Pregenerated sensors for GLOD5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031163Ensembl transcript IDs: ENSMUST00000033503.3
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTTTATTGGAGTAGCTTGAATGGAGGCTTTCTAGACACAAACGTTTaGACCATAAACCTGTTGCCGAAGTTCTCAGTTCTTCGAGGTCTC | + |
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Preference number: 1 (lower is better) Translates to: VYWSSLNGGFLDTNV*TINLLPKFSVLRGL Trigger: GAGACCTCGAAGAACTGAGAACTTCGGCAACAGGTTTATGGTGCAAACGTTTGTGTCTAGAAAGCCTCCATTCAAGCTACTCCAATAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033503.3 |
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| 3UTR GCA 72 bp | AGTAGCTTGAATGGAGGCTTTCTAGACACAAACGTTTaGACCATAAACCTGTTGCCGAAGTTCTCAGTTCTT | + |
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Preference number: 3 (lower is better) Translates to: SSLNGGFLDTNV*TINLLPKFSVL Trigger: AAGAACTGAGAACTTCGGCAACAGGTTTATGGTGCAAACGTTTGTGTCTAGAAAGCCTCCATTCAAGCTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033503.3 |
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| CDS-3UTR TCA 90 bp | TCTCAGTTCTTCGAGGTCTCTGGGATTTGTAGGAAATTAGGTAAAATGACATTTGAGCCTGGAACAGGGTaGGCTGCTTTGGGGTCAAAT | + |
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Preference number: 4 (lower is better) Translates to: SQFFEVSGICRKLGKMTFEPGTG*AALGSN Trigger: ATTTGACCCCAAAGCAGCTCACCCTGTTCCAGGCTC...AAATGTCATTTTACCTAATTTCCTACAAATCCCAGAGACCTCGAAGAACTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033503.3 |
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| CDS-3UTR TCA 90 bp | TCTCAGTTCTTCGAGGTCTCTGGGATTTGTAGGAAATTAGGTAAAATGACATTTCCAGGGGTGCTTCTGTaGTCAAACAAACATCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SQFFEVSGICRKLGKMTFPGVLL*SNKHPG Trigger: CCCTGGATGTTTGTTTGATCACAGAAGCACCCCTGG...AAATGTCATTTTACCTAATTTCCTACAAATCCCAGAGACCTCGAAGAACTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033503.3 |
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| CDS-3UTR CCA 90 bp | TCTCAGTTCTTCGAGGTCTCTGGGATTTGTAGGAAATTAGGTAAAATGACATTTAACATCCAGGGAGCCTaGAACAGGGTGAGCTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: SQFFEVSGICRKLGKMTFNIQGA*NRVSCF Trigger: AAAGCAGCTCACCCTGTTCCAGGCTCCCTGGATGTT...AAATGTCATTTTACCTAATTTCCTACAAATCCCAGAGACCTCGAAGAACTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033503.3 |
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| CDS-3UTR TCA 90 bp | TCTCAGTTCTTCGAGGTCTCTGGGATTTGTAGGAAATTAGGTAAAATGACATTTCCTTTGCTCCTGTTCTaGATACTGGGCCCTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SQFFEVSGICRKLGKMTFPLLLF*ILGPLQ Trigger: TTGAAGAGGGCCCAGTATTCAGAACAGGAGCAAAGG...AAATGTCATTTTACCTAATTTCCTACAAATCCCAGAGACCTCGAAGAACTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033503.3 |
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| CDS-3UTR GCA 90 bp | TCTCAGTTCTTCGAGGTCTCTGGGATTTGTAGGAAATTAGGTAAAATGACATTTCACCTCCTCCAGGGGTaGTTCTGTGATCAAACAAAC | + |
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Preference number: 4 (lower is better) Translates to: SQFFEVSGICRKLGKMTFHLLQG*FCDQTN Trigger: GTTTGTTTGATCACAGAAGCACCCCTGGAGGAGGTG...AAATGTCATTTTACCTAATTTCCTACAAATCCCAGAGACCTCGAAGAACTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033503.3 |
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| CDS-3UTR CCA 90 bp | TCTCAGTTCTTCGAGGTCTCTGGGATTTGTAGGAAATTAGGTAAAATGACATTTCAGGGTGAGCTGCTTTaGGGTCAAATTCCTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQFFEVSGICRKLGKMTFQGELL*GQIPFP Trigger: TGGGAAAGGAATTTGACCCCAAAGCAGCTCACCCTG...AAATGTCATTTTACCTAATTTCCTACAAATCCCAGAGACCTCGAAGAACTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033503.3 |
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| CDS-3UTR GCA 90 bp | TCTCAGTTCTTCGAGGTCTCTGGGATTTGTAGGAAATTAGGTAAAATGACATTTTGGAACAGGGTGAGCTaGTTTGGGGTCAAATTCCTT | + |
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Preference number: 4 (lower is better) Translates to: SQFFEVSGICRKLGKMTFWNRVS*FGVKFL Trigger: AAGGAATTTGACCCCAAAGCAGCTCACCCTGTTCCA...AAATGTCATTTTACCTAATTTCCTACAAATCCCAGAGACCTCGAAGAACTGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033503.3 |
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| CDS-3UTR CCA 90 bp | TCTCAGTTCTTCGAGGTCTCTGGGATTTGTAGGAAATTAGGTAAAATGACATTTCTGGGCCCTCTTCAATaGGGACATCAAAAGCCTTTA | + |
