Pregenerated sensors for GLP1R (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024027Ensembl transcript IDs: ENSMUST00000114574.3, ENSMUST00000236038.2
Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGCCAGACTCCCAGCCAGCCCCACCCTGGCTTGTGCAGGCCTGGTaGCCTTCATGGTGGAGGAGGGCTGAACCTAACTCCAGCATCTCC | + |
|
Preference number: 1 (lower is better) Translates to: LPDSQPAPPWLVQAW*PSWWRRAEPNSSIS Trigger: GGAGATGCTGGAGTTAGGTTCAGCCCTCCTCCACCATGAAGGTCACCAGGCCTGCACAAGCCAGGGTGGGGCTGGCTGGGAGTCTGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR GCA 90 bp | ATTAGCGATAATGGGAGCCCTGTCCGTGCATGGCGGGGATACATCTaGCAGACTCCCAGCCAGCCCCACCCTGGCTTGTGCAGGCCTGGT | + |
|
Preference number: 1 (lower is better) Translates to: ISDNGSPVRAWRGYI*QTPSQPHPGLCRPG Trigger: ACCAGGCCTGCACAAGCCAGGGTGGGGCTGGCTGGGAGTCTGGCAGATGTATCCCCGCCATGCACGGACAGGGCTCCCATTATCGCTAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR TCA 90 bp | ATGCACACAGCACAGCCGGCTCACCTTGCTGAGCTCTGGACTGGCTaGGGTTCCAAGGGCAGGTCTCTCATGGCCTCTTCTCGGAAGCCC | + |
|
Preference number: 1 (lower is better) Translates to: MHTAQPAHLAELWTG*GSKGRSLMASSRKP Trigger: GGGCTTCCGAGAAGAGGCCATGAGAGACCTGCCCTTGGAACCTCAGCCAGTCCAGAGCTCAGCAAGGTGAGCCGGCTGTGCTGTGTGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| 3UTR CCA 90 bp | TGTGTCCTTCACATTCCCTATCCCCAGGATCTCTCCCACCTGGGATaGCCACCCAGCCAGAAGCAAGGACCACAGGAGGACCGGCACTGG | + |
|
Preference number: 1 (lower is better) Translates to: CVLHIPYPQDLSHLG*PPSQKQGPQEDRHW Trigger: CCAGTGCCGGTCCTCCTGTGGTCCTTGCTTCTGGCTGGGTGGCCATCCCAGGTGGGAGAGATCCTGGGGATAGGGAATGTGAAGGACACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR TCA 90 bp | ATGCAAAGGACCCTGGGCCCACTTCCCCCACCCAACTCATTGTCTTaGTCAAGGAGGCAGTCGGGCTGCACTGCTTTCTCTAGCCTGAGG | + |
|
Preference number: 1 (lower is better) Translates to: MQRTLGPLPPPNSLS*SRRQSGCTAFSSLR Trigger: CCTCAGGCTAGAGAAAGCAGTGCAGCCCGACTGCCTCCTTGATCAAGACAATGAGTTGGGTGGGGGAAGTGGGCCCAGGGTCCTTTGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR TCA 90 bp | CAGCAATCCAGATGCACAGAGAAAGCCTCTTGTCGGGAGGAAGGCTaGTTGATGCAGGTGACAACCCCAGCCATGCACACAGCACAGCCG | + |
|
Preference number: 1 (lower is better) Translates to: QQSRCTEKASCREEG*LMQVTTPAMHTAQP Trigger: CGGCTGTGCTGTGTGCATGGCTGGGGTTGTCACCTGCATCAATCAGCCTTCCTCCCGACAAGAGGCTTTCTCTGTGCATCTGGATTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| 3UTR CCA 90 bp | TGGCCTCTAGGAAGCCACTGCCTACATCCCCAGGTAGGCAGTCTTTaGGTTTGGGTCTCTGCAGTGCTGTCTCCTTTAAGCCTTCTCACC | + |
|
Preference number: 1 (lower is better) Translates to: WPLGSHCLHPQVGSL*VWVSAVLSPLSLLT Trigger: GGTGAGAAGGCTTAAAGGAGACAGCACTGCAGAGACCCAAACCCAAAGACTGCCTACCTGGGGATGTAGGCAGTGGCTTCCTAGAGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR GCA 90 bp | AACAAGAAAGAGGTGCCCACCGGAAAACCTGCCCTTTCCTTAGGATaGAAAGGACCCTGGGCCCACTTCCCCCACCCAACTCATTGTCTT | + |
|
Preference number: 1 (lower is better) Translates to: NKKEVPTGKPALSLG*KGPWAHFPHPTHCL Trigger: AAGACAATGAGTTGGGTGGGGGAAGTGGGCCCAGGGTCCTTTGCATCCTAAGGAAAGGGCAGGTTTTCCGGTGGGCACCTCTTTCTTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR CCA 90 bp | CTAGGAAGCCACTGCCTACATCCCCAGGTAGGCAGTCTTTGGGTTTaGGTCTCTGCAGTGCTGTCTCCTTTAAGCCTTCTCACCATGGCT | + |
|
Preference number: 1 (lower is better) Translates to: LGSHCLHPQVGSLWV*VSAVLSPLSLLTMA Trigger: AGCCATGGTGAGAAGGCTTAAAGGAGACAGCACTGCAGAGACCCAAACCCAAAGACTGCCTACCTGGGGATGTAGGCAGTGGCTTCCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR CCA 90 bp | GGAGGCAAGTGCTTTTACCCACCGATCCATCTCACTGGTCCTGAATaGTGCTTCCAGATGTGGTCTTCCCCAGGACCAGAGAAACGGTTC | + |
|
Preference number: 1 (lower is better) Translates to: GGKCFYPPIHLTGPE*CFQMWSSPGPEKRF Trigger: GAACCGTTTCTCTGGTCCTGGGGAAGACCACATCTGGAAGCACCATTCAGGACCAGTGAGATGGATCGGTGGGTAAAAGCACTTGCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR CCA 90 bp | TACCATCCGGTGCTCTGTGAGACCTCCCCAGAATTCGGGGAGCACTaGAGATGGAAAGATGAGGTGCCTGGTCACCGTTTCATTTCTTTC | + |
|
Preference number: 1 (lower is better) Translates to: YHPVLCETSPEFGEH*RWKDEVPGHRFISF Trigger: GAAAGAAATGAAACGGTGACCAGGCACCTCATCTTTCCATCTCCAGTGCTCCCCGAATTCTGGGGAGGTCTCACAGAGCACCGGATGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR TCA 90 bp | AGGCCAAGAGCAAAGTGGCTTAAAGGGCCAGGCAAAGAACACCTCTaGGCATCATCTCCTCAACACCAGAGAGAGCTGCACGGTATGACT | + |
|
Preference number: 1 (lower is better) Translates to: RPRAKWLKGPGKEHL*ASSPQHQRELHGMT Trigger: AGTCATACCGTGCAGCTCTCTCTGGTGTTGAGGAGATGATGCTCAGAGGTGTTCTTTGCCTGGCCCTTTAAGCCACTTTGCTCTTGGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| 3UTR GCA 90 bp | CTCCTTGGAGGACATGTGTTTAGGTCCCAGGAGGCACTGCCCACTTaGCTGCTTCATAGGTTTAGAGAAAGAAAGCATGGTGTGTGTGTG | + |
|
Preference number: 1 (lower is better) Translates to: LLGGHVFRSQEALPT*LLHRFRERKHGVCV Trigger: CACACACACACCATGCTTTCTTTCTCTAAACCTATGAAGCAGGCAAGTGGGCAGTGCCTCCTGGGACCTAAACACATGTCCTCCAAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR GCA 90 bp | AGGCTGTTCTCCTTGGAGGACATGTGTTTAGGTCCCAGGAGGCACTaGCCACTTGCCTGCTTCATAGGTTTAGAGAAAGAAAGCATGGTG | + |
|
Preference number: 1 (lower is better) Translates to: RLFSLEDMCLGPRRH*PLACFIGLEKESMV Trigger: CACCATGCTTTCTTTCTCTAAACCTATGAAGCAGGCAAGTGGGCAGTGCCTCCTGGGACCTAAACACATGTCCTCCAAGGAGAACAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR GCA 90 bp | TGTCAGGATCTTTCCTGCCTGCCGAATGTCCCAGAACTCTATTCATaGGGTCTTCAGTATGAGGAGCGCTGGAGCACTTGTAATCATGTC | + |
|
Preference number: 1 (lower is better) Translates to: CQDLSCLPNVPELYS*GLQYEERWSTCNHV Trigger: GACATGATTACAAGTGCTCCAGCGCTCCTCATACTGAAGACCGCATGAATAGAGTTCTGGGACATTCGGCAGGCAGGAAAGATCCTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR CCA 90 bp | ATTGCCCTTGAGTGTGAGTCCGGGTTGATTTGCTGTTCTGTCCAATaGAACCCCAAGGGTCTTGCGGCTTTAAACAGGAAGAAGTCCTCT | + |
|
Preference number: 1 (lower is better) Translates to: IALECESGLICCSVQ*NPKGLAALNRKKSS Trigger: AGAGGACTTCTTCCTGTTTAAAGCCGCAAGACCCTTGGGGTTCCATTGGACAGAACAGCAAATCAACCCGGACTCACACTCAAGGGCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| 3UTR TCA 90 bp | ACCTCTGAGCATCATCTCCTCAACACCAGAGAGAGCTGCACGGTATaGCTTCAACAAATTCCCCTCCCCAAGGAAACAACAGGATATCAG | + |
|
Preference number: 1 (lower is better) Translates to: TSEHHLLNTRESCTV*LQQIPLPKETTGYQ Trigger: CTGATATCCTGTTGTTTCCTTGGGGAGGGGAATTTGTTGAAGTCATACCGTGCAGCTCTCTCTGGTGTTGAGGAGATGATGCTCAGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| 3UTR CCA 90 bp | TACCCTAATTCTCATCCAAGTCATAGACTCTGGTCACAGATGAGGTaGAGGTGTGGTGGCAATGGATCCCTTGGTTCTCTAGAGTCATTC | + |
|
Preference number: 1 (lower is better) Translates to: YPNSHPSHRLWSQMR*RCGGNGSLGSLESF Trigger: GAATGACTCTAGAGAACCAAGGGATCCATTGCCACCACACCTCCACCTCATCTGTGACCAGAGTCTATGACTTGGATGAGAATTAGGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| 3UTR CCA 90 bp | AATGTCCCAGAACTCTATTCATGCGGTCTTCAGTATGAGGAGCGCTaGAGCACTTGTAATCATGTCTGCCCTCCCCAAAGTCATTCGAAA | + |
|
Preference number: 1 (lower is better) Translates to: NVPELYSCGLQYEER*STCNHVCPPQSHSK Trigger: TTTCGAATGACTTTGGGGAGGGCAGACATGATTACAAGTGCTCCAGCGCTCCTCATACTGAAGACCGCATGAATAGAGTTCTGGGACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR TCA 90 bp | CCTCCCCAAAGTCATTCGAAAGAGAAGGCAGTCTTGGAGGGTAAGTaGCTTGTAAAGTTTGGTGATTTAGGTATTCAAAGACTGACGAGG | + |
|
Preference number: 1 (lower is better) Translates to: PPQSHSKEKAVLEGK*LVKFGDLGIQRLTR Trigger: CCTCGTCAGTCTTTGAATACCTAAATCACCAAACTTTACAAGTCACTTACCCTCCAAGACTGCCTTCTCTTTCGAATGACTTTGGGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR CCA 90 bp | TCCTGCTCTATCTGCTGTTCATTATGTGTGGGAGGAATCTGGAGGTaGGACAGACATTACTTATTAACTTCAGTAGGGGGATCAAATCAA | + |
|
