATCT | + |
Preference number: 1 (lower is better) Translates to: RQGFPHLIPSPGLYY*CRMKNGLASWSRKS Trigger: AGATTTCCTGCTCCAGGAGGCTAATCCATTCTTCATCCTACATCAGTAGTAAAGCCCAGGTGAGGGAATAAGGTGAGGGAAGCCCTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR GCA 90 bp | CATGGCCAGGCTTGTCCCAACAGTAGCCCACTCTCTACTACCAATTaGTGTCCTGGTCTCCTTTCTTTTGCCATGATAAACATCACGACT | + |
Preference number: 1 (lower is better) Translates to: HGQACPNSSPLSTTN*CPGLLSFAMINITT Trigger: AGTCGTGATGTTTATCATGGCAAAAGAAAGGAGACCAGGACAGCAATTGGTAGTAGAGAGTGGGCTACTGTTGGGACAAGCCTGGCCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR GCA 90 bp | CTCCATCCTGCCTGGGTTTTACCAAGGGTGAGGAGTTTCCGCAAATaGTTGTCCAACTCTTTCAATTCTTGGTCCTCATCTCAGACTTTC | + |
Preference number: 1 (lower is better) Translates to: LHPAWVLPRVRSFRK*LSNSFNSWSSSQTF Trigger: GAAAGTCTGAGATGAGGACCAAGAATTGAAAGAGTTGGACAAGCATTTGCGGAAACTCCTCACCCTTGGTAAAACCCAGGCAGGATGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CCA 90 bp | TTTGAGCCAATGAGTCACTCAGCCCGTTTATCCCAGAGAAAGGCGTaGTTGGGCTTGCTCTTTTGGGTGATTTCCTTGCTTTTCCATCAA | + |
Preference number: 1 (lower is better) Translates to: FEPMSHSARLSQRKA*LGLLFWVISLLFHQ Trigger: TTGATGGAAAAGCAAGGAAATCACCCAAAAGAGCAAGCCCAACCACGCCTTTCTCTGGGATAAACGGGCTGAGTGACTCATTGGCTCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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3UTR CCA 90 bp | CTTGATAACCCAGAAGAGACTTCACATCAAAATGGGGATAGTGAATaGAAAGAGGAGGACCCTGGGCTCAGCAACCTCTTTCCTAGGGAT | + |
Preference number: 1 (lower is better) Translates to: LDNPEETSHQNGDSE*KEEDPGLSNLFPRD Trigger: ATCCCTAGGAAAGAGGTTGCTGAGCCCAGGGTCCTCCTCTTTCCATTCACTATCCCCATTTTGATGTGAAGTCTCTTCTGGGTTATCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CCA 90 bp | TCAGCCCGTTTATCCCAGAGAAAGGCGTGGTTGGGCTTGCTCTTTTaGGTGATTTCCTTGCTTTTCCATCAAGATGGAGCATTAAGAGAA | + |
Preference number: 1 (lower is better) Translates to: SARLSQRKAWLGLLF*VISLLFHQDGALRE Trigger: TTCTCTTAATGCTCCATCTTGATGGAAAAGCAAGGAAATCACCCAAAAGAGCAAGCCCAACCACGCCTTTCTCTGGGATAAACGGGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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3UTR TCA 90 bp | CAGTTTAGATCCTTCCTCCCAGAGATGTTTAGGTTTGTGTCAAGTTaGCAAAAGCTTGCCCACATGCCCACAACACTAACATTGGCCTCA | + |
Preference number: 1 (lower is better) Translates to: QFRSFLPEMFRFVSS*QKLAHMPTTLTLAS Trigger: TGAGGCCAATGTTAGTGTTGTGGGCATGTGGGCAAGCTTTTGTCAACTTGACACAAACCTAAACATCTCTGGGAGGAAGGATCTAAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR GCA 90 bp | TTGGCAGCTCTGTTTGAGAAGTCTCAAAGCAGTATTTCTGTCTACTaGAGCATACTTCACCATGGACACATACCCAACCCAGACAGCATA | + |
Preference number: 1 (lower is better) Translates to: LAALFEKSQSSISVY*SILHHGHIPNPDSI Trigger: TATGCTGTCTGGGTTGGGTATGTGTCCATGGTGAAGTATGCTGCAGTAGACAGAAATACTGCTTTGAGACTTCTCAAACAGAGCTGCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CCA 90 bp | GTAAAGACAGAGTGTGAACTCCAGGAGGAGCAGAGGCAAGAACTATaGAGGAATGCTTTTTACTGGCTTGTTCATCATGGCTCACTCTAT | + |
Preference number: 1 (lower is better) Translates to: VKTECELQEEQRQEL*RNAFYWLVHHGSLY Trigger: ATAGAGTGAGCCATGATGAACAAGCCAGTAAAAAGCATTCCTCCATAGTTCTTGCCTCTGCTCCTCCTGGAGTTCACACTCTGTCTTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CCA 90 bp | AGGGTGAGGAGTTTCCGCAAATGCTTGTCCAACTCTTTCAATTCTTaGTCCTCATCTCAGACTTTCTCTCTTAGAATATTTGCTGTGATT | + |
Preference number: 1 (lower is better) Translates to: RVRSFRKCLSNSFNS*SSSQTFSLRIFAVI Trigger: AATCACAGCAAATATTCTAAGAGAGAAAGTCTGAGATGAGGACCAAGAATTGAAAGAGTTGGACAAGCATTTGCGGAAACTCCTCACCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR-3UTR GCA 90 bp | CCACTGGGAAGCCTCTGTAGGGTGTGCGTGATGGCGGTCTCCCTGTCGGGAGAGGGGACAGTTTCACTGTaGTCAGAACAGGGAAGAGGG | + |
Preference number: 2 (lower is better) Translates to: PLGSLCRVCVMAVSLSGEGTVSL*SEQGRG Trigger: CCCTCTTCCCTGTTCTGAGCACAGTGAAACTGTCCC...CTCTCCCGACAGGGAGACCGCCATCACGCACACCCTACAGAGGCTTCCCAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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3UTR-3UTR CCA 90 bp | CCACTGGGAAGCCTCTGTAGGGTGTGCGTGATGGCGGTCTCCCTGTCGGGAGAGCGCCCGCTGATGTCTTaGGCTTTTGTTTCTTCCCAG | + |
Preference number: 2 (lower is better) Translates to: PLGSLCRVCVMAVSLSGERPLMS*AFVSSQ Trigger: CTGGGAAGAAACAAAAGCCCAAGACATCAGCGGGCG...CTCTCCCGACAGGGAGACCGCCATCACGCACACCCTACAGAGGCTTCCCAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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3UTR-3UTR TCA 90 bp | GAGAGATACTGCCCGCCCGCTGATGTCTTGGGCTTTTGTTTCTTCCCAGGCGGACACGGTGGCTGGCTTTaGACTGCTGCTGCAGAAGCA | + |
Preference number: 2 (lower is better) Translates to: ERYCPPADVLGFCFFPGGHGGWL*TAAAEA Trigger: TGCTTCTGCAGCAGCAGTTCAAAGCCAGCCACCGTG...TCCGCCTGGGAAGAAACAAAAGCCCAAGACATCAGCGGGCGGGCAGTATCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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3UTR-3UTR GCA 90 bp | CTGAGCCTGGCCTTGACTGGTTGTCCCTCTTCAGCCTCTGTAGGTCAGGTCAAAAATGGACAGCCTGGCTaGCTCCCCACCAGACCACAG | + |
Preference number: 2 (lower is better) Translates to: LSLALTGCPSSASVGQVKNGQPG*LPTRPQ Trigger: CTGTGGTCTGGTGGGGAGGCAGCCAGGCTGTCCATT...TTTGACCTGACCTACAGAGGCTGAAGAGGGACAACCAGTCAAGGCCAGGCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR-3UTR GCA 90 bp | CTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCTTCCCTGCCCTGGTGCCTAGGGATCCTCAGTTaGCAAGCTGTGGTGATGGAC | + |
Preference number: 2 (lower is better) Translates to: LCRHSGASSSAHSSLPWCLGILS*QAVVMD Trigger: GTCCATCACCACAGCTTGGCAACTGAGGATCCCTAG...GCACCAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CAA 90 bp | CTGATCTGGAAAGGATCCGAGAGATACTGCCCGCCCGCTGATGTCTaGGGCTTTTGTTTCTTCCCAGGCGGACAAGAAGGACCCACAAGG | + |
Preference number: 2 (lower is better) Translates to: LIWKGSERYCPPADV*GFCFFPGGQEGPTR Trigger: CCTTGTGGGTCCTTCTTGTCCGCCTGGGAAGAAACAAAAGCCCAAGACATCAGCGGGCGGGCAGTATCTCTCGGATCCTTTCCAGATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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3UTR-3UTR TCA 90 bp | GCCACCTTCAGCAAGTCCACACTCAGACAGGGCTTCCCTCACCTTATTCCCTCACTGGAGCAGGAAATCTaGCCATCAAAGGGTCAGTGG | + |
Preference number: 2 (lower is better) Translates to: ATFSKSTLRQGFPHLIPSLEQEI*PSKGQW Trigger: CCACTGACCCTTTGATGGTCAGATTTCCTGCTCCAG...TGAGGGAATAAGGTGAGGGAAGCCCTGTCTGAGTGTGGACTTGCTGAAGGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR-3UTR CCA 90 bp | CTGCAGCATACTTCACCATGGACACATACCCAACCCAGACAGCATACCCCACCAGAAAGAGGAGGACCCTaGGCTCAGCAACCTCTTTCC | + |
Preference number: 2 (lower is better) Translates to: LQHTSPWTHTQPRQHTPPERGGP*AQQPLS Trigger: GGAAAGAGGTTGCTGAGCCCAGGGTCCTCCTCTTTC...TGGTGGGGTATGCTGTCTGGGTTGGGTATGTGTCCATGGTGAAGTATGCTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR-3UTR TCA 90 bp | CATTCTGGGGCTTCATCTTCTGCACACTCTTCCCTGCCCTGGTGCCAACATCCTGGGTTTTACCAAGGGTaGGGAGTTTCCGCAAATGCT | + |
Preference number: 2 (lower is better) Translates to: HSGASSSAHSSLPWCQHPGFYQG*GVSANA Trigger: AGCATTTGCGGAAACTCCTCACCCTTGGTAAAACCC...AGGATGTTGGCACCAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCCAGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR-3UTR GCA 90 bp | TCTTGGGCTTTTGTTTCTTCCCAGGCGGACAAGAAGGACCCACAAGGCAATGGCTGGCTGGCTTTGAACTaGTGCTGCAGAAGCAACTGG | + |
Preference number: 2 (lower is better) Translates to: SWAFVSSQADKKDPQGNGWLALN*CCRSNW Trigger: CCAGTTGCTTCTGCAGCAGCAGTTCAAAGCCAGCCA...GCCATTGCCTTGTGGGTCCTTCTTGTCCGCCTGGGAAGAAACAAAAGCCCAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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3UTR-3UTR GCA 90 bp | CATTCTGGGGCTTCATCTTCTGCACACTCTTCCCTGCCCTGGTGCCAACATCCTCTCCCTCAGTCACCTTaGTTCCTCTTGTCTTGTGAC | + |
Preference number: 2 (lower is better) Translates to: HSGASSSAHSSLPWCQHPLPQSP*FLLSCD Trigger: GTCACAAGACAAGAGGAAGCAAGGTGACTGAGGGAG...AGGATGTTGGCACCAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCCAGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR-3UTR TCA 90 bp | AGAGTCATTGGAGCACACTGCTCTTGCTGGTCTGCCTTTGAGCCAATGAGTCACATACTGCCCGCCCGCTaGTGTCTTGGGCTTTTGTTT | + |
Preference number: 2 (lower is better) Translates to: RVIGAHCSCWSAFEPMSHILPAR*CLGLLF Trigger: AAACAAAAGCCCAAGACATCAGCGGGCGGGCAGTAT...GTGACTCATTGGCTCAAAGGCAGACCAGCAAGAGCAGTGTGCTCCAATGACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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3UTR-3UTR TCA 90 bp | AGGGCATGGTTGAAATCTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCGTCTTTGCTTCCCTCTaGAAATCCACAAGCCAGCCC | + |
Preference number: 2 (lower is better) Translates to: RAWLKSMPAFWGFIFCTLVFASL*KSTSQP Trigger: GGGCTGGCTTGTGGATTTTCAGAGGGAAGCAAAGAC...GAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAGATTTCAACCATGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR-3UTR GCA 90 bp | CTGCAGCATACTTCACCATGGACACATACCCAACCCAGACAGCATACCCCACCAACAGCATCTATCTGCTaGCTGACTTCCTGGTTTGCC | + |
Preference number: 2 (lower is better) Translates to: LQHTSPWTHTQPRQHTPPTASIC*LTSWFA Trigger: GGCAAACCAGGAAGTCAGGCAGCAGATAGATGCTGT...TGGTGGGGTATGCTGTCTGGGTTGGGTATGTGTCCATGGTGAAGTATGCTGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR-3UTR CCA 90 bp | CTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCTTCCCTGCCCTGGTGCTACCAATTGCTGTCCTaGTCTCCTTTCTTTTGCCAT | + |