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Preference number: 4 (lower is better) Translates to: SQFFEVSGICRKLGKMTFLGPLQ*GHQKPL Trigger: TAAAGGCTTTTGATGTCCCCATTGAAGAGGGCCCAG...AAATGTCATTTTACCTAATTTCCTACAAATCCCAGAGACCTCGAAGAACTGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033503.3 |
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| CDS-3UTR GCA 90 bp | TCTCAGTTCTTCGAGGTCTCTGGGATTTGTAGGAAATTAGGTAAAATGACATTTGTCTCCGAAACACAATaGTTTCCGGTTTCCCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: SQFFEVSGICRKLGKMTFVSETQ*FPVSLE Trigger: TTCAAGGGAAACCGGAAAGCATTGTGTTTCGGAGAC...AAATGTCATTTTACCTAATTTCCTACAAATCCCAGAGACCTCGAAGAACTGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033503.3 |
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| CDS-3UTR CCA 90 bp | TCTCAGTTCTTCGAGGTCTCTGGGATTTGTAGGAAATTAGGTAAAATGACATTTCCATGCCCAGGATCTTaGAATAAAACATGGTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: SQFFEVSGICRKLGKMTFPCPGS*NKTWWC Trigger: ACACCACCATGTTTTATTCCAAGATCCTGGGCATGG...AAATGTCATTTTACCTAATTTCCTACAAATCCCAGAGACCTCGAAGAACTGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033503.3 |
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| CDS-3UTR TCA 90 bp | TCTCAGTTCTTCGAGGTCTCTGGGATTTGTAGGAAATTAGGTAAAATGACATTTCTGCTTCTCCATAACTaGCTTTCAGATGTTGGATCA | + |
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Preference number: 4 (lower is better) Translates to: SQFFEVSGICRKLGKMTFLLLHN*LSDVGS Trigger: TGATCCAACATCTGAAAGTCAGTTATGGAGAAGCAG...AAATGTCATTTTACCTAATTTCCTACAAATCCCAGAGACCTCGAAGAACTGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033503.3 |
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| CDS-3UTR CCA 90 bp | TCTCAGTTCTTCGAGGTCTCTGGGATTTGTAGGAAATTAGGTAAAATGACATTTACAGTCATCACAATGTaGTCAAGTCTACAGATAAGA | + |
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Preference number: 4 (lower is better) Translates to: SQFFEVSGICRKLGKMTFTVITM*SSLQIR Trigger: TCTTATCTGTAGACTTGACCACATTGTGATGACTGT...AAATGTCATTTTACCTAATTTCCTACAAATCCCAGAGACCTCGAAGAACTGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033503.3 |
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| CDS-3UTR CCA 90 bp | TCTCAGTTCTTCGAGGTCTCTGGGATTTGTAGGAAATTAGGTAAAATGACATTTTCTTGGAATAAAACATaGTGGTGTCTTCAATGTTCT | + |
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Preference number: 4 (lower is better) Translates to: SQFFEVSGICRKLGKMTFSWNKT*WCLQCS Trigger: AGAACATTGAAGACACCACCATGTTTTATTCCAAGA...AAATGTCATTTTACCTAATTTCCTACAAATCCCAGAGACCTCGAAGAACTGAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033503.3 |
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| CDS TCA 90 bp | CAAAAGCCTTTAGGCGCTCGATCACCTCCTCCAGGGGTGCTTCTGTaGTCAAACAAACATCCAGGGAGCCTGGAACAGGGTGAGCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: QKPLGARSPPPGVLL*SNKHPGSLEQGELL Trigger: AAGCAGCTCACCCTGTTCCAGGCTCCCTGGATGTTTGTTTGATCACAGAAGCACCCCTGGAGGAGGTGATCGAGCGCCTAAAGGCTTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033503.3 |
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| CDS CCA 90 bp | GCTTTGGGGTCAAATTCCTTTCCCACCTCGTGTAAGTTAAATTTTTaGTCTCCGAAACACAATGCTTTCCGGTTTCCCTTGAAAGTAGTG | + |
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Preference number: 5 (lower is better) Translates to: ALGSNSFPTSCKLNF*SPKHNAFRFPLKVV Trigger: CACTACTTTCAAGGGAAACCGGAAAGCATTGTGTTTCGGAGACCAAAAATTTAACTTACACGAGGTGGGAAAGGAATTTGACCCCAAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033503.3 |
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| CDS TCA 72 bp | TTAGGCGCTCGATCACCTCCTCCAGGGGTGCTTCTGTaGTCAAACAAACATCCAGGGAGCCTGGAACAGGGT | + |
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Preference number: 6 (lower is better) Translates to: LGARSPPPGVLL*SNKHPGSLEQG Trigger: ACCCTGTTCCAGGCTCCCTGGATGTTTGTTTGATCACAGAAGCACCCCTGGAGGAGGTGATCGAGCGCCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033503.3 |
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| CDS CCA 72 bp | GGGTGCTTCTGTGATCAAACAAACATCCAGGGAGCCTaGAACAGGGTGAGCTGCTTTGGGGTCAAATTCCTT | + |
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Preference number: 6 (lower is better) Translates to: GCFCDQTNIQGA*NRVSCFGVKFL Trigger: AAGGAATTTGACCCCAAAGCAGCTCACCCTGTTCCAGGCTCCCTGGATGTTTGTTTGATCACAGAAGCACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033503.3 |
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| CDS CCA 72 bp | GTGGTGTCTTCAATGTTCTTTACAGