RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GLP2R (Mus musculus)

Ensembl gene IDs: ENSMUSG00000049928

Ensembl transcript IDs: ENSMUST00000021289.10, ENSMUST00000051765.9

Found 219 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGAGGTGTCCATGGCATGCCCGGAGGCTCCTGGATCAGCGTGGCTaGGGGGACAGTTTCACTGTGCTCAGAACAGGGAAGAGGGTTCAT +
Preference number: 1 (lower is better)
Translates to: ERCPWHARRLLDQRG*GDSFTVLRTGKRVH
Trigger: ATGAACCCTCTTCCCTGTTCTGAGCACAGTGAAACTGTCCCCTCAGCCACGCTGATCCAGGAGCCTCCGGGCATGCCATGGACACCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR CCA 90 bp AGTGAGCAGGGTTTCTGCAAGCAGCAGCAGTTCCCTGGGCTGATCTaGAAAGGATCCGAGAGATACTGCCCGCCCGCTGATGTCTTGGGC +
Preference number: 1 (lower is better)
Translates to: SEQGFCKQQQFPGLI*KGSERYCPPADVLG
Trigger: GCCCAAGACATCAGCGGGCGGGCAGTATCTCTCGGATCCTTTCCAGATCAGCCCAGGGAACTGCTGCTGCTTGCAGAAACCCTGCTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR GCA 90 bp CACACCCTGTCCAAGGAGAGTGGTGTGCCCCAGATGAGCAGCAAATaGAGAGTAGCTGCTCCCTCCATCCTGCCTGGGTTTTACCAAGGG +
Preference number: 1 (lower is better)
Translates to: HTLSKESGVPQMSSK*RVAAPSILPGFYQG
Trigger: CCCTTGGTAAAACCCAGGCAGGATGGAGGGAGCAGCTACTCTGCATTTGCTGCTCATCTGGGGCACACCACTCTCCTTGGACAGGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR TCA 90 bp TTCACAGTGAGCAGGGTTTCTGCAAGCAGCAGCAGTTCCCTGGGCTaGTCTGGAAAGGATCCGAGAGATACTGCCCGCCCGCTGATGTCT +
Preference number: 1 (lower is better)
Translates to: FTVSRVSASSSSSLG*SGKDPRDTARPLMS
Trigger: AGACATCAGCGGGCGGGCAGTATCTCTCGGATCCTTTCCAGATCAGCCCAGGGAACTGCTGCTGCTTGCAGAAACCCTGCTCACTGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR GCA 90 bp CAAAGGCCCAATGAGCCTGGCAGCTATAGAGCCTGGGGCTTCTTATaGCACCTTCAGCAAGTCCACACTCAGACAGGGCTTCCCTCACCT +
Preference number: 1 (lower is better)
Translates to: QRPNEPGSYRAWGFL*HLQQVHTQTGLPSP
Trigger: AGGTGAGGGAAGCCCTGTCTGAGTGTGGACTTGCTGAAGGTGGCATAAGAAGCCCCAGGCTCTATAGCTGCCAGGCTCATTGGGCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR GCA 90 bp ACAGGGAAGAGGGTTCATGAAGCCCTTCACAGTGAGCAGGGTTTCTaGAAGCAGCAGCAGTTCCCTGGGCTGATCTGGAAAGGATCCGAG +
Preference number: 1 (lower is better)
Translates to: TGKRVHEALHSEQGF*KQQQFPGLIWKGSE
Trigger: CTCGGATCCTTTCCAGATCAGCCCAGGGAACTGCTGCTGCTTGCAGAAACCCTGCTCACTGTGAAGGGCTTCATGAACCCTCTTCCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR GCA 90 bp CAAGGAGAGTGGTGTGCCCCAGATGAGCAGCAAATGCAGAGTAGCTaGTCCCTCCATCCTGCCTGGGTTTTACCAAGGGTGAGGAGTTTC +
Preference number: 1 (lower is better)
Translates to: QGEWCAPDEQQMQSS*SLHPAWVLPRVRSF
Trigger: GAAACTCCTCACCCTTGGTAAAACCCAGGCAGGATGGAGGGAGCAGCTACTCTGCATTTGCTGCTCATCTGGGGCACACCACTCTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CCA 90 bp CCAGATGAGCAGCAAATGCAGAGTAGCTGCTCCCTCCATCCTGCCTaGGTTTTACCAAGGGTGAGGAGTTTCCGCAAATGCTTGTCCAAC +
Preference number: 1 (lower is better)
Translates to: PDEQQMQSSCSLHPA*VLPRVRSFRKCLSN
Trigger: GTTGGACAAGCATTTGCGGAAACTCCTCACCCTTGGTAAAACCCAGGCAGGATGGAGGGAGCAGCTACTCTGCATTTGCTGCTCATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR TCA 90 bp AGCCTAATGGACAGCCTGGCTGCCTCCCCACCAGACCACAGCTTTTaGTTCCAAGGAATACCTCCTCCCAGAAGATTCTGTTGCAATGAC +
Preference number: 1 (lower is better)
Translates to: SLMDSLAASPPDHSF*FQGIPPPRRFCCND
Trigger: GTCATTGCAACAGAATCTTCTGGGAGGAGGTATTCCTTGGAATCAAAAGCTGTGGTCTGGTGGGGAGGCAGCCAGGCTGTCCATTAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR TCA 90 bp CATTTGCAGAGAGGCTTACCTAAGCAACAGCATCTATCTGCTGCCTaGCTTCCTGGTTTGCCCAGGTTTGCCACCAGCCTAATGGACAGC +
Preference number: 1 (lower is better)
Translates to: HLQRGLPKQQHLSAA*LPGLPRFATSLMDS
Trigger: GCTGTCCATTAGGCTGGTGGCAAACCTGGGCAAACCAGGAAGTCAGGCAGCAGATAGATGCTGTTGCTTAGGTAAGCCTCTCTGCAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CCA 90 bp ACTCTATCTGCTTTCTTACATAACCCAGGACCACCTGCTAGTGGATaGCACCACCCACAGTGGGATGGACTCTTCCACATCAGCCATGAA +
Preference number: 1 (lower is better)
Translates to: TLSAFLHNPGPPASG*HHPQWDGLFHISHE
Trigger: TTCATGGCTGATGTGGAAGAGTCCATCCCACTGTGGGTGGTGCCATCCACTAGCAGGTGGTCCTGGGTTATGTAAGAAAGCAGATAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CCA 90 bp GCTTCCTCTTGTCTTGTGACTTGTGTAACTGAGCCTGGCCTTGACTaGTTGTCCCTCTTCAGCCTCTGTAGGTCAGGTCAAATCCAGCTT +
Preference number: 1 (lower is better)
Translates to: ASSCLVTCVTEPGLD*LSLFSLCRSGQIQL
Trigger: AAGCTGGATTTGACCTGACCTACAGAGGCTGAAGAGGGACAACCAGTCAAGGCCAGGCTCAGTTACACAAGTCACAAGACAAGAGGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CCA 90 bp CTTATTTTATCATTGAGATTATCAGAGGTGACTGACCACCGTCAGTaGCTCACCCTTGTCCTGGTGACTGACCACCATCAGTGGCTCACC +
Preference number: 1 (lower is better)
Translates to: LILSLRLSEVTDHRQ*LTLVLVTDHHQWLT
Trigger: GGTGAGCCACTGATGGTGGTCAGTCACCAGGACAAGGGTGAGCCACTGACGGTGGTCAGTCACCTCTGATAATCTCAATGATAAAATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR TCA 90 bp AGACAGGGCTTCCCTCACCTTATTCCCTCACCTGGGCTTTACTACTaGTGTAGGATGAAGAATGGATTAGCCTCCTGGAGCAGGAAATCT +
Preference number: 1 (lower is better)
Translates to: RQGFPHLIPSPGLYY*CRMKNGLASWSRKS
Trigger: AGATTTCCTGCTCCAGGAGGCTAATCCATTCTTCATCCTACATCAGTAGTAAAGCCCAGGTGAGGGAATAAGGTGAGGGAAGCCCTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR GCA 90 bp CATGGCCAGGCTTGTCCCAACAGTAGCCCACTCTCTACTACCAATTaGTGTCCTGGTCTCCTTTCTTTTGCCATGATAAACATCACGACT +
Preference number: 1 (lower is better)
Translates to: HGQACPNSSPLSTTN*CPGLLSFAMINITT
Trigger: AGTCGTGATGTTTATCATGGCAAAAGAAAGGAGACCAGGACAGCAATTGGTAGTAGAGAGTGGGCTACTGTTGGGACAAGCCTGGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR GCA 90 bp CTCCATCCTGCCTGGGTTTTACCAAGGGTGAGGAGTTTCCGCAAATaGTTGTCCAACTCTTTCAATTCTTGGTCCTCATCTCAGACTTTC +
Preference number: 1 (lower is better)
Translates to: LHPAWVLPRVRSFRK*LSNSFNSWSSSQTF
Trigger: GAAAGTCTGAGATGAGGACCAAGAATTGAAAGAGTTGGACAAGCATTTGCGGAAACTCCTCACCCTTGGTAAAACCCAGGCAGGATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CCA 90 bp TTTGAGCCAATGAGTCACTCAGCCCGTTTATCCCAGAGAAAGGCGTaGTTGGGCTTGCTCTTTTGGGTGATTTCCTTGCTTTTCCATCAA +
Preference number: 1 (lower is better)
Translates to: FEPMSHSARLSQRKA*LGLLFWVISLLFHQ
Trigger: TTGATGGAAAAGCAAGGAAATCACCCAAAAGAGCAAGCCCAACCACGCCTTTCTCTGGGATAAACGGGCTGAGTGACTCATTGGCTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR CCA 90 bp CTTGATAACCCAGAAGAGACTTCACATCAAAATGGGGATAGTGAATaGAAAGAGGAGGACCCTGGGCTCAGCAACCTCTTTCCTAGGGAT +
Preference number: 1 (lower is better)
Translates to: LDNPEETSHQNGDSE*KEEDPGLSNLFPRD
Trigger: ATCCCTAGGAAAGAGGTTGCTGAGCCCAGGGTCCTCCTCTTTCCATTCACTATCCCCATTTTGATGTGAAGTCTCTTCTGGGTTATCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CCA 90 bp TCAGCCCGTTTATCCCAGAGAAAGGCGTGGTTGGGCTTGCTCTTTTaGGTGATTTCCTTGCTTTTCCATCAAGATGGAGCATTAAGAGAA +
Preference number: 1 (lower is better)
Translates to: SARLSQRKAWLGLLF*VISLLFHQDGALRE
Trigger: TTCTCTTAATGCTCCATCTTGATGGAAAAGCAAGGAAATCACCCAAAAGAGCAAGCCCAACCACGCCTTTCTCTGGGATAAACGGGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR TCA 90 bp CAGTTTAGATCCTTCCTCCCAGAGATGTTTAGGTTTGTGTCAAGTTaGCAAAAGCTTGCCCACATGCCCACAACACTAACATTGGCCTCA +
Preference number: 1 (lower is better)
Translates to: QFRSFLPEMFRFVSS*QKLAHMPTTLTLAS
Trigger: TGAGGCCAATGTTAGTGTTGTGGGCATGTGGGCAAGCTTTTGTCAACTTGACACAAACCTAAACATCTCTGGGAGGAAGGATCTAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR GCA 90 bp TTGGCAGCTCTGTTTGAGAAGTCTCAAAGCAGTATTTCTGTCTACTaGAGCATACTTCACCATGGACACATACCCAACCCAGACAGCATA +
Preference number: 1 (lower is better)
Translates to: LAALFEKSQSSISVY*SILHHGHIPNPDSI
Trigger: TATGCTGTCTGGGTTGGGTATGTGTCCATGGTGAAGTATGCTGCAGTAGACAGAAATACTGCTTTGAGACTTCTCAAACAGAGCTGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CCA 90 bp GTAAAGACAGAGTGTGAACTCCAGGAGGAGCAGAGGCAAGAACTATaGAGGAATGCTTTTTACTGGCTTGTTCATCATGGCTCACTCTAT +
Preference number: 1 (lower is better)
Translates to: VKTECELQEEQRQEL*RNAFYWLVHHGSLY
Trigger: ATAGAGTGAGCCATGATGAACAAGCCAGTAAAAAGCATTCCTCCATAGTTCTTGCCTCTGCTCCTCCTGGAGTTCACACTCTGTCTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CCA 90 bp AGGGTGAGGAGTTTCCGCAAATGCTTGTCCAACTCTTTCAATTCTTaGTCCTCATCTCAGACTTTCTCTCTTAGAATATTTGCTGTGATT +
Preference number: 1 (lower is better)
Translates to: RVRSFRKCLSNSFNS*SSSQTFSLRIFAVI
Trigger: AATCACAGCAAATATTCTAAGAGAGAAAGTCTGAGATGAGGACCAAGAATTGAAAGAGTTGGACAAGCATTTGCGGAAACTCCTCACCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR GCA 90 bp CCACTGGGAAGCCTCTGTAGGGTGTGCGTGATGGCGGTCTCCCTGTCGGGAGAGGGGACAGTTTCACTGTaGTCAGAACAGGGAAGAGGG +
Preference number: 2 (lower is better)
Translates to: PLGSLCRVCVMAVSLSGEGTVSL*SEQGRG
Trigger: CCCTCTTCCCTGTTCTGAGCACAGTGAAACTGTCCC...CTCTCCCGACAGGGAGACCGCCATCACGCACACCCTACAGAGGCTTCCCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR-3UTR CCA 90 bp CCACTGGGAAGCCTCTGTAGGGTGTGCGTGATGGCGGTCTCCCTGTCGGGAGAGCGCCCGCTGATGTCTTaGGCTTTTGTTTCTTCCCAG +
Preference number: 2 (lower is better)
Translates to: PLGSLCRVCVMAVSLSGERPLMS*AFVSSQ
Trigger: CTGGGAAGAAACAAAAGCCCAAGACATCAGCGGGCG...CTCTCCCGACAGGGAGACCGCCATCACGCACACCCTACAGAGGCTTCCCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR-3UTR TCA 90 bp GAGAGATACTGCCCGCCCGCTGATGTCTTGGGCTTTTGTTTCTTCCCAGGCGGACACGGTGGCTGGCTTTaGACTGCTGCTGCAGAAGCA +
Preference number: 2 (lower is better)
Translates to: ERYCPPADVLGFCFFPGGHGGWL*TAAAEA
Trigger: TGCTTCTGCAGCAGCAGTTCAAAGCCAGCCACCGTG...TCCGCCTGGGAAGAAACAAAAGCCCAAGACATCAGCGGGCGGGCAGTATCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR-3UTR GCA 90 bp CTGAGCCTGGCCTTGACTGGTTGTCCCTCTTCAGCCTCTGTAGGTCAGGTCAAAAATGGACAGCCTGGCTaGCTCCCCACCAGACCACAG +
Preference number: 2 (lower is better)
Translates to: LSLALTGCPSSASVGQVKNGQPG*LPTRPQ
Trigger: CTGTGGTCTGGTGGGGAGGCAGCCAGGCTGTCCATT...TTTGACCTGACCTACAGAGGCTGAAGAGGGACAACCAGTCAAGGCCAGGCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR GCA 90 bp CTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCTTCCCTGCCCTGGTGCCTAGGGATCCTCAGTTaGCAAGCTGTGGTGATGGAC +
Preference number: 2 (lower is better)
Translates to: LCRHSGASSSAHSSLPWCLGILS*QAVVMD
Trigger: GTCCATCACCACAGCTTGGCAACTGAGGATCCCTAG...GCACCAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CAA 90 bp CTGATCTGGAAAGGATCCGAGAGATACTGCCCGCCCGCTGATGTCTaGGGCTTTTGTTTCTTCCCAGGCGGACAAGAAGGACCCACAAGG +
Preference number: 2 (lower is better)
Translates to: LIWKGSERYCPPADV*GFCFFPGGQEGPTR
Trigger: CCTTGTGGGTCCTTCTTGTCCGCCTGGGAAGAAACAAAAGCCCAAGACATCAGCGGGCGGGCAGTATCTCTCGGATCCTTTCCAGATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR-3UTR TCA 90 bp GCCACCTTCAGCAAGTCCACACTCAGACAGGGCTTCCCTCACCTTATTCCCTCACTGGAGCAGGAAATCTaGCCATCAAAGGGTCAGTGG +
Preference number: 2 (lower is better)
Translates to: ATFSKSTLRQGFPHLIPSLEQEI*PSKGQW
Trigger: CCACTGACCCTTTGATGGTCAGATTTCCTGCTCCAG...TGAGGGAATAAGGTGAGGGAAGCCCTGTCTGAGTGTGGACTTGCTGAAGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR CCA 90 bp CTGCAGCATACTTCACCATGGACACATACCCAACCCAGACAGCATACCCCACCAGAAAGAGGAGGACCCTaGGCTCAGCAACCTCTTTCC +
Preference number: 2 (lower is better)
Translates to: LQHTSPWTHTQPRQHTPPERGGP*AQQPLS
Trigger: GGAAAGAGGTTGCTGAGCCCAGGGTCCTCCTCTTTC...TGGTGGGGTATGCTGTCTGGGTTGGGTATGTGTCCATGGTGAAGTATGCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR TCA 90 bp CATTCTGGGGCTTCATCTTCTGCACACTCTTCCCTGCCCTGGTGCCAACATCCTGGGTTTTACCAAGGGTaGGGAGTTTCCGCAAATGCT +
Preference number: 2 (lower is better)
Translates to: HSGASSSAHSSLPWCQHPGFYQG*GVSANA
Trigger: AGCATTTGCGGAAACTCCTCACCCTTGGTAAAACCC...AGGATGTTGGCACCAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCCAGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR GCA 90 bp TCTTGGGCTTTTGTTTCTTCCCAGGCGGACAAGAAGGACCCACAAGGCAATGGCTGGCTGGCTTTGAACTaGTGCTGCAGAAGCAACTGG +
Preference number: 2 (lower is better)
Translates to: SWAFVSSQADKKDPQGNGWLALN*CCRSNW
Trigger: CCAGTTGCTTCTGCAGCAGCAGTTCAAAGCCAGCCA...GCCATTGCCTTGTGGGTCCTTCTTGTCCGCCTGGGAAGAAACAAAAGCCCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR-3UTR GCA 90 bp CATTCTGGGGCTTCATCTTCTGCACACTCTTCCCTGCCCTGGTGCCAACATCCTCTCCCTCAGTCACCTTaGTTCCTCTTGTCTTGTGAC +
Preference number: 2 (lower is better)
Translates to: HSGASSSAHSSLPWCQHPLPQSP*FLLSCD
Trigger: GTCACAAGACAAGAGGAAGCAAGGTGACTGAGGGAG...AGGATGTTGGCACCAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCCAGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR TCA 90 bp AGAGTCATTGGAGCACACTGCTCTTGCTGGTCTGCCTTTGAGCCAATGAGTCACATACTGCCCGCCCGCTaGTGTCTTGGGCTTTTGTTT +
Preference number: 2 (lower is better)
Translates to: RVIGAHCSCWSAFEPMSHILPAR*CLGLLF
Trigger: AAACAAAAGCCCAAGACATCAGCGGGCGGGCAGTAT...GTGACTCATTGGCTCAAAGGCAGACCAGCAAGAGCAGTGTGCTCCAATGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR-3UTR TCA 90 bp AGGGCATGGTTGAAATCTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCGTCTTTGCTTCCCTCTaGAAATCCACAAGCCAGCCC +
Preference number: 2 (lower is better)
Translates to: RAWLKSMPAFWGFIFCTLVFASL*KSTSQP
Trigger: GGGCTGGCTTGTGGATTTTCAGAGGGAAGCAAAGAC...GAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAGATTTCAACCATGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR GCA 90 bp CTGCAGCATACTTCACCATGGACACATACCCAACCCAGACAGCATACCCCACCAACAGCATCTATCTGCTaGCTGACTTCCTGGTTTGCC +
Preference number: 2 (lower is better)
Translates to: LQHTSPWTHTQPRQHTPPTASIC*LTSWFA
Trigger: GGCAAACCAGGAAGTCAGGCAGCAGATAGATGCTGT...TGGTGGGGTATGCTGTCTGGGTTGGGTATGTGTCCATGGTGAAGTATGCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR CCA 90 bp CTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCTTCCCTGCCCTGGTGCTACCAATTGCTGTCCTaGTCTCCTTTCTTTTGCCAT +
Preference number: 2 (lower is better)
Translates to: LCRHSGASSSAHSSLPWCYQLLS*SPFFCH
Trigger: ATGGCAAAAGAAAGGAGACCAGGACAGCAATTGGTA...GCACCAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR TCA 90 bp GCCACCTTCAGCAAGTCCACACTCAGACAGGGCTTCCCTCACCTTATTCCCTCACTTCCACATCAGCCATaGATCAAGAAAATGCTCCCA +
Preference number: 2 (lower is better)
Translates to: ATFSKSTLRQGFPHLIPSLPHQP*IKKMLP
Trigger: TGGGAGCATTTTCTTGATTCATGGCTGATGTGGAAG...TGAGGGAATAAGGTGAGGGAAGCCCTGTCTGAGTGTGGACTTGCTGAAGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR CCA 90 bp GGCTGCCTCCCCACCAGACCACAGCTTTTGATTCCAAGGAATACCTCCTCCCAGCAGAGGCAAGAACTATaGAGGAATGCTTTTTACTGG +
Preference number: 2 (lower is better)
Translates to: GCLPTRPQLLIPRNTSSQQRQEL*RNAFYW
Trigger: CCAGTAAAAAGCATTCCTCCATAGTTCTTGCCTCTG...CTGGGAGGAGGTATTCCTTGGAATCAAAAGCTGTGGTCTGGTGGGGAGGCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR CCA 90 bp GCCACCTTCAGCAAGTCCACACTCAGACAGGGCTTCCCTCACCTTATTCCCTCATGCTCTCTTATCAAGTaGAATTGTCAGTCCCAGCTG +
Preference number: 2 (lower is better)
Translates to: ATFSKSTLRQGFPHLIPSCSLIK*NCQSQL
Trigger: CAGCTGGGACTGACAATTCCACTTGATAAGAGAGCA...TGAGGGAATAAGGTGAGGGAAGCCCTGTCTGAGTGTGGACTTGCTGAAGGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR CCA 90 bp AGGGCATGGTTGAAATCTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCCAGTATACCCAGCCATaGACACACATACACCTTGCC +
Preference number: 2 (lower is better)
Translates to: RAWLKSMPAFWGFIFCTLQYTQP*THIHLA
Trigger: GGCAAGGTGTATGTGTGTCCATGGCTGGGTATACTG...GAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAGATTTCAACCATGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR TCA 90 bp TCACTCCTTGCCAACTGCACAATGTTTCCACAAACAGTTCCTCCCTCAGTCACCAGTAAAGACAGAGTGTaGACTCCAGGAGGAGCAGAG +
Preference number: 2 (lower is better)
Translates to: SLLANCTMFPQTVPPSVTSKDRV*TPGGAE
Trigger: CTCTGCTCCTCCTGGAGTTCACACTCTGTCTTTACT...GGTGACTGAGGGAGGAACTGTTTGTGGAAACATTGTGCAGTTGGCAAGGAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR TCA 90 bp AGGGCATGGTTGAAATCTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCCCAGACCACAGCTTTTaGTTCCAAGGAATACCTCCT +
Preference number: 2 (lower is better)
Translates to: RAWLKSMPAFWGFIFCTLPDHSF*FQGIPP
Trigger: AGGAGGTATTCCTTGGAATCAAAAGCTGTGGTCTGG...GAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAGATTTCAACCATGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR GCA 90 bp AGGGCATGGTTGAAATCTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCGACCCAGAGAGTCTTTaGTTCCCTCTGAAAATCCAC +
Preference number: 2 (lower is better)
Translates to: RAWLKSMPAFWGFIFCTLDPESL*FPLKIH
Trigger: GTGGATTTTCAGAGGGAAGCAAAGACTCTCTGGGTC...GAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAGATTTCAACCATGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR CCA 90 bp TCACTCCTTGCCAACTGCACAATGTTTCCACAAACAGTTCCTCCCTCAGTCACCAATGGGGATAGTGAATaGAAAGAGGAGGACCCTGGG +
Preference number: 2 (lower is better)
Translates to: SLLANCTMFPQTVPPSVTNGDSE*KEEDPG
Trigger: CCCAGGGTCCTCCTCTTTCCATTCACTATCCCCATT...GGTGACTGAGGGAGGAACTGTTTGTGGAAACATTGTGCAGTTGGCAAGGAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR TCA 90 bp GCCACCTTCAGCAAGTCCACACTCAGACAGGGCTTCCCTCACCTTATTCCCTCATCACATTCCAATCACTaGGTAAAGACAGAGTGTGAA +
Preference number: 2 (lower is better)
Translates to: ATFSKSTLRQGFPHLIPSSHSNH*VKTECE
Trigger: TTCACACTCTGTCTTTACTCAGTGATTGGAATGTGA...TGAGGGAATAAGGTGAGGGAAGCCCTGTCTGAGTGTGGACTTGCTGAAGGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR GCA 90 bp ATAGAGCCTGGGGCTTCTTATGCCACCTTCAGCAAGTCCACACTCAGACAGGGCGTTGCTCCCTTAAATTaGTACTTGTTCAGCATTTGG +
Preference number: 2 (lower is better)
Translates to: IEPGASYATFSKSTLRQGVAPLN*YLFSIW
Trigger: CCAAATGCTGAACAAGTAGCAATTTAAGGGAGCAAC...GCCCTGTCTGAGTGTGGACTTGCTGAAGGTGGCATAAGAAGCCCCAGGCTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR GCA 90 bp CATTCTGGGGCTTCATCTTCTGCACACTCTTCCCTGCCCTGGTGCCAACATCCTTGGTCTCCTTTCTTTTaGCATGATAAACATCACGAC +
Preference number: 2 (lower is better)
Translates to: HSGASSSAHSSLPWCQHPWSPFF*HDKHHD
Trigger: GTCGTGATGTTTATCATGGCAAAAGAAAGGAGACCA...AGGATGTTGGCACCAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCCAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR GCA 90 bp CTGAGCCTGGCCTTGACTGGTTGTCCCTCTTCAGCCTCTGTAGGTCAGGTCAAACCCAGAAGATTCTGTTaGAATGACAATGCTCTCTTA +
Preference number: 2 (lower is better)
Translates to: LSLALTGCPSSASVGQVKPRRFC*NDNALL
Trigger: TAAGAGAGCATTGTCATTGCAACAGAATCTTCTGGG...TTTGACCTGACCTACAGAGGCTGAAGAGGGACAACCAGTCAAGGCCAGGCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR CCA 90 bp CATGATCATCCAGGCCTTTTCCTCTTCATAGAAACATCCTCTCACTCGCAGAGTATCTTCAGTGCCCACTaGGAAGCCTCTGTAGGGTGT +
Preference number: 2 (lower is better)
Translates to: HDHPGLFLFIETSSHSQSIFSAH*EASVGC
Trigger: ACACCCTACAGAGGCTTCCCAGTGGGCACTGAAGAT...ACTCTGCGAGTGAGAGGATGTTTCTATGAAGAGGAAAAGGCCTGGATGATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR-3UTR CCA 90 bp CTCCCCACCAGACCACAGCTTTTGATTCCAAGGAATACCTCCTCCCAGAAGATTAGGCAGGAGGGACTGTaGGCATTATATAGACTCACT +
Preference number: 2 (lower is better)
Translates to: LPTRPQLLIPRNTSSQKIRQEGL*ALYRLT
Trigger: AGTGAGTCTATATAATGCCCACAGTCCCTCCTGCCT...AATCTTCTGGGAGGAGGTATTCCTTGGAATCAAAAGCTGTGGTCTGGTGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR CCA 90 bp AGGGCATGGTTGAAATCTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCCAGTATACCCAACCATaGACACATATCTCAACCAGG +
Preference number: 2 (lower is better)
Translates to: RAWLKSMPAFWGFIFCTLQYTQP*THISTR
Trigger: CCTGGTTGAGATATGTGTCCATGGTTGGGTATACTG...GAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAGATTTCAACCATGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR GCA 90 bp ACCCACAGTGGGATGGACTCTTCCACATCAGCCATGAATCAAGAAAATGCTCCCAAGTTGACAAAAGCTTaGCCACATGCCCACAACACT +
Preference number: 2 (lower is better)
Translates to: THSGMDSSTSAMNQENAPKLTKA*PHAHNT
Trigger: AGTGTTGTGGGCATGTGGGCAAGCTTTTGTCAACTT...GGGAGCATTTTCTTGATTCATGGCTGATGTGGAAGAGTCCATCCCACTGTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR GCA 90 bp TCACTCCTTGCCAACTGCACAATGTTTCCACAAACAGTTCCTCCCTCAGTCACCCATGAATCAAGAAAATaGTCCCACAGACCAGCCTAC +
Preference number: 2 (lower is better)
Translates to: SLLANCTMFPQTVPPSVTHESRK*SHRPAY
Trigger: GTAGGCTGGTCTGTGGGAGCATTTTCTTGATTCATG...GGTGACTGAGGGAGGAACTGTTTGTGGAAACATTGTGCAGTTGGCAAGGAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR CCA 90 bp CTCCCCACCAGACCACAGCTTTTGATTCCAAGGAATACCTCCTCCCAGAAGATTAACCAACGGACATTCTaGAAAATATGCATGGTGGGG +
Preference number: 2 (lower is better)
Translates to: LPTRPQLLIPRNTSSQKINQRTF*KICMVG
Trigger: CCCCACCATGCATATTTTCCAGAATGTCCGTTGGTT...AATCTTCTGGGAGGAGGTATTCCTTGGAATCAAAAGCTGTGGTCTGGTGGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR CCA 90 bp CCTGGTCTCCTTTCTTTTGCCATGATAAACATCACGACTGAAAAACAAGTTGGGTCCCTCCATCCTGCCTaGGTTTTACCAAGGGTGAGG +
Preference number: 2 (lower is better)
Translates to: PGLLSFAMINITTEKQVGSLHPA*VLPRVR
Trigger: CCTCACCCTTGGTAAAACCCAGGCAGGATGGAGGGA...CCCAACTTGTTTTTCAGTCGTGATGTTTATCATGGCAAAAGAAAGGAGACCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CAA 90 bp CATCCTGCCTGGGTTTTACCAAGGGTGAGGAGTTTCCGCAAATGCTaGTCCAACTCTTTCAATTCTTGGTCCTCATCTCAGACTTTCTCT +
Preference number: 2 (lower is better)
Translates to: HPAWVLPRVRSFRKC*SNSFNSWSSSQTFS
Trigger: AGAGAAAGTCTGAGATGAGGACCAAGAATTGAAAGAGTTGGACAAGCATTTGCGGAAACTCCTCACCCTTGGTAAAACCCAGGCAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR GCA 90 bp CTCCCCACCAGACCACAGCTTTTGATTCCAAGGAATACCTCCTCCCAGAAGATTAGGAGTTTCCGCAAATaGTTGTCCAACTCTTTCAAT +
Preference number: 2 (lower is better)
Translates to: LPTRPQLLIPRNTSSQKIRSFRK*LSNSFN
Trigger: ATTGAAAGAGTTGGACAAGCATTTGCGGAAACTCCT...AATCTTCTGGGAGGAGGTATTCCTTGGAATCAAAAGCTGTGGTCTGGTGGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR TCA 90 bp TCACGACTGAAAAACAAGTTGGGGAGGAAAGGGTTAATTTGGCTTACACTTCCAAAGGGAGATGAGACTTaGCAGAACAGGAAGAGAAGT +
Preference number: 2 (lower is better)
Translates to: SRLKNKLGRKGLIWLTLPKGDET*QNRKRS
Trigger: ACTTCTCTTCCTGTTCTGTCAAGTCTCATCTCCCTT...TGGAAGTGTAAGCCAAATTAACCCTTTCCTCCCCAACTTGTTTTTCAGTCGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR TCA 90 bp TCACGACTGAAAAACAAGTTGGGGAGGAAAGGGTTAATTTGGCTTACACTTCCAAGGTTTGTGTCAAGTTaGCAAAAGCTTGCCCACATG +
Preference number: 2 (lower is better)
Translates to: SRLKNKLGRKGLIWLTLPRFVSS*QKLAHM
Trigger: CATGTGGGCAAGCTTTTGTCAACTTGACACAAACCT...TGGAAGTGTAAGCCAAATTAACCCTTTCCTCCCCAACTTGTTTTTCAGTCGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR CCA 90 bp GGCAAGAACTATGGAGGAATGCTTTTTACTGGCTTGTTCATCATGGCTCACTCTAACTCTTTCAATTCTTaGTCCTCATCTCAGACTTTC +
Preference number: 2 (lower is better)
Translates to: GKNYGGMLFTGLFIMAHSNSFNS*SSSQTF
Trigger: GAAAGTCTGAGATGAGGACCAAGAATTGAAAGAGTT...AGAGTGAGCCATGATGAACAAGCCAGTAAAAAGCATTCCTCCATAGTTCTTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CAA 90 bp CTAAGTTCACATATAATGGAATGTCTTAAGTTTCCTTTGCTGAGCTaGGCAGCTCTGTTTGAGAAGTCTCAAAGCAGTATTTCTGTCTAC +
Preference number: 2 (lower is better)
Translates to: LSSHIMECLKFPLLS*AALFEKSQSSISVY
Trigger: GTAGACAGAAATACTGCTTTGAGACTTCTCAAACAGAGCTGCCAAGCTCAGCAAAGGAAACTTAAGACATTCCATTATATGTGAACTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CAA 90 bp GGATACTGTCTAAGTTCACATATAATGGAATGTCTTAAGTTTCCTTaGCTGAGCTTGGCAGCTCTGTTTGAGAAGTCTCAAAGCAGTATT +
Preference number: 2 (lower is better)
Translates to: GYCLSSHIMECLKFP*LSLAALFEKSQSSI
Trigger: AATACTGCTTTGAGACTTCTCAAACAGAGCTGCCAAGCTCAGCAAAGGAAACTTAAGACATTCCATTATATGTGAACTTAGACAGTATCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR GCA 72 bp ATGGCGGTCTCCCTGTCGGGAGAGGTGTCCATGGCATaGCCGGAGGCTCCTGGATCAGCGTGGCTGAGGGGA +
Preference number: 3 (lower is better)
Translates to: MAVSLSGEVSMA*PEAPGSAWLRG
Trigger: TCCCCTCAGCCACGCTGATCCAGGAGCCTCCGGGCATGCCATGGACACCTCTCCCGACAGGGAGACCGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR CCA 72 bp GTCGGGAGAGGTGTCCATGGCATGCCCGGAGGCTCCTaGATCAGCGTGGCTGAGGGGACAGTTTCACTGTGC +
Preference number: 3 (lower is better)
Translates to: VGRGVHGMPGGS*ISVAEGTVSLC
Trigger: GCACAGTGAAACTGTCCCCTCAGCCACGCTGATCCAGGAGCCTCCGGGCATGCCATGGACACCTCTCCCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR TCA 72 bp TTCAGTGCCCACTGGGAAGCCTCTGTAGGGTGTGCGTaGTGGCGGTCTCCCTGTCGGGAGAGGTGTCCATGG +
Preference number: 3 (lower is better)
Translates to: FSAHWEASVGCA*WRSPCRERCPW
Trigger: CCATGGACACCTCTCCCGACAGGGAGACCGCCATCACGCACACCCTACAGAGGCTTCCCAGTGGGCACTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR GCA 72 bp CATCTTCAGTGCCCACTGGGAAGCCTCTGTAGGGTGTaGGTGATGGCGGTCTCCCTGTCGGGAGAGGTGTCC +
Preference number: 3 (lower is better)
Translates to: HLQCPLGSLCRV*VMAVSLSGEVS
Trigger: GGACACCTCTCCCGACAGGGAGACCGCCATCACGCACACCCTACAGAGGCTTCCCAGTGGGCACTGAAGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR CCA 72 bp GTGTCCATGGCATGCCCGGAGGCTCCTGGATCAGCGTaGCTGAGGGGACAGTTTCACTGTGCTCAGAACAGG +
Preference number: 3 (lower is better)
Translates to: VSMACPEAPGSA*LRGQFHCAQNR
Trigger: CCTGTTCTGAGCACAGTGAAACTGTCCCCTCAGCCACGCTGATCCAGGAGCCTCCGGGCATGCCATGGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR-3UTR CAA 90 bp GAAGCCCTTCACAGTGAGCAGGGTTTCTGCAAGCAGCAGCAGTTCCCTGGGCTGGCACGGTGGCTGGCTTaGAACTGCTGCTGCAGAAGC +
Preference number: 3 (lower is better)
Translates to: EALHSEQGFCKQQQFPGLARWLA*NCCCRS
Trigger: GCTTCTGCAGCAGCAGTTCAAAGCCAGCCACCGTGC...CAGCCCAGGGAACTGCTGCTGCTTGCAGAAACCCTGCTCACTGTGAAGGGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR TCA 72 bp AGCAGGGTTTCTGCAAGCAGCAGCAGTTCCCTGGGCTaGTCTGGAAAGGATCCGAGAGATACTGCCCGCCCG +
Preference number: 3 (lower is better)
Translates to: SRVSASSSSSLG*SGKDPRDTARP
Trigger: CGGGCGGGCAGTATCTCTCGGATCCTTTCCAGATCAGCCCAGGGAACTGCTGCTGCTTGCAGAAACCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR GCA 72 bp CACAAGGCAATGGCACGGTGGCTGGCTTTGAACTGCTaGTGCAGAAGCAACTGGCCAGCACAGCCCTTGCAG +
Preference number: 3 (lower is better)
Translates to: HKAMARWLALNC*CRSNWPAQPLQ
Trigger: CTGCAAGGGCTGTGCTGGCCAGTTGCTTCTGCAGCAGCAGTTCAAAGCCAGCCACCGTGCCATTGCCTTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR GCA 72 bp ACCCACAAGGCAATGGCACGGTGGCTGGCTTTGAACTaGTGCTGCAGAAGCAACTGGCCAGCACAGCCCTTG +
Preference number: 3 (lower is better)
Translates to: THKAMARWLALN*CCRSNWPAQPL
Trigger: CAAGGGCTGTGCTGGCCAGTTGCTTCTGCAGCAGCAGTTCAAAGCCAGCCACCGTGCCATTGCCTTGTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR GCA 72 bp GCCCAGGTTTGCCACCAGCCTAATGGACAGCCTGGCTaGCTCCCCACCAGACCACAGCTTTTGATTCCAAGG +
Preference number: 3 (lower is better)
Translates to: AQVCHQPNGQPG*LPTRPQLLIPR
Trigger: CCTTGGAATCAAAAGCTGTGGTCTGGTGGGGAGGCAGCCAGGCTGTCCATTAGGCTGGTGGCAAACCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR GCA 72 bp TCTATCTGCTGCCTGACTTCCTGGTTTGCCCAGGTTTaGCACCAGCCTAATGGACAGCCTGGCTGCCTCCCC +
Preference number: 3 (lower is better)
Translates to: SICCLTSWFAQV*HQPNGQPGCLP
Trigger: GGGGAGGCAGCCAGGCTGTCCATTAGGCTGGTGGCAAACCTGGGCAAACCAGGAAGTCAGGCAGCAGATAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR GCA 72 bp AAGGCAATGGCACGGTGGCTGGCTTTGAACTGCTGCTaGAGAAGCAACTGGCCAGCACAGCCCTTGCAGTTT +
Preference number: 3 (lower is better)
Translates to: KAMARWLALNCC*RSNWPAQPLQF
Trigger: AAACTGCAAGGGCTGTGCTGGCCAGTTGCTTCTGCAGCAGCAGTTCAAAGCCAGCCACCGTGCCATTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR GCA 72 bp TGGTGTGCCCCAGATGAGCAGCAAATGCAGAGTAGCTaGTCCCTCCATCCTGCCTGGGTTTTACCAAGGGTG +
Preference number: 3 (lower is better)
Translates to: WCAPDEQQMQSS*SLHPAWVLPRV
Trigger: CACCCTTGGTAAAACCCAGGCAGGATGGAGGGAGCAGCTACTCTGCATTTGCTGCTCATCTGGGGCACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR GCA 72 bp TCCAAGGAGAGTGGTGTGCCCCAGATGAGCAGCAAATaGAGAGTAGCTGCTCCCTCCATCCTGCCTGGGTTT +
Preference number: 3 (lower is better)
Translates to: SKESGVPQMSSK*RVAAPSILPGF
Trigger: AAACCCAGGCAGGATGGAGGGAGCAGCTACTCTGCATTTGCTGCTCATCTGGGGCACACCACTCTCCTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR TCA 72 bp GATCTGGAAAGGATCCGAGAGATACTGCCCGCCCGCTaGTGTCTTGGGCTTTTGTTTCTTCCCAGGCGGACA +
Preference number: 3 (lower is better)
Translates to: DLERIREILPAR*CLGLLFLPRRT
Trigger: TGTCCGCCTGGGAAGAAACAAAAGCCCAAGACATCAGCGGGCGGGCAGTATCTCTCGGATCCTTTCCAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR GCA 72 bp TCCTGGATCAGCGTGGCTGAGGGGACAGTTTCACTGTaGTCAGAACAGGGAAGAGGGTTCATGAAGCCCTTC +
Preference number: 3 (lower is better)
Translates to: SWISVAEGTVSL*SEQGRGFMKPF
Trigger: GAAGGGCTTCATGAACCCTCTTCCCTGTTCTGAGCACAGTGAAACTGTCCCCTCAGCCACGCTGATCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR GCA 72 bp CCTCTCACTCGCAGAGTCATTGGAGCACACTGCTCTTaGTGGTCTGCCTTTGAGCCAATGAGTCACTCAGCC +