Preference number: 2 (lower is better) Translates to: LCRHSGASSSAHSSLPWCYQLLS*SPFFCH Trigger: ATGGCAAAAGAAAGGAGACCAGGACAGCAATTGGTA...GCACCAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR-3UTR TCA 90 bp | GCCACCTTCAGCAAGTCCACACTCAGACAGGGCTTCCCTCACCTTATTCCCTCACTTCCACATCAGCCATaGATCAAGAAAATGCTCCCA | + |
Preference number: 2 (lower is better) Translates to: ATFSKSTLRQGFPHLIPSLPHQP*IKKMLP Trigger: TGGGAGCATTTTCTTGATTCATGGCTGATGTGGAAG...TGAGGGAATAAGGTGAGGGAAGCCCTGTCTGAGTGTGGACTTGCTGAAGGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR-3UTR CCA 90 bp | GGCTGCCTCCCCACCAGACCACAGCTTTTGATTCCAAGGAATACCTCCTCCCAGCAGAGGCAAGAACTATaGAGGAATGCTTTTTACTGG | + |
Preference number: 2 (lower is better) Translates to: GCLPTRPQLLIPRNTSSQQRQEL*RNAFYW Trigger: CCAGTAAAAAGCATTCCTCCATAGTTCTTGCCTCTG...CTGGGAGGAGGTATTCCTTGGAATCAAAAGCTGTGGTCTGGTGGGGAGGCAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR-3UTR CCA 90 bp | GCCACCTTCAGCAAGTCCACACTCAGACAGGGCTTCCCTCACCTTATTCCCTCATGCTCTCTTATCAAGTaGAATTGTCAGTCCCAGCTG | + |
Preference number: 2 (lower is better) Translates to: ATFSKSTLRQGFPHLIPSCSLIK*NCQSQL Trigger: CAGCTGGGACTGACAATTCCACTTGATAAGAGAGCA...TGAGGGAATAAGGTGAGGGAAGCCCTGTCTGAGTGTGGACTTGCTGAAGGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR-3UTR CCA 90 bp | AGGGCATGGTTGAAATCTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCCAGTATACCCAGCCATaGACACACATACACCTTGCC | + |
Preference number: 2 (lower is better) Translates to: RAWLKSMPAFWGFIFCTLQYTQP*THIHLA Trigger: GGCAAGGTGTATGTGTGTCCATGGCTGGGTATACTG...GAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAGATTTCAACCATGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR-3UTR TCA 90 bp | TCACTCCTTGCCAACTGCACAATGTTTCCACAAACAGTTCCTCCCTCAGTCACCAGTAAAGACAGAGTGTaGACTCCAGGAGGAGCAGAG | + |
Preference number: 2 (lower is better) Translates to: SLLANCTMFPQTVPPSVTSKDRV*TPGGAE Trigger: CTCTGCTCCTCCTGGAGTTCACACTCTGTCTTTACT...GGTGACTGAGGGAGGAACTGTTTGTGGAAACATTGTGCAGTTGGCAAGGAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR-3UTR TCA 90 bp | AGGGCATGGTTGAAATCTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCCCAGACCACAGCTTTTaGTTCCAAGGAATACCTCCT | + |
Preference number: 2 (lower is better) Translates to: RAWLKSMPAFWGFIFCTLPDHSF*FQGIPP Trigger: AGGAGGTATTCCTTGGAATCAAAAGCTGTGGTCTGG...GAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAGATTTCAACCATGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR-3UTR GCA 90 bp | AGGGCATGGTTGAAATCTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCGACCCAGAGAGTCTTTaGTTCCCTCTGAAAATCCAC | + |
Preference number: 2 (lower is better) Translates to: RAWLKSMPAFWGFIFCTLDPESL*FPLKIH Trigger: GTGGATTTTCAGAGGGAAGCAAAGACTCTCTGGGTC...GAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAGATTTCAACCATGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR-3UTR CCA 90 bp | TCACTCCTTGCCAACTGCACAATGTTTCCACAAACAGTTCCTCCCTCAGTCACCAATGGGGATAGTGAATaGAAAGAGGAGGACCCTGGG | + |
Preference number: 2 (lower is better) Translates to: SLLANCTMFPQTVPPSVTNGDSE*KEEDPG Trigger: CCCAGGGTCCTCCTCTTTCCATTCACTATCCCCATT...GGTGACTGAGGGAGGAACTGTTTGTGGAAACATTGTGCAGTTGGCAAGGAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR-3UTR TCA 90 bp | GCCACCTTCAGCAAGTCCACACTCAGACAGGGCTTCCCTCACCTTATTCCCTCATCACATTCCAATCACTaGGTAAAGACAGAGTGTGAA | + |
Preference number: 2 (lower is better) Translates to: ATFSKSTLRQGFPHLIPSSHSNH*VKTECE Trigger: TTCACACTCTGTCTTTACTCAGTGATTGGAATGTGA...TGAGGGAATAAGGTGAGGGAAGCCCTGTCTGAGTGTGGACTTGCTGAAGGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR-3UTR GCA 90 bp | ATAGAGCCTGGGGCTTCTTATGCCACCTTCAGCAAGTCCACACTCAGACAGGGCGTTGCTCCCTTAAATTaGTACTTGTTCAGCATTTGG | + |
Preference number: 2 (lower is better) Translates to: IEPGASYATFSKSTLRQGVAPLN*YLFSIW Trigger: CCAAATGCTGAACAAGTAGCAATTTAAGGGAGCAAC...GCCCTGTCTGAGTGTGGACTTGCTGAAGGTGGCATAAGAAGCCCCAGGCTCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
||
3UTR-3UTR GCA 90 bp | CATTCTGGGGCTTCATCTTCTGCACACTCTTCCCTGCCCTGGTGCCAACATCCTTGGTCTCCTTTCTTTTaGCATGATAAACATCACGAC | + |
Preference number: 2 (lower is better) Translates to: HSGASSSAHSSLPWCQHPWSPFF*HDKHHD Trigger: GTCGTGATGTTTATCATGGCAAAAGAAAGGAGACCA...AGGATGTTGGCACCAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCCAGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
||
3UTR-3UTR GCA 90 bp | CTGAGCCTGGCCTTGACTGGTTGTCCCTCTTCAGCCTCTGTAGGTCAGGTCAAACCCAGAAGATTCTGTTaGAATGACAATGCTCTCTTA | + |
Preference number: 2 (lower is better) Translates to: LSLALTGCPSSASVGQVKPRRFC*NDNALL Trigger: TAAGAGAGCATTGTCATTGCAACAGAATCTTCTGGG...TTTGACCTGACCTACAGAGGCTGAAGAGGGACAACCAGTCAAGGCCAGGCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
||
3UTR-3UTR CCA 90 bp | CATGATCATCCAGGCCTTTTCCTCTTCATAGAAACATCCTCTCACTCGCAGAGTATCTTCAGTGCCCACTaGGAAGCCTCTGTAGGGTGT | + |
Preference number: 2 (lower is better) Translates to: HDHPGLFLFIETSSHSQSIFSAH*EASVGC Trigger: ACACCCTACAGAGGCTTCCCAGTGGGCACTGAAGAT...ACTCTGCGAGTGAGAGGATGTTTCTATGAAGAGGAAAAGGCCTGGATGATCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
||
3UTR-3UTR CCA 90 bp | CTCCCCACCAGACCACAGCTTTTGATTCCAAGGAATACCTCCTCCCAGAAGATTAGGCAGGAGGGACTGTaGGCATTATATAGACTCACT | + |
Preference number: 2 (lower is better) Translates to: LPTRPQLLIPRNTSSQKIRQEGL*ALYRLT Trigger: AGTGAGTCTATATAATGCCCACAGTCCCTCCTGCCT...AATCTTCTGGGAGGAGGTATTCCTTGGAATCAAAAGCTGTGGTCTGGTGGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
||
3UTR-3UTR CCA 90 bp | AGGGCATGGTTGAAATCTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCCAGTATACCCAACCATaGACACATATCTCAACCAGG | + |
Preference number: 2 (lower is better) Translates to: RAWLKSMPAFWGFIFCTLQYTQP*THISTR Trigger: CCTGGTTGAGATATGTGTCCATGGTTGGGTATACTG...GAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAGATTTCAACCATGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
||
3UTR-3UTR GCA 90 bp | ACCCACAGTGGGATGGACTCTTCCACATCAGCCATGAATCAAGAAAATGCTCCCAAGTTGACAAAAGCTTaGCCACATGCCCACAACACT | + |
Preference number: 2 (lower is better) Translates to: THSGMDSSTSAMNQENAPKLTKA*PHAHNT Trigger: AGTGTTGTGGGCATGTGGGCAAGCTTTTGTCAACTT...GGGAGCATTTTCTTGATTCATGGCTGATGTGGAAGAGTCCATCCCACTGTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
||
3UTR-3UTR GCA 90 bp | TCACTCCTTGCCAACTGCACAATGTTTCCACAAACAGTTCCTCCCTCAGTCACCCATGAATCAAGAAAATaGTCCCACAGACCAGCCTAC | + |
Preference number: 2 (lower is better) Translates to: SLLANCTMFPQTVPPSVTHESRK*SHRPAY Trigger: GTAGGCTGGTCTGTGGGAGCATTTTCTTGATTCATG...GGTGACTGAGGGAGGAACTGTTTGTGGAAACATTGTGCAGTTGGCAAGGAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
||
3UTR-3UTR CCA 90 bp | CTCCCCACCAGACCACAGCTTTTGATTCCAAGGAATACCTCCTCCCAGAAGATTAACCAACGGACATTCTaGAAAATATGCATGGTGGGG | + |
Preference number: 2 (lower is better) Translates to: LPTRPQLLIPRNTSSQKINQRTF*KICMVG Trigger: CCCCACCATGCATATTTTCCAGAATGTCCGTTGGTT...AATCTTCTGGGAGGAGGTATTCCTTGGAATCAAAAGCTGTGGTCTGGTGGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
||
3UTR-3UTR CCA 90 bp | CCTGGTCTCCTTTCTTTTGCCATGATAAACATCACGACTGAAAAACAAGTTGGGTCCCTCCATCCTGCCTaGGTTTTACCAAGGGTGAGG | + |
Preference number: 2 (lower is better) Translates to: PGLLSFAMINITTEKQVGSLHPA*VLPRVR Trigger: CCTCACCCTTGGTAAAACCCAGGCAGGATGGAGGGA...CCCAACTTGTTTTTCAGTCGTGATGTTTATCATGGCAAAAGAAAGGAGACCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
||
3UTR CAA 90 bp | CATCCTGCCTGGGTTTTACCAAGGGTGAGGAGTTTCCGCAAATGCTaGTCCAACTCTTTCAATTCTTGGTCCTCATCTCAGACTTTCTCT | + |
Preference number: 2 (lower is better) Translates to: HPAWVLPRVRSFRKC*SNSFNSWSSSQTFS Trigger: AGAGAAAGTCTGAGATGAGGACCAAGAATTGAAAGAGTTGGACAAGCATTTGCGGAAACTCCTCACCCTTGGTAAAACCCAGGCAGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
||
3UTR-3UTR GCA 90 bp | CTCCCCACCAGACCACAGCTTTTGATTCCAAGGAATACCTCCTCCCAGAAGATTAGGAGTTTCCGCAAATaGTTGTCCAACTCTTTCAAT | + |
Preference number: 2 (lower is better) Translates to: LPTRPQLLIPRNTSSQKIRSFRK*LSNSFN Trigger: ATTGAAAGAGTTGGACAAGCATTTGCGGAAACTCCT...AATCTTCTGGGAGGAGGTATTCCTTGGAATCAAAAGCTGTGGTCTGGTGGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
||
3UTR-3UTR TCA 90 bp | TCACGACTGAAAAACAAGTTGGGGAGGAAAGGGTTAATTTGGCTTACACTTCCAAAGGGAGATGAGACTTaGCAGAACAGGAAGAGAAGT | + |
Preference number: 2 (lower is better) Translates to: SRLKNKLGRKGLIWLTLPKGDET*QNRKRS Trigger: ACTTCTCTTCCTGTTCTGTCAAGTCTCATCTCCCTT...TGGAAGTGTAAGCCAAATTAACCCTTTCCTCCCCAACTTGTTTTTCAGTCGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR-3UTR TCA 90 bp | TCACGACTGAAAAACAAGTTGGGGAGGAAAGGGTTAATTTGGCTTACACTTCCAAGGTTTGTGTCAAGTTaGCAAAAGCTTGCCCACATG | + |
Preference number: 2 (lower is better) Translates to: SRLKNKLGRKGLIWLTLPRFVSS*QKLAHM Trigger: CATGTGGGCAAGCTTTTGTCAACTTGACACAAACCT...TGGAAGTGTAAGCCAAATTAACCCTTTCCTCCCCAACTTGTTTTTCAGTCGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
||
3UTR-3UTR CCA 90 bp | GGCAAGAACTATGGAGGAATGCTTTTTACTGGCTTGTTCATCATGGCTCACTCTAACTCTTTCAATTCTTaGTCCTCATCTCAGACTTTC | + |
Preference number: 2 (lower is better) Translates to: GKNYGGMLFTGLFIMAHSNSFNS*SSSQTF Trigger: GAAAGTCTGAGATGAGGACCAAGAATTGAAAGAGTT...AGAGTGAGCCATGATGAACAAGCCAGTAAAAAGCATTCCTCCATAGTTCTTGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CAA 90 bp | CTAAGTTCACATATAATGGAATGTCTTAAGTTTCCTTTGCTGAGCTaGGCAGCTCTGTTTGAGAAGTCTCAAAGCAGTATTTCTGTCTAC | + |
Preference number: 2 (lower is better) Translates to: LSSHIMECLKFPLLS*AALFEKSQSSISVY Trigger: GTAGACAGAAATACTGCTTTGAGACTTCTCAAACAGAGCTGCCAAGCTCAGCAAAGGAAACTTAAGACATTCCATTATATGTGAACTTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
||
3UTR CAA 90 bp | GGATACTGTCTAAGTTCACATATAATGGAATGTCTTAAGTTTCCTTaGCTGAGCTTGGCAGCTCTGTTTGAGAAGTCTCAAAGCAGTATT | + |
Preference number: 2 (lower is better) Translates to: GYCLSSHIMECLKFP*LSLAALFEKSQSSI Trigger: AATACTGCTTTGAGACTTCTCAAACAGAGCTGCCAAGCTCAGCAAAGGAAACTTAAGACATTCCATTATATGTGAACTTAGACAGTATCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
||
3UTR GCA 72 bp | ATGGCGGTCTCCCTGTCGGGAGAGGTGTCCATGGCATaGCCGGAGGCTCCTGGATCAGCGTGGCTGAGGGGA | + |
Preference number: 3 (lower is better) Translates to: MAVSLSGEVSMA*PEAPGSAWLRG Trigger: TCCCCTCAGCCACGCTGATCCAGGAGCCTCCGGGCATGCCATGGACACCTCTCCCGACAGGGAGACCGCCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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3UTR CCA 72 bp | GTCGGGAGAGGTGTCCATGGCATGCCCGGAGGCTCCTaGATCAGCGTGGCTGAGGGGACAGTTTCACTGTGC | + |
Preference number: 3 (lower is better) Translates to: VGRGVHGMPGGS*ISVAEGTVSLC Trigger: GCACAGTGAAACTGTCCCCTCAGCCACGCTGATCCAGGAGCCTCCGGGCATGCCATGGACACCTCTCCCGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
||
3UTR TCA 72 bp | TTCAGTGCCCACTGGGAAGCCTCTGTAGGGTGTGCGTaGTGGCGGTCTCCCTGTCGGGAGAGGTGTCCATGG | + |
Preference number: 3 (lower is better) Translates to: FSAHWEASVGCA*WRSPCRERCPW Trigger: CCATGGACACCTCTCCCGACAGGGAGACCGCCATCACGCACACCCTACAGAGGCTTCCCAGTGGGCACTGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
||
3UTR GCA 72 bp | CATCTTCAGTGCCCACTGGGAAGCCTCTGTAGGGTGTaGGTGATGGCGGTCTCCCTGTCGGGAGAGGTGTCC | + |
Preference number: 3 (lower is better) Translates to: HLQCPLGSLCRV*VMAVSLSGEVS Trigger: GGACACCTCTCCCGACAGGGAGACCGCCATCACGCACACCCTACAGAGGCTTCCCAGTGGGCACTGAAGATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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3UTR CCA 72 bp | GTGTCCATGGCATGCCCGGAGGCTCCTGGATCAGCGTaGCTGAGGGGACAGTTTCACTGTGCTCAGAACAGG | + |
Preference number: 3 (lower is better) Translates to: VSMACPEAPGSA*LRGQFHCAQNR Trigger: CCTGTTCTGAGCACAGTGAAACTGTCCCCTCAGCCACGCTGATCCAGGAGCCTCCGGGCATGCCATGGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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3UTR-3UTR CAA 90 bp | GAAGCCCTTCACAGTGAGCAGGGTTTCTGCAAGCAGCAGCAGTTCCCTGGGCTGGCACGGTGGCTGGCTTaGAACTGCTGCTGCAGAAGC | + |
Preference number: 3 (lower is better) Translates to: EALHSEQGFCKQQQFPGLARWLA*NCCCRS Trigger: GCTTCTGCAGCAGCAGTTCAAAGCCAGCCACCGTGC...CAGCCCAGGGAACTGCTGCTGCTTGCAGAAACCCTGCTCACTGTGAAGGGCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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3UTR TCA 72 bp | AGCAGGGTTTCTGCAAGCAGCAGCAGTTCCCTGGGCTaGTCTGGAAAGGATCCGAGAGATACTGCCCGCCCG | + |
Preference number: 3 (lower is better) Translates to: SRVSASSSSSLG*SGKDPRDTARP Trigger: CGGGCGGGCAGTATCTCTCGGATCCTTTCCAGATCAGCCCAGGGAACTGCTGCTGCTTGCAGAAACCCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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3UTR GCA 72 bp | CACAAGGCAATGGCACGGTGGCTGGCTTTGAACTGCTaGTGCAGAAGCAACTGGCCAGCACAGCCCTTGCAG | + |
Preference number: 3 (lower is better) Translates to: HKAMARWLALNC*CRSNWPAQPLQ Trigger: CTGCAAGGGCTGTGCTGGCCAGTTGCTTCTGCAGCAGCAGTTCAAAGCCAGCCACCGTGCCATTGCCTTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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3UTR GCA 72 bp | ACCCACAAGGCAATGGCACGGTGGCTGGCTTTGAACTaGTGCTGCAGAAGCAACTGGCCAGCACAGCCCTTG | + |
Preference number: 3 (lower is better) Translates to: THKAMARWLALN*CCRSNWPAQPL Trigger: CAAGGGCTGTGCTGGCCAGTTGCTTCTGCAGCAGCAGTTCAAAGCCAGCCACCGTGCCATTGCCTTGTGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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3UTR GCA 72 bp | GCCCAGGTTTGCCACCAGCCTAATGGACAGCCTGGCTaGCTCCCCACCAGACCACAGCTTTTGATTCCAAGG | + |
Preference number: 3 (lower is better) Translates to: AQVCHQPNGQPG*LPTRPQLLIPR Trigger: CCTTGGAATCAAAAGCTGTGGTCTGGTGGGGAGGCAGCCAGGCTGTCCATTAGGCTGGTGGCAAACCTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR GCA 72 bp | TCTATCTGCTGCCTGACTTCCTGGTTTGCCCAGGTTTaGCACCAGCCTAATGGACAGCCTGGCTGCCTCCCC | + |
Preference number: 3 (lower is better) Translates to: SICCLTSWFAQV*HQPNGQPGCLP Trigger: GGGGAGGCAGCCAGGCTGTCCATTAGGCTGGTGGCAAACCTGGGCAAACCAGGAAGTCAGGCAGCAGATAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR GCA 72 bp | AAGGCAATGGCACGGTGGCTGGCTTTGAACTGCTGCTaGAGAAGCAACTGGCCAGCACAGCCCTTGCAGTTT | + |
Preference number: 3 (lower is better) Translates to: KAMARWLALNCC*RSNWPAQPLQF Trigger: AAACTGCAAGGGCTGTGCTGGCCAGTTGCTTCTGCAGCAGCAGTTCAAAGCCAGCCACCGTGCCATTGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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3UTR GCA 72 bp | TGGTGTGCCCCAGATGAGCAGCAAATGCAGAGTAGCTaGTCCCTCCATCCTGCCTGGGTTTTACCAAGGGTG | + |
Preference number: 3 (lower is better) Translates to: WCAPDEQQMQSS*SLHPAWVLPRV Trigger: CACCCTTGGTAAAACCCAGGCAGGATGGAGGGAGCAGCTACTCTGCATTTGCTGCTCATCTGGGGCACACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR GCA 72 bp | TCCAAGGAGAGTGGTGTGCCCCAGATGAGCAGCAAATaGAGAGTAGCTGCTCCCTCCATCCTGCCTGGGTTT | + |
Preference number: 3 (lower is better) Translates to: SKESGVPQMSSK*RVAAPSILPGF Trigger: AAACCCAGGCAGGATGGAGGGAGCAGCTACTCTGCATTTGCTGCTCATCTGGGGCACACCACTCTCCTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR TCA 72 bp | GATCTGGAAAGGATCCGAGAGATACTGCCCGCCCGCTaGTGTCTTGGGCTTTTGTTTCTTCCCAGGCGGACA | + |
Preference number: 3 (lower is better) Translates to: DLERIREILPAR*CLGLLFLPRRT Trigger: TGTCCGCCTGGGAAGAAACAAAAGCCCAAGACATCAGCGGGCGGGCAGTATCTCTCGGATCCTTTCCAGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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3UTR GCA 72 bp | TCCTGGATCAGCGTGGCTGAGGGGACAGTTTCACTGTaGTCAGAACAGGGAAGAGGGTTCATGAAGCCCTTC | + |
Preference number: 3 (lower is better) Translates to: SWISVAEGTVSL*SEQGRGFMKPF Trigger: GAAGGGCTTCATGAACCCTCTTCCCTGTTCTGAGCACAGTGAAACTGTCCCCTCAGCCACGCTGATCCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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3UTR GCA 72 bp | CCTCTCACTCGCAGAGTCATTGGAGCACACTGCTCTTaGTGGTCTGCCTTTGAGCCAATGAGTCACTCAGCC | + |
Preference number: 3 (lower is better) Translates to: PLTRRVIGAHCS*WSAFEPMSHSA Trigger: GGCTGAGTGACTCATTGGCTCAAAGGCAGACCAGCAAGAGCAGTGTGCTCCAATGACTCTGCGAGTGAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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3UTR CCA 72 bp | AAGGATCCGAGAGATACTGCCCGCCCGCTGATGTCTTaGGCTTTTGTTTCTTCCCAGGCGGACAAGAAGGAC | + |
Preference number: 3 (lower is better) Translates to: KDPRDTARPLMS*AFVSSQADKKD Trigger: GTCCTTCTTGTCCGCCTGGGAAGAAACAAAAGCCCAAGACATCAGCGGGCGGGCAGTATCTCTCGGATCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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3UTR CCA 72 bp | CTCACTCGCAGAGTCATTGGAGCACACTGCTCTTGCTaGTCTGCCTTTGAGCCAATGAGTCACTCAGCCCGT | + |
Preference number: 3 (lower is better) Translates to: LTRRVIGAHCSC*SAFEPMSHSAR Trigger: ACGGGCTGAGTGACTCATTGGCTCAAAGGCAGACCAGCAAGAGCAGTGTGCTCCAATGACTCTGCGAGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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3UTR CCA 72 bp | CCAGGACCACCTGCTAGTGGATGGCACCACCCACAGTaGGATGGACTCTTCCACATCAGCCATGAATCAAGA | + |
Preference number: 3 (lower is better) Translates to: PGPPASGWHHPQ*DGLFHISHESR Trigger: TCTTGATTCATGGCTGATGTGGAAGAGTCCATCCCACTGTGGGTGGTGCCATCCACTAGCAGGTGGTCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CCA 72 bp | TGGCTCACCCTTGTCCTGGTGACTGACCACCATCAGTaGCTCACCTTAGTCCTGGCCTTGCTTTCAAGTCTC | + |
Preference number: 3 (lower is better) Translates to: WLTLVLVTDHHQ*LTLVLALLSSL Trigger: GAGACTTGAAAGCAAGGCCAGGACTAAGGTGAGCCACTGATGGTGGTCAGTCACCAGGACAAGGGTGAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR-3UTR CAA 90 bp | CTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCTTCCCTGCCCTGGTGCGAGACACGCCTTTCATaGTGCCTTAGGACATTTGCA | + |
Preference number: 3 (lower is better) Translates to: LCRHSGASSSAHSSLPWCETRLS*CLRTFA Trigger: TGCAAATGTCCTAAGGCACAATGAAAGGCGTGTCTC...GCACCAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR TCA 72 bp | GAGCACACTGCTCTTGCTGGTCTGCCTTTGAGCCAATaGGTCACTCAGCCCGTTTATCCCAGAGAAAGGCGT | + |
Preference number: 3 (lower is better) Translates to: EHTALAGLPLSQ*VTQPVYPRERR Trigger: ACGCCTTTCTCTGGGATAAACGGGCTGAGTGACTCATTGGCTCAAAGGCAGACCAGCAAGAGCAGTGTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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3UTR GCA 72 bp | GGGGCTTCATCTTCTGCACACTCTTCCCTGCCCTGGTaGCAACATCCTATCCTTAGAAGTAGCCTGTGGACT | + |
Preference number: 3 (lower is better) Translates to: GASSSAHSSLPW*QHPILRSSLWT Trigger: AGTCCACAGGCTACTTCTAAGGATAGGATGTTGGCACCAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR GCA 72 bp | GGCATTCTGGGGCTTCATCTTCTGCACACTCTTCCCTaGCCTGGTGCCAACATCCTATCCTTAGAAGTAGCC | + |
Preference number: 3 (lower is better) Translates to: GILGLHLLHTLP*PGANILSLEVA Trigger: GGCTACTTCTAAGGATAGGATGTTGGCACCAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCCAGAATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CCA 72 bp | GCTTTCTTACATAACCCAGGACCACCTGCTAGTGGATaGCACCACCCACAGTGGGATGGACTCTTCCACATC | + |
Preference number: 3 (lower is better) Translates to: AFLHNPGPPASG*HHPQWDGLFHI Trigger: GATGTGGAAGAGTCCATCCCACTGTGGGTGGTGCCATCCACTAGCAGGTGGTCCTGGGTTATGTAAGAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CCA 72 bp | TCACAAAGGCCCAATGAGCCTGGCAGCTATAGAGCCTaGGGCTTCTTATGCCACCTTCAGCAAGTCCACACT | + |
Preference number: 3 (lower is better) Translates to: SQRPNEPGSYRA*GFLCHLQQVHT Trigger: AGTGTGGACTTGCTGAAGGTGGCATAAGAAGCCCCAGGCTCTATAGCTGCCAGGCTCATTGGGCCTTTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CCA 72 bp | TCTGGGGCTTCATCTTCTGCACACTCTTCCCTGCCCTaGTGCCAACATCCTATCCTTAGAAGTAGCCTGTGG | + |
Preference number: 3 (lower is better) Translates to: SGASSSAHSSLP*CQHPILRSSLW Trigger: CCACAGGCTACTTCTAAGGATAGGATGTTGGCACCAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CCA 72 bp | CAGACAAGGGCATGGTTGAAATCTATGCCGGCATTCTaGGGCTTCATCTTCTGCACACTCTTCCCTGCCCTG | + |
Preference number: 3 (lower is better) Translates to: QTRAWLKSMPAF*GFIFCTLFPAL Trigger: CAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAGATTTCAACCATGCCCTTGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
||
3UTR TCA 72 bp | AGTCATTGGAGCACACTGCTCTTGCTGGTCTGCCTTTaGGCCAATGAGTCACTCAGCCCGTTTATCCCAGAG | + |
Preference number: 3 (lower is better) Translates to: SHWSTLLLLVCL*ANESLSPFIPE Trigger: CTCTGGGATAAACGGGCTGAGTGACTCATTGGCTCAAAGGCAGACCAGCAAGAGCAGTGTGCTCCAATGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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3UTR TCA 72 bp | GCTGCTCCCTCCATCCTGCCTGGGTTTTACCAAGGGTaGGGAGTTTCCGCAAATGCTTGTCCAACTCTTTCA | + |
Preference number: 3 (lower is better) Translates to: AAPSILPGFYQG*GVSANACPTLS Trigger: TGAAAGAGTTGGACAAGCATTTGCGGAAACTCCTCACCCTTGGTAAAACCCAGGCAGGATGGAGGGAGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR TCA 72 bp | CCACCCACAGTGGGATGGACTCTTCCACATCAGCCATaGATCAAGAAAATGCTCCCACAGACCAGCCTACAG | + |
Preference number: 3 (lower is better) Translates to: PPTVGWTLPHQP*IKKMLPQTSLQ Trigger: CTGTAGGCTGGTCTGTGGGAGCATTTTCTTGATTCATGGCTGATGTGGAAGAGTCCATCCCACTGTGGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CCA 72 bp | TCATTGAGATTATCAGAGGTGACTGACCACCGTCAGTaGCTCACCCTTGTCCTGGTGACTGACCACCATCAG | + |
Preference number: 3 (lower is better) Translates to: SLRLSEVTDHRQ*LTLVLVTDHHQ Trigger: CTGATGGTGGTCAGTCACCAGGACAAGGGTGAGCCACTGACGGTGGTCAGTCACCTCTGATAATCTCAATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
||
3UTR-3UTR CAA 90 bp | ACCCACAGTGGGATGGACTCTTCCACATCAGCCATGAATCAAGAAAATGCTCCCGTGGGTTCCACTCACTaGAATTTAGGGCAAGGCCCC | + |
Preference number: 3 (lower is better) Translates to: THSGMDSSTSAMNQENAPVGSTH*NLGQGP Trigger: GGGGCCTTGCCCTAAATTCAAGTGAGTGGAACCCAC...GGGAGCATTTTCTTGATTCATGGCTGATGTGGAAGAGTCCATCCCACTGTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
||
3UTR-3UTR CAA 90 bp | GGCCTTTTCCTCTTCATAGAAACATCCTCTCACTCGCAGAGTCATTGGAGCACACCGCCCGCTGATGTCTaGGGCTTTTGTTTCTTCCCA | + |
Preference number: 3 (lower is better) Translates to: GLFLFIETSSHSQSHWSTPPADV*GFCFFP Trigger: TGGGAAGAAACAAAAGCCCAAGACATCAGCGGGCGG...TGTGCTCCAATGACTCTGCGAGTGAGAGGATGTTTCTATGAAGAGGAAAAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
||
3UTR-3UTR CAA 90 bp | GGCTGCCTCCCCACCAGACCACAGCTTTTGATTCCAAGGAATACCTCCTCCCAGCGACTGAAAAACAAGTaGGGGAGGAAAGGGTTAATT | + |
Preference number: 3 (lower is better) Translates to: GCLPTRPQLLIPRNTSSQRLKNK*GRKGLI Trigger: AATTAACCCTTTCCTCCCCAACTTGTTTTTCAGTCG...CTGGGAGGAGGTATTCCTTGGAATCAAAAGCTGTGGTCTGGTGGGGAGGCAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
||
3UTR-3UTR CAA 90 bp | CATTCTGGGGCTTCATCTTCTGCACACTCTTCCCTGCCCTGGTGCCAACATCCTTCACCTTGCTTCCTCTaGTCTTGTGACTTGTGTAAC | + |
Preference number: 3 (lower is better) Translates to: HSGASSSAHSSLPWCQHPSPCFL*SCDLCN Trigger: GTTACACAAGTCACAAGACAAGAGGAAGCAAGGTGA...AGGATGTTGGCACCAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCCAGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR TCA 72 bp | CCACCTCATAGTCCTACCACCATGCCTTCCCGACCTTaGTGGACTATGTTCTCAAGCTATGAGCCACATAGC | + |
Preference number: 3 (lower is better) Translates to: PPHSPTTMPSRP*WTMFSSYEPHS Trigger: GCTATGTGGCTCATAGCTTGAGAACATAGTCCATCAAGGTCGGGAAGGCATGGTGGTAGGACTATGAGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
||
3UTR TCA 72 bp | AACTGTCCAGCTCTTGCAGTAAAGCCCACTAAGCTTTaGGCACTCGGTGGCTTTTCCAGCCTGAGGTTCCAA | + |
Preference number: 3 (lower is better) Translates to: NCPALAVKPTKL*ALGGFSSLRFQ Trigger: TTGGAACCTCAGGCTGGAAAAGCCACCGAGTGCTCAAAGCTTAGTGGGCTTTACTGCAAGAGCTGGACAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR GCA 72 bp | AAACATCCTCTCACTCGCAGAGTCATTGGAGCACACTaGTCTTGCTGGTCTGCCTTTGAGCCAATGAGTCAC | + |
Preference number: 3 (lower is better) Translates to: KHPLTRRVIGAH*SCWSAFEPMSH Trigger: GTGACTCATTGGCTCAAAGGCAGACCAGCAAGAGCAGTGTGCTCCAATGACTCTGCGAGTGAGAGGATGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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3UTR GCA 72 bp | TTGAAATCTATGCCGGCATTCTGGGGCTTCATCTTCTaGACACTCTTCCCTGCCCTGGTGCCAACATCCTAT | + |
Preference number: 3 (lower is better) Translates to: LKSMPAFWGFIF*TLFPALVPTSY Trigger: ATAGGATGTTGGCACCAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAGATTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR-3UTR CAA 90 bp | AGGGCATGGTTGAAATCTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCGCTTGGCAGCTCTGTTaGAGAAGTCTCAAAGCAGTA | + |
Preference number: 3 (lower is better) Translates to: RAWLKSMPAFWGFIFCTLAWQLC*RSLKAV Trigger: TACTGCTTTGAGACTTCTCAAACAGAGCTGCCAAGC...GAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAGATTTCAACCATGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR-3UTR CAA 90 bp | CTGCAGCATACTTCACCATGGACACATACCCAACCCAGACAGCATACCCCACCACCCTTAAATTGCTACTaGTTCAGCATTTGGACACAG | + |
Preference number: 3 (lower is better) Translates to: LQHTSPWTHTQPRQHTPPPLNCY*FSIWTQ Trigger: CTGTGTCCAAATGCTGAACAAGTAGCAATTTAAGGG...TGGTGGGGTATGCTGTCTGGGTTGGGTATGTGTCCATGGTGAAGTATGCTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
||
3UTR-3UTR CAA 90 bp | ATAGAGCCTGGGGCTTCTTATGCCACCTTCAGCAAGTCCACACTCAGACAGGGCAGTTGCTCCCTTAAATaGCTACTTGTTCAGCATTTG | + |
Preference number: 3 (lower is better) Translates to: IEPGASYATFSKSTLRQGSCSLK*LLVQHL Trigger: CAAATGCTGAACAAGTAGCAATTTAAGGGAGCAACT...GCCCTGTCTGAGTGTGGACTTGCTGAAGGTGGCATAAGAAGCCCCAGGCTCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
||
3UTR CCA 72 bp | GAGTGTGAACTCCAGGAGGAGCAGAGGCAAGAACTATaGAGGAATGCTTTTTACTGGCTTGTTCATCATGGC | + |
Preference number: 3 (lower is better) Translates to: ECELQEEQRQEL*RNAFYWLVHHG Trigger: GCCATGATGAACAAGCCAGTAAAAAGCATTCCTCCATAGTTCTTGCCTCTGCTCCTCCTGGAGTTCACACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
||
3UTR CCA 72 bp | TGGACACATATCTCAACCAGGCAGTATACCCAACCATaGACACATATCTCAACCAGGCAGTATACCCAGCCA | + |
Preference number: 3 (lower is better) Translates to: WTHISTRQYTQP*THISTRQYTQP Trigger: TGGCTGGGTATACTGCCTGGTTGAGATATGTGTCCATGGTTGGGTATACTGCCTGGTTGAGATATGTGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CCA 72 bp | TGGTCACATACCCAACCCAGACAACATACCCAACCATaGACACATATCTCAACCAGGCAGTATACCCAACCA | + |
Preference number: 3 (lower is better) Translates to: WSHTQPRQHTQP*THISTRQYTQP Trigger: TGGTTGGGTATACTGCCTGGTTGAGATATGTGTCCATGGTTGGGTATGTTGTCTGGGTTGGGTATGTGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CCA 72 bp | AAGCAGTATTTCTGTCTACTGCAGCATACTTCACCATaGACACATACCCAACCCAGACAGCATACCCCACCA | + |
Preference number: 3 (lower is better) Translates to: KQYFCLLQHTSP*THTQPRQHTPP Trigger: TGGTGGGGTATGCTGTCTGGGTTGGGTATGTGTCCATGGTGAAGTATGCTGCAGTAGACAGAAATACTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR-3UTR CAA 90 bp | AGGGCATGGTTGAAATCTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCATGCTTTTTACTGGCTaGTTCATCATGGCTCACTCT | + |
Preference number: 3 (lower is better) Translates to: RAWLKSMPAFWGFIFCTLMLFTG*FIMAHS Trigger: AGAGTGAGCCATGATGAACAAGCCAGTAAAAAGCAT...GAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAGATTTCAACCATGCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR-3UTR CAA 90 bp | ACCATGGACACATATCTCAACCAGGCAGTATACCCAACCATGGACACATATCTCCGACCCAGAGAGTCTTaGCTTCCCTCTGAAAATCCA | + |
Preference number: 3 (lower is better) Translates to: TMDTYLNQAVYPTMDTYLRPRES*LPSENP Trigger: TGGATTTTCAGAGGGAAGCAAAGACTCTCTGGGTCG...GAGATATGTGTCCATGGTTGGGTATACTGCCTGGTTGAGATATGTGTCCATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR TCA 72 bp | AAAACTCAAACGACCCAGAGAGTCTTTGCTTCCCTCTaGAAATCCACAAGCCAGCCCTCCATCAACTGTGTT | + |
Preference number: 3 (lower is better) Translates to: KTQTTQRVFASL*KSTSQPSINCV Trigger: AACACAGTTGATGGAGGGCTGGCTTGTGGATTTTCAGAGGGAAGCAAAGACTCTCTGGGTCGTTTGAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR TCA 72 bp | GGAACACATTATCAGCATTGCAGACAAGGGCATGGTTaGAATCTATGCCGGCATTCTGGGGCTTCATCTTCT | + |
Preference number: 3 (lower is better) Translates to: GTHYQHCRQGHG*NLCRHSGASSS Trigger: AGAAGATGAAGCCCCAGAATGCCGGCATAGATTTCAACCATGCCCTTGTCTGCAATGCTGATAATGTGTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR GCA 72 bp | GCCTGGGTTTTACCAAGGGTGAGGAGTTTCCGCAAATaGTTGTCCAACTCTTTCAATTCTTGGTCCTCATCT | + |
Preference number: 3 (lower is better) Translates to: AWVLPRVRSFRK*LSNSFNSWSSS Trigger: AGATGAGGACCAAGAATTGAAAGAGTTGGACAAGCATTTGCGGAAACTCCTCACCCTTGGTAAAACCCAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR GCA 72 bp | GCTTGTCCCAACAGTAGCCCACTCTCTACTACCAATTaGTGTCCTGGTCTCCTTTCTTTTGCCATGATAAAC | + |
Preference number: 3 (lower is better) Translates to: ACPNSSPLSTTN*CPGLLSFAMIN Trigger: GTTTATCATGGCAAAAGAAAGGAGACCAGGACAGCAATTGGTAGTAGAGAGTGGGCTACTGTTGGGACAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CCA 72 bp | TTATCCCAGAGAAAGGCGTGGTTGGGCTTGCTCTTTTaGGTGATTTCCTTGCTTTTCCATCAAGATGGAGCA | + |
Preference number: 3 (lower is better) Translates to: LSQRKAWLGLLF*VISLLFHQDGA Trigger: TGCTCCATCTTGATGGAAAAGCAAGGAAATCACCCAAAAGAGCAAGCCCAACCACGCCTTTCTCTGGGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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3UTR-3UTR CAA 90 bp | CTCCCCACCAGACCACAGCTTTTGATTCCAAGGAATACCTCCTCCCAGAAGATTGAGGAAAGGGTTAATTaGGCTTACACTTCCATATCA | + |
Preference number: 3 (lower is better) Translates to: LPTRPQLLIPRNTSSQKIEERVN*AYTSIS Trigger: TGATATGGAAGTGTAAGCCAAATTAACCCTTTCCTC...AATCTTCTGGGAGGAGGTATTCCTTGGAATCAAAAGCTGTGGTCTGGTGGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR TCA 72 bp | ACAACTTATTTTATCATTGAGATTATCAGAGGTGACTaGCCACCGTCAGTGGCTCACCCTTGTCCTGGTGAC | + |
Preference number: 3 (lower is better) Translates to: TTYFIIEIIRGD*PPSVAHPCPGD Trigger: GTCACCAGGACAAGGGTGAGCCACTGACGGTGGTCAGTCACCTCTGATAATCTCAATGATAAAATAAGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR GCA 72 bp | AAGAGAATTAAAAGAATGAAGTGTACACATCTTCAGTaGCCACTGGGAAGCCTCTGTAGGGTGTGCGTGATG | + |
Preference number: 3 (lower is better) Translates to: KRIKRMKCTHLQ*PLGSLCRVCVM Trigger: CATCACGCACACCCTACAGAGGCTTCCCAGTGGGCACTGAAGATGTGTACACTTCATTCTTTTAATTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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3UTR GCA 72 bp | GAACTTGATACTTTAAAGCTTCCTGTGGGGTTCCAGTaGACCCTACTTCCATCTCTAGAAGGAAGCCATACA | + |
Preference number: 3 (lower is better) Translates to: ELDTLKLPVGFQ*TLLPSLEGSHT Trigger: TGTATGGCTTCCTTCTAGAGATGGAAGTAGGGTGCACTGGAACCCCACAGGAAGCTTTAAAGTATCAAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CCA 72 bp | AAAAGGAACACATTATCAGCATTGCAGACAAGGGCATaGTTGAAATCTATGCCGGCATTCTGGGGCTTCATC | + |
Preference number: 3 (lower is better) Translates to: KRNTLSALQTRA*LKSMPAFWGFI Trigger: GATGAAGCCCCAGAATGCCGGCATAGATTTCAACCATGCCCTTGTCTGCAATGCTGATAATGTGTTCCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR GCA 72 bp | CTGTTTGAGAAGTCTCAAAGCAGTATTTCTGTCTACTaGAGCATACTTCACCATGGACACATACCCAACCCA | + |
Preference number: 3 (lower is better) Translates to: LFEKSQSSISVY*SILHHGHIPNP Trigger: TGGGTTGGGTATGTGTCCATGGTGAAGTATGCTGCAGTAGACAGAAATACTGCTTTGAGACTTCTCAAACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR TCA 72 bp | AATTTGGCTTACACTTCCATATCACATTCCAATCACTaGGTAAAGACAGAGTGTGAACTCCAGGAGGAGCAG | + |
Preference number: 3 (lower is better) Translates to: NLAYTSISHSNH*VKTECELQEEQ Trigger: CTGCTCCTCCTGGAGTTCACACTCTGTCTTTACTCAGTGATTGGAATGTGATATGGAAGTGTAAGCCAAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CCA 72 bp | AGGAGGGACTGTGGGCATTATATAGACTCACTGATATaGAGCTTGATAACCCAGAAGAGACTTCACATCAAA | + |
Preference number: 3 (lower is better) Translates to: RRDCGHYIDSLI*SLITQKRLHIK Trigger: TTTGATGTGAAGTCTCTTCTGGGTTATCAAGCTCCATATCAGTGAGTCTATATAATGCCCACAGTCCCTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CCA 72 bp | AGTTTCCGCAAATGCTTGTCCAACTCTTTCAATTCTTaGTCCTCATCTCAGACTTTCTCTCTTAGAATATTT | + |
Preference number: 3 (lower is better) Translates to: SFRKCLSNSFNS*SSSQTFSLRIF Trigger: AAATATTCTAAGAGAGAAAGTCTGAGATGAGGACCAAGAATTGAAAGAGTTGGACAAGCATTTGCGGAAACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS-3UTR TCA 90 bp | GTGTCCATGGCATGCCCGGAGGCTCCTGGATCAGCGTGGCTGAGGGGACAGTTTCCAAGAAGAGGGAGATaGGAGACAGGGAGTAGCCCA | + |
Preference number: 4 (lower is better) Translates to: VSMACPEAPGSAWLRGQFPRRGR*ETGSSP Trigger: TGGGCTACTCCCTGTCTCTCATCTCCCTCTTCTTGG...AAACTGTCCCCTCAGCCACGCTGATCCAGGAGCCTCCGGGCATGCCATGGACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS-3UTR CCA 90 bp | GAAGCCCTTCACAGTGAGCAGGGTTTCTGCAAGCAGCAGCAGTTCCCTGGGCTGCCACCACCAGGTACTTaGGCCACAGCCGCCTTTCAG | + |
Preference number: 4 (lower is better) Translates to: EALHSEQGFCKQQQFPGLPPPGT*ATAAFQ Trigger: CTGAAAGGCGGCTGTGGCCCAAGTACCTGGTGGTGG...CAGCCCAGGGAACTGCTGCTGCTTGCAGAAACCCTGCTCACTGTGAAGGGCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS-3UTR TCA 90 bp | GTGTCCATGGCATGCCCGGAGGCTCCTGGATCAGCGTGGCTGAGGGGACAGTTTGCGCTCTTGGCCTTGTaGCATGATGAGATCTGCTTT | + |
Preference number: 4 (lower is better) Translates to: VSMACPEAPGSAWLRGQFALLAL*HDEICF Trigger: AAAGCAGATCTCATCATGTCACAAGGCCAAGAGCGC...AAACTGTCCCCTCAGCCACGCTGATCCAGGAGCCTCCGGGCATGCCATGGACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS-3UTR TCA 90 bp | GGCTGCCTCCCCACCAGACCACAGCTTTTGATTCCAAGGAATACCTCCTCCCAGCGGTCAGGTGTGAGCTaGCACCTGAAGATTGCAGCT | + |
Preference number: 4 (lower is better) Translates to: GCLPTRPQLLIPRNTSSQRSGVS*HLKIAA Trigger: AGCTGCAATCTTCAGGTGTCAGCTCACACCTGACCG...CTGGGAGGAGGTATTCCTTGGAATCAAAAGCTGTGGTCTGGTGGGGAGGCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS-3UTR GCA 90 bp | CTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCTTCCCTGCCCTGGTGCGGTCTTTCTCAGCTCTaGCTTCACCTCTCTACTGGC | + |
Preference number: 4 (lower is better) Translates to: LCRHSGASSSAHSSLPWCGLSQL*LHLSTG Trigger: GCCAGTAGAGAGGTGAAGGCAGAGCTGAGAAAGACC...GCACCAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS-3UTR GCA 90 bp | CTCCCTCCATCCTGCCTGGGTTTTACCAAGGGTGAGGAGTTTCCGCAAATGCTTCTAGGACACAGGCTCTaGAGCCCCAGTGGCGAGCTA | + |
Preference number: 4 (lower is better) Translates to: LPPSCLGFTKGEEFPQMLLGHRL*SPSGEL Trigger: TAGCTCGCCACTGGGGCTGCAGAGCCTGTGTCCTAG...AAGCATTTGCGGAAACTCCTCACCCTTGGTAAAACCCAGGCAGGATGGAGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS-3UTR CCA 90 bp | CATTCTGGGGCTTCATCTTCTGCACACTCTTCCCTGCCCTGGTGCCAACATCCTGCTCTGCAGCCCCAGTaGCGAGCTAATAAGAAGCGG | + |
Preference number: 4 (lower is better) Translates to: HSGASSSAHSSLPWCQHPALQPQ*RANKKR Trigger: CCGCTTCTTATTAGCTCGCCACTGGGGCTGCAGAGC...AGGATGTTGGCACCAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCCAGAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS-3UTR TCA 90 bp | GTGTCCATGGCATGCCCGGAGGCTCCTGGATCAGCGTGGCTGAGGGGACAGTTTGTGAAGAGGAACTCATaGACCCCCATCAAAAGAATG | + |
Preference number: 4 (lower is better) Translates to: VSMACPEAPGSAWLRGQFVKRNS*TPIKRM Trigger: CATTCTTTTGATGGGGGTTCATGAGTTCCTCTTCAC...AAACTGTCCCCTCAGCCACGCTGATCCAGGAGCCTCCGGGCATGCCATGGACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS-3UTR GCA 90 bp | CTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCTTCCCTGCCCTGGTGCCTGACACCTGAAGATTaGAGCTTCTGGAGTGTCTCG | + |
Preference number: 4 (lower is better) Translates to: LCRHSGASSSAHSSLPWCLTPED*SFWSVS Trigger: CGAGACACTCCAGAAGCTGCAATCTTCAGGTGTCAG...GCACCAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS-3UTR TCA 90 bp | AAGAGGAGGACCCTGGGCTCAGCAACCTCTTTCCTAGGGATCCTCAGTTGCCAACCAGAGCTCTCAGGATaGACGAAGCGAACAGGTTCA | + |
Preference number: 4 (lower is better) Translates to: KRRTLGSATSFLGILSCQPELSG*TKRTGS Trigger: TGAACCTGTTCGCTTCGTTCATCCTGAGAGCTCTGG...TTGGCAACTGAGGATCCCTAGGAAAGAGGTTGCTGAGCCCAGGGTCCTCCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS-3UTR GCA 90 bp | AAGAGGAGGACCCTGGGCTCAGCAACCTCTTTCCTAGGGATCCTCAGTTGCCAACTGGCAAAGCCGTACTaGAAGGCCACCAGAAATCCA | + |
Preference number: 4 (lower is better) Translates to: KRRTLGSATSFLGILSCQLAKPY*KATRNP Trigger: TGGATTTCTGGTGGCCTTGCAGTACGGCTTTGCCAG...TTGGCAACTGAGGATCCCTAGGAAAGAGGTTGCTGAGCCCAGGGTCCTCCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS-3UTR GCA 90 bp | AGAGTCATTGGAGCACACTGCTCTTGCTGGTCTGCCTTTGAGCCAATGAGTCACAGCAGAGGCTCAGGATaGAGATGGTGTGTGCGCCTC | + |
Preference number: 4 (lower is better) Translates to: RVIGAHCSCWSAFEPMSHSRGSG*RWCVRL Trigger: GAGGCGCACACACCATCTGCATCCTGAGCCTCTGCT...GTGACTCATTGGCTCAAAGGCAGACCAGCAAGAGCAGTGTGCTCCAATGACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS-3UTR CCA 90 bp | TCTTGGGCTTTTGTTTCTTCCCAGGCGGACAAGAAGGACCCACAAGGCAATGGCGCTGAGGGAAGTGGGTaGGATGTGGAGATGGTACAG | + |
Preference number: 4 (lower is better) Translates to: SWAFVSSQADKKDPQGNGAEGSG*DVEMVQ Trigger: CTGTACCATCTCCACATCCCACCCACTTCCCTCAGC...GCCATTGCCTTGTGGGTCCTTCTTGTCCGCCTGGGAAGAAACAAAAGCCCAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS-3UTR CCA 90 bp | AAGAGGAGGACCCTGGGCTCAGCAACCTCTTTCCTAGGGATCCTCAGTTGCCAACCTCCGACAGCTTCTTaGAACATTTCCCCAGGAACC | + |
Preference number: 4 (lower is better) Translates to: KRRTLGSATSFLGILSCQPPTAS*NISPGT Trigger: GGTTCCTGGGGAAATGTTCCAAGAAGCTGTCGGAGG...TTGGCAACTGAGGATCCCTAGGAAAGAGGTTGCTGAGCCCAGGGTCCTCCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CAA 72 bp | AAAGGATCCGAGAGATACTGCCCGCCCGCTGATGTCTaGGGCTTTTGTTTCTTCCCAGGCGGACAAGAAGGA | + |
Preference number: 4 (lower is better) Translates to: KGSERYCPPADV*GFCFFPGGQEG Trigger: TCCTTCTTGTCCGCCTGGGAAGAAACAAAAGCCCAAGACATCAGCGGGCGGGCAGTATCTCTCGGATCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS-3UTR TCA 90 bp | AGTAGCTGCTCCCTCCATCCTGCCTGGGTTTTACCAAGGGTGAGGAGTTTCCGCGATCCACGTTTTGTTTaGAGCTGTGGTTCTCTGAGC | + |
Preference number: 4 (lower is better) Translates to: SSCSLHPAWVLPRVRSFRDPRFV*SCGSLS Trigger: GCTCAGAGAACCACAGCTTCAAACAAAACGTGGATC...GCGGAAACTCCTCACCCTTGGTAAAACCCAGGCAGGATGGAGGGAGCAGCTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS-3UTR CCA 90 bp | CGCAGAGTCATTGGAGCACACTGCTCTTGCTGGTCTGCCTTTGAGCCAATGAGTGAAGTGGGTGGGATGTaGAGATGGTACAGGCTGGTT | + |
Preference number: 4 (lower is better) Translates to: RRVIGAHCSCWSAFEPMSEVGGM*RWYRLV Trigger: AACCAGCCTGTACCATCTCCACATCCCACCCACTTC...ACTCATTGGCTCAAAGGCAGACCAGCAAGAGCAGTGTGCTCCAATGACTCTGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS-3UTR GCA 90 bp | TTCACTGTGCTCAGAACAGGGAAGAGGGTTCATGAAGCCCTTCACAGTGAGCAGCTGGCAAAGCCGTACTaGAAGGCCACCAGAAATCCA | + |
Preference number: 4 (lower is better) Translates to: FTVLRTGKRVHEALHSEQLAKPY*KATRNP Trigger: TGGATTTCTGGTGGCCTTGCAGTACGGCTTTGCCAG...CTGCTCACTGTGAAGGGCTTCATGAACCCTCTTCCCTGTTCTGAGCACAGTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS-3UTR CCA 90 bp | GCCACCTTCAGCAAGTCCACACTCAGACAGGGCTTCCCTCACCTTATTCCCTCACACTGTCAGGCCTCCTaGAGTAAGAGTTGTAGAAGA | + |
Preference number: 4 (lower is better) Translates to: ATFSKSTLRQGFPHLIPSHCQAS*SKSCRR Trigger: TCTTCTACAACTCTTACTCCAGGAGGCCTGACAGTG...TGAGGGAATAAGGTGAGGGAAGCCCTGTCTGAGTGTGGACTTGCTGAAGGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS-3UTR TCA 90 bp | CGCAGAGTCATTGGAGCACACTGCTCTTGCTGGTCTGCCTTTGAGCCAATGAGTGATCCACGTTTTGTTTaGAGCTGTGGTTCTCTGAGC | + |
Preference number: 4 (lower is better) Translates to: RRVIGAHCSCWSAFEPMSDPRFV*SCGSLS Trigger: GCTCAGAGAACCACAGCTTCAAACAAAACGTGGATC...ACTCATTGGCTCAAAGGCAGACCAGCAAGAGCAGTGTGCTCCAATGACTCTGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS-3UTR TCA 90 bp | ATAGAGCCTGGGGCTTCTTATGCCACCTTCAGCAAGTCCACACTCAGACAGGGCTTTCCAGGAAAAGAATaGGGCCAGCACACGTACTTA | + |
Preference number: 4 (lower is better) Translates to: IEPGASYATFSKSTLRQGFPGKE*GQHTYL Trigger: TAAGTACGTGTGCTGGCCTCATTCTTTTCCTGGAAA...GCCCTGTCTGAGTGTGGACTTGCTGAAGGTGGCATAAGAAGCCCCAGGCTCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS-3UTR GCA 90 bp | AGTAGCTGCTCCCTCCATCCTGCCTGGGTTTTACCAAGGGTGAGGAGTTTCCGCCTTATTCTCATTTACTaGCCAGCACCCTGTATTCTC | + |
Preference number: 4 (lower is better) Translates to: SSCSLHPAWVLPRVRSFRLILIY*PAPCIL Trigger: GAGAATACAGGGTGCTGGGCAGTAAATGAGAATAAG...GCGGAAACTCCTCACCCTTGGTAAAACCCAGGCAGGATGGAGGGAGCAGCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS-3UTR CCA 90 bp | CTGATCTGGAAAGGATCCGAGAGATACTGCCCGCCCGCTGATGTCTTGGGCTTTACATCAGCTGCAAGGTaGACAACAAGGTATGGTGAT | + |
Preference number: 4 (lower is better) Translates to: LIWKGSERYCPPADVLGFTSAAR*TTRYGD Trigger: ATCACCATACCTTGTTGTCCACCTTGCAGCTGATGT...AAAGCCCAAGACATCAGCGGGCGGGCAGTATCTCTCGGATCCTTTCCAGATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS-3UTR CCA 90 bp | CTGCAGCATACTTCACCATGGACACATACCCAACCCAGACAGCATACCCCACCAGCAACCACAAGTGATTaGTGCCCACAAAGTAGTGCA | + |
Preference number: 4 (lower is better) Translates to: LQHTSPWTHTQPRQHTPPATTSD*CPQSSA Trigger: TGCACTACTTTGTGGGCACCAATCACTTGTGGTTGC...TGGTGGGGTATGCTGTCTGGGTTGGGTATGTGTCCATGGTGAAGTATGCTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CAA 72 bp | CCTCTTCATAGAAACATCCTCTCACTCGCAGAGTCATaGGAGCACACTGCTCTTGCTGGTCTGCCTTTGAGC | + |
Preference number: 4 (lower is better) Translates to: PLHRNILSLAES*EHTALAGLPLS Trigger: GCTCAAAGGCAGACCAGCAAGAGCAGTGTGCTCCAATGACTCTGCGAGTGAGAGGATGTTTCTATGAAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS-3UTR TCA 90 bp | GATACTTTAAAGCTTCCTGTGGGGTTCCAGTGCACCCTACTTCCATCTCTAGAACCAAGAAGAGGGAGATaGGAGACAGGGAGTAGCCCA | + |
Preference number: 4 (lower is better) Translates to: DTLKLPVGFQCTLLPSLEPRRGR*ETGSSP Trigger: TGGGCTACTCCCTGTCTCTCATCTCCCTCTTCTTGG...TTCTAGAGATGGAAGTAGGGTGCACTGGAACCCCACAGGAAGCTTTAAAGTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS-3UTR TCA 90 bp | GGGCTTTTGTTTCTTCCCAGGCGGACAAGAAGGACCCACAAGGCAATGGCACGGTATATTTGTAGTCTCTaGAGCACATCTGATGAGCTC | + |
Preference number: 4 (lower is better) Translates to: GLLFLPRRTRRTHKAMARYICSL*STSDEL Trigger: GAGCTCATCAGATGTGCTTCAGAGACTACAAATATA...CCGTGCCATTGCCTTGTGGGTCCTTCTTGTCCGCCTGGGAAGAAACAAAAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS-3UTR GCA 90 bp | CTGATCTGGAAAGGATCCGAGAGATACTGCCCGCCCGCTGATGTCTTGGGCTTTCTTATTCTCATTTACTaGCCAGCACCCTGTATTCTC | + |
Preference number: 4 (lower is better) Translates to: LIWKGSERYCPPADVLGFLILIY*PAPCIL Trigger: GAGAATACAGGGTGCTGGGCAGTAAATGAGAATAAG...AAAGCCCAAGACATCAGCGGGCGGGCAGTATCTCTCGGATCCTTTCCAGATCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS-3UTR GCA 90 bp | CTGAGCCTGGCCTTGACTGGTTGTCCCTCTTCAGCCTCTGTAGGTCAGGTCAAAGATCCTGTAGTAACTTaGTTGATGGAAACCAGCAGA | + |
Preference number: 4 (lower is better) Translates to: LSLALTGCPSSASVGQVKDPVVT*LMETSR Trigger: TCTGCTGGTTTCCATCAAGCAAGTTACTACAGGATC...TTTGACCTGACCTACAGAGGCTGAAGAGGGACAACCAGTCAAGGCCAGGCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS-3UTR CCA 90 bp | TGTCTTGGGCTTTTGTTTCTTCCCAGGCGGACAAGAAGGACCCACAAGGCAATGGCAACCACAAGTGATTaGTGCCCACAAAGTAGTGCA | + |
Preference number: 4 (lower is better) Translates to: CLGLLFLPRRTRRTHKAMATTSD*CPQSSA Trigger: TGCACTACTTTGTGGGCACCAATCACTTGTGGTTGC...CATTGCCTTGTGGGTCCTTCTTGTCCGCCTGGGAAGAAACAAAAGCCCAAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS-3UTR CCA 90 bp | ACCCACAGTGGGATGGACTCTTCCACATCAGCCATGAATCAAGAAAATGCTCCCTCTGTAGGCCCTTCCTaGGCTCTCTTTATTCCACCA | + |
Preference number: 4 (lower is better) Translates to: THSGMDSSTSAMNQENAPSVGPS*ALFIPP Trigger: TGGTGGAATAAAGAGAGCCCAGGAAGGGCCTACAGA...GGGAGCATTTTCTTGATTCATGGCTGATGTGGAAGAGTCCATCCCACTGTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS-3UTR CCA 90 bp | CATTCTGGGGCTTCATCTTCTGCACACTCTTCCCTGCCCTGGTGCCAACATCCTTTTTGTTTGAAGCTGTaGTTCTCTGAGCATTCTGAC | + |
Preference number: 4 (lower is better) Translates to: HSGASSSAHSSLPWCQHPFCLKL*FSEHSD Trigger: GTCAGAATGCTCAGAGAACCACAGCTTCAAACAAAA...AGGATGTTGGCACCAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCCAGAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CAA 72 bp | ACTGACCACCATCAGTGGCTCACCTTAGTCCTGGCCTaGCTTTCAAGTCTCCTTATAAAGAAAACAGCCAGG | + |
Preference number: 4 (lower is better) Translates to: TDHHQWLTLVLA*LSSLLIKKTAR Trigger: CCTGGCTGTTTTCTTTATAAGGAGACTTGAAAGCAAGGCCAGGACTAAGGTGAGCCACTGATGGTGGTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS-3UTR TCA 90 bp | TCTTGGGCTTTTGTTTCTTCCCAGGCGGACAAGAAGGACCCACAAGGCAATGGCGAGACGAATAAGTCTTaGAAATCCTTGAACTTGGTC | + |
Preference number: 4 (lower is better) Translates to: SWAFVSSQADKKDPQGNGETNKS*KSLNLV Trigger: GACCAAGTTCAAGGATTTTCAAGACTTATTCGTCTC...GCCATTGCCTTGTGGGTCCTTCTTGTCCGCCTGGGAAGAAACAAAAGCCCAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS-3UTR TCA 90 bp | AGGGCATGGTTGAAATCTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCGAGACGAATAAGTCTTaGAAATCCTTGAACTTGGTC | + |
Preference number: 4 (lower is better) Translates to: RAWLKSMPAFWGFIFCTLETNKS*KSLNLV Trigger: GACCAAGTTCAAGGATTTTCAAGACTTATTCGTCTC...GAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAGATTTCAACCATGCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CAA 72 bp | CCTAGGAGACACGCCTTTCATTGTGCCTTAGGACATTaGCAGAGAGGCTTACCTAAGCAACAGCATCTATCT | + |
Preference number: 4 (lower is better) Translates to: PRRHAFHCALGH*QRGLPKQQHLS Trigger: AGATAGATGCTGTTGCTTAGGTAAGCCTCTCTGCAAATGTCCTAAGGCACAATGAAAGGCGTGTCTCCTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CAA 72 bp | AGGAACACATTATCAGCATTGCAGACAAGGGCATGGTaGAAATCTATGCCGGCATTCTGGGGCTTCATCTTC | + |
Preference number: 4 (lower is better) Translates to: RNTLSALQTRAW*KSMPAFWGFIF Trigger: GAAGATGAAGCCCCAGAATGCCGGCATAGATTTCAACCATGCCCTTGTCTGCAATGCTGATAATGTGTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS-3UTR TCA 90 bp | TCACTCCTTGCCAACTGCACAATGTTTCCACAAACAGTTCCTCCCTCAGTCACCAATGAGGAGCAGGGTTaGTTTTGCCAGTCTATATTT | + |
Preference number: 4 (lower is better) Translates to: SLLANCTMFPQTVPPSVTNEEQG*FCQSIF Trigger: AAATATAGACTGGCAAAATCAACCCTGCTCCTCATT...GGTGACTGAGGGAGGAACTGTTTGTGGAAACATTGTGCAGTTGGCAAGGAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS-3UTR TCA 90 bp | ACCATGGACACATATCTCAACCAGGCAGTATACCCAACCATGGACACATATCTCGTGAAGAGGAACTCATaGACCCCCATCAAAAGAATG | + |
Preference number: 4 (lower is better) Translates to: TMDTYLNQAVYPTMDTYLVKRNS*TPIKRM Trigger: CATTCTTTTGATGGGGGTTCATGAGTTCCTCTTCAC...GAGATATGTGTCCATGGTTGGGTATACTGCCTGGTTGAGATATGTGTCCATGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS-3UTR GCA 90 bp | ACCATGGACACATATCTCAACCAGGCAGTATACCCAACCATGGACACATATCTCCATTCTGACTCATCCTaGCAAGTATCTGTGGAGTTC | + |
Preference number: 4 (lower is better) Translates to: TMDTYLNQAVYPTMDTYLHSDSS*QVSVEF Trigger: GAACTCCACAGATACTTGGCAGGATGAGTCAGAATG...GAGATATGTGTCCATGGTTGGGTATACTGCCTGGTTGAGATATGTGTCCATGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CAA 72 bp | TGGGTTTTACCAAGGGTGAGGAGTTTCCGCAAATGCTaGTCCAACTCTTTCAATTCTTGGTCCTCATCTCAG | + |
Preference number: 4 (lower is better) Translates to: WVLPRVRSFRKC*SNSFNSWSSSQ Trigger: CTGAGATGAGGACCAAGAATTGAAAGAGTTGGACAAGCATTTGCGGAAACTCCTCACCCTTGGTAAAACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS-3UTR TCA 90 bp | GGCCTTTTCCTCTTCATAGAAACATCCTCTCACTCGCAGAGTCATTGGAGCACAAATGAGGAGCAGGGTTaGTTTTGCCAGTCTATATTT | + |
Preference number: 4 (lower is better) Translates to: GLFLFIETSSHSQSHWSTNEEQG*FCQSIF Trigger: AAATATAGACTGGCAAAATCAACCCTGCTCCTCATT...TGTGCTCCAATGACTCTGCGAGTGAGAGGATGTTTCTATGAAGAGGAAAAGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS-3UTR CCA 90 bp | TCACGACTGAAAAACAAGTTGGGGAGGAAAGGGTTAATTTGGCTTACACTTCCAACATCAGCTGCAAGGTaGACAACAAGGTATGGTGAT | + |
Preference number: 4 (lower is better) Translates to: SRLKNKLGRKGLIWLTLPTSAAR*TTRYGD Trigger: ATCACCATACCTTGTTGTCCACCTTGCAGCTGATGT...TGGAAGTGTAAGCCAAATTAACCCTTTCCTCCCCAACTTGTTTTTCAGTCGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CAA 72 bp | AGAGGCAAGAACTATGGAGGAATGCTTTTTACTGGCTaGTTCATCATGGCTCACTCTATCTGCTTTCTTACA | + |
Preference number: 4 (lower is better) Translates to: RGKNYGGMLFTG*FIMAHSICFLT Trigger: TGTAAGAAAGCAGATAGAGTGAGCCATGATGAACAAGCCAGTAAAAAGCATTCCTCCATAGTTCTTGCCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CAA 72 bp | CATATAATGGAATGTCTTAAGTTTCCTTTGCTGAGCTaGGCAGCTCTGTTTGAGAAGTCTCAAAGCAGTATT | + |
Preference number: 4 (lower is better) Translates to: HIMECLKFPLLS*AALFEKSQSSI Trigger: AATACTGCTTTGAGACTTCTCAAACAGAGCTGCCAAGCTCAGCAAAGGAAACTTAAGACATTCCATTATATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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3UTR CAA 72 bp | CTAAGTTCACATATAATGGAATGTCTTAAGTTTCCTTaGCTGAGCTTGGCAGCTCTGTTTGAGAAGTCTCAA | + |
Preference number: 4 (lower is better) Translates to: LSSHIMECLKFP*LSLAALFEKSQ Trigger: TTGAGACTTCTCAAACAGAGCTGCCAAGCTCAGCAAAGGAAACTTAAGACATTCCATTATATGTGAACTTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS GCA 90 bp | GGGATGTGGAGATGGTACAGGCTGGTTCACAGCAGAGGCTCAGGATaGAGATGGTGTGTGCGCCTCCCTCTCCTGGCATGCGCTCTTGGC | + |
Preference number: 5 (lower is better) Translates to: GMWRWYRLVHSRGSG*RWCVRLPLLACALG Trigger: GCCAAGAGCGCATGCCAGGAGAGGGAGGCGCACACACCATCTGCATCCTGAGCCTCTGCTGTGAACCAGCCTGTACCATCTCCACATCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS TCA 90 bp | GCTGTGCCCCATGATCCCGCAGGTTCCCAGCGGTCAGGTGTGAGCTaGCACCTGAAGATTGCAGCTTCTGGAGTGTCTCGGCACCATCTC | + |
Preference number: 5 (lower is better) Translates to: AVPHDPAGSQRSGVS*HLKIAASGVSRHHL Trigger: GAGATGGTGCCGAGACACTCCAGAAGCTGCAATCTTCAGGTGTCAGCTCACACCTGACCGCTGGGAACCTGCGGGATCATGGGGCACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS GCA 90 bp | TCCCGCAGGTTCCCAGCGGTCAGGTGTGAGCTGACACCTGAAGATTaGAGCTTCTGGAGTGTCTCGGCACCATCTCCCTCCGACAGCTTC | + |
Preference number: 5 (lower is better) Translates to: SRRFPAVRCELTPED*SFWSVSAPSPSDSF Trigger: GAAGCTGTCGGAGGGAGATGGTGCCGAGACACTCCAGAAGCTGCAATCTTCAGGTGTCAGCTCACACCTGACCGCTGGGAACCTGCGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS TCA 90 bp | AGATCTCACTCTCTTCCAGAATCTCCTCCATGGTATTGGCCAGGGTaGAGTCTCCCTCGCTGCTCTCAGACAGGCTGCTTGCCCGGGGCC | + |
Preference number: 5 (lower is better) Translates to: RSHSLPESPPWYWPG*SLPRCSQTGCLPGA Trigger: GGCCCCGGGCAAGCAGCCTGTCTGAGAGCAGCGAGGGAGACTTCACCCTGGCCAATACCATGGAGGAGATTCTGGAAGAGAGTGAGATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS-3UTR CAA 90 bp | CCACTGGGAAGCCTCTGTAGGGTGTGCGTGATGGCGGTCTCCCTGTCGGGAGAGTGCTTTCTGGAGATCTaGGCCACAGTAGGAAGGTGT | + |
Preference number: 5 (lower is better) Translates to: PLGSLCRVCVMAVSLSGECFLEI*ATVGRC Trigger: ACACCTTCCTACTGTGGCCAAGATCTCCAGAAAGCA...CTCTCCCGACAGGGAGACCGCCATCACGCACACCCTACAGAGGCTTCCCAGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS GCA 90 bp | GGGCTAGAGGCAAAGGTGGGCACCTCTCTACTGGCAAAGCCGTACTaGAAGGCCACCAGAAATCCATGGAAGGAGCTCAGGGTCAACTGG | + |
Preference number: 5 (lower is better) Translates to: GLEAKVGTSLLAKPY*KATRNPWKELRVNW Trigger: CCAGTTGACCCTGAGCTCCTTCCATGGATTTCTGGTGGCCTTGCAGTACGGCTTTGCCAGTAGAGAGGTGCCCACCTTTGCCTCTAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS-3UTR CAA 90 bp | AGGGCATGGTTGAAATCTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCTCTCAGACAGGCTGCTaGCCCGGGGCCAAGCTCCAC | + |
Preference number: 5 (lower is better) Translates to: RAWLKSMPAFWGFIFCTLSQTGC*PGAKLH Trigger: GTGGAGCTTGGCCCCGGGCAAGCAGCCTGTCTGAGA...GAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAGATTTCAACCATGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS CCA 90 bp | GCAGCTTCTGGAGTGTCTCGGCACCATCTCCCTCCGACAGCTTCTTaGAACATTTCCCCAGGAACCGGAAGTTCTTCCCTAGGACACAGG | + |
Preference number: 5 (lower is better) Translates to: AASGVSRHHLPPTAS*NISPGTGSSSLGHR Trigger: CCTGTGTCCTAGGGAAGAACTTCCGGTTCCTGGGGAAATGTTCCAAGAAGCTGTCGGAGGGAGATGGTGCCGAGACACTCCAGAAGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS-3UTR CAA 90 bp | AGAGTCATTGGAGCACACTGCTCTTGCTGGTCTGCCTTTGAGCCAATGAGTCACCCCACCACCAGGTACTaGGGCCACAGCCGCCTTTCA | + |
Preference number: 5 (lower is better) Translates to: RVIGAHCSCWSAFEPMSHPTTRY*GHSRLS Trigger: TGAAAGGCGGCTGTGGCCCAAGTACCTGGTGGTGGG...GTGACTCATTGGCTCAAAGGCAGACCAGCAAGAGCAGTGTGCTCCAATGACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS TCA 90 bp | GATGGTGTGTGCGCCTCCCTCTCCTGGCATGCGCTCTTGGCCTTGTaGCATGATGAGATCTGCTTTCTGGAGATCTTGGCCACAGTAGGA | + |
Preference number: 5 (lower is better) Translates to: DGVCASLSWHALLAL*HDEICFLEILATVG Trigger: TCCTACTGTGGCCAAGATCTCCAGAAAGCAGATCTCATCATGTCACAAGGCCAAGAGCGCATGCCAGGAGAGGGAGGCGCACACACCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS GCA 90 bp | GAGCATGGAGGTAAAGTCCTTCAACCAGCAACCACAAGTGATTGGTaGCCACAAAGTAGTGCAGGAGGACCTGGACAGAGCGGCAGGAGG | + |
Preference number: 5 (lower is better) Translates to: EHGGKVLQPATTSDW*PQSSAGGPGQSGRR Trigger: CCTCCTGCCGCTCTGTCCAGGTCCTCCTGCACTACTTTGTGGGCACCAATCACTTGTGGTTGCTGGTTGAAGGACTTTACCTCCATGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021289.10 ENSMUST00000051765.9 |
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CDS CCA 90 bp | AGGATGCAGATGGTGTGTGCGCCTCCCTCTCCTGGCATGCGCTCTTaGCCTTGTGACATGATGAGATCTGCTTTCTGGAGATCTTGGCCA | + |
Preference number: 5 (lower is better) Translates to: RMQMVCAPPSPGMRS*PCDMMRSAFWRSWP Trigger: TGGCCAAGATCTCCAGAAAGCAGATCTCATCATGTCACAAGGCCAAGAGCGCATGCCAGGAGAGGGAGGCGCACACACCATCTGCATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS-3UTR CAA 90 bp | GCCACCTTCAGCAAGTCCACACTCAGACAGGGCTTCCCTCACCTTATTCCCTCACCCTCCGACAGCTTCTaGGAACATTTCCCCAGGAAC | + |
Preference number: 5 (lower is better) Translates to: ATFSKSTLRQGFPHLIPSPSDSF*EHFPRN Trigger: GTTCCTGGGGAAATGTTCCAAGAAGCTGTCGGAGGG...TGAGGGAATAAGGTGAGGGAAGCCCTGTCTGAGTGTGGACTTGCTGAAGGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS-3UTR CAA 90 bp | TGGAAAGGATCCGAGAGATACTGCCCGCCCGCTGATGTCTTGGGCTTTTGTTTCTTTCAGGAAGCACTGTaGGCTCCAGCAGAGCATGGA | + |
Preference number: 5 (lower is better) Translates to: WKGSERYCPPADVLGFCFFQEAL*APAEHG Trigger: TCCATGCTCTGCTGGAGCCAACAGTGCTTCCTGAAA...GAAACAAAAGCCCAAGACATCAGCGGGCGGGCAGTATCTCTCGGATCCTTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS CCA 90 bp | AGCTGTGGTTCTCTGAGCATTCTGACTCATCCTGCCAAGTATCTGTaGAGTTCTCTTGCTTCTGCCAAGTCCCCTGAGCCAAGCAGTGTC | + |
Preference number: 5 (lower is better) Translates to: SCGSLSILTHPAKYL*SSLASAKSPEPSSV Trigger: GACACTGCTTGGCTCAGGGGACTTGGCAGAAGCAAGAGAACTCCACAGATACTTGGCAGGATGAGTCAGAATGCTCAGAGAACCACAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS-3UTR CAA 90 bp | AGGGCATGGTTGAAATCTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCTTTCAGGAAGCACTGTaGGCTCCAGCAGAGCATGGA | + |
Preference number: 5 (lower is better) Translates to: RAWLKSMPAFWGFIFCTLFQEAL*APAEHG Trigger: TCCATGCTCTGCTGGAGCCAACAGTGCTTCCTGAAA...GAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAGATTTCAACCATGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS-3UTR CAA 90 bp | CTCCCTCCATCCTGCCTGGGTTTTACCAAGGGTGAGGAGTTTCCGCAAATGCTTCCTGTAGTAACTTGCTaGATGGAAACCAGCAGAAGC | + |
Preference number: 5 (lower is better) Translates to: LPPSCLGFTKGEEFPQMLPVVTC*METSRS Trigger: GCTTCTGCTGGTTTCCATCAAGCAAGTTACTACAGG...AAGCATTTGCGGAAACTCCTCACCCTTGGTAAAACCCAGGCAGGATGGAGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS-3UTR CAA 90 bp | AAGAGGAGGACCCTGGGCTCAGCAACCTCTTTCCTAGGGATCCTCAGTTGCCAAGGAGCAGGGTTGATTTaGCCAGTCTATATTTGTAGT | + |
Preference number: 5 (lower is better) Translates to: KRRTLGSATSFLGILSCQGAGLI*PVYICS Trigger: ACTACAAATATAGACTGGCAAAATCAACCCTGCTCC...TTGGCAACTGAGGATCCCTAGGAAAGAGGTTGCTGAGCCCAGGGTCCTCCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS-3UTR CAA 90 bp | ACCATGGACACATATCTCAACCAGGCAGTATACCCAACCATGGACACATATCTCATCTCCTCCATGGTATaGGCCAGGGTGAAGTCTCCC | + |
Preference number: 5 (lower is better) Translates to: TMDTYLNQAVYPTMDTYLISSMV*ARVKSP Trigger: GGGAGACTTCACCCTGGCCAATACCATGGAGGAGAT...GAGATATGTGTCCATGGTTGGGTATACTGCCTGGTTGAGATATGTGTCCATGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS-3UTR CAA 90 bp | ATCTGGAAAGGATCCGAGAGATACTGCCCGCCCGCTGATGTCTTGGGCTTTTGTGGAGCAGGGTTGATTTaGCCAGTCTATATTTGTAGT | + |