Preference number: 1 (lower is better) Translates to: SCSICCSLCVGGIWR*DRHYLLTSVGGSNQ Trigger: TTGATTTGATCCCCCTACTGAAGTTAATAAGTAATGTCTGTCCCACCTCCAGATTCCTCCCACACATAATGAACAGCAGATAGAGCAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR-3UTR TCA 90 bp | TGGGCCCACTTCCCCCACCCAACTCATTGTCTTGATCAAGGAGGCAGTCGGGCTGCCGGCTCACCTTGCTaGGCTCTGGACTGGCTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: WAHFPHPTHCLDQGGSRAAGSPC*ALDWLR Trigger: CCTCAGCCAGTCCAGAGCTCAGCAAGGTGAGCCGGC...AGCCCGACTGCCTCCTTGATCAAGACAATGAGTTGGGTGGGGGAAGTGGGCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR-3UTR CCA 90 bp | ACAGAACTGAGGGTCCACACCCCACATCTGGGCTTCTCACCGTGGGACCTGCCCCTCTCCCACCTGGGATaGCCACCCAGCCAGAAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: TELRVHTPHLGFSPWDLPLSHLG*PPSQKQ Trigger: TTGCTTCTGGCTGGGTGGCCATCCCAGGTGGGAGAG...GGGCAGGTCCCACGGTGAGAAGCCCAGATGTGGGGTGTGGACCCTCAGTTCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR-3UTR TCA 90 bp | AGAACTGAGGGTCCACACCCCACATCTGGGCTTCTCACCGTGGGACCTGCCCTAGAGCTCTGGACTGGCTaGGGTTCCAAGGGCAGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: RTEGPHPTSGLLTVGPALELWTG*GSKGRS Trigger: AGACCTGCCCTTGGAACCTCAGCCAGTCCAGAGCTC...TAGGGCAGGTCCCACGGTGAGAAGCCCAGATGTGGGGTGTGGACCCTCAGTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTCCCCAGAATTCGGGGAGCACTGGAGATGGAAAGATGAGGTGCCTGGTCACCGCCCACCGGAAAACCTaGCCTTTCCTTAGGATGCAA | + |
|
Preference number: 2 (lower is better) Translates to: PPQNSGSTGDGKMRCLVTAHRKT*PFLRMQ Trigger: TTGCATCCTAAGGAAAGGGCAGGTTTTCCGGTGGGC...GGTGACCAGGCACCTCATCTTTCCATCTCCAGTGCTCCCCGAATTCTGGGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR-3UTR CCA 90 bp | TGTAGGCCAAAGTCAGGAGGAACTGTCAGGATCTTTCCTGCCTGCCGAATGTCCAGGATCTCTCCCACCTaGGATGGCCACCCAGCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: CRPKSGGTVRIFPACRMSRISPT*DGHPAR Trigger: TCTGGCTGGGTGGCCATCCCAGGTGGGAGAGATCCT...GGACATTCGGCAGGCAGGAAAGATCCTGACAGTTCCTCCTGACTTTGGCCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR-3UTR GCA 90 bp | ACAGAACTGAGGGTCCACACCCCACATCTGGGCTTCTCACCGTGGGACCTGCCCTGTCAGCAATCCAGATaGACAGAGAAAGCCTCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: TELRVHTPHLGFSPWDLPCQQSR*TEKASC Trigger: ACAAGAGGCTTTCTCTGTGCATCTGGATTGCTGACA...GGGCAGGTCCCACGGTGAGAAGCCCAGATGTGGGGTGTGGACCCTCAGTTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTCCCCAGAATTCGGGGAGCACTGGAGATGGAAAGATGAGGTGCCTGGTCACCGAGGTGTGGTGGCAATaGATCCCTTGGTTCTCTAGA | + |
|
Preference number: 2 (lower is better) Translates to: PPQNSGSTGDGKMRCLVTEVWWQ*IPWFSR Trigger: TCTAGAGAACCAAGGGATCCATTGCCACCACACCTC...GGTGACCAGGCACCTCATCTTTCCATCTCCAGTGCTCCCCGAATTCTGGGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR CAA 90 bp | GCAGATGGGGGAATGTCAGCAATCCAGATGCACAGAGAAAGCCTCTaGTCGGGAGGAAGGCTGATTGATGCAGGTGACAACCCCAGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: ADGGMSAIQMHRESL*SGGRLIDAGDNPSH Trigger: ATGGCTGGGGTTGTCACCTGCATCAATCAGCCTTCCTCCCGACAAGAGGCTTTCTCTGTGCATCTGGATTGCTGACATTCCCCCATCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| 3UTR CAA 90 bp | TCTAGGAAGCCACTGCCTACATCCCCAGGTAGGCAGTCTTTGGGTTaGGGTCTCTGCAGTGCTGTCTCCTTTAAGCCTTCTCACCATGGC | + |
|
Preference number: 2 (lower is better) Translates to: SRKPLPTSPGRQSLG*GLCSAVSFKPSHHG Trigger: GCCATGGTGAGAAGGCTTAAAGGAGACAGCACTGCAGAGACCCAAACCCAAAGACTGCCTACCTGGGGATGTAGGCAGTGGCTTCCTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR CAA 90 bp | TTGGCCTCTAGGAAGCCACTGCCTACATCCCCAGGTAGGCAGTCTTaGGGTTTGGGTCTCTGCAGTGCTGTCTCCTTTAAGCCTTCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: LASRKPLPTSPGRQS*GLGLCSAVSFKPSH Trigger: GTGAGAAGGCTTAAAGGAGACAGCACTGCAGAGACCCAAACCCAAAGACTGCCTACCTGGGGATGTAGGCAGTGGCTTCCTAGAGGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR-3UTR TCA 90 bp | CAAAGAACACCTCTGAGCATCATCTCCTCAACACCAGAGAGAGCTGCACGGTATGAGCTCTGGACTGGCTaGGGTTCCAAGGGCAGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: QRTPLSIISSTPERAARYELWTG*GSKGRS Trigger: AGACCTGCCCTTGGAACCTCAGCCAGTCCAGAGCTC...ATACCGTGCAGCTCTCTCTGGTGTTGAGGAGATGATGCTCAGAGGTGTTCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| 3UTR-3UTR GCA 90 bp | AACAGAACTGAGGGTCCACACCCCACATCTGGGCTTCTCACCGTGGGACCTGCCCACTGCCCACTTGCCTaGTTCATAGGTTTAGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: NRTEGPHPTSGLLTVGPAHCPLA*FIGLEK Trigger: TTTCTCTAAACCTATGAAGCAGGCAAGTGGGCAGTG...GGCAGGTCCCACGGTGAGAAGCCCAGATGTGGGGTGTGGACCCTCAGTTCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR-3UTR GCA 90 bp | AGTCATAGACTCTGGTCACAGATGAGGTGGAGGTGTGGTGGCAATGGATCCCTTGGTCCCAGGAGGCACTaGCCACTTGCCTGCTTCATA | + |
|
Preference number: 2 (lower is better) Translates to: SHRLWSQMRWRCGGNGSLGPRRH*PLACFI Trigger: TATGAAGCAGGCAAGTGGGCAGTGCCTCCTGGGACC...AAGGGATCCATTGCCACCACACCTCCACCTCATCTGTGACCAGAGTCTATGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR-3UTR CCA 90 bp | CCTCCCCAGAATTCGGGGAGCACTGGAGATGGAAAGATGAGGTGCCTGGTCACCAGAAGAACAGGCAGATaGGGGAATGTCAGCAATCCA | + |
|
Preference number: 2 (lower is better) Translates to: PPQNSGSTGDGKMRCLVTRRTGR*GNVSNP Trigger: TGGATTGCTGACATTCCCCCATCTGCCTGTTCTTCT...GGTGACCAGGCACCTCATCTTTCCATCTCCAGTGCTCCCCGAATTCTGGGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR-3UTR CCA 90 bp | GCAAAGAACACCTCTGAGCATCATCTCCTCAACACCAGAGAGAGCTGCACGGTAGCTGTTCTCCTGGGATaGCCACCCAGCCAGAAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: AKNTSEHHLLNTRESCTVAVLLG*PPSQKQ Trigger: TTGCTTCTGGCTGGGTGGCCATCCCAGGAGAACAGC...TACCGTGCAGCTCTCTCTGGTGTTGAGGAGATGATGCTCAGAGGTGTTCTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236038.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCCAAGGGTCTTGCGGCTTTAAACAGGAAGAAGTCCTCTTCATCTTAGCAGCAAGCAGGCTGTTCTCCTaGGATGGCCACCCAGCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: PQGSCGFKQEEVLFILAASRLFS*DGHPAR Trigger: TCTGGCTGGGTGGCCATCCCAGGAGAACAGCCTGCT...TGCTGCTAAGATGAAGAGGACTTCTTCCTGTTTAAAGCCGCAAGACCCTTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236038.2 |
||
| 3UTR-3UTR CCA 90 bp | ACAACAAGGATTCTTCTCCAGATCTGGACTCTTTCTTGGCCTCTAGGAAGCCACAGGGCAGGTCTCTCATaGCCTCTTCTCGGAAGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: TTRILLQIWTLSWPLGSHRAGLS*PLLGSP Trigger: GGGGCTTCCGAGAAGAGGCCATGAGAGACCTGCCCT...GTGGCTTCCTAGAGGCCAAGAAAGAGTCCAGATCTGGAGAAGAATCCTTGTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR-3UTR CCA 90 bp | TACAGGGACTCAGGGACAGGCAAAGACTTCTTCAGTATCAAGAATCTGGGAGGGGGCAGTCTTTGGGTTTaGGTCTCTGCAGTGCTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: YRDSGTGKDFFSIKNLGGGSLWV*VSAVLS Trigger: AGACAGCACTGCAGAGACCCAAACCCAAAGACTGCC...CCCTCCCAGATTCTTGATACTGAAGAAGTCTTTGCCTGTCCCTGAGTCCCTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR-3UTR GCA 90 bp | GGCTTAAAGGGCCAGGCAAAGAACACCTCTGAGCATCATCTCCTCAACACCAGAGAGTCCGGGTTGATTTaGTGTTCTGTCCAATGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: GLKGQAKNTSEHHLLNTRESGLI*CSVQWN Trigger: GTTCCATTGGACAGAACAGCAAATCAACCCGGACTC...TCTGGTGTTGAGGAGATGATGCTCAGAGGTGTTCTTTGCCTGGCCCTTTAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| 3UTR-3UTR GCA 90 bp | CCCTCCCCAAGGAAACAACAGGATATCAGAAGAACAGGCAGATGGGGGAATGTCGAGTCCGGGTTGATTTaGTGTTCTGTCCAATGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: PSPRKQQDIRRTGRWGNVESGLI*CSVQWN Trigger: GTTCCATTGGACAGAACAGCAAATCAACCCGGACTC...GACATTCCCCCATCTGCCTGTTCTTCTGATATCCTGTTGTTTCCTTGGGGAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| 3UTR-3UTR CCA 90 bp | ACAACAAGGATTCTTCTCCAGATCTGGACTCTTTCTTGGCCTCTAGGAAGCCACCAGGTAGGCAGTCTTTaGGTTTGGGTCTCTGCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: TTRILLQIWTLSWPLGSHQVGSL*VWVSAV Trigger: CACTGCAGAGACCCAAACCCAAAGACTGCCTACCTG...GTGGCTTCCTAGAGGCCAAGAAAGAGTCCAGATCTGGAGAAGAATCCTTGTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR-3UTR TCA 90 bp | AGTCATAGACTCTGGTCACAGATGAGGTGGAGGTGTGGTGGCAATGGATCCCTTACCCTAGAGGGTATCTaGGCATCTTTACAACAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: SHRLWSQMRWRCGGNGSLTLEGI*ASLQQN Trigger: GTTCTGTTGTAAAGATGCTCAGATACCCTCTAGGGT...AAGGGATCCATTGCCACCACACCTCCACCTCATCTGTGACCAGAGTCTATGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTAGGCCAAAGTCAGGAGGAACTGTCAGGATCTTTCCTGCCTGCCGAATGTCCGGAGGAATCTGGAGGTaGGACAGACATTACTTATTA | + |
|