Preference number: 3 (lower is better)
Translates to: PLTRRVIGAHCS*WSAFEPMSHSA
Trigger: GGCTGAGTGACTCATTGGCTCAAAGGCAGACCAGCAAGAGCAGTGTGCTCCAATGACTCTGCGAGTGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR CCA 72 bp AAGGATCCGAGAGATACTGCCCGCCCGCTGATGTCTTaGGCTTTTGTTTCTTCCCAGGCGGACAAGAAGGAC +
Preference number: 3 (lower is better)
Translates to: KDPRDTARPLMS*AFVSSQADKKD
Trigger: GTCCTTCTTGTCCGCCTGGGAAGAAACAAAAGCCCAAGACATCAGCGGGCGGGCAGTATCTCTCGGATCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR CCA 72 bp CTCACTCGCAGAGTCATTGGAGCACACTGCTCTTGCTaGTCTGCCTTTGAGCCAATGAGTCACTCAGCCCGT +
Preference number: 3 (lower is better)
Translates to: LTRRVIGAHCSC*SAFEPMSHSAR
Trigger: ACGGGCTGAGTGACTCATTGGCTCAAAGGCAGACCAGCAAGAGCAGTGTGCTCCAATGACTCTGCGAGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR CCA 72 bp CCAGGACCACCTGCTAGTGGATGGCACCACCCACAGTaGGATGGACTCTTCCACATCAGCCATGAATCAAGA +
Preference number: 3 (lower is better)
Translates to: PGPPASGWHHPQ*DGLFHISHESR
Trigger: TCTTGATTCATGGCTGATGTGGAAGAGTCCATCCCACTGTGGGTGGTGCCATCCACTAGCAGGTGGTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CCA 72 bp TGGCTCACCCTTGTCCTGGTGACTGACCACCATCAGTaGCTCACCTTAGTCCTGGCCTTGCTTTCAAGTCTC +
Preference number: 3 (lower is better)
Translates to: WLTLVLVTDHHQ*LTLVLALLSSL
Trigger: GAGACTTGAAAGCAAGGCCAGGACTAAGGTGAGCCACTGATGGTGGTCAGTCACCAGGACAAGGGTGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR CAA 90 bp CTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCTTCCCTGCCCTGGTGCGAGACACGCCTTTCATaGTGCCTTAGGACATTTGCA +
Preference number: 3 (lower is better)
Translates to: LCRHSGASSSAHSSLPWCETRLS*CLRTFA
Trigger: TGCAAATGTCCTAAGGCACAATGAAAGGCGTGTCTC...GCACCAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR TCA 72 bp GAGCACACTGCTCTTGCTGGTCTGCCTTTGAGCCAATaGGTCACTCAGCCCGTTTATCCCAGAGAAAGGCGT +
Preference number: 3 (lower is better)
Translates to: EHTALAGLPLSQ*VTQPVYPRERR
Trigger: ACGCCTTTCTCTGGGATAAACGGGCTGAGTGACTCATTGGCTCAAAGGCAGACCAGCAAGAGCAGTGTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR GCA 72 bp GGGGCTTCATCTTCTGCACACTCTTCCCTGCCCTGGTaGCAACATCCTATCCTTAGAAGTAGCCTGTGGACT +
Preference number: 3 (lower is better)
Translates to: GASSSAHSSLPW*QHPILRSSLWT
Trigger: AGTCCACAGGCTACTTCTAAGGATAGGATGTTGGCACCAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR GCA 72 bp GGCATTCTGGGGCTTCATCTTCTGCACACTCTTCCCTaGCCTGGTGCCAACATCCTATCCTTAGAAGTAGCC +
Preference number: 3 (lower is better)
Translates to: GILGLHLLHTLP*PGANILSLEVA
Trigger: GGCTACTTCTAAGGATAGGATGTTGGCACCAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCCAGAATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CCA 72 bp GCTTTCTTACATAACCCAGGACCACCTGCTAGTGGATaGCACCACCCACAGTGGGATGGACTCTTCCACATC +
Preference number: 3 (lower is better)
Translates to: AFLHNPGPPASG*HHPQWDGLFHI
Trigger: GATGTGGAAGAGTCCATCCCACTGTGGGTGGTGCCATCCACTAGCAGGTGGTCCTGGGTTATGTAAGAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CCA 72 bp TCACAAAGGCCCAATGAGCCTGGCAGCTATAGAGCCTaGGGCTTCTTATGCCACCTTCAGCAAGTCCACACT +
Preference number: 3 (lower is better)
Translates to: SQRPNEPGSYRA*GFLCHLQQVHT
Trigger: AGTGTGGACTTGCTGAAGGTGGCATAAGAAGCCCCAGGCTCTATAGCTGCCAGGCTCATTGGGCCTTTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CCA 72 bp TCTGGGGCTTCATCTTCTGCACACTCTTCCCTGCCCTaGTGCCAACATCCTATCCTTAGAAGTAGCCTGTGG +
Preference number: 3 (lower is better)
Translates to: SGASSSAHSSLP*CQHPILRSSLW
Trigger: CCACAGGCTACTTCTAAGGATAGGATGTTGGCACCAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CCA 72 bp CAGACAAGGGCATGGTTGAAATCTATGCCGGCATTCTaGGGCTTCATCTTCTGCACACTCTTCCCTGCCCTG +
Preference number: 3 (lower is better)
Translates to: QTRAWLKSMPAF*GFIFCTLFPAL
Trigger: CAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAGATTTCAACCATGCCCTTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR TCA 72 bp AGTCATTGGAGCACACTGCTCTTGCTGGTCTGCCTTTaGGCCAATGAGTCACTCAGCCCGTTTATCCCAGAG +
Preference number: 3 (lower is better)
Translates to: SHWSTLLLLVCL*ANESLSPFIPE
Trigger: CTCTGGGATAAACGGGCTGAGTGACTCATTGGCTCAAAGGCAGACCAGCAAGAGCAGTGTGCTCCAATGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR TCA 72 bp GCTGCTCCCTCCATCCTGCCTGGGTTTTACCAAGGGTaGGGAGTTTCCGCAAATGCTTGTCCAACTCTTTCA +
Preference number: 3 (lower is better)
Translates to: AAPSILPGFYQG*GVSANACPTLS
Trigger: TGAAAGAGTTGGACAAGCATTTGCGGAAACTCCTCACCCTTGGTAAAACCCAGGCAGGATGGAGGGAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR TCA 72 bp CCACCCACAGTGGGATGGACTCTTCCACATCAGCCATaGATCAAGAAAATGCTCCCACAGACCAGCCTACAG +
Preference number: 3 (lower is better)
Translates to: PPTVGWTLPHQP*IKKMLPQTSLQ
Trigger: CTGTAGGCTGGTCTGTGGGAGCATTTTCTTGATTCATGGCTGATGTGGAAGAGTCCATCCCACTGTGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CCA 72 bp TCATTGAGATTATCAGAGGTGACTGACCACCGTCAGTaGCTCACCCTTGTCCTGGTGACTGACCACCATCAG +
Preference number: 3 (lower is better)
Translates to: SLRLSEVTDHRQ*LTLVLVTDHHQ
Trigger: CTGATGGTGGTCAGTCACCAGGACAAGGGTGAGCCACTGACGGTGGTCAGTCACCTCTGATAATCTCAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR CAA 90 bp ACCCACAGTGGGATGGACTCTTCCACATCAGCCATGAATCAAGAAAATGCTCCCGTGGGTTCCACTCACTaGAATTTAGGGCAAGGCCCC +
Preference number: 3 (lower is better)
Translates to: THSGMDSSTSAMNQENAPVGSTH*NLGQGP
Trigger: GGGGCCTTGCCCTAAATTCAAGTGAGTGGAACCCAC...GGGAGCATTTTCTTGATTCATGGCTGATGTGGAAGAGTCCATCCCACTGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR CAA 90 bp GGCCTTTTCCTCTTCATAGAAACATCCTCTCACTCGCAGAGTCATTGGAGCACACCGCCCGCTGATGTCTaGGGCTTTTGTTTCTTCCCA +
Preference number: 3 (lower is better)
Translates to: GLFLFIETSSHSQSHWSTPPADV*GFCFFP
Trigger: TGGGAAGAAACAAAAGCCCAAGACATCAGCGGGCGG...TGTGCTCCAATGACTCTGCGAGTGAGAGGATGTTTCTATGAAGAGGAAAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR-3UTR CAA 90 bp GGCTGCCTCCCCACCAGACCACAGCTTTTGATTCCAAGGAATACCTCCTCCCAGCGACTGAAAAACAAGTaGGGGAGGAAAGGGTTAATT +
Preference number: 3 (lower is better)
Translates to: GCLPTRPQLLIPRNTSSQRLKNK*GRKGLI
Trigger: AATTAACCCTTTCCTCCCCAACTTGTTTTTCAGTCG...CTGGGAGGAGGTATTCCTTGGAATCAAAAGCTGTGGTCTGGTGGGGAGGCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR CAA 90 bp CATTCTGGGGCTTCATCTTCTGCACACTCTTCCCTGCCCTGGTGCCAACATCCTTCACCTTGCTTCCTCTaGTCTTGTGACTTGTGTAAC +
Preference number: 3 (lower is better)
Translates to: HSGASSSAHSSLPWCQHPSPCFL*SCDLCN
Trigger: GTTACACAAGTCACAAGACAAGAGGAAGCAAGGTGA...AGGATGTTGGCACCAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCCAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR TCA 72 bp CCACCTCATAGTCCTACCACCATGCCTTCCCGACCTTaGTGGACTATGTTCTCAAGCTATGAGCCACATAGC +
Preference number: 3 (lower is better)
Translates to: PPHSPTTMPSRP*WTMFSSYEPHS
Trigger: GCTATGTGGCTCATAGCTTGAGAACATAGTCCATCAAGGTCGGGAAGGCATGGTGGTAGGACTATGAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR TCA 72 bp AACTGTCCAGCTCTTGCAGTAAAGCCCACTAAGCTTTaGGCACTCGGTGGCTTTTCCAGCCTGAGGTTCCAA +
Preference number: 3 (lower is better)
Translates to: NCPALAVKPTKL*ALGGFSSLRFQ
Trigger: TTGGAACCTCAGGCTGGAAAAGCCACCGAGTGCTCAAAGCTTAGTGGGCTTTACTGCAAGAGCTGGACAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR GCA 72 bp AAACATCCTCTCACTCGCAGAGTCATTGGAGCACACTaGTCTTGCTGGTCTGCCTTTGAGCCAATGAGTCAC +
Preference number: 3 (lower is better)
Translates to: KHPLTRRVIGAH*SCWSAFEPMSH
Trigger: GTGACTCATTGGCTCAAAGGCAGACCAGCAAGAGCAGTGTGCTCCAATGACTCTGCGAGTGAGAGGATGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR GCA 72 bp TTGAAATCTATGCCGGCATTCTGGGGCTTCATCTTCTaGACACTCTTCCCTGCCCTGGTGCCAACATCCTAT +
Preference number: 3 (lower is better)
Translates to: LKSMPAFWGFIF*TLFPALVPTSY
Trigger: ATAGGATGTTGGCACCAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAGATTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR CAA 90 bp AGGGCATGGTTGAAATCTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCGCTTGGCAGCTCTGTTaGAGAAGTCTCAAAGCAGTA +
Preference number: 3 (lower is better)
Translates to: RAWLKSMPAFWGFIFCTLAWQLC*RSLKAV
Trigger: TACTGCTTTGAGACTTCTCAAACAGAGCTGCCAAGC...GAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAGATTTCAACCATGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR CAA 90 bp CTGCAGCATACTTCACCATGGACACATACCCAACCCAGACAGCATACCCCACCACCCTTAAATTGCTACTaGTTCAGCATTTGGACACAG +
Preference number: 3 (lower is better)
Translates to: LQHTSPWTHTQPRQHTPPPLNCY*FSIWTQ
Trigger: CTGTGTCCAAATGCTGAACAAGTAGCAATTTAAGGG...TGGTGGGGTATGCTGTCTGGGTTGGGTATGTGTCCATGGTGAAGTATGCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR CAA 90 bp ATAGAGCCTGGGGCTTCTTATGCCACCTTCAGCAAGTCCACACTCAGACAGGGCAGTTGCTCCCTTAAATaGCTACTTGTTCAGCATTTG +
Preference number: 3 (lower is better)
Translates to: IEPGASYATFSKSTLRQGSCSLK*LLVQHL
Trigger: CAAATGCTGAACAAGTAGCAATTTAAGGGAGCAACT...GCCCTGTCTGAGTGTGGACTTGCTGAAGGTGGCATAAGAAGCCCCAGGCTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CCA 72 bp GAGTGTGAACTCCAGGAGGAGCAGAGGCAAGAACTATaGAGGAATGCTTTTTACTGGCTTGTTCATCATGGC +
Preference number: 3 (lower is better)
Translates to: ECELQEEQRQEL*RNAFYWLVHHG
Trigger: GCCATGATGAACAAGCCAGTAAAAAGCATTCCTCCATAGTTCTTGCCTCTGCTCCTCCTGGAGTTCACACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CCA 72 bp TGGACACATATCTCAACCAGGCAGTATACCCAACCATaGACACATATCTCAACCAGGCAGTATACCCAGCCA +
Preference number: 3 (lower is better)
Translates to: WTHISTRQYTQP*THISTRQYTQP
Trigger: TGGCTGGGTATACTGCCTGGTTGAGATATGTGTCCATGGTTGGGTATACTGCCTGGTTGAGATATGTGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CCA 72 bp TGGTCACATACCCAACCCAGACAACATACCCAACCATaGACACATATCTCAACCAGGCAGTATACCCAACCA +
Preference number: 3 (lower is better)
Translates to: WSHTQPRQHTQP*THISTRQYTQP
Trigger: TGGTTGGGTATACTGCCTGGTTGAGATATGTGTCCATGGTTGGGTATGTTGTCTGGGTTGGGTATGTGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CCA 72 bp AAGCAGTATTTCTGTCTACTGCAGCATACTTCACCATaGACACATACCCAACCCAGACAGCATACCCCACCA +
Preference number: 3 (lower is better)
Translates to: KQYFCLLQHTSP*THTQPRQHTPP
Trigger: TGGTGGGGTATGCTGTCTGGGTTGGGTATGTGTCCATGGTGAAGTATGCTGCAGTAGACAGAAATACTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR CAA 90 bp AGGGCATGGTTGAAATCTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCATGCTTTTTACTGGCTaGTTCATCATGGCTCACTCT +
Preference number: 3 (lower is better)
Translates to: RAWLKSMPAFWGFIFCTLMLFTG*FIMAHS
Trigger: AGAGTGAGCCATGATGAACAAGCCAGTAAAAAGCAT...GAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAGATTTCAACCATGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR-3UTR CAA 90 bp ACCATGGACACATATCTCAACCAGGCAGTATACCCAACCATGGACACATATCTCCGACCCAGAGAGTCTTaGCTTCCCTCTGAAAATCCA +
Preference number: 3 (lower is better)
Translates to: TMDTYLNQAVYPTMDTYLRPRES*LPSENP
Trigger: TGGATTTTCAGAGGGAAGCAAAGACTCTCTGGGTCG...GAGATATGTGTCCATGGTTGGGTATACTGCCTGGTTGAGATATGTGTCCATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR TCA 72 bp AAAACTCAAACGACCCAGAGAGTCTTTGCTTCCCTCTaGAAATCCACAAGCCAGCCCTCCATCAACTGTGTT +
Preference number: 3 (lower is better)
Translates to: KTQTTQRVFASL*KSTSQPSINCV
Trigger: AACACAGTTGATGGAGGGCTGGCTTGTGGATTTTCAGAGGGAAGCAAAGACTCTCTGGGTCGTTTGAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR TCA 72 bp GGAACACATTATCAGCATTGCAGACAAGGGCATGGTTaGAATCTATGCCGGCATTCTGGGGCTTCATCTTCT +
Preference number: 3 (lower is better)
Translates to: GTHYQHCRQGHG*NLCRHSGASSS
Trigger: AGAAGATGAAGCCCCAGAATGCCGGCATAGATTTCAACCATGCCCTTGTCTGCAATGCTGATAATGTGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR GCA 72 bp GCCTGGGTTTTACCAAGGGTGAGGAGTTTCCGCAAATaGTTGTCCAACTCTTTCAATTCTTGGTCCTCATCT +
Preference number: 3 (lower is better)
Translates to: AWVLPRVRSFRK*LSNSFNSWSSS
Trigger: AGATGAGGACCAAGAATTGAAAGAGTTGGACAAGCATTTGCGGAAACTCCTCACCCTTGGTAAAACCCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR GCA 72 bp GCTTGTCCCAACAGTAGCCCACTCTCTACTACCAATTaGTGTCCTGGTCTCCTTTCTTTTGCCATGATAAAC +
Preference number: 3 (lower is better)
Translates to: ACPNSSPLSTTN*CPGLLSFAMIN
Trigger: GTTTATCATGGCAAAAGAAAGGAGACCAGGACAGCAATTGGTAGTAGAGAGTGGGCTACTGTTGGGACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CCA 72 bp TTATCCCAGAGAAAGGCGTGGTTGGGCTTGCTCTTTTaGGTGATTTCCTTGCTTTTCCATCAAGATGGAGCA +
Preference number: 3 (lower is better)
Translates to: LSQRKAWLGLLF*VISLLFHQDGA
Trigger: TGCTCCATCTTGATGGAAAAGCAAGGAAATCACCCAAAAGAGCAAGCCCAACCACGCCTTTCTCTGGGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR-3UTR CAA 90 bp CTCCCCACCAGACCACAGCTTTTGATTCCAAGGAATACCTCCTCCCAGAAGATTGAGGAAAGGGTTAATTaGGCTTACACTTCCATATCA +
Preference number: 3 (lower is better)
Translates to: LPTRPQLLIPRNTSSQKIEERVN*AYTSIS
Trigger: TGATATGGAAGTGTAAGCCAAATTAACCCTTTCCTC...AATCTTCTGGGAGGAGGTATTCCTTGGAATCAAAAGCTGTGGTCTGGTGGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR TCA 72 bp ACAACTTATTTTATCATTGAGATTATCAGAGGTGACTaGCCACCGTCAGTGGCTCACCCTTGTCCTGGTGAC +
Preference number: 3 (lower is better)
Translates to: TTYFIIEIIRGD*PPSVAHPCPGD
Trigger: GTCACCAGGACAAGGGTGAGCCACTGACGGTGGTCAGTCACCTCTGATAATCTCAATGATAAAATAAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR GCA 72 bp AAGAGAATTAAAAGAATGAAGTGTACACATCTTCAGTaGCCACTGGGAAGCCTCTGTAGGGTGTGCGTGATG +
Preference number: 3 (lower is better)
Translates to: KRIKRMKCTHLQ*PLGSLCRVCVM
Trigger: CATCACGCACACCCTACAGAGGCTTCCCAGTGGGCACTGAAGATGTGTACACTTCATTCTTTTAATTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
3UTR GCA 72 bp GAACTTGATACTTTAAAGCTTCCTGTGGGGTTCCAGTaGACCCTACTTCCATCTCTAGAAGGAAGCCATACA +
Preference number: 3 (lower is better)
Translates to: ELDTLKLPVGFQ*TLLPSLEGSHT
Trigger: TGTATGGCTTCCTTCTAGAGATGGAAGTAGGGTGCACTGGAACCCCACAGGAAGCTTTAAAGTATCAAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CCA 72 bp AAAAGGAACACATTATCAGCATTGCAGACAAGGGCATaGTTGAAATCTATGCCGGCATTCTGGGGCTTCATC +
Preference number: 3 (lower is better)
Translates to: KRNTLSALQTRA*LKSMPAFWGFI
Trigger: GATGAAGCCCCAGAATGCCGGCATAGATTTCAACCATGCCCTTGTCTGCAATGCTGATAATGTGTTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR GCA 72 bp CTGTTTGAGAAGTCTCAAAGCAGTATTTCTGTCTACTaGAGCATACTTCACCATGGACACATACCCAACCCA +
Preference number: 3 (lower is better)
Translates to: LFEKSQSSISVY*SILHHGHIPNP
Trigger: TGGGTTGGGTATGTGTCCATGGTGAAGTATGCTGCAGTAGACAGAAATACTGCTTTGAGACTTCTCAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR TCA 72 bp AATTTGGCTTACACTTCCATATCACATTCCAATCACTaGGTAAAGACAGAGTGTGAACTCCAGGAGGAGCAG +
Preference number: 3 (lower is better)
Translates to: NLAYTSISHSNH*VKTECELQEEQ
Trigger: CTGCTCCTCCTGGAGTTCACACTCTGTCTTTACTCAGTGATTGGAATGTGATATGGAAGTGTAAGCCAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CCA 72 bp AGGAGGGACTGTGGGCATTATATAGACTCACTGATATaGAGCTTGATAACCCAGAAGAGACTTCACATCAAA +
Preference number: 3 (lower is better)
Translates to: RRDCGHYIDSLI*SLITQKRLHIK
Trigger: TTTGATGTGAAGTCTCTTCTGGGTTATCAAGCTCCATATCAGTGAGTCTATATAATGCCCACAGTCCCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CCA 72 bp AGTTTCCGCAAATGCTTGTCCAACTCTTTCAATTCTTaGTCCTCATCTCAGACTTTCTCTCTTAGAATATTT +
Preference number: 3 (lower is better)
Translates to: SFRKCLSNSFNS*SSSQTFSLRIF
Trigger: AAATATTCTAAGAGAGAAAGTCTGAGATGAGGACCAAGAATTGAAAGAGTTGGACAAGCATTTGCGGAAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS-3UTR TCA 90 bp GTGTCCATGGCATGCCCGGAGGCTCCTGGATCAGCGTGGCTGAGGGGACAGTTTCCAAGAAGAGGGAGATaGGAGACAGGGAGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: VSMACPEAPGSAWLRGQFPRRGR*ETGSSP
Trigger: TGGGCTACTCCCTGTCTCTCATCTCCCTCTTCTTGG...AAACTGTCCCCTCAGCCACGCTGATCCAGGAGCCTCCGGGCATGCCATGGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS-3UTR CCA 90 bp GAAGCCCTTCACAGTGAGCAGGGTTTCTGCAAGCAGCAGCAGTTCCCTGGGCTGCCACCACCAGGTACTTaGGCCACAGCCGCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: EALHSEQGFCKQQQFPGLPPPGT*ATAAFQ
Trigger: CTGAAAGGCGGCTGTGGCCCAAGTACCTGGTGGTGG...CAGCCCAGGGAACTGCTGCTGCTTGCAGAAACCCTGCTCACTGTGAAGGGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS-3UTR TCA 90 bp GTGTCCATGGCATGCCCGGAGGCTCCTGGATCAGCGTGGCTGAGGGGACAGTTTGCGCTCTTGGCCTTGTaGCATGATGAGATCTGCTTT +
Preference number: 4 (lower is better)
Translates to: VSMACPEAPGSAWLRGQFALLAL*HDEICF
Trigger: AAAGCAGATCTCATCATGTCACAAGGCCAAGAGCGC...AAACTGTCCCCTCAGCCACGCTGATCCAGGAGCCTCCGGGCATGCCATGGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS-3UTR TCA 90 bp GGCTGCCTCCCCACCAGACCACAGCTTTTGATTCCAAGGAATACCTCCTCCCAGCGGTCAGGTGTGAGCTaGCACCTGAAGATTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GCLPTRPQLLIPRNTSSQRSGVS*HLKIAA
Trigger: AGCTGCAATCTTCAGGTGTCAGCTCACACCTGACCG...CTGGGAGGAGGTATTCCTTGGAATCAAAAGCTGTGGTCTGGTGGGGAGGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS-3UTR GCA 90 bp CTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCTTCCCTGCCCTGGTGCGGTCTTTCTCAGCTCTaGCTTCACCTCTCTACTGGC +
Preference number: 4 (lower is better)
Translates to: LCRHSGASSSAHSSLPWCGLSQL*LHLSTG
Trigger: GCCAGTAGAGAGGTGAAGGCAGAGCTGAGAAAGACC...GCACCAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS-3UTR GCA 90 bp CTCCCTCCATCCTGCCTGGGTTTTACCAAGGGTGAGGAGTTTCCGCAAATGCTTCTAGGACACAGGCTCTaGAGCCCCAGTGGCGAGCTA +
Preference number: 4 (lower is better)
Translates to: LPPSCLGFTKGEEFPQMLLGHRL*SPSGEL
Trigger: TAGCTCGCCACTGGGGCTGCAGAGCCTGTGTCCTAG...AAGCATTTGCGGAAACTCCTCACCCTTGGTAAAACCCAGGCAGGATGGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS-3UTR CCA 90 bp CATTCTGGGGCTTCATCTTCTGCACACTCTTCCCTGCCCTGGTGCCAACATCCTGCTCTGCAGCCCCAGTaGCGAGCTAATAAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: HSGASSSAHSSLPWCQHPALQPQ*RANKKR
Trigger: CCGCTTCTTATTAGCTCGCCACTGGGGCTGCAGAGC...AGGATGTTGGCACCAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCCAGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS-3UTR TCA 90 bp GTGTCCATGGCATGCCCGGAGGCTCCTGGATCAGCGTGGCTGAGGGGACAGTTTGTGAAGAGGAACTCATaGACCCCCATCAAAAGAATG +
Preference number: 4 (lower is better)
Translates to: VSMACPEAPGSAWLRGQFVKRNS*TPIKRM
Trigger: CATTCTTTTGATGGGGGTTCATGAGTTCCTCTTCAC...AAACTGTCCCCTCAGCCACGCTGATCCAGGAGCCTCCGGGCATGCCATGGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS-3UTR GCA 90 bp CTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCTTCCCTGCCCTGGTGCCTGACACCTGAAGATTaGAGCTTCTGGAGTGTCTCG +
Preference number: 4 (lower is better)
Translates to: LCRHSGASSSAHSSLPWCLTPED*SFWSVS
Trigger: CGAGACACTCCAGAAGCTGCAATCTTCAGGTGTCAG...GCACCAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS-3UTR TCA 90 bp AAGAGGAGGACCCTGGGCTCAGCAACCTCTTTCCTAGGGATCCTCAGTTGCCAACCAGAGCTCTCAGGATaGACGAAGCGAACAGGTTCA +
Preference number: 4 (lower is better)
Translates to: KRRTLGSATSFLGILSCQPELSG*TKRTGS
Trigger: TGAACCTGTTCGCTTCGTTCATCCTGAGAGCTCTGG...TTGGCAACTGAGGATCCCTAGGAAAGAGGTTGCTGAGCCCAGGGTCCTCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS-3UTR GCA 90 bp AAGAGGAGGACCCTGGGCTCAGCAACCTCTTTCCTAGGGATCCTCAGTTGCCAACTGGCAAAGCCGTACTaGAAGGCCACCAGAAATCCA +
Preference number: 4 (lower is better)
Translates to: KRRTLGSATSFLGILSCQLAKPY*KATRNP
Trigger: TGGATTTCTGGTGGCCTTGCAGTACGGCTTTGCCAG...TTGGCAACTGAGGATCCCTAGGAAAGAGGTTGCTGAGCCCAGGGTCCTCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS-3UTR GCA 90 bp AGAGTCATTGGAGCACACTGCTCTTGCTGGTCTGCCTTTGAGCCAATGAGTCACAGCAGAGGCTCAGGATaGAGATGGTGTGTGCGCCTC +
Preference number: 4 (lower is better)
Translates to: RVIGAHCSCWSAFEPMSHSRGSG*RWCVRL
Trigger: GAGGCGCACACACCATCTGCATCCTGAGCCTCTGCT...GTGACTCATTGGCTCAAAGGCAGACCAGCAAGAGCAGTGTGCTCCAATGACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS-3UTR CCA 90 bp TCTTGGGCTTTTGTTTCTTCCCAGGCGGACAAGAAGGACCCACAAGGCAATGGCGCTGAGGGAAGTGGGTaGGATGTGGAGATGGTACAG +
Preference number: 4 (lower is better)
Translates to: SWAFVSSQADKKDPQGNGAEGSG*DVEMVQ
Trigger: CTGTACCATCTCCACATCCCACCCACTTCCCTCAGC...GCCATTGCCTTGTGGGTCCTTCTTGTCCGCCTGGGAAGAAACAAAAGCCCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS-3UTR CCA 90 bp AAGAGGAGGACCCTGGGCTCAGCAACCTCTTTCCTAGGGATCCTCAGTTGCCAACCTCCGACAGCTTCTTaGAACATTTCCCCAGGAACC +
Preference number: 4 (lower is better)
Translates to: KRRTLGSATSFLGILSCQPPTAS*NISPGT
Trigger: GGTTCCTGGGGAAATGTTCCAAGAAGCTGTCGGAGG...TTGGCAACTGAGGATCCCTAGGAAAGAGGTTGCTGAGCCCAGGGTCCTCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CAA 72 bp AAAGGATCCGAGAGATACTGCCCGCCCGCTGATGTCTaGGGCTTTTGTTTCTTCCCAGGCGGACAAGAAGGA +
Preference number: 4 (lower is better)
Translates to: KGSERYCPPADV*GFCFFPGGQEG
Trigger: TCCTTCTTGTCCGCCTGGGAAGAAACAAAAGCCCAAGACATCAGCGGGCGGGCAGTATCTCTCGGATCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS-3UTR TCA 90 bp AGTAGCTGCTCCCTCCATCCTGCCTGGGTTTTACCAAGGGTGAGGAGTTTCCGCGATCCACGTTTTGTTTaGAGCTGTGGTTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: SSCSLHPAWVLPRVRSFRDPRFV*SCGSLS
Trigger: GCTCAGAGAACCACAGCTTCAAACAAAACGTGGATC...GCGGAAACTCCTCACCCTTGGTAAAACCCAGGCAGGATGGAGGGAGCAGCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS-3UTR CCA 90 bp CGCAGAGTCATTGGAGCACACTGCTCTTGCTGGTCTGCCTTTGAGCCAATGAGTGAAGTGGGTGGGATGTaGAGATGGTACAGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: RRVIGAHCSCWSAFEPMSEVGGM*RWYRLV
Trigger: AACCAGCCTGTACCATCTCCACATCCCACCCACTTC...ACTCATTGGCTCAAAGGCAGACCAGCAAGAGCAGTGTGCTCCAATGACTCTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS-3UTR GCA 90 bp TTCACTGTGCTCAGAACAGGGAAGAGGGTTCATGAAGCCCTTCACAGTGAGCAGCTGGCAAAGCCGTACTaGAAGGCCACCAGAAATCCA +
Preference number: 4 (lower is better)
Translates to: FTVLRTGKRVHEALHSEQLAKPY*KATRNP
Trigger: TGGATTTCTGGTGGCCTTGCAGTACGGCTTTGCCAG...CTGCTCACTGTGAAGGGCTTCATGAACCCTCTTCCCTGTTCTGAGCACAGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS-3UTR CCA 90 bp GCCACCTTCAGCAAGTCCACACTCAGACAGGGCTTCCCTCACCTTATTCCCTCACACTGTCAGGCCTCCTaGAGTAAGAGTTGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: ATFSKSTLRQGFPHLIPSHCQAS*SKSCRR
Trigger: TCTTCTACAACTCTTACTCCAGGAGGCCTGACAGTG...TGAGGGAATAAGGTGAGGGAAGCCCTGTCTGAGTGTGGACTTGCTGAAGGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS-3UTR TCA 90 bp CGCAGAGTCATTGGAGCACACTGCTCTTGCTGGTCTGCCTTTGAGCCAATGAGTGATCCACGTTTTGTTTaGAGCTGTGGTTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: RRVIGAHCSCWSAFEPMSDPRFV*SCGSLS
Trigger: GCTCAGAGAACCACAGCTTCAAACAAAACGTGGATC...ACTCATTGGCTCAAAGGCAGACCAGCAAGAGCAGTGTGCTCCAATGACTCTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS-3UTR TCA 90 bp ATAGAGCCTGGGGCTTCTTATGCCACCTTCAGCAAGTCCACACTCAGACAGGGCTTTCCAGGAAAAGAATaGGGCCAGCACACGTACTTA +
Preference number: 4 (lower is better)
Translates to: IEPGASYATFSKSTLRQGFPGKE*GQHTYL
Trigger: TAAGTACGTGTGCTGGCCTCATTCTTTTCCTGGAAA...GCCCTGTCTGAGTGTGGACTTGCTGAAGGTGGCATAAGAAGCCCCAGGCTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS-3UTR GCA 90 bp AGTAGCTGCTCCCTCCATCCTGCCTGGGTTTTACCAAGGGTGAGGAGTTTCCGCCTTATTCTCATTTACTaGCCAGCACCCTGTATTCTC +
Preference number: 4 (lower is better)
Translates to: SSCSLHPAWVLPRVRSFRLILIY*PAPCIL
Trigger: GAGAATACAGGGTGCTGGGCAGTAAATGAGAATAAG...GCGGAAACTCCTCACCCTTGGTAAAACCCAGGCAGGATGGAGGGAGCAGCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS-3UTR CCA 90 bp CTGATCTGGAAAGGATCCGAGAGATACTGCCCGCCCGCTGATGTCTTGGGCTTTACATCAGCTGCAAGGTaGACAACAAGGTATGGTGAT +
Preference number: 4 (lower is better)
Translates to: LIWKGSERYCPPADVLGFTSAAR*TTRYGD
Trigger: ATCACCATACCTTGTTGTCCACCTTGCAGCTGATGT...AAAGCCCAAGACATCAGCGGGCGGGCAGTATCTCTCGGATCCTTTCCAGATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS-3UTR CCA 90 bp CTGCAGCATACTTCACCATGGACACATACCCAACCCAGACAGCATACCCCACCAGCAACCACAAGTGATTaGTGCCCACAAAGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: LQHTSPWTHTQPRQHTPPATTSD*CPQSSA
Trigger: TGCACTACTTTGTGGGCACCAATCACTTGTGGTTGC...TGGTGGGGTATGCTGTCTGGGTTGGGTATGTGTCCATGGTGAAGTATGCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CAA 72 bp CCTCTTCATAGAAACATCCTCTCACTCGCAGAGTCATaGGAGCACACTGCTCTTGCTGGTCTGCCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: PLHRNILSLAES*EHTALAGLPLS
Trigger: GCTCAAAGGCAGACCAGCAAGAGCAGTGTGCTCCAATGACTCTGCGAGTGAGAGGATGTTTCTATGAAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS-3UTR TCA 90 bp GATACTTTAAAGCTTCCTGTGGGGTTCCAGTGCACCCTACTTCCATCTCTAGAACCAAGAAGAGGGAGATaGGAGACAGGGAGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: DTLKLPVGFQCTLLPSLEPRRGR*ETGSSP
Trigger: TGGGCTACTCCCTGTCTCTCATCTCCCTCTTCTTGG...TTCTAGAGATGGAAGTAGGGTGCACTGGAACCCCACAGGAAGCTTTAAAGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS-3UTR TCA 90 bp GGGCTTTTGTTTCTTCCCAGGCGGACAAGAAGGACCCACAAGGCAATGGCACGGTATATTTGTAGTCTCTaGAGCACATCTGATGAGCTC +
Preference number: 4 (lower is better)
Translates to: GLLFLPRRTRRTHKAMARYICSL*STSDEL
Trigger: GAGCTCATCAGATGTGCTTCAGAGACTACAAATATA...CCGTGCCATTGCCTTGTGGGTCCTTCTTGTCCGCCTGGGAAGAAACAAAAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS-3UTR GCA 90 bp CTGATCTGGAAAGGATCCGAGAGATACTGCCCGCCCGCTGATGTCTTGGGCTTTCTTATTCTCATTTACTaGCCAGCACCCTGTATTCTC +
Preference number: 4 (lower is better)
Translates to: LIWKGSERYCPPADVLGFLILIY*PAPCIL
Trigger: GAGAATACAGGGTGCTGGGCAGTAAATGAGAATAAG...AAAGCCCAAGACATCAGCGGGCGGGCAGTATCTCTCGGATCCTTTCCAGATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS-3UTR GCA 90 bp CTGAGCCTGGCCTTGACTGGTTGTCCCTCTTCAGCCTCTGTAGGTCAGGTCAAAGATCCTGTAGTAACTTaGTTGATGGAAACCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LSLALTGCPSSASVGQVKDPVVT*LMETSR
Trigger: TCTGCTGGTTTCCATCAAGCAAGTTACTACAGGATC...TTTGACCTGACCTACAGAGGCTGAAGAGGGACAACCAGTCAAGGCCAGGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS-3UTR CCA 90 bp TGTCTTGGGCTTTTGTTTCTTCCCAGGCGGACAAGAAGGACCCACAAGGCAATGGCAACCACAAGTGATTaGTGCCCACAAAGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: CLGLLFLPRRTRRTHKAMATTSD*CPQSSA
Trigger: TGCACTACTTTGTGGGCACCAATCACTTGTGGTTGC...CATTGCCTTGTGGGTCCTTCTTGTCCGCCTGGGAAGAAACAAAAGCCCAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS-3UTR CCA 90 bp ACCCACAGTGGGATGGACTCTTCCACATCAGCCATGAATCAAGAAAATGCTCCCTCTGTAGGCCCTTCCTaGGCTCTCTTTATTCCACCA +
Preference number: 4 (lower is better)
Translates to: THSGMDSSTSAMNQENAPSVGPS*ALFIPP
Trigger: TGGTGGAATAAAGAGAGCCCAGGAAGGGCCTACAGA...GGGAGCATTTTCTTGATTCATGGCTGATGTGGAAGAGTCCATCCCACTGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS-3UTR CCA 90 bp CATTCTGGGGCTTCATCTTCTGCACACTCTTCCCTGCCCTGGTGCCAACATCCTTTTTGTTTGAAGCTGTaGTTCTCTGAGCATTCTGAC +
Preference number: 4 (lower is better)
Translates to: HSGASSSAHSSLPWCQHPFCLKL*FSEHSD
Trigger: GTCAGAATGCTCAGAGAACCACAGCTTCAAACAAAA...AGGATGTTGGCACCAGGGCAGGGAAGAGTGTGCAGAAGATGAAGCCCCAGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CAA 72 bp ACTGACCACCATCAGTGGCTCACCTTAGTCCTGGCCTaGCTTTCAAGTCTCCTTATAAAGAAAACAGCCAGG +
Preference number: 4 (lower is better)
Translates to: TDHHQWLTLVLA*LSSLLIKKTAR
Trigger: CCTGGCTGTTTTCTTTATAAGGAGACTTGAAAGCAAGGCCAGGACTAAGGTGAGCCACTGATGGTGGTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS-3UTR TCA 90 bp TCTTGGGCTTTTGTTTCTTCCCAGGCGGACAAGAAGGACCCACAAGGCAATGGCGAGACGAATAAGTCTTaGAAATCCTTGAACTTGGTC +
Preference number: 4 (lower is better)
Translates to: SWAFVSSQADKKDPQGNGETNKS*KSLNLV
Trigger: GACCAAGTTCAAGGATTTTCAAGACTTATTCGTCTC...GCCATTGCCTTGTGGGTCCTTCTTGTCCGCCTGGGAAGAAACAAAAGCCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS-3UTR TCA 90 bp AGGGCATGGTTGAAATCTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCGAGACGAATAAGTCTTaGAAATCCTTGAACTTGGTC +
Preference number: 4 (lower is better)
Translates to: RAWLKSMPAFWGFIFCTLETNKS*KSLNLV
Trigger: GACCAAGTTCAAGGATTTTCAAGACTTATTCGTCTC...GAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAGATTTCAACCATGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CAA 72 bp CCTAGGAGACACGCCTTTCATTGTGCCTTAGGACATTaGCAGAGAGGCTTACCTAAGCAACAGCATCTATCT +
Preference number: 4 (lower is better)
Translates to: PRRHAFHCALGH*QRGLPKQQHLS
Trigger: AGATAGATGCTGTTGCTTAGGTAAGCCTCTCTGCAAATGTCCTAAGGCACAATGAAAGGCGTGTCTCCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CAA 72 bp AGGAACACATTATCAGCATTGCAGACAAGGGCATGGTaGAAATCTATGCCGGCATTCTGGGGCTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: RNTLSALQTRAW*KSMPAFWGFIF