Preference number: 5 (lower is better) Translates to: IWKGSERYCPPADVLGFCGAGLI*PVYICS Trigger: ACTACAAATATAGACTGGCAAAATCAACCCTGCTCC...ACAAAAGCCCAAGACATCAGCGGGCGGGCAGTATCTCTCGGATCCTTTCCAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS-3UTR CAA 90 bp | AGGGCATGGTTGAAATCTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCAGATCCTGTAGTAACTaGCTTGATGGAAACCAGCAG | + |
Preference number: 5 (lower is better) Translates to: RAWLKSMPAFWGFIFCTLRSCSN*LDGNQQ Trigger: CTGCTGGTTTCCATCAAGCAAGTTACTACAGGATCT...GAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAGATTTCAACCATGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS CCA 90 bp | TCTCTGACAGATATGACATCCATCCACTCTCACTGTCAGGCCTCCTaGAGTAAGAGTTGTAGAAGACCATGTCCTTCACAAGGACAACCA | + |
Preference number: 5 (lower is better) Translates to: SLTDMTSIHSHCQAS*SKSCRRPCPSQGQP Trigger: TGGTTGTCCTTGTGAAGGACATGGTCTTCTACAACTCTTACTCCAGGAGGCCTGACAGTGAGAGTGGATGGATGTCATATCTGTCAGAGA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS-3UTR CAA 90 bp | TGTCTTGGGCTTTTGTTTCTTCCCAGGCGGACAAGAAGGACCCACAAGGCAATGATAGTGATCCACGTTTaGTTTGAAGCTGTGGTTCTC | + |
Preference number: 5 (lower is better) Translates to: CLGLLFLPRRTRRTHKAMIVIHV*FEAVVL Trigger: GAGAACCACAGCTTCAAACAAAACGTGGATCACTAT...CATTGCCTTGTGGGTCCTTCTTGTCCGCCTGGGAAGAAACAAAAGCCCAAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS GCA 90 bp | TTTCTTATTCTCATTTACTGCCCAGCACCCTGTATTCTCCAGGCTTaGTCGGACAAAAATCCAGGGAATAACAAACAGCATGGGGAAGGC | + |
Preference number: 5 (lower is better) Translates to: FLILIYCPAPCILQA*SDKNPGNNKQHGEG Trigger: GCCTTCCCCATGCTGTTTGTTATTCCCTGGATTTTTGTCCGAGCAAGCCTGGAGAATACAGGGTGCTGGGCAGTAAATGAGAATAAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021289.10 ENSMUST00000051765.9 |
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CDS-3UTR CAA 90 bp | CTCCCCACCAGACCACAGCTTTTGATTCCAAGGAATACCTCCTCCCAGAAGATTATAGTGATCCACGTTTaGTTTGAAGCTGTGGTTCTC | + |
Preference number: 5 (lower is better) Translates to: LPTRPQLLIPRNTSSQKIIVIHV*FEAVVL Trigger: GAGAACCACAGCTTCAAACAAAACGTGGATCACTAT...AATCTTCTGGGAGGAGGTATTCCTTGGAATCAAAAGCTGTGGTCTGGTGGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS-3UTR CAA 90 bp | CCTGGTCTCCTTTCTTTTGCCATGATAAACATCACGACTGAAAAACAAGTTGGGATCTGTGGAGTTCTCTaGCTTCTGCCAAGTCCCCTG | + |
Preference number: 5 (lower is better) Translates to: PGLLSFAMINITTEKQVGICGVL*LLPSPL Trigger: CAGGGGACTTGGCAGAAGCAAGAGAACTCCACAGAT...CCCAACTTGTTTTTCAGTCGTGATGTTTATCATGGCAAAAGAAAGGAGACCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS TCA 90 bp | GCAAGGTGGACAACAAGGTATGGTGATAGTGATCCACGTTTTGTTTaGAGCTGTGGTTCTCTGAGCATTCTGACTCATCCTGCCAAGTAT | + |
Preference number: 5 (lower is better) Translates to: ARWTTRYGDSDPRFV*SCGSLSILTHPAKY Trigger: ATACTTGGCAGGATGAGTCAGAATGCTCAGAGAACCACAGCTTCAAACAAAACGTGGATCACTATCACCATACCTTGTTGTCCACCTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS TCA 90 bp | ATGGAAGGAGCTCAGGGTCAACTGGATGAAGAGACGAATAAGTCTTaGAAATCCTTGAACTTGGTCGTCGGTGAAGAAAGTGAAGAGGAA | + |
Preference number: 5 (lower is better) Translates to: MEGAQGQLDEETNKS*KSLNLVVGEESEEE Trigger: TTCCTCTTCACTTTCTTCACCGACGACCAAGTTCAAGGATTTTCAAGACTTATTCGTCTCTTCATCCAGTTGACCCTGAGCTCCTTCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021289.10 ENSMUST00000051765.9 |
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CDS GCA 72 bp | TGGTTCACAGCAGAGGCTCAGGATGCAGATGGTGTGTaGGCCTCCCTCTCCTGGCATGCGCTCTTGGCCTTG | + |
Preference number: 6 (lower is better) Translates to: WFTAEAQDADGV*ASLSWHALLAL Trigger: CAAGGCCAAGAGCGCATGCCAGGAGAGGGAGGCGCACACACCATCTGCATCCTGAGCCTCTGCTGTGAACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS CCA 72 bp | ACAGCATGGGGAAGGCCCAACCCACCACCAGGTACTTaGGCCACAGCCGCCTTTCAGGAAGCACTGTTGGCT | + |
Preference number: 6 (lower is better) Translates to: TAWGRPNPPPGT*ATAAFQEALLA Trigger: AGCCAACAGTGCTTCCTGAAAGGCGGCTGTGGCCCAAGTACCTGGTGGTGGGTTGGGCCTTCCCCATGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021289.10 ENSMUST00000051765.9 |
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CDS GCA 72 bp | AGATGGTACAGGCTGGTTCACAGCAGAGGCTCAGGATaGAGATGGTGTGTGCGCCTCCCTCTCCTGGCATGC | + |
Preference number: 6 (lower is better) Translates to: RWYRLVHSRGSG*RWCVRLPLLAC Trigger: GCATGCCAGGAGAGGGAGGCGCACACACCATCTGCATCCTGAGCCTCTGCTGTGAACCAGCCTGTACCATCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS CCA 72 bp | TACAGGCTGGTTCACAGCAGAGGCTCAGGATGCAGATaGTGTGTGCGCCTCCCTCTCCTGGCATGCGCTCTT | + |
Preference number: 6 (lower is better) Translates to: YRLVHSRGSGCR*CVRLPLLACAL Trigger: AAGAGCGCATGCCAGGAGAGGGAGGCGCACACACCATCTGCATCCTGAGCCTCTGCTGTGAACCAGCCTGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS CAA 90 bp | GGAATAACAAACAGCATGGGGAAGGCCCAACCCACCACCAGGTACTaGGGCCACAGCCGCCTTTCAGGAAGCACTGTTGGCTCCAGCAGA | + |
Preference number: 6 (lower is better) Translates to: GITNSMGKAQPTTRY*GHSRLSGSTVGSSR Trigger: TCTGCTGGAGCCAACAGTGCTTCCTGAAAGGCGGCTGTGGCCCAAGTACCTGGTGGTGGGTTGGGCCTTCCCCATGCTGTTTGTTATTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021289.10 ENSMUST00000051765.9 |
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CDS GCA 72 bp | TTCCCAGCGGTCAGGTGTGAGCTGACACCTGAAGATTaGAGCTTCTGGAGTGTCTCGGCACCATCTCCCTCC | + |
Preference number: 6 (lower is better) Translates to: FPAVRCELTPED*SFWSVSAPSPS Trigger: GGAGGGAGATGGTGCCGAGACACTCCAGAAGCTGCAATCTTCAGGTGTCAGCTCACACCTGACCGCTGGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS TCA 72 bp | TGCGCCTCCCTCTCCTGGCATGCGCTCTTGGCCTTGTaGCATGATGAGATCTGCTTTCTGGAGATCTTGGCC | + |
Preference number: 6 (lower is better) Translates to: CASLSWHALLAL*HDEICFLEILA Trigger: GGCCAAGATCTCCAGAAAGCAGATCTCATCATGTCACAAGGCCAAGAGCGCATGCCAGGAGAGGGAGGCGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS GCA 72 bp | GCAAAGGTGGGCACCTCTCTACTGGCAAAGCCGTACTaGAAGGCCACCAGAAATCCATGGAAGGAGCTCAGG | + |
Preference number: 6 (lower is better) Translates to: AKVGTSLLAKPY*KATRNPWKELR Trigger: CCTGAGCTCCTTCCATGGATTTCTGGTGGCCTTGCAGTACGGCTTTGCCAGTAGAGAGGTGCCCACCTTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS CAA 90 bp | TGCAGCTTCTGGAGTGTCTCGGCACCATCTCCCTCCGACAGCTTCTaGGAACATTTCCCCAGGAACCGGAAGTTCTTCCCTAGGACACAG | + |
Preference number: 6 (lower is better) Translates to: CSFWSVSAPSPSDSF*EHFPRNRKFFPRTQ Trigger: CTGTGTCCTAGGGAAGAACTTCCGGTTCCTGGGGAAATGTTCCAAGAAGCTGTCGGAGGGAGATGGTGCCGAGACACTCCAGAAGCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS GCA 72 bp | AGCTCTGCCTTCACCTCTCTACTGGCAAAGCCGTACTaGAAGGCCACCAGAAATCCATGGAAGGAGCTCAGG | + |
Preference number: 6 (lower is better) Translates to: SSAFTSLLAKPY*KATRNPWKELR Trigger: CCTGAGCTCCTTCCATGGATTTCTGGTGGCCTTGCAGTACGGCTTTGCCAGTAGAGAGGTGAAGGCAGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS CCA 72 bp | ATGGTGTGTGCGCCTCCCTCTCCTGGCATGCGCTCTTaGCCTTGTGACATGATGAGATCTGCTTTCTGGAGA | + |
Preference number: 6 (lower is better) Translates to: MVCAPPSPGMRS*PCDMMRSAFWR Trigger: TCTCCAGAAAGCAGATCTCATCATGTCACAAGGCCAAGAGCGCATGCCAGGAGAGGGAGGCGCACACACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021289.10 |
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CDS CCA 72 bp | GGAGTGTCTCGGCACCATCTCCCTCCGACAGCTTCTTaGAACATTTCCCCAGGAACCGGAAGTTCTTCCCTA | + |
Preference number: 6 (lower is better) Translates to: GVSRHHLPPTAS*NISPGTGSSSL Trigger: TAGGGAAGAACTTCCGGTTCCTGGGGAAATGTTCCAAGAAGCTGTCGGAGGGAGATGGTGCCGAGACACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS CAA 72 bp | TGGAGTGTCTCGGCACCATCTCCCTCCGACAGCTTCTaGGAACATTTCCCCAGGAACCGGAAGTTCTTCCCT | + |
Preference number: 6 (lower is better) Translates to: WSVSAPSPSDSF*EHFPRNRKFFP Trigger: AGGGAAGAACTTCCGGTTCCTGGGGAAATGTTCCAAGAAGCTGTCGGAGGGAGATGGTGCCGAGACACTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS GCA 72 bp | GGTAAAGTCCTTCAACCAGCAACCACAAGTGATTGGTaGCCACAAAGTAGTGCAGGAGGACCTGGACAGAGC | + |
Preference number: 6 (lower is better) Translates to: GKVLQPATTSDW*PQSSAGGPGQS Trigger: GCTCTGTCCAGGTCCTCCTGCACTACTTTGTGGGCACCAATCACTTGTGGTTGCTGGTTGAAGGACTTTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021289.10 ENSMUST00000051765.9 |
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CDS CAA 72 bp | ACTGTCTCCTCAAGGAGAGATCCTGTAGTAACTTGCTaGATGGAAACCAGCAGAAGCAGGGCGAGGAAGGGC | + |
Preference number: 6 (lower is better) Translates to: TVSSRRDPVVTC*METSRSRARKG Trigger: GCCCTTCCTCGCCCTGCTTCTGCTGGTTTCCATCAAGCAAGTTACTACAGGATCTCTCCTTGAGGAGACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS CCA 72 bp | TCTCTGAGCATTCTGACTCATCCTGCCAAGTATCTGTaGAGTTCTCTTGCTTCTGCCAAGTCCCCTGAGCCA | + |
Preference number: 6 (lower is better) Translates to: SLSILTHPAKYL*SSLASAKSPEP Trigger: TGGCTCAGGGGACTTGGCAGAAGCAAGAGAACTCCACAGATACTTGGCAGGATGAGTCAGAATGCTCAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |
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CDS CCA 72 bp | GATATGACATCCATCCACTCTCACTGTCAGGCCTCCTaGAGTAAGAGTTGTAGAAGACCATGTCCTTCACAA | + |
Preference number: 6 (lower is better) Translates to: DMTSIHSHCQAS*SKSCRRPCPSQ Trigger: TTGTGAAGGACATGGTCTTCTACAACTCTTACTCCAGGAGGCCTGACAGTGAGAGTGGATGGATGTCATATC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051765.9 |