Preference number: 2 (lower is better) Translates to: CRPKSGGTVRIFPACRMSGGIWR*DRHYLL Trigger: TAATAAGTAATGTCTGTCCCACCTCCAGATTCCTCC...GGACATTCGGCAGGCAGGAAAGATCCTGACAGTTCCTCCTGACTTTGGCCTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR CAA 90 bp | GTGTGCTGGAAACTAAATGTTGTTCCTCTCCAAGAGTTCACATTCTaGACCACTGAACCATCTCTCCAGTCCTCCTCTCTTAACTCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: VCWKLNVVPLQEFTF*TTEPSLQSSSLNSK Trigger: CTTAGAGTTAAGAGAGGAGGACTGGAGAGATGGTTCAGTGGTCAAGAATGTGAACTCTTGGAGAGGAACAACATTTAGTTTCCAGCACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR-3UTR TCA 90 bp | CTATCTGCTGTTCATTATGTGTGGGAGGAATCTGGAGGTGGGACAGACATTACTAGTTCTTCCATTGGGTaGGAGAAATCAGAATTATAC | + |
|
Preference number: 2 (lower is better) Translates to: LSAVHYVWEESGGGTDITSSSIG*EKSELY Trigger: GTATAATTCTGATTTCTCTCACCCAATGGAAGAACT...AGTAATGTCTGTCCCACCTCCAGATTCCTCCCACACATAATGAACAGCAGATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR GCA 72 bp | AATGGGAGCCCTGTCCGTGCATGGCGGGGATACATCTaGCAGACTCCCAGCCAGCCCCACCCTGGCTTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: NGSPVRAWRGYI*QTPSQPHPGLC Trigger: GCACAAGCCAGGGTGGGGCTGGCTGGGAGTCTGGCAGATGTATCCCCGCCATGCACGGACAGGGCTCCCATT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR CCA 72 bp | GCAGCCATTAGCGATAATGGGAGCCCTGTCCGTGCATaGCGGGGATACATCTGCCAGACTCCCAGCCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: AAISDNGSPVRA*RGYICQTPSQP Trigger: GGGCTGGCTGGGAGTCTGGCAGATGTATCCCCGCCATGCACGGACAGGGCTCCCATTATCGCTAATGGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR GCA 72 bp | GAGGTGCCCACCGGAAAACCTGCCCTTTCCTTAGGATaGAAAGGACCCTGGGCCCACTTCCCCCACCCAACT | + |
|
Preference number: 3 (lower is better) Translates to: EVPTGKPALSLG*KGPWAHFPHPT Trigger: AGTTGGGTGGGGGAAGTGGGCCCAGGGTCCTTTGCATCCTAAGGAAAGGGCAGGTTTTCCGGTGGGCACCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR CCA 72 bp | CACATTCCCTATCCCCAGGATCTCTCCCACCTGGGATaGCCACCCAGCCAGAAGCAAGGACCACAGGAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: HIPYPQDLSHLG*PPSQKQGPQED Trigger: GTCCTCCTGTGGTCCTTGCTTCTGGCTGGGTGGCCATCCCAGGTGGGAGAGATCCTGGGGATAGGGAATGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR TCA 72 bp | ACCCTGGGCCCACTTCCCCCACCCAACTCATTGTCTTaGTCAAGGAGGCAGTCGGGCTGCACTGCTTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: TLGPLPPPNSLS*SRRQSGCTAFS Trigger: AGAGAAAGCAGTGCAGCCCGACTGCCTCCTTGATCAAGACAATGAGTTGGGTGGGGGAAGTGGGCCCAGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR-3UTR CAA 90 bp | TGGGCCCACTTCCCCCACCCAACTCATTGTCTTGATCAAGGAGGCAGTCGGGCTCACAGAGAAAGCCTCTaGTCGGGAGGAAGGCTGATT | + |
|
Preference number: 3 (lower is better) Translates to: WAHFPHPTHCLDQGGSRAHRESL*SGGRLI Trigger: AATCAGCCTTCCTCCCGACAAGAGGCTTTCTCTGTG...AGCCCGACTGCCTCCTTGATCAAGACAATGAGTTGGGTGGGGGAAGTGGGCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR CCA 72 bp | GTGCTCTGTGAGACCTCCCCAGAATTCGGGGAGCACTaGAGATGGAAAGATGAGGTGCCTGGTCACCGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: VLCETSPEFGEH*RWKDEVPGHRF Trigger: GAAACGGTGACCAGGCACCTCATCTTTCCATCTCCAGTGCTCCCCGAATTCTGGGGAGGTCTCACAGAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR CCA 72 bp | GGAAGCCACTGCCTACATCCCCAGGTAGGCAGTCTTTaGGTTTGGGTCTCTGCAGTGCTGTCTCCTTTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: GSHCLHPQVGSL*VWVSAVLSPLS Trigger: GCTTAAAGGAGACAGCACTGCAGAGACCCAAACCCAAAGACTGCCTACCTGGGGATGTAGGCAGTGGCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR TCA 72 bp | CAAGTGCTTTTACCCACCGATCCATCTCACTGGTCCTaGATGGTGCTTCCAGATGTGGTCTTCCCCAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: QVLLPTDPSHWS*MVLPDVVFPRT Trigger: GGTCCTGGGGAAGACCACATCTGGAAGCACCATTCAGGACCAGTGAGATGGATCGGTGGGTAAAAGCACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR GCA 72 bp | ACATCCCCAGGTAGGCAGTCTTTGGGTTTGGGTCTCTaGAGTGCTGTCTCCTTTAAGCCTTCTCACCATGGC | + |
|
Preference number: 3 (lower is better) Translates to: TSPGRQSLGLGL*SAVSFKPSHHG Trigger: GCCATGGTGAGAAGGCTTAAAGGAGACAGCACTGCAGAGACCCAAACCCAAAGACTGCCTACCTGGGGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR CCA 72 bp | ACAGATGAGGTGGAGGTGTGGTGGCAATGGATCCCTTaGTTCTCTAGAGTCATTCATGTCAGCAGCACCCCC | + |
|
Preference number: 3 (lower is better) Translates to: TDEVEVWWQWIP*FSRVIHVSSTP Trigger: GGGGGTGCTGCTGACATGAATGACTCTAGAGAACCAAGGGATCCATTGCCACCACACCTCCACCTCATCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| 3UTR CCA 72 bp | TGCTTTTACCCACCGATCCATCTCACTGGTCCTGAATaGTGCTTCCAGATGTGGTCTTCCCCAGGACCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: CFYPPIHLTGPE*CFQMWSSPGPE Trigger: CTCTGGTCCTGGGGAAGACCACATCTGGAAGCACCATTCAGGACCAGTGAGATGGATCGGTGGGTAAAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR CCA 72 bp | ACGTGGGACGCAGGATTAAACTCGGGCCATTTGGCTTaGAGGCAAGTGCTTTTACCCACCGATCCATCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: TWDAGLNSGHLA*RQVLLPTDPSH Trigger: GTGAGATGGATCGGTGGGTAAAAGCACTTGCCTCCAAGCCAAATGGCCCGAGTTTAATCCTGCGTCCCACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR TCA 72 bp | ACCCATCAGCAATTGCCCTTGAGTGTGAGTCCGGGTTaGTTTGCTGTTCTGTCCAATGGAACCCCAAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: THQQLPLSVSPG*FAVLSNGTPRV Trigger: GACCCTTGGGGTTCCATTGGACAGAACAGCAAATCAACCCGGACTCACACTCAAGGGCAATTGCTGATGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| 3UTR TCA 72 bp | GCAAAGTGGCTTAAAGGGCCAGGCAAAGAACACCTCTaGGCATCATCTCCTCAACACCAGAGAGAGCTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: AKWLKGPGKEHL*ASSPQHQRELH Trigger: GTGCAGCTCTCTCTGGTGTTGAGGAGATGATGCTCAGAGGTGTTCTTTGCCTGGCCCTTTAAGCCACTTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| 3UTR GCA 72 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTaGCTGTGTCCTTCACATTCCCTATCCCCAGGATCT | + |
|
Preference number: 3 (lower is better) Translates to: VCVCVCVCVCVV*LCPSHSLSPGS Trigger: AGATCCTGGGGATAGGGAATGTGAAGGACACAGGCACACCACACACACACACACACACACACACACACACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR GCA 72 bp | CTTTCCTGCCTGCCGAATGTCCCAGAACTCTATTCATaGGGTCTTCAGTATGAGGAGCGCTGGAGCACTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LSCLPNVPELYS*GLQYEERWSTC Trigger: ACAAGTGCTCCAGCGCTCCTCATACTGAAGACCGCATGAATAGAGTTCTGGGACATTCGGCAGGCAGGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR CCA 72 bp | TGTGAGACCTCCCCAGAATTCGGGGAGCACTGGAGATaGAAAGATGAGGTGCCTGGTCACCGTTTCATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: CETSPEFGEHWR*KDEVPGHRFIS Trigger: AGAAATGAAACGGTGACCAGGCACCTCATCTTTCCATCTCCAGTGCTCCCCGAATTCTGGGGAGGTCTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR CCA 72 bp | ATCCATCTCACTGGTCCTGAATGGTGCTTCCAGATGTaGTCTTCCCCAGGACCAGAGAAACGGTTCAGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: IHLTGPEWCFQM*SSPGPEKRFRL Trigger: CAACCTGAACCGTTTCTCTGGTCCTGGGGAAGACCACATCTGGAAGCACCATTCAGGACCAGTGAGATGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR-3UTR CAA 90 bp | TCACAGATGAGGTGGAGGTGTGGTGGCAATGGATCCCTTGGTTCTCTAGAGTCAAGCAGGCTGTTCTCCTaGGAGGACATGTGTTTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: SQMRWRCGGNGSLGSLESSRLFS*EDMCLG Trigger: ACCTAAACACATGTCCTCCAAGGAGAACAGCCTGCT...TGACTCTAGAGAACCAAGGGATCCATTGCCACCACACCTCCACCTCATCTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR TCA 72 bp | CTTTTGGTCACACAAGGACTCGAACTTGACAGGTCTTaGAAGACCATGTGCTTTCCAGAGGTCCAGCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LLVTQGLELDRS*KTMCFPEVQLP Trigger: GGGCAGCTGGACCTCTGGAAAGCACATGGTCTTTCAAGACCTGTCAAGTTCGAGTCCTTGTGTGACCAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR GCA 72 bp | CAGTATGAGGAGCGCTGGAGCACTTGTAATCATGTCTaGCCTCCCCAAAGTCATTCGAAAGAGAAGGCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: QYEERWSTCNHV*PPQSHSKEKAV Trigger: GACTGCCTTCTCTTTCGAATGACTTTGGGGAGGGCAGACATGATTACAAGTGCTCCAGCGCTCCTCATACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR GCA 72 bp | CCAAAGTCAGGAGGAACTGTCAGGATCTTTCCTGCCTaGCGAATGTCCCAGAACTCTATTCATGCGGTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: PKSGGTVRIFPA*RMSQNSIHAVF Trigger: GAAGACCGCATGAATAGAGTTCTGGGACATTCGGCAGGCAGGAAAGATCCTGACAGTTCCTCCTGACTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR GCA 72 bp | AACCTAACTCCAGCATCTCCTCACCTTGGGCTGGAATaGACAGGACAAACACAGGCACGCATAGTGCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: NLTPASPHLGLE*TGQTQARIVLF Trigger: AAAGAGCACTATGCGTGCCTGTGTTTGTCCTGTGCATTCCAGCCCAAGGTGAGGAGATGCTGGAGTTAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR CCA 72 bp | GAGTGTGAGTCCGGGTTGATTTGCTGTTCTGTCCAATaGAACCCCAAGGGTCTTGCGGCTTTAAACAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: ECESGLICCSVQ*NPKGLAALNRK Trigger: CTTCCTGTTTAAAGCCGCAAGACCCTTGGGGTTCCATTGGACAGAACAGCAAATCAACCCGGACTCACACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| 3UTR CCA 72 bp | ACTCTGGTCACAGATGAGGTGGAGGTGTGGTGGCAATaGATCCCTTGGTTCTCTAGAGTCATTCATGTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: TLVTDEVEVWWQ*IPWFSRVIHVS Trigger: GCTGACATGAATGACTCTAGAGAACCAAGGGATCCATTGCCACCACACCTCCACCTCATCTGTGACCAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| 3UTR GCA 72 bp | GGACATGTGTTTAGGTCCCAGGAGGCACTGCCCACTTaGCTGCTTCATAGGTTTAGAGAAAGAAAGCATGGT | + |
|
Preference number: 3 (lower is better) Translates to: GHVFRSQEALPT*LLHRFRERKHG Trigger: ACCATGCTTTCTTTCTCTAAACCTATGAAGCAGGCAAGTGGGCAGTGCCTCCTGGGACCTAAACACATGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR GCA 72 bp | TCCTTGGAGGACATGTGTTTAGGTCCCAGGAGGCACTaGCCACTTGCCTGCTTCATAGGTTTAGAGAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SLEDMCLGPRRH*PLACFIGLEKE Trigger: TTCTTTCTCTAAACCTATGAAGCAGGCAAGTGGGCAGTGCCTCCTGGGACCTAAACACATGTCCTCCAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR CCA 72 bp | TCTCATCCAAGTCATAGACTCTGGTCACAGATGAGGTaGAGGTGTGGTGGCAATGGATCCCTTGGTTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: SHPSHRLWSQMR*RCGGNGSLGSL Trigger: TAGAGAACCAAGGGATCCATTGCCACCACACCTCCACCTCATCTGTGACCAGAGTCTATGACTTGGATGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| 3UTR CCA 72 bp | ACAACAAGGATTCTTCTCCAGATCTGGACTCTTTCTTaGCCTCTAGGAAGCCACTGCCTACATCCCCAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: TTRILLQIWTLS*PLGSHCLHPQV Trigger: TACCTGGGGATGTAGGCAGTGGCTTCCTAGAGGCCAAGAAAGAGTCCAGATCTGGAGAAGAATCCTTGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR CCA 72 bp | GAACTCTATTCATGCGGTCTTCAGTATGAGGAGCGCTaGAGCACTTGTAATCATGTCTGCCCTCCCCAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: ELYSCGLQYEER*STCNHVCPPQS Trigger: ACTTTGGGGAGGGCAGACATGATTACAAGTGCTCCAGCGCTCCTCATACTGAAGACCGCATGAATAGAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR TCA 72 bp | CTAATTCTCATCCAAGTCATAGACTCTGGTCACAGATaGGGTGGAGGTGTGGTGGCAATGGATCCCTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: LILIQVIDSGHR*GGGVVAMDPLV Trigger: AACCAAGGGATCCATTGCCACCACACCTCCACCTCATCTGTGACCAGAGTCTATGACTTGGATGAGAATTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| 3UTR CCA 72 bp | CCCCCACATCCTGCTCTATCTGCTGTTCATTATGTGTaGGAGGAATCTGGAGGTGGGACAGACATTACTTAT | + |
|
Preference number: 3 (lower is better) Translates to: PPHPALSAVHYV*EESGGGTDITY Trigger: ATAAGTAATGTCTGTCCCACCTCCAGATTCCTCCCACACATAATGAACAGCAGATAGAGCAGGATGTGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR GCA 72 bp | CAGAATTCGGGGAGCACTGGAGATGGAAAGATGAGGTaGCTGGTCACCGTTTCATTTCTTTCAGTCACTTTT | + |
|
Preference number: 3 (lower is better) Translates to: QNSGSTGDGKMR*LVTVSFLSVTF Trigger: AAAAGTGACTGAAAGAAATGAAACGGTGACCAGGCACCTCATCTTTCCATCTCCAGTGCTCCCCGAATTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR CCA 72 bp | TCTGGGAGGGAAATGTGTATTAACAGTCTTGGAATGTaGGGTGCAGTGAACCCAAGAATCCAGAGTTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SGREMCINSLGM*GAVNPRIQSSR Trigger: TCTGGAACTCTGGATTCTTGGGTTCACTGCACCCCACATTCCAAGACTGTTAATACACATTTCCCTCCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR GCA 72 bp | GATTTGCTGTTCTGTCCAATGGAACCCCAAGGGTCTTaGGGCTTTAAACAGGAAGAAGTCCTCTTCATCTTA | + |
|
Preference number: 3 (lower is better) Translates to: DLLFCPMEPQGS*GFKQEEVLFIL Trigger: TAAGATGAAGAGGACTTCTTCCTGTTTAAAGCCGCAAGACCCTTGGGGTTCCATTGGACAGAACAGCAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| 3UTR TCA 72 bp | TTAGTATTCCCTTTTGGTCACACAAGGACTCGAACTTaGCAGGTCTTGAAAGACCATGTGCTTTCCAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LVFPFGHTRTRT*QVLKDHVLSRG Trigger: ACCTCTGGAAAGCACATGGTCTTTCAAGACCTGTCAAGTTCGAGTCCTTGTGTGACCAAAAGGGAATACTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR CCA 72 bp | ATCTGCTGTTCATTATGTGTGGGAGGAATCTGGAGGTaGGACAGACATTACTTATTAACTTCAGTAGGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: ICCSLCVGGIWR*DRHYLLTSVGG Trigger: TCCCCCTACTGAAGTTAATAAGTAATGTCTGTCCCACCTCCAGATTCCTCCCACACATAATGAACAGCAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR GCA 72 bp | CTGGTCACCGTTTCATTTCTTTCAGTCACTTTTGTGTaGCTACCAGCATATTTCAAACAAAGAGATGAATCT | + |
|
Preference number: 3 (lower is better) Translates to: LVTVSFLSVTFV*LPAYFKQRDES Trigger: AGATTCATCTCTTTGTTTGAAATATGCTGGTAGGCACACAAAAGTGACTGAAAGAAATGAAACGGTGACCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR CCA 72 bp | TTGAAGGATAAGGTATTTTCTGCTTGGCATGTTTTATaGCCTGTTATTATCTTCTATACATGCCTCGTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LKDKVFSAWHVL*PVIIFYTCLVP Trigger: AGGCACGAGGCATGTATAGAAGATAATAACAGGCCATAAAACATGCCAAGCAGAAAATACCTTATCCTTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| CDS-3UTR TCA 90 bp | ACAACCCCAGCCATGCACACAGCACAGCCGGCTCACCTTGCTGAGCTCTGGACTGACACCGTGGTACCCTaGGGGCGGGGGCCGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TTPAMHTAQPAHLAELWTDTVVP*GRGPAL Trigger: CAGGGCCGGCCCCCGCCCTCAGGGTACCACGGTGTC...AGTCCAGAGCTCAGCAAGGTGAGCCGGCTGTGCTGTGTGCATGGCTGGGGTTGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGGATGGCCACCCAGCCAGAAGCAAGGACCACAGGAGGACCGGCACTGGGGTGCAGAAGAGGCCTGTaGCCAGGAGTGGCGCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PGMATQPEARTTGGPALGCRRGL*PGVALP Trigger: CGGAAGCGCCACTCCTGGCCACAGGCCTCTTCTGCA...CCCCAGTGCCGGTCCTCCTGTGGTCCTTGCTTCTGGCTGGGTGGCCATCCCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGGATGGCCACCCAGCCAGAAGCAAGGACCACAGGAGGACCGGCACTGGGGCCCTCCAGGGCAGGCTaGAGTTGTCCTTATGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGMATQPEARTTGGPALGPSRAG*SCPYVA Trigger: GGCTACATAAGGACAACTCCAGCCTGCCCTGGAGGG...CCCCAGTGCCGGTCCTCCTGTGGTCCTTGCTTCTGGCTGGGTGGCCATCCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGCTGTTCTCCTGGGATGGCCACCCAGCCAGAAGCAAGGACCACAGGAGGATGCAGAAGAGGCCTGTaGCCAGGAGTGGCGCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: AGCSPGMATQPEARTTGGCRRGL*PGVALP Trigger: CGGAAGCGCCACTCCTGGCCACAGGCCTCTTCTGCA...TCCTCCTGTGGTCCTTGCTTCTGGCTGGGTGGCCATCCCAGGAGAACAGCCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236038.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGGATGGCCACCCAGCCAGAAGCAAGGACCACAGGAGGACCGGCACTGGGGTCCCACTGGTGTTGCTaGGCAGCCGTGCTATACATC | + |
|
Preference number: 4 (lower is better) Translates to: PGMATQPEARTTGGPALGSHWCC*AAVLYI Trigger: GATGTATAGCACGGCTGCCCAGCAACACCAGTGGGA...CCCCAGTGCCGGTCCTCCTGTGGTCCTTGCTTCTGGCTGGGTGGCCATCCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR TCA 90 bp | TCACAGATGAGGTGGAGGTGTGGTGGCAATGGATCCCTTGGTTCTCTAGAGTCAGACACCGTGGTACCCTaGGGGCGGGGGCCGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQMRWRCGGNGSLGSLESDTVVP*GRGPAL Trigger: CAGGGCCGGCCCCCGCCCTCAGGGTACCACGGTGTC...TGACTCTAGAGAACCAAGGGATCCATTGCCACCACACCTCCACCTCATCTGTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR TCA 90 bp | ACAGAACTGAGGGTCCACACCCCACATCTGGGCTTCTCACCGTGGGACCTGCCCTTTCTGCACCGTCTCTaGGAGGGACACCGTGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: TELRVHTPHLGFSPWDLPFLHRL*EGHRGT Trigger: GGTACCACGGTGTCCCTCTCAGAGACGGTGCAGAAA...GGGCAGGTCCCACGGTGAGAAGCCCAGATGTGGGGTGTGGACCCTCAGTTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR TCA 90 bp | AACAGAACTGAGGGTCCACACCCCACATCTGGGCTTCTCACCGTGGGACCTGCCGGTACCAGGGGCAGCTaGCATTCACGAAGGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: NRTEGPHPTSGLLTVGPAGTRGS*HSRRNL Trigger: CAGGTTCCTTCGTGAATGTCAGCTGCCCCTGGTACC...GGCAGGTCCCACGGTGAGAAGCCCAGATGTGGGGTGTGGACCCTCAGTTCTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR TCA 90 bp | AGAACTGAGGGTCCACACCCCACATCTGGGCTTCTCACCGTGGGACCTGCCCTAGCCAACAAGGATGGCTaGAGCGATGACCAAGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: RTEGPHPTSGLLTVGPALANKDG*SDDQGG Trigger: TCCGCCTTGGTCATCGCTTCAGCCATCCTTGTTGGC...TAGGGCAGGTCCCACGGTGAGAAGCCCAGATGTGGGGTGTGGACCCTCAGTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| 3UTR CAA 72 bp | GACCCTGGGCCCACTTCCCCCACCCAACTCATTGTCTaGATCAAGGAGGCAGTCGGGCTGCACTGCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DPGPTSPTQLIV*IKEAVGLHCFL Trigger: GAGAAAGCAGTGCAGCCCGACTGCCTCCTTGATCAAGACAATGAGTTGGGTGGGGGAAGTGGGCCCAGGGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| CDS-3UTR TCA 90 bp | CCTCTTCTCGGAAGCCCCAATTCCACCCATCAGCAATTGCCCTTGAGTGTGAGTCTGTGGCCCCACTGCTaGCGCTGCTGGTGGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: PLLGSPNSTHQQLPLSVSLWPHC*RCWWDT Trigger: AGTGTCCCACCAGCAGCGTCAGCAGTGGGGCCACAG...ACTCACACTCAAGGGCAATTGCTGATGGGTGGAATTGGGGCTTCCGAGAAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTAAAGGGCCAGGCAAAGAACACCTCTGAGCATCATCTCCTCAACACCAGACTGCGTACACGCTGCTaGCCACTGTGGCCCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLKGQAKNTSEHHLLNTRLRTRC*PLWPHC Trigger: GCAGTGGGGCCACAGTGGGCAGCAGCGTGTACGCAG...TCTGGTGTTGAGGAGATGATGCTCAGAGGTGTTCTTTGCCTGGCCCTTTAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR TCA 90 bp | ACAACCCCAGCCATGCACACAGCACAGCCGGCTCACCTTGCTGAGCTCTGGACTACAGTGCTCGGAGGATaGAGGATGCAAACAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TTPAMHTAQPAHLAELWTTVLGG*RMQTGS Trigger: TGAACCTGTTTGCATCCTTCATCCTCCGAGCACTGT...AGTCCAGAGCTCAGCAAGGTGAGCCGGCTGTGCTGTGTGCATGGCTGGGGTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR TCA 90 bp | CAGGTCTCTCATGGCCTCTTCTCGGAAGCCCCAATTCCACCCATCAGCAATTGCTGCTGGTGGGACACTTaGGGGGCTTCATGCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QVSHGLFSEAPIPPISNCCWWDT*GASCCS Trigger: ACTGCAGCATGAAGCCCCTCAAGTGTCCCACCAGCA...GCAATTGCTGATGGGTGGAATTGGGGCTTCCGAGAAGAGGCCATGAGAGACCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR TCA 90 bp | TACAGGGACTCAGGGACAGGCAAAGACTTCTTCAGTATCAAGAATCTGGGAGGGCTGTGGCCCCACTGCTaGCGCTGCTGGTGGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: YRDSGTGKDFFSIKNLGGLWPHC*RCWWDT Trigger: AGTGTCCCACCAGCAGCGTCAGCAGTGGGGCCACAG...CCCTCCCAGATTCTTGATACTGAAGAAGTCTTTGCCTGTCCCTGAGTCCCTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| CDS-3UTR GCA 90 bp | CAAAGAACACCTCTGAGCATCATCTCCTCAACACCAGAGAGAGCTGCACGGTATCTGCGTACACGCTGCTaGCCACTGTGGCCCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: QRTPLSIISSTPERAARYLRTRC*PLWPHC Trigger: GCAGTGGGGCCACAGTGGGCAGCAGCGTGTACGCAG...ATACCGTGCAGCTCTCTCTGGTGTTGAGGAGATGATGCTCAGAGGTGTTCTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR CCA 90 bp | CCCTCCCCAAGGAAACAACAGGATATCAGAAGAACAGGCAGATGGGGGAATGTCGCCTGTGGCCAGGAGTaGCGCTTCCGTGAGGAAACG | + |
|
Preference number: 4 (lower is better) Translates to: PSPRKQQDIRRTGRWGNVACGQE*RFREET Trigger: CGTTTCCTCACGGAAGCGCCACTCCTGGCCACAGGC...GACATTCCCCCATCTGCCTGTTCTTCTGATATCCTGTTGTTTCCTTGGGGAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR CCA 90 bp | GCAAAGAACACCTCTGAGCATCATCTCCTCAACACCAGAGAGAGCTGCACGGTAAGGAGCCCATCCCACTaGTGTTGCTGGGCAGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: AKNTSEHHLLNTRESCTVRSPSH*CCWAAV Trigger: CACGGCTGCCCAGCAACACCAGTGGGATGGGCTCCT...TACCGTGCAGCTCTCTCTGGTGTTGAGGAGATGATGCTCAGAGGTGTTCTTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR TCA 90 bp | CCCTCCCCAAGGAAACAACAGGATATCAGAAGAACAGGCAGATGGGGGAATGTCCCACGCAGTACTGCATaGGCAGGAACACCAGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSPRKQQDIRRTGRWGNVPRSTA*AGTPVG Trigger: GCCGACTGGTGTTCCTGCTCATGCAGTACTGCGTGG...GACATTCCCCCATCTGCCTGTTCTTCTGATATCCTGTTGTTTCCTTGGGGAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGAACACCTCTGAGCATCATCTCCTCAACACCAGAGAGAGCTGCACGGTATGCCTGTGGCCAGGAGTaGCGCTTCCGTGAGGAAACG | + |
|
Preference number: 4 (lower is better) Translates to: QRTPLSIISSTPERAARYACGQE*RFREET Trigger: CGTTTCCTCACGGAAGCGCCACTCCTGGCCACAGGC...ATACCGTGCAGCTCTCTCTGGTGTTGAGGAGATGATGCTCAGAGGTGTTCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR TCA 90 bp | CCCTCCCCAAGGAAACAACAGGATATCAGAAGAACAGGCAGATGGGGGAATGTCTTTCTGCACCGTCTCTaGGAGGGACACCGTGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: PSPRKQQDIRRTGRWGNVFLHRL*EGHRGT Trigger: GGTACCACGGTGTCCCTCTCAGAGACGGTGCAGAAA...GACATTCCCCCATCTGCCTGTTCTTCTGATATCCTGTTGTTTCCTTGGGGAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR TCA 90 bp | CAGGTCTCTCATGGCCTCTTCTCGGAAGCCCCAATTCCACCCATCAGCAATTGCTGCAGTGCAAGTGTCTaGAGCCAACAAGGATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QVSHGLFSEAPIPPISNCCSASV*SQQGWL Trigger: CAGCCATCCTTGTTGGCTTCAGACACTTGCACTGCA...GCAATTGCTGATGGGTGGAATTGGGGCTTCCGAGAAGAGGCCATGAGAGACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTTCTCGGAAGCCCCAATTCCACCCATCAGCAATTGCCCTTGAGTGTGAGTAGAGACCCTCAGCTGTaGAGAACCGGTACACATGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLLGSPNSTHQQLPLSVSRDPQL*RTGTHG Trigger: GCCATGTGTACCGGTTCTGCACAGCTGAGGGTCTCT...ACTCACACTCAAGGGCAATTGCTGATGGGTGGAATTGGGGCTTCCGAGAAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTAAAGGGCCAGGCAAAGAACACCTCTGAGCATCATCTCCTCAACACCAGACCATCCCACTGGTGTTaGTGGGCAGCCGTGCTATAC | + |
|
Preference number: 4 (lower is better) Translates to: GLKGQAKNTSEHHLLNTRPSHWC*WAAVLY Trigger: GTATAGCACGGCTGCCCAGCAACACCAGTGGGATGG...TCTGGTGTTGAGGAGATGATGCTCAGAGGTGTTCTTTGCCTGGCCCTTTAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTTCTCGGAAGCCCCAATTCCACCCATCAGCAATTGCCCTTGAGTGTGAGTGCTGCCACGCAGTACTaGATGAGCAGGAACACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PLLGSPNSTHQQLPLSVSAATQY*MSRNTS Trigger: ACTGGTGTTCCTGCTCATGCAGTACTGCGTGGCAGC...ACTCACACTCAAGGGCAATTGCTGATGGGTGGAATTGGGGCTTCCGAGAAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR GCA 90 bp | CAGGTCTCTCATGGCCTCTTCTCGGAAGCCCCAATTCCACCCATCAGCAATTGCCCAGTAGTAGTTGGCTaGCACGCAGTACTGCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: QVSHGLFSEAPIPPISNCPVVVG*HAVLHE Trigger: CTCATGCAGTACTGCGTGGCAGCCAACTACTACTGG...GCAATTGCTGATGGGTGGAATTGGGGCTTCCGAGAAGAGGCCATGAGAGACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| 3UTR CAA 72 bp | CCACTGCCTACATCCCCAGGTAGGCAGTCTTTGGGTTaGGGTCTCTGCAGTGCTGTCTCCTTTAAGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLPTSPGRQSLG*GLCSAVSFKPS Trigger: AGAAGGCTTAAAGGAGACAGCACTGCAGAGACCCAAACCCAAAGACTGCCTACCTGGGGATGTAGGCAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR CAA 72 bp | AGGAAGCCACTGCCTACATCCCCAGGTAGGCAGTCTTaGGGTTTGGGTCTCTGCAGTGCTGTCTCCTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: RKPLPTSPGRQS*GLGLCSAVSFK Trigger: CTTAAAGGAGACAGCACTGCAGAGACCCAAACCCAAAGACTGCCTACCTGGGGATGTAGGCAGTGGCTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| CDS-3UTR TCA 90 bp | CAAAGAACACCTCTGAGCATCATCTCCTCAACACCAGAGAGAGCTGCACGGTATTGCTGGTGGGACACTTaGGGGGCTTCATGCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QRTPLSIISSTPERAARYCWWDT*GASCCS Trigger: ACTGCAGCATGAAGCCCCTCAAGTGTCCCACCAGCA...ATACCGTGCAGCTCTCTCTGGTGTTGAGGAGATGATGCTCAGAGGTGTTCTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTAAAGGGCCAGGCAAAGAACACCTCTGAGCATCATCTCCTCAACACCAGAAGAGACCCTCAGCTGTaGAGAACCGGTACACATGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLKGQAKNTSEHHLLNTRRDPQL*RTGTHG Trigger: GCCATGTGTACCGGTTCTGCACAGCTGAGGGTCTCT...TCTGGTGTTGAGGAGATGATGCTCAGAGGTGTTCTTTGCCTGGCCCTTTAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR GCA 90 bp | AGTCATAGACTCTGGTCACAGATGAGGTGGAGGTGTGGTGGCAATGGATCCCTTCTCTGGATATTCAAGTaGTCCAGCCTCCAGCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SHRLWSQMRWRCGGNGSLLWIFK*SSLQRS Trigger: GGAGCGCTGGAGGCTGGAGCACTTGAATATCCAGAG...AAGGGATCCATTGCCACCACACCTCCACCTCATCTGTGACCAGAGTCTATGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR CCA 90 bp | GGCTTAAAGGGCCAGGCAAAGAACACCTCTGAGCATCATCTCCTCAACACCAGATCCCACTGGTGTTGCTaGGCAGCCGTGCTATACATC | + |
|
Preference number: 4 (lower is better) Translates to: GLKGQAKNTSEHHLLNTRSHWCC*AAVLYI Trigger: GATGTATAGCACGGCTGCCCAGCAACACCAGTGGGA...TCTGGTGTTGAGGAGATGATGCTCAGAGGTGTTCTTTGCCTGGCCCTTTAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR CCA 90 bp | GCAGCAATTGTTTCTTCCTCTCTTCCTGCCACGGTGATTAAATTAGCAGGCTGTAGGAGCCCATCCCACTaGTGTTGCTGGGCAGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: AAIVSSSLPATVIKLAGCRSPSH*CCWAAV Trigger: CACGGCTGCCCAGCAACACCAGTGGGATGGGCTCCT...ACAGCCTGCTAATTTAATCACCGTGGCAGGAAGAGAGGAAGAAACAATTGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR TCA 90 bp | TTCCAAGGGCAGGTCTCTCATGGCCTCTTCTCGGAAGCCCCAATTCCACCCATCTCACAAAGGCAAAGATaGCTTCATGTGTCCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FQGQVSHGLFSEAPIPPISQRQR*LHVSPE Trigger: TTCTGGGGACACATGAAGTCATCTTTGCCTTTGTGA...GATGGGTGGAATTGGGGCTTCCGAGAAGAGGCCATGAGAGACCTGCCCTTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR CCA 90 bp | TCACAGATGAGGTGGAGGTGTGGTGGCAATGGATCCCTTGGTTCTCTAGAGTCAGCCACCATCAAGCCCTaGAAGGAAGTGAAGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SQMRWRCGGNGSLGSLESATIKP*KEVKES Trigger: ACTCTCCTTCACTTCCTTCCAGGGCTTGATGGTGGC...TGACTCTAGAGAACCAAGGGATCCATTGCCACCACACCTCCACCTCATCTGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR TCA 90 bp | GCAGCAATTGTTTCTTCCTCTCTTCCTGCCACGGTGATTAAATTAGCAGGCTGTGCCAACAAGGATGGCTaGAGCGATGACCAAGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: AAIVSSSLPATVIKLAGCANKDG*SDDQGG Trigger: TCCGCCTTGGTCATCGCTTCAGCCATCCTTGTTGGC...ACAGCCTGCTAATTTAATCACCGTGGCAGGAAGAGAGGAAGAAACAATTGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGAACACCTCTGAGCATCATCTCCTCAACACCAGAGAGAGCTGCACGGTATGATGAAGACGGACAGTaGTCGGAGGATGAAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: QRTPLSIISSTPERAARYDEDGQ*SEDEGC Trigger: GCATCCTTCATCCTCCGAGCACTGTCCGTCTTCATC...ATACCGTGCAGCTCTCTCTGGTGTTGAGGAGATGATGCTCAGAGGTGTTCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR GCA 90 bp | GGTTGGCTTCAGTGGAAGAGTCTCTTCTGGATCATAGCCTCTGAAGTCAGAGGAGATGAAGACGGACAGTaGTCGGAGGATGAAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: GWLQWKSLFWIIASEVRGDEDGQ*SEDEGC Trigger: GCATCCTTCATCCTCCGAGCACTGTCCGTCTTCATC...TCCTCTGACTTCAGAGGCTATGATCCAGAAGAGACTCTTCCACTGAAGCCAACC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR GCA 90 bp | CTTCCTGCCACGGTGATTAAATTAGCAGGCTGTTCTCCTTGGAGGACATGTGTTCTCTGGATATTCAAGTaGTCCAGCCTCCAGCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPATVIKLAGCSPWRTCVLWIFK*SSLQRS Trigger: GGAGCGCTGGAGGCTGGAGCACTTGAATATCCAGAG...AACACATGTCCTCCAAGGAGAACAGCCTGCTAATTTAATCACCGTGGCAGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR CAA 72 bp | GGAATGTCAGCAATCCAGATGCACAGAGAAAGCCTCTaGTCGGGAGGAAGGCTGATTGATGCAGGTGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: GMSAIQMHRESL*SGGRLIDAGDN Trigger: GTTGTCACCTGCATCAATCAGCCTTCCTCCCGACAAGAGGCTTTCTCTGTGCATCTGGATTGCTGACATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| 3UTR CAA 72 bp | AACACAGGCACGCATAGTGCTCTTTGCCTTGAAGGGTaGAAACTCAGTCAGCTCAGGCATGAGCGAAGACGA | + |
|
Preference number: 4 (lower is better) Translates to: NTGTHSALCLEG*KLSQLRHERRR Trigger: TCGTCTTCGCTCATGCCTGAGCTGACTGAGTTTCAACCCTTCAAGGCAAAGAGCACTATGCGTGCCTGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| CDS-3UTR TCA 90 bp | GCAGCAATTGTTTCTTCCTCTCTTCCTGCCACGGTGATTAAATTAGCAGGCTGTTGCAGTGCAAGTGTCTaGAGCCAACAAGGATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AAIVSSSLPATVIKLAGCCSASV*SQQGWL Trigger: CAGCCATCCTTGTTGGCTTCAGACACTTGCACTGCA...ACAGCCTGCTAATTTAATCACCGTGGCAGGAAGAGAGGAAGAAACAATTGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR GCA 90 bp | TTCAACAAATTCCCCTCCCCAAGGAAACAACAGGATATCAGAAGAACAGGCAGAGCTGCCACGCAGTACTaGATGAGCAGGAACACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FNKFPSPRKQQDIRRTGRAATQY*MSRNTS Trigger: ACTGGTGTTCCTGCTCATGCAGTACTGCGTGGCAGC...TCTGCCTGTTCTTCTGATATCCTGTTGTTTCCTTGGGGAGGGGAATTTGTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR GCA 90 bp | GCAGCAATTGTTTCTTCCTCTCTTCCTGCCACGGTGATTAAATTAGCAGGCTGTCCAGTAGTAGTTGGCTaGCACGCAGTACTGCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: AAIVSSSLPATVIKLAGCPVVVG*HAVLHE Trigger: CTCATGCAGTACTGCGTGGCAGCCAACTACTACTGG...ACAGCCTGCTAATTTAATCACCGTGGCAGGAAGAGAGGAAGAAACAATTGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR TCA 90 bp | ATTAATGGTTCTAGAAAGTTCCCAGTTTATCCCATGCTTGTCTTTCCACTCTTCCCACGCAGTACTGCATaGGCAGGAACACCAGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: INGSRKFPVYPMLVFPLFPRSTA*AGTPVG Trigger: GCCGACTGGTGTTCCTGCTCATGCAGTACTGCGTGG...GAAGAGTGGAAAGACAAGCATGGGATAAACTGGGAACTTTCTAGAACCATTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| CDS-3UTR CCA 90 bp | TTCAACAAATTCCCCTCCCCAAGGAAACAACAGGATATCAGAAGAACAGGCAGAGCCACCATCAAGCCCTaGAAGGAAGTGAAGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FNKFPSPRKQQDIRRTGRATIKP*KEVKES Trigger: ACTCTCCTTCACTTCCTTCCAGGGCTTGATGGTGGC...TCTGCCTGTTCTTCTGATATCCTGTTGTTTCCTTGGGGAGGGGAATTTGTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR TCA 90 bp | GGCTTTAAACAGGAAGAAGTCCTCTTCATCTTAGCAGCAATTGTTTCTTCCTCTACAGTGCTCGGAGGATaGAGGATGCAAACAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GFKQEEVLFILAAIVSSSTVLGG*RMQTGS Trigger: TGAACCTGTTTGCATCCTTCATCCTCCGAGCACTGT...AGAGGAAGAAACAATTGCTGCTAAGATGAAGAGGACTTCTTCCTGTTTAAAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR TCA 90 bp | TTCAACAAATTCCCCTCCCCAAGGAAACAACAGGATATCAGAAGAACAGGCAGATCACAAAGGCAAAGATaGCTTCATGTGTCCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FNKFPSPRKQQDIRRTGRSQRQR*LHVSPE Trigger: TTCTGGGGACACATGAAGTCATCTTTGCCTTTGTGA...TCTGCCTGTTCTTCTGATATCCTGTTGTTTCCTTGGGGAGGGGAATTTGTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| 3UTR CAA 72 bp | ACTTTAAAACACACCCAGCTTCCTCTCATCACATCTTaGCCATGGAATGGGTCCGCCTTTAGTATTCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TLKHTQLPLITS*PWNGSAFSIPF Trigger: AAAGGGAATACTAAAGGCGGACCCATTCCATGGCAAAGATGTGATGAGAGGAAGCTGGGTGTGTTTTAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| 3UTR CAA 72 bp | GGTGCCTGGTCACCGTTTCATTTCTTTCAGTCACTTTaGTGTGCCTACCAGCATATTTCAAACAAAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: GAWSPFHFFQSL*CAYQHISNKEM Trigger: CATCTCTTTGTTTGAAATATGCTGGTAGGCACACAAAAGTGACTGAAAGAAATGAAACGGTGACCAGGCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| CDS GCA 90 bp | TCTCTGAGAGGGACACCGTGGTACCCTGAGGGCGGGGGCCGGCCCTaGCCACCGCCCCGAGCAGCAGGAGCGCCAGGCGCAGGAGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLRGTPWYPEGGGRP*PPPRAAGAPGAGGL Trigger: CAAGCCTCCTGCGCCTGGCGCTCCTGCTGCTCGGGGCGGTGGGCAGGGCCGGCCCCCGCCCTCAGGGTACCACGGTGTCCCTCTCAGAGA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS TCA 90 bp | ACGCTGGCACTGCCGCCGGTATTCTCTCCATTTCTGCACCGTCTCTaGGAGGGACACCGTGGTACCCTGAGGGCGGGGGCCGGCCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TLALPPVFSPFLHRL*EGHRGTLRAGAGPA Trigger: GGCAGGGCCGGCCCCCGCCCTCAGGGTACCACGGTGTCCCTCTCAGAGACGGTGCAGAAATGGAGAGAATACCGGCGGCAGTGCCAGCGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS CCA 90 bp | GGCCCAGGGCAGGTACCAGGGGCAGCTGACATTCACGAAGGAACCTaGGGGCCCATCCGGCCAGCAGGCATAGTCATCAAAGGTCCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GPGQVPGAADIHEGT*GPIRPAGIVIKGPV Trigger: AACCGGACCTTTGATGACTATGCCTGCTGGCCGGATGGGCCCCCAGGTTCCTTCGTGAATGTCAGCTGCCCCTGGTACCTGCCCTGGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS GCA 90 bp | AGGCCTGTGGCCAGGAGTGGCGCTTCCGTGAGGAAACGCTGGCACTaGCGCCGGTATTCTCTCCATTTCTGCACCGTCTCTGAGAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RPVARSGASVRKRWH*RRYSLHFCTVSERD Trigger: GTCCCTCTCAGAGACGGTGCAGAAATGGAGAGAATACCGGCGGCAGTGCCAGCGTTTCCTCACGGAAGCGCCACTCCTGGCCACAGGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS TCA 90 bp | AGGTCCGGTTGCAGAAGAGGCCTGTGGCCAGGAGTGGCGCTTCCGTaGGGAAACGCTGGCACTGCCGCCGGTATTCTCTCCATTTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RSGCRRGLWPGVALP*GNAGTAAGILSISA Trigger: TGCAGAAATGGAGAGAATACCGGCGGCAGTGCCAGCGTTTCCTCACGGAAGCGCCACTCCTGGCCACAGGCCTCTTCTGCAACCGGACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS CCA 90 bp | CAGAAGAGGCCTGTGGCCAGGAGTGGCGCTTCCGTGAGGAAACGCTaGCACTGCCGCCGGTATTCTCTCCATTTCTGCACCGTCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QKRPVARSGASVRKR*HCRRYSLHFCTVSE Trigger: CTCAGAGACGGTGCAGAAATGGAGAGAATACCGGCGGCAGTGCCAGCGTTTCCTCACGGAAGCGCCACTCCTGGCCACAGGCCTCTTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR CAA 90 bp | AACAGAACTGAGGGTCCACACCCCACATCTGGGCTTCTCACCGTGGGACCTGCCCTGCTGGTGGGACACTaGAGGGGCTTCATGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: NRTEGPHPTSGLLTVGPALLVGH*RGFMLQ Trigger: CTGCAGCATGAAGCCCCTCAAGTGTCCCACCAGCAG...GGCAGGTCCCACGGTGAGAAGCCCAGATGTGGGGTGTGGACCCTCAGTTCTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS GCA 90 bp | AGGGCAGGCTGGAGTTGTCCTTATGTAGCCAGAGACCCTCAGCTGTaGAGAACCGGTACACATGGCCTTGTAGCACACTACTGGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RAGWSCPYVARDPQL*RTGTHGLVAHYWPR Trigger: CCTGGGCCAGTAGTGTGCTACAAGGCCATGTGTACCGGTTCTGCACAGCTGAGGGTCTCTGGCTACATAAGGACAACTCCAGCCTGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS CCA 90 bp | ACGCTGCTGGTGGGACACTTGAGGGGCTTCATGCTGCAGTCTCTCTaGATATTCAAGTGCTCCAGCCTCCAGCGCTCCCAGCATTTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: TLLVGHLRGFMLQSL*IFKCSSLQRSQHFR Trigger: TCGGAAATGCTGGGAGCGCTGGAGGCTGGAGCACTTGAATATCCAGAGAGACTGCAGCATGAAGCCCCTCAAGTGTCCCACCAGCAGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR CAA 90 bp | CAGGTCTCTCATGGCCTCTTCTCGGAAGCCCCAATTCCACCCATCAGCAATTGCCCCATCCCACTGGTGTaGCTGGGCAGCCGTGCTATA | + |