Trigger: GAAGATGAAGCCCCAGAATGCCGGCATAGATTTCAACCATGCCCTTGTCTGCAATGCTGATAATGTGTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS-3UTR TCA 90 bp TCACTCCTTGCCAACTGCACAATGTTTCCACAAACAGTTCCTCCCTCAGTCACCAATGAGGAGCAGGGTTaGTTTTGCCAGTCTATATTT +
Preference number: 4 (lower is better)
Translates to: SLLANCTMFPQTVPPSVTNEEQG*FCQSIF
Trigger: AAATATAGACTGGCAAAATCAACCCTGCTCCTCATT...GGTGACTGAGGGAGGAACTGTTTGTGGAAACATTGTGCAGTTGGCAAGGAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS-3UTR TCA 90 bp ACCATGGACACATATCTCAACCAGGCAGTATACCCAACCATGGACACATATCTCGTGAAGAGGAACTCATaGACCCCCATCAAAAGAATG +
Preference number: 4 (lower is better)
Translates to: TMDTYLNQAVYPTMDTYLVKRNS*TPIKRM
Trigger: CATTCTTTTGATGGGGGTTCATGAGTTCCTCTTCAC...GAGATATGTGTCCATGGTTGGGTATACTGCCTGGTTGAGATATGTGTCCATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS-3UTR GCA 90 bp ACCATGGACACATATCTCAACCAGGCAGTATACCCAACCATGGACACATATCTCCATTCTGACTCATCCTaGCAAGTATCTGTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: TMDTYLNQAVYPTMDTYLHSDSS*QVSVEF
Trigger: GAACTCCACAGATACTTGGCAGGATGAGTCAGAATG...GAGATATGTGTCCATGGTTGGGTATACTGCCTGGTTGAGATATGTGTCCATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CAA 72 bp TGGGTTTTACCAAGGGTGAGGAGTTTCCGCAAATGCTaGTCCAACTCTTTCAATTCTTGGTCCTCATCTCAG +
Preference number: 4 (lower is better)
Translates to: WVLPRVRSFRKC*SNSFNSWSSSQ
Trigger: CTGAGATGAGGACCAAGAATTGAAAGAGTTGGACAAGCATTTGCGGAAACTCCTCACCCTTGGTAAAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS-3UTR TCA 90 bp GGCCTTTTCCTCTTCATAGAAACATCCTCTCACTCGCAGAGTCATTGGAGCACAAATGAGGAGCAGGGTTaGTTTTGCCAGTCTATATTT +
Preference number: 4 (lower is better)
Translates to: GLFLFIETSSHSQSHWSTNEEQG*FCQSIF
Trigger: AAATATAGACTGGCAAAATCAACCCTGCTCCTCATT...TGTGCTCCAATGACTCTGCGAGTGAGAGGATGTTTCTATGAAGAGGAAAAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS-3UTR CCA 90 bp TCACGACTGAAAAACAAGTTGGGGAGGAAAGGGTTAATTTGGCTTACACTTCCAACATCAGCTGCAAGGTaGACAACAAGGTATGGTGAT +
Preference number: 4 (lower is better)
Translates to: SRLKNKLGRKGLIWLTLPTSAAR*TTRYGD
Trigger: ATCACCATACCTTGTTGTCCACCTTGCAGCTGATGT...TGGAAGTGTAAGCCAAATTAACCCTTTCCTCCCCAACTTGTTTTTCAGTCGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CAA 72 bp AGAGGCAAGAACTATGGAGGAATGCTTTTTACTGGCTaGTTCATCATGGCTCACTCTATCTGCTTTCTTACA +
Preference number: 4 (lower is better)
Translates to: RGKNYGGMLFTG*FIMAHSICFLT
Trigger: TGTAAGAAAGCAGATAGAGTGAGCCATGATGAACAAGCCAGTAAAAAGCATTCCTCCATAGTTCTTGCCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CAA 72 bp CATATAATGGAATGTCTTAAGTTTCCTTTGCTGAGCTaGGCAGCTCTGTTTGAGAAGTCTCAAAGCAGTATT +
Preference number: 4 (lower is better)
Translates to: HIMECLKFPLLS*AALFEKSQSSI
Trigger: AATACTGCTTTGAGACTTCTCAAACAGAGCTGCCAAGCTCAGCAAAGGAAACTTAAGACATTCCATTATATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
3UTR CAA 72 bp CTAAGTTCACATATAATGGAATGTCTTAAGTTTCCTTaGCTGAGCTTGGCAGCTCTGTTTGAGAAGTCTCAA +
Preference number: 4 (lower is better)
Translates to: LSSHIMECLKFP*LSLAALFEKSQ
Trigger: TTGAGACTTCTCAAACAGAGCTGCCAAGCTCAGCAAAGGAAACTTAAGACATTCCATTATATGTGAACTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS GCA 90 bp GGGATGTGGAGATGGTACAGGCTGGTTCACAGCAGAGGCTCAGGATaGAGATGGTGTGTGCGCCTCCCTCTCCTGGCATGCGCTCTTGGC +
Preference number: 5 (lower is better)
Translates to: GMWRWYRLVHSRGSG*RWCVRLPLLACALG
Trigger: GCCAAGAGCGCATGCCAGGAGAGGGAGGCGCACACACCATCTGCATCCTGAGCCTCTGCTGTGAACCAGCCTGTACCATCTCCACATCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS TCA 90 bp GCTGTGCCCCATGATCCCGCAGGTTCCCAGCGGTCAGGTGTGAGCTaGCACCTGAAGATTGCAGCTTCTGGAGTGTCTCGGCACCATCTC +
Preference number: 5 (lower is better)
Translates to: AVPHDPAGSQRSGVS*HLKIAASGVSRHHL
Trigger: GAGATGGTGCCGAGACACTCCAGAAGCTGCAATCTTCAGGTGTCAGCTCACACCTGACCGCTGGGAACCTGCGGGATCATGGGGCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS GCA 90 bp TCCCGCAGGTTCCCAGCGGTCAGGTGTGAGCTGACACCTGAAGATTaGAGCTTCTGGAGTGTCTCGGCACCATCTCCCTCCGACAGCTTC +
Preference number: 5 (lower is better)
Translates to: SRRFPAVRCELTPED*SFWSVSAPSPSDSF
Trigger: GAAGCTGTCGGAGGGAGATGGTGCCGAGACACTCCAGAAGCTGCAATCTTCAGGTGTCAGCTCACACCTGACCGCTGGGAACCTGCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS TCA 90 bp AGATCTCACTCTCTTCCAGAATCTCCTCCATGGTATTGGCCAGGGTaGAGTCTCCCTCGCTGCTCTCAGACAGGCTGCTTGCCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: RSHSLPESPPWYWPG*SLPRCSQTGCLPGA
Trigger: GGCCCCGGGCAAGCAGCCTGTCTGAGAGCAGCGAGGGAGACTTCACCCTGGCCAATACCATGGAGGAGATTCTGGAAGAGAGTGAGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS-3UTR CAA 90 bp CCACTGGGAAGCCTCTGTAGGGTGTGCGTGATGGCGGTCTCCCTGTCGGGAGAGTGCTTTCTGGAGATCTaGGCCACAGTAGGAAGGTGT +
Preference number: 5 (lower is better)
Translates to: PLGSLCRVCVMAVSLSGECFLEI*ATVGRC
Trigger: ACACCTTCCTACTGTGGCCAAGATCTCCAGAAAGCA...CTCTCCCGACAGGGAGACCGCCATCACGCACACCCTACAGAGGCTTCCCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS GCA 90 bp GGGCTAGAGGCAAAGGTGGGCACCTCTCTACTGGCAAAGCCGTACTaGAAGGCCACCAGAAATCCATGGAAGGAGCTCAGGGTCAACTGG +
Preference number: 5 (lower is better)
Translates to: GLEAKVGTSLLAKPY*KATRNPWKELRVNW
Trigger: CCAGTTGACCCTGAGCTCCTTCCATGGATTTCTGGTGGCCTTGCAGTACGGCTTTGCCAGTAGAGAGGTGCCCACCTTTGCCTCTAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS-3UTR CAA 90 bp AGGGCATGGTTGAAATCTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCTCTCAGACAGGCTGCTaGCCCGGGGCCAAGCTCCAC +
Preference number: 5 (lower is better)
Translates to: RAWLKSMPAFWGFIFCTLSQTGC*PGAKLH
Trigger: GTGGAGCTTGGCCCCGGGCAAGCAGCCTGTCTGAGA...GAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAGATTTCAACCATGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS CCA 90 bp GCAGCTTCTGGAGTGTCTCGGCACCATCTCCCTCCGACAGCTTCTTaGAACATTTCCCCAGGAACCGGAAGTTCTTCCCTAGGACACAGG +
Preference number: 5 (lower is better)
Translates to: AASGVSRHHLPPTAS*NISPGTGSSSLGHR
Trigger: CCTGTGTCCTAGGGAAGAACTTCCGGTTCCTGGGGAAATGTTCCAAGAAGCTGTCGGAGGGAGATGGTGCCGAGACACTCCAGAAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS-3UTR CAA 90 bp AGAGTCATTGGAGCACACTGCTCTTGCTGGTCTGCCTTTGAGCCAATGAGTCACCCCACCACCAGGTACTaGGGCCACAGCCGCCTTTCA +
Preference number: 5 (lower is better)
Translates to: RVIGAHCSCWSAFEPMSHPTTRY*GHSRLS
Trigger: TGAAAGGCGGCTGTGGCCCAAGTACCTGGTGGTGGG...GTGACTCATTGGCTCAAAGGCAGACCAGCAAGAGCAGTGTGCTCCAATGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS TCA 90 bp GATGGTGTGTGCGCCTCCCTCTCCTGGCATGCGCTCTTGGCCTTGTaGCATGATGAGATCTGCTTTCTGGAGATCTTGGCCACAGTAGGA +
Preference number: 5 (lower is better)
Translates to: DGVCASLSWHALLAL*HDEICFLEILATVG
Trigger: TCCTACTGTGGCCAAGATCTCCAGAAAGCAGATCTCATCATGTCACAAGGCCAAGAGCGCATGCCAGGAGAGGGAGGCGCACACACCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS GCA 90 bp GAGCATGGAGGTAAAGTCCTTCAACCAGCAACCACAAGTGATTGGTaGCCACAAAGTAGTGCAGGAGGACCTGGACAGAGCGGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: EHGGKVLQPATTSDW*PQSSAGGPGQSGRR
Trigger: CCTCCTGCCGCTCTGTCCAGGTCCTCCTGCACTACTTTGTGGGCACCAATCACTTGTGGTTGCTGGTTGAAGGACTTTACCTCCATGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021289.10
ENSMUST00000051765.9
CDS CCA 90 bp AGGATGCAGATGGTGTGTGCGCCTCCCTCTCCTGGCATGCGCTCTTaGCCTTGTGACATGATGAGATCTGCTTTCTGGAGATCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: RMQMVCAPPSPGMRS*PCDMMRSAFWRSWP
Trigger: TGGCCAAGATCTCCAGAAAGCAGATCTCATCATGTCACAAGGCCAAGAGCGCATGCCAGGAGAGGGAGGCGCACACACCATCTGCATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS-3UTR CAA 90 bp GCCACCTTCAGCAAGTCCACACTCAGACAGGGCTTCCCTCACCTTATTCCCTCACCCTCCGACAGCTTCTaGGAACATTTCCCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: ATFSKSTLRQGFPHLIPSPSDSF*EHFPRN
Trigger: GTTCCTGGGGAAATGTTCCAAGAAGCTGTCGGAGGG...TGAGGGAATAAGGTGAGGGAAGCCCTGTCTGAGTGTGGACTTGCTGAAGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS-3UTR CAA 90 bp TGGAAAGGATCCGAGAGATACTGCCCGCCCGCTGATGTCTTGGGCTTTTGTTTCTTTCAGGAAGCACTGTaGGCTCCAGCAGAGCATGGA +
Preference number: 5 (lower is better)
Translates to: WKGSERYCPPADVLGFCFFQEAL*APAEHG
Trigger: TCCATGCTCTGCTGGAGCCAACAGTGCTTCCTGAAA...GAAACAAAAGCCCAAGACATCAGCGGGCGGGCAGTATCTCTCGGATCCTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS CCA 90 bp AGCTGTGGTTCTCTGAGCATTCTGACTCATCCTGCCAAGTATCTGTaGAGTTCTCTTGCTTCTGCCAAGTCCCCTGAGCCAAGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: SCGSLSILTHPAKYL*SSLASAKSPEPSSV
Trigger: GACACTGCTTGGCTCAGGGGACTTGGCAGAAGCAAGAGAACTCCACAGATACTTGGCAGGATGAGTCAGAATGCTCAGAGAACCACAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS-3UTR CAA 90 bp AGGGCATGGTTGAAATCTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCTTTCAGGAAGCACTGTaGGCTCCAGCAGAGCATGGA +
Preference number: 5 (lower is better)
Translates to: RAWLKSMPAFWGFIFCTLFQEAL*APAEHG
Trigger: TCCATGCTCTGCTGGAGCCAACAGTGCTTCCTGAAA...GAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAGATTTCAACCATGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS-3UTR CAA 90 bp CTCCCTCCATCCTGCCTGGGTTTTACCAAGGGTGAGGAGTTTCCGCAAATGCTTCCTGTAGTAACTTGCTaGATGGAAACCAGCAGAAGC +
Preference number: 5 (lower is better)
Translates to: LPPSCLGFTKGEEFPQMLPVVTC*METSRS
Trigger: GCTTCTGCTGGTTTCCATCAAGCAAGTTACTACAGG...AAGCATTTGCGGAAACTCCTCACCCTTGGTAAAACCCAGGCAGGATGGAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS-3UTR CAA 90 bp AAGAGGAGGACCCTGGGCTCAGCAACCTCTTTCCTAGGGATCCTCAGTTGCCAAGGAGCAGGGTTGATTTaGCCAGTCTATATTTGTAGT +
Preference number: 5 (lower is better)
Translates to: KRRTLGSATSFLGILSCQGAGLI*PVYICS
Trigger: ACTACAAATATAGACTGGCAAAATCAACCCTGCTCC...TTGGCAACTGAGGATCCCTAGGAAAGAGGTTGCTGAGCCCAGGGTCCTCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS-3UTR CAA 90 bp ACCATGGACACATATCTCAACCAGGCAGTATACCCAACCATGGACACATATCTCATCTCCTCCATGGTATaGGCCAGGGTGAAGTCTCCC +
Preference number: 5 (lower is better)
Translates to: TMDTYLNQAVYPTMDTYLISSMV*ARVKSP
Trigger: GGGAGACTTCACCCTGGCCAATACCATGGAGGAGAT...GAGATATGTGTCCATGGTTGGGTATACTGCCTGGTTGAGATATGTGTCCATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS-3UTR CAA 90 bp ATCTGGAAAGGATCCGAGAGATACTGCCCGCCCGCTGATGTCTTGGGCTTTTGTGGAGCAGGGTTGATTTaGCCAGTCTATATTTGTAGT +
Preference number: 5 (lower is better)
Translates to: IWKGSERYCPPADVLGFCGAGLI*PVYICS
Trigger: ACTACAAATATAGACTGGCAAAATCAACCCTGCTCC...ACAAAAGCCCAAGACATCAGCGGGCGGGCAGTATCTCTCGGATCCTTTCCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS-3UTR CAA 90 bp AGGGCATGGTTGAAATCTATGCCGGCATTCTGGGGCTTCATCTTCTGCACACTCAGATCCTGTAGTAACTaGCTTGATGGAAACCAGCAG +
Preference number: 5 (lower is better)
Translates to: RAWLKSMPAFWGFIFCTLRSCSN*LDGNQQ
Trigger: CTGCTGGTTTCCATCAAGCAAGTTACTACAGGATCT...GAGTGTGCAGAAGATGAAGCCCCAGAATGCCGGCATAGATTTCAACCATGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS CCA 90 bp TCTCTGACAGATATGACATCCATCCACTCTCACTGTCAGGCCTCCTaGAGTAAGAGTTGTAGAAGACCATGTCCTTCACAAGGACAACCA +
Preference number: 5 (lower is better)
Translates to: SLTDMTSIHSHCQAS*SKSCRRPCPSQGQP
Trigger: TGGTTGTCCTTGTGAAGGACATGGTCTTCTACAACTCTTACTCCAGGAGGCCTGACAGTGAGAGTGGATGGATGTCATATCTGTCAGAGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS-3UTR CAA 90 bp TGTCTTGGGCTTTTGTTTCTTCCCAGGCGGACAAGAAGGACCCACAAGGCAATGATAGTGATCCACGTTTaGTTTGAAGCTGTGGTTCTC +
Preference number: 5 (lower is better)
Translates to: CLGLLFLPRRTRRTHKAMIVIHV*FEAVVL
Trigger: GAGAACCACAGCTTCAAACAAAACGTGGATCACTAT...CATTGCCTTGTGGGTCCTTCTTGTCCGCCTGGGAAGAAACAAAAGCCCAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS GCA 90 bp TTTCTTATTCTCATTTACTGCCCAGCACCCTGTATTCTCCAGGCTTaGTCGGACAAAAATCCAGGGAATAACAAACAGCATGGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: FLILIYCPAPCILQA*SDKNPGNNKQHGEG
Trigger: GCCTTCCCCATGCTGTTTGTTATTCCCTGGATTTTTGTCCGAGCAAGCCTGGAGAATACAGGGTGCTGGGCAGTAAATGAGAATAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021289.10
ENSMUST00000051765.9
CDS-3UTR CAA 90 bp CTCCCCACCAGACCACAGCTTTTGATTCCAAGGAATACCTCCTCCCAGAAGATTATAGTGATCCACGTTTaGTTTGAAGCTGTGGTTCTC +
Preference number: 5 (lower is better)
Translates to: LPTRPQLLIPRNTSSQKIIVIHV*FEAVVL
Trigger: GAGAACCACAGCTTCAAACAAAACGTGGATCACTAT...AATCTTCTGGGAGGAGGTATTCCTTGGAATCAAAAGCTGTGGTCTGGTGGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS-3UTR CAA 90 bp CCTGGTCTCCTTTCTTTTGCCATGATAAACATCACGACTGAAAAACAAGTTGGGATCTGTGGAGTTCTCTaGCTTCTGCCAAGTCCCCTG +
Preference number: 5 (lower is better)
Translates to: PGLLSFAMINITTEKQVGICGVL*LLPSPL
Trigger: CAGGGGACTTGGCAGAAGCAAGAGAACTCCACAGAT...CCCAACTTGTTTTTCAGTCGTGATGTTTATCATGGCAAAAGAAAGGAGACCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS TCA 90 bp GCAAGGTGGACAACAAGGTATGGTGATAGTGATCCACGTTTTGTTTaGAGCTGTGGTTCTCTGAGCATTCTGACTCATCCTGCCAAGTAT +
Preference number: 5 (lower is better)
Translates to: ARWTTRYGDSDPRFV*SCGSLSILTHPAKY
Trigger: ATACTTGGCAGGATGAGTCAGAATGCTCAGAGAACCACAGCTTCAAACAAAACGTGGATCACTATCACCATACCTTGTTGTCCACCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS TCA 90 bp ATGGAAGGAGCTCAGGGTCAACTGGATGAAGAGACGAATAAGTCTTaGAAATCCTTGAACTTGGTCGTCGGTGAAGAAAGTGAAGAGGAA +
Preference number: 5 (lower is better)
Translates to: MEGAQGQLDEETNKS*KSLNLVVGEESEEE
Trigger: TTCCTCTTCACTTTCTTCACCGACGACCAAGTTCAAGGATTTTCAAGACTTATTCGTCTCTTCATCCAGTTGACCCTGAGCTCCTTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021289.10
ENSMUST00000051765.9
CDS GCA 72 bp TGGTTCACAGCAGAGGCTCAGGATGCAGATGGTGTGTaGGCCTCCCTCTCCTGGCATGCGCTCTTGGCCTTG +
Preference number: 6 (lower is better)
Translates to: WFTAEAQDADGV*ASLSWHALLAL
Trigger: CAAGGCCAAGAGCGCATGCCAGGAGAGGGAGGCGCACACACCATCTGCATCCTGAGCCTCTGCTGTGAACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS CCA 72 bp ACAGCATGGGGAAGGCCCAACCCACCACCAGGTACTTaGGCCACAGCCGCCTTTCAGGAAGCACTGTTGGCT +
Preference number: 6 (lower is better)
Translates to: TAWGRPNPPPGT*ATAAFQEALLA
Trigger: AGCCAACAGTGCTTCCTGAAAGGCGGCTGTGGCCCAAGTACCTGGTGGTGGGTTGGGCCTTCCCCATGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021289.10
ENSMUST00000051765.9
CDS GCA 72 bp AGATGGTACAGGCTGGTTCACAGCAGAGGCTCAGGATaGAGATGGTGTGTGCGCCTCCCTCTCCTGGCATGC +
Preference number: 6 (lower is better)
Translates to: RWYRLVHSRGSG*RWCVRLPLLAC
Trigger: GCATGCCAGGAGAGGGAGGCGCACACACCATCTGCATCCTGAGCCTCTGCTGTGAACCAGCCTGTACCATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS CCA 72 bp TACAGGCTGGTTCACAGCAGAGGCTCAGGATGCAGATaGTGTGTGCGCCTCCCTCTCCTGGCATGCGCTCTT +
Preference number: 6 (lower is better)
Translates to: YRLVHSRGSGCR*CVRLPLLACAL
Trigger: AAGAGCGCATGCCAGGAGAGGGAGGCGCACACACCATCTGCATCCTGAGCCTCTGCTGTGAACCAGCCTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS CAA 90 bp GGAATAACAAACAGCATGGGGAAGGCCCAACCCACCACCAGGTACTaGGGCCACAGCCGCCTTTCAGGAAGCACTGTTGGCTCCAGCAGA +
Preference number: 6 (lower is better)
Translates to: GITNSMGKAQPTTRY*GHSRLSGSTVGSSR
Trigger: TCTGCTGGAGCCAACAGTGCTTCCTGAAAGGCGGCTGTGGCCCAAGTACCTGGTGGTGGGTTGGGCCTTCCCCATGCTGTTTGTTATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021289.10
ENSMUST00000051765.9
CDS GCA 72 bp TTCCCAGCGGTCAGGTGTGAGCTGACACCTGAAGATTaGAGCTTCTGGAGTGTCTCGGCACCATCTCCCTCC +
Preference number: 6 (lower is better)
Translates to: FPAVRCELTPED*SFWSVSAPSPS
Trigger: GGAGGGAGATGGTGCCGAGACACTCCAGAAGCTGCAATCTTCAGGTGTCAGCTCACACCTGACCGCTGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS TCA 72 bp TGCGCCTCCCTCTCCTGGCATGCGCTCTTGGCCTTGTaGCATGATGAGATCTGCTTTCTGGAGATCTTGGCC +
Preference number: 6 (lower is better)
Translates to: CASLSWHALLAL*HDEICFLEILA
Trigger: GGCCAAGATCTCCAGAAAGCAGATCTCATCATGTCACAAGGCCAAGAGCGCATGCCAGGAGAGGGAGGCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS GCA 72 bp GCAAAGGTGGGCACCTCTCTACTGGCAAAGCCGTACTaGAAGGCCACCAGAAATCCATGGAAGGAGCTCAGG +
Preference number: 6 (lower is better)
Translates to: AKVGTSLLAKPY*KATRNPWKELR
Trigger: CCTGAGCTCCTTCCATGGATTTCTGGTGGCCTTGCAGTACGGCTTTGCCAGTAGAGAGGTGCCCACCTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS CAA 90 bp TGCAGCTTCTGGAGTGTCTCGGCACCATCTCCCTCCGACAGCTTCTaGGAACATTTCCCCAGGAACCGGAAGTTCTTCCCTAGGACACAG +
Preference number: 6 (lower is better)
Translates to: CSFWSVSAPSPSDSF*EHFPRNRKFFPRTQ
Trigger: CTGTGTCCTAGGGAAGAACTTCCGGTTCCTGGGGAAATGTTCCAAGAAGCTGTCGGAGGGAGATGGTGCCGAGACACTCCAGAAGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS GCA 72 bp AGCTCTGCCTTCACCTCTCTACTGGCAAAGCCGTACTaGAAGGCCACCAGAAATCCATGGAAGGAGCTCAGG +
Preference number: 6 (lower is better)
Translates to: SSAFTSLLAKPY*KATRNPWKELR
Trigger: CCTGAGCTCCTTCCATGGATTTCTGGTGGCCTTGCAGTACGGCTTTGCCAGTAGAGAGGTGAAGGCAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS CCA 72 bp ATGGTGTGTGCGCCTCCCTCTCCTGGCATGCGCTCTTaGCCTTGTGACATGATGAGATCTGCTTTCTGGAGA +
Preference number: 6 (lower is better)
Translates to: MVCAPPSPGMRS*PCDMMRSAFWR
Trigger: TCTCCAGAAAGCAGATCTCATCATGTCACAAGGCCAAGAGCGCATGCCAGGAGAGGGAGGCGCACACACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021289.10
CDS CCA 72 bp GGAGTGTCTCGGCACCATCTCCCTCCGACAGCTTCTTaGAACATTTCCCCAGGAACCGGAAGTTCTTCCCTA +
Preference number: 6 (lower is better)
Translates to: GVSRHHLPPTAS*NISPGTGSSSL
Trigger: TAGGGAAGAACTTCCGGTTCCTGGGGAAATGTTCCAAGAAGCTGTCGGAGGGAGATGGTGCCGAGACACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS CAA 72 bp TGGAGTGTCTCGGCACCATCTCCCTCCGACAGCTTCTaGGAACATTTCCCCAGGAACCGGAAGTTCTTCCCT +
Preference number: 6 (lower is better)
Translates to: WSVSAPSPSDSF*EHFPRNRKFFP
Trigger: AGGGAAGAACTTCCGGTTCCTGGGGAAATGTTCCAAGAAGCTGTCGGAGGGAGATGGTGCCGAGACACTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS GCA 72 bp GGTAAAGTCCTTCAACCAGCAACCACAAGTGATTGGTaGCCACAAAGTAGTGCAGGAGGACCTGGACAGAGC +
Preference number: 6 (lower is better)
Translates to: GKVLQPATTSDW*PQSSAGGPGQS
Trigger: GCTCTGTCCAGGTCCTCCTGCACTACTTTGTGGGCACCAATCACTTGTGGTTGCTGGTTGAAGGACTTTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021289.10
ENSMUST00000051765.9
CDS CAA 72 bp ACTGTCTCCTCAAGGAGAGATCCTGTAGTAACTTGCTaGATGGAAACCAGCAGAAGCAGGGCGAGGAAGGGC +
Preference number: 6 (lower is better)
Translates to: TVSSRRDPVVTC*METSRSRARKG
Trigger: GCCCTTCCTCGCCCTGCTTCTGCTGGTTTCCATCAAGCAAGTTACTACAGGATCTCTCCTTGAGGAGACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS CCA 72 bp TCTCTGAGCATTCTGACTCATCCTGCCAAGTATCTGTaGAGTTCTCTTGCTTCTGCCAAGTCCCCTGAGCCA +
Preference number: 6 (lower is better)
Translates to: SLSILTHPAKYL*SSLASAKSPEP
Trigger: TGGCTCAGGGGACTTGGCAGAAGCAAGAGAACTCCACAGATACTTGGCAGGATGAGTCAGAATGCTCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9
CDS CCA 72 bp GATATGACATCCATCCACTCTCACTGTCAGGCCTCCTaGAGTAAGAGTTGTAGAAGACCATGTCCTTCACAA +
Preference number: 6 (lower is better)
Translates to: DMTSIHSHCQAS*SKSCRRPCPSQ
Trigger: TTGTGAAGGACATGGTCTTCTACAACTCTTACTCCAGGAGGCCTGACAGTGAGAGTGGATGGATGTCATATC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051765.9