|
Preference number: 5 (lower is better) Translates to: QVSHGLFSEAPIPPISNCPIPLV*LGSRAI Trigger: TATAGCACGGCTGCCCAGCAACACCAGTGGGATGGG...GCAATTGCTGATGGGTGGAATTGGGGCTTCCGAGAAGAGGCCATGAGAGACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR CAA 90 bp | ACAGAACTGAGGGTCCACACCCCACATCTGGGCTTCTCACCGTGGGACCTGCCCGTGCTATACATCCACTaGAGGGCAGCATCTTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: TELRVHTPHLGFSPWDLPVLYIH*RAASLM Trigger: CATCAAAGATGCTGCCCTCAAGTGGATGTATAGCAC...GGGCAGGTCCCACGGTGAGAAGCCCAGATGTGGGGTGTGGACCCTCAGTTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS GCA 90 bp | GGACACTTGAGGGGCTTCATGCTGCAGTCTCTCTGGATATTCAAGTaGTCCAGCCTCCAGCGCTCCCAGCATTTCCGAAACTCCATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GHLRGFMLQSLWIFK*SSLQRSQHFRNSIW Trigger: CCAGATGGAGTTTCGGAAATGCTGGGAGCGCTGGAGGCTGGAGCACTTGAATATCCAGAGAGACTGCAGCATGAAGCCCCTCAAGTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR CAA 90 bp | CCCCAAGGGTCTTGCGGCTTTAAACAGGAAGAAGTCCTCTTCATCTTAGCAGCACCCATCCCACTGGTGTaGCTGGGCAGCCGTGCTATA | + |
|
Preference number: 5 (lower is better) Translates to: PQGSCGFKQEEVLFILAAPIPLV*LGSRAI Trigger: TATAGCACGGCTGCCCAGCAACACCAGTGGGATGGG...TGCTGCTAAGATGAAGAGGACTTCTTCCTGTTTAAAGCCGCAAGACCCTTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR CAA 90 bp | CCTCCCCAGAATTCGGGGAGCACTGGAGATGGAAAGATGAGGTGCCTGGTCACCTTGGCAAGCCTGCATTaGATGTCAGTCTTGCACATG | + |
|
Preference number: 5 (lower is better) Translates to: PPQNSGSTGDGKMRCLVTLASLH*MSVLHM Trigger: CATGTGCAAGACTGACATCAAATGCAGGCTTGCCAA...GGTGACCAGGCACCTCATCTTTCCATCTCCAGTGCTCCCCGAATTCTGGGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114574.3 |
||
| CDS TCA 90 bp | GTAGTTCCTGGTGCAGTGCAAGTGTCTGAAGCCAACAAGGATGGCTaGAGCGATGACCAAGGCGGAGAAAGAAAGTGCGTACCCCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: VVPGAVQVSEANKDG*SDDQGGERKCVPHC Trigger: ACAGTGGGGTACGCACTTTCTTTCTCCGCCTTGGTCATCGCTTCAGCCATCCTTGTTGGCTTCAGACACTTGCACTGCACCAGGAACTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS CCA 90 bp | AGTCCAGCAGCCCTCGTCCTCATAGAGATACTTGACAATCCCCCATaGGATAACGAACAGCAGCGGAACTCCCCAGCCTATGCTCAGATA | + |
|
Preference number: 5 (lower is better) Translates to: SPAALVLIEILDNPP*DNEQQRNSPAYAQI Trigger: TATCTGAGCATAGGCTGGGGAGTTCCGCTGCTGTTCGTTATCCCATGGGGGATTGTCAAGTATCTCTATGAGGACGAGGGCTGCTGGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR CAA 90 bp | AGTCATAGACTCTGGTCACAGATGAGGTGGAGGTGTGGTGGCAATGGATCCCTTCAGGGCAGGCTGGAGTaGTCCTTATGTAGCCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SHRLWSQMRWRCGGNGSLQGRLE*SLCSQR Trigger: TCTCTGGCTACATAAGGACAACTCCAGCCTGCCCTG...AAGGGATCCATTGCCACCACACCTCCACCTCATCTGTGACCAGAGTCTATGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR CAA 90 bp | AGTGGCTTAAAGGGCCAGGCAAAGAACACCTCTGAGCATCATCTCCTCAACACCCAGGGCAGGCTGGAGTaGTCCTTATGTAGCCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SGLKGQAKNTSEHHLLNTQGRLE*SLCSQR Trigger: TCTCTGGCTACATAAGGACAACTCCAGCCTGCCCTG...GGTGTTGAGGAGATGATGCTCAGAGGTGTTCTTTGCCTGGCCCTTTAAGCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR CAA 90 bp | AACAGAACTGAGGGTCCACACCCCACATCTGGGCTTCTCACCGTGGGACCTGCCATCTGGACCTCATTGTaGACAAAGCAGTACAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: NRTEGPHPTSGLLTVGPAIWTSL*TKQYRI Trigger: TATCCTGTACTGCTTTGTCAACAATGAGGTCCAGAT...GGCAGGTCCCACGGTGAGAAGCCCAGATGTGGGGTGTGGACCCTCAGTTCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR CAA 90 bp | AAGGGCAGGTCTCTCATGGCCTCTTCTCGGAAGCCCCAATTCCACCCATCAGCATCCATCTGGACCTCATaGTTGACAAAGCAGTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: KGRSLMASSRKPQFHPSASIWTS*LTKQYR Trigger: CCTGTACTGCTTTGTCAACAATGAGGTCCAGATGGA...TGCTGATGGGTGGAATTGGGGCTTCCGAGAAGAGGCCATGAGAGACCTGCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR CAA 90 bp | CAGGTCTCTCATGGCCTCTTCTCGGAAGCCCCAATTCCACCCATCAGCAATTGCTCCATCTGGACCTCATaGTTGACAAAGCAGTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: QVSHGLFSEAPIPPISNCSIWTS*LTKQYR Trigger: CCTGTACTGCTTTGTCAACAATGAGGTCCAGATGGA...GCAATTGCTGATGGGTGGAATTGGGGCTTCCGAGAAGAGGCCATGAGAGACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR CAA 90 bp | TCACAGATGAGGTGGAGGTGTGGTGGCAATGGATCCCTTGGTTCTCTAGAGTCATTGAGGGCAGCATCTTaGATGAAGACGGACAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SQMRWRCGGNGSLGSLESLRAAS*MKTDSA Trigger: AGCACTGTCCGTCTTCATCAAAGATGCTGCCCTCAA...TGACTCTAGAGAACCAAGGGATCCATTGCCACCACACCTCCACCTCATCTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR CAA 90 bp | TCACAGATGAGGTGGAGGTGTGGTGGCAATGGATCCCTTGGTTCTCTAGAGTCATTGGCAAGCCTGCATTaGATGTCAGTCTTGCACATG | + |
|
Preference number: 5 (lower is better) Translates to: SQMRWRCGGNGSLGSLESLASLH*MSVLHM Trigger: CATGTGCAAGACTGACATCAAATGCAGGCTTGCCAA...TGACTCTAGAGAACCAAGGGATCCATTGCCACCACACCTCCACCTCATCTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR CAA 90 bp | GGCTTTAAACAGGAAGAAGTCCTCTTCATCTTAGCAGCAATTGTTTCTTCCTCTCTGCTGGTGGGACACTaGAGGGGCTTCATGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GFKQEEVLFILAAIVSSSLLVGH*RGFMLQ Trigger: CTGCAGCATGAAGCCCCTCAAGTGTCCCACCAGCAG...AGAGGAAGAAACAATTGCTGCTAAGATGAAGAGGACTTCTTCCTGTTTAAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR CAA 90 bp | AGTGGCTTAAAGGGCCAGGCAAAGAACACCTCTGAGCATCATCTCCTCAACACCATCTGGACCTCATTGTaGACAAAGCAGTACAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: SGLKGQAKNTSEHHLLNTIWTSL*TKQYRI Trigger: TATCCTGTACTGCTTTGTCAACAATGAGGTCCAGAT...GGTGTTGAGGAGATGATGCTCAGAGGTGTTCTTTGCCTGGCCCTTTAAGCCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS-3UTR CAA 90 bp | TTCAACAAATTCCCCTCCCCAAGGAAACAACAGGATATCAGAAGAACAGGCAGATTGAGGGCAGCATCTTaGATGAAGACGGACAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FNKFPSPRKQQDIRRTGRLRAAS*MKTDSA Trigger: AGCACTGTCCGTCTTCATCAAAGATGCTGCCCTCAA...TCTGCCTGTTCTTCTGATATCCTGTTGTTTCCTTGGGGAGGGGAATTTGTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS GCA 72 bp | GGGACACCGTGGTACCCTGAGGGCGGGGGCCGGCCCTaGCCACCGCCCCGAGCAGCAGGAGCGCCAGGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: GTPWYPEGGGRP*PPPRAAGAPGA Trigger: TGCGCCTGGCGCTCCTGCTGCTCGGGGCGGTGGGCAGGGCCGGCCCCCGCCCTCAGGGTACCACGGTGTCCC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS TCA 72 bp | CTGCCGCCGGTATTCTCTCCATTTCTGCACCGTCTCTaGGAGGGACACCGTGGTACCCTGAGGGCGGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LPPVFSPFLHRL*EGHRGTLRAGA Trigger: GGCCCCCGCCCTCAGGGTACCACGGTGTCCCTCTCAGAGACGGTGCAGAAATGGAGAGAATACCGGCGGCAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS CCA 72 bp | AAAGGTCCGGTTGCAGAAGAGGCCTGTGGCCAGGAGTaGCGCTTCCGTGAGGAAACGCTGGCACTGCCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: KGPVAEEACGQE*RFREETLALPP Trigger: CGGCGGCAGTGCCAGCGTTTCCTCACGGAAGCGCCACTCCTGGCCACAGGCCTCTTCTGCAACCGGACCTTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS TCA 72 bp | TGCAGAAGAGGCCTGTGGCCAGGAGTGGCGCTTCCGTaGGGAAACGCTGGCACTGCCGCCGGTATTCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CRRGLWPGVALP*GNAGTAAGILS Trigger: GGAGAGAATACCGGCGGCAGTGCCAGCGTTTCCTCACGGAAGCGCCACTCCTGGCCACAGGCCTCTTCTGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS GCA 72 bp | CATCCGGCCAGCAGGCATAGTCATCAAAGGTCCGGTTaGAGAAGAGGCCTGTGGCCAGGAGTGGCGCTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: HPASRHSHQRSG*RRGLWPGVALP Trigger: CGGAAGCGCCACTCCTGGCCACAGGCCTCTTCTGCAACCGGACCTTTGATGACTATGCCTGCTGGCCGGATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS CCA 72 bp | CCTGTGGCCAGGAGTGGCGCTTCCGTGAGGAAACGCTaGCACTGCCGCCGGTATTCTCTCCATTTCTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: PVARSGASVRKR*HCRRYSLHFCT Trigger: GGTGCAGAAATGGAGAGAATACCGGCGGCAGTGCCAGCGTTTCCTCACGGAAGCGCCACTCCTGGCCACAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS GCA 72 bp | GCCAGGAGTGGCGCTTCCGTGAGGAAACGCTGGCACTaGCGCCGGTATTCTCTCCATTTCTGCACCGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ARSGASVRKRWH*RRYSLHFCTVS Trigger: AGAGACGGTGCAGAAATGGAGAGAATACCGGCGGCAGTGCCAGCGTTTCCTCACGGAAGCGCCACTCCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS CAA 90 bp | CTGCTGCCCACTGTGGCCCCACTGCTGACGCTGCTGGTGGGACACTaGAGGGGCTTCATGCTGCAGTCTCTCTGGATATTCAAGTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LLPTVAPLLTLLVGH*RGFMLQSLWIFKCS Trigger: GGAGCACTTGAATATCCAGAGAGACTGCAGCATGAAGCCCCTCAAGTGTCCCACCAGCAGCGTCAGCAGTGGGGCCACAGTGGGCAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS CCA 72 bp | CAGGTACCAGGGGCAGCTGACATTCACGAAGGAACCTaGGGGCCCATCCGGCCAGCAGGCATAGTCATCAAA | + |
|
Preference number: 6 (lower is better) Translates to: QVPGAADIHEGT*GPIRPAGIVIK Trigger: TTTGATGACTATGCCTGCTGGCCGGATGGGCCCCCAGGTTCCTTCGTGAATGTCAGCTGCCCCTGGTACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS CCA 72 bp | AGCCAGAGACCCTCAGCTGTGCAGAACCGGTACACATaGCCTTGTAGCACACTACTGGCCCAGGGCAGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: SQRPSAVQNRYT*PCSTLLAQGRY Trigger: GTACCTGCCCTGGGCCAGTAGTGTGCTACAAGGCCATGTGTACCGGTTCTGCACAGCTGAGGGTCTCTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS CAA 72 bp | TCACACTCCGACAGGTCCCTCCAGGGCAGGCTGGAGTaGTCCTTATGTAGCCAGAGACCCTCAGCTGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SHSDRSLQGRLE*SLCSQRPSAVQ Trigger: CTGCACAGCTGAGGGTCTCTGGCTACATAAGGACAACTCCAGCCTGCCCTGGAGGGACCTGTCGGAGTGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS TCA 72 bp | GCAGCGGAACTCCCCAGCCTATGCTCAGATACAGCTTaGAGATGCGCTGCTCCGAGAACACCGAGAAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: AAELPSLCSDTA*RCAAPRTPRRP Trigger: TGGCCTTCTCGGTGTTCTCGGAGCAGCGCATCTTCAAGCTGTATCTGAGCATAGGCTGGGGAGTTCCGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS CCA 72 bp | ACTCTTCACACTCCGACAGGTCCCTCCAGGGCAGGCTaGAGTTGTCCTTATGTAGCCAGAGACCCTCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TLHTPTGPSRAG*SCPYVARDPQL Trigger: CAGCTGAGGGTCTCTGGCTACATAAGGACAACTCCAGCCTGCCCTGGAGGGACCTGTCGGAGTGTGAAGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS CCA 72 bp | GTGGGACACTTGAGGGGCTTCATGCTGCAGTCTCTCTaGATATTCAAGTGCTCCAGCCTCCAGCGCTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VGHLRGFMLQSL*IFKCSSLQRSQ Trigger: CTGGGAGCGCTGGAGGCTGGAGCACTTGAATATCCAGAGAGACTGCAGCATGAAGCCCCTCAAGTGTCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS CAA 72 bp | AGAGTCCTGATAGGAGAGGAGCCCATCCCACTGGTGTaGCTGGGCAGCCGTGCTATACATCCACTTGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RVLIGEEPIPLV*LGSRAIHPLEG Trigger: GCCCTCAAGTGGATGTATAGCACGGCTGCCCAGCAACACCAGTGGGATGGGCTCCTCTCCTATCAGGACTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS CAA 72 bp | AGCAGCGGAACTCCCCAGCCTATGCTCAGATACAGCTaGAAGATGCGCTGCTCCGAGAACACCGAGAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSGTPQPMLRYS*KMRCSENTEKA Trigger: GGCCTTCTCGGTGTTCTCGGAGCAGCGCATCTTCAAGCTGTATCTGAGCATAGGCTGGGGAGTTCCGCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS CAA 72 bp | ACTGTGGCCCCACTGCTGACGCTGCTGGTGGGACACTaGAGGGGCTTCATGCTGCAGTCTCTCTGGATATTC | + |
|
Preference number: 6 (lower is better) Translates to: TVAPLLTLLVGH*RGFMLQSLWIF Trigger: GAATATCCAGAGAGACTGCAGCATGAAGCCCCTCAAGTGTCCCACCAGCAGCGTCAGCAGTGGGGCCACAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS CAA 90 bp | TTAGACTCTTCACACTCCGACAGGTCCCTCCAGGGCAGGCTGGAGTaGTCCTTATGTAGCCAGAGACCCTCAGCTGTGCAGAACCGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: LDSSHSDRSLQGRLE*SLCSQRPSAVQNRY Trigger: GTACCGGTTCTGCACAGCTGAGGGTCTCTGGCTACATAAGGACAACTCCAGCCTGCCCTGGAGGGACCTGTCGGAGTGTGAAGAGTCTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS TCA 72 bp | GCAACCAGTAGTAGTTGGCTGCCACGCAGTACTGCATaGGCAGGAACACCAGTCGGCAGCCTAGAGAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ATSSSWLPRSTA*AGTPVGSLESP Trigger: AGGACTCTCTAGGCTGCCGACTGGTGTTCCTGCTCATGCAGTACTGCGTGGCAGCCAACTACTACTGGTTGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS CAA 90 bp | ATAACGAACAGCAGCGGAACTCCCCAGCCTATGCTCAGATACAGCTaGAAGATGCGCTGCTCCGAGAACACCGAGAAGGCCAGCAGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: ITNSSGTPQPMLRYS*KMRCSENTEKASSV Trigger: CACACTGCTGGCCTTCTCGGTGTTCTCGGAGCAGCGCATCTTCAAGCTGTATCTGAGCATAGGCTGGGGAGTTCCGCTGCTGTTCGTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS GCA 72 bp | CCCCAGCCTATGCTCAGATACAGCTTGAAGATGCGCTaGTCCGAGAACACCGAGAAGGCCAGCAGTGTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: PQPMLRYSLKMR*SENTEKASSVY Trigger: ATACACACTGCTGGCCTTCTCGGTGTTCTCGGAGCAGCGCATCTTCAAGCTGTATCTGAGCATAGGCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS GCA 72 bp | AGGGGCTTCATGCTGCAGTCTCTCTGGATATTCAAGTaGTCCAGCCTCCAGCGCTCCCAGCATTTCCGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: RGFMLQSLWIFK*SSLQRSQHFRN Trigger: GTTTCGGAAATGCTGGGAGCGCTGGAGGCTGGAGCACTTGAATATCCAGAGAGACTGCAGCATGAAGCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS CCA 72 bp | GCCCTCGTCCTCATAGAGATACTTGACAATCCCCCATaGGATAACGAACAGCAGCGGAACTCCCCAGCCTAT | + |
|
Preference number: 6 (lower is better) Translates to: ALVLIEILDNPP*DNEQQRNSPAY Trigger: ATAGGCTGGGGAGTTCCGCTGCTGTTCGTTATCCCATGGGGGATTGTCAAGTATCTCTATGAGGACGAGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS TCA 72 bp | GGTGCAGTGCAAGTGTCTGAAGCCAACAAGGATGGCTaGAGCGATGACCAAGGCGGAGAAAGAAAGTGCGTA | + |
|
Preference number: 6 (lower is better) Translates to: GAVQVSEANKDG*SDDQGGERKCV Trigger: TACGCACTTTCTTTCTCCGCCTTGGTCATCGCTTCAGCCATCCTTGTTGGCTTCAGACACTTGCACTGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS GCA 72 bp | TGGAGTTGTCCTTATGTAGCCAGAGACCCTCAGCTGTaGAGAACCGGTACACATGGCCTTGTAGCACACTAC | + |
|
Preference number: 6 (lower is better) Translates to: WSCPYVARDPQL*RTGTHGLVAHY Trigger: GTAGTGTGCTACAAGGCCATGTGTACCGGTTCTGCACAGCTGAGGGTCTCTGGCTACATAAGGACAACTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS CCA 72 bp | AGCCTCCAGCGCTCCCAGCATTTCCGAAACTCCATCTaGACCTCATTGTTGACAAAGCAGTACAGGATAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SLQRSQHFRNSI*TSLLTKQYRIA Trigger: GGCTATCCTGTACTGCTTTGTCAACAATGAGGTCCAGATGGAGTTTCGGAAATGCTGGGAGCGCTGGAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS CAA 90 bp | ACCATCAAGCCCTGGAAGGAAGTGAAGGAGAGTTCTGTGAACAGCTaGATGAAGCGTAGGGTTCCTCGGGCGTGTTCGTCCATCACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: TIKPWKEVKESSVNS*MKRRVPRACSSITK Trigger: CTTTGTGATGGACGAACACGCCCGAGGAACCCTACGCTTCATCAAGCTGTTCACAGAACTCTCCTTCACTTCCTTCCAGGGCTTGATGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS CAA 90 bp | AGCCTGCATTTGATGTCAGTCTTGCACATGAGATTAGCCTTCAGTTaGGAGACCACTATGCAGATGACACGGATGAAGATAAGAAAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SLHLMSVLHMRLAFS*ETTMQMTRMKIRKL Trigger: CAACTTTCTTATCTTCATCCGTGTCATCTGCATAGTGGTCTCCAAACTGAAGGCTAATCTCATGTGCAAGACTGACATCAAATGCAGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||
| CDS CAA 72 bp | TTGATGTCAGTCTTGCACATGAGATTAGCCTTCAGTTaGGAGACCACTATGCAGATGACACGGATGAAGATA | + |
|
Preference number: 6 (lower is better) Translates to: LMSVLHMRLAFS*ETTMQMTRMKI Trigger: TATCTTCATCCGTGTCATCTGCATAGTGGTCTCCAAACTGAAGGCTAATCTCATGTGCAAGACTGACATCAA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114574.3 ENSMUST00000236038.2 |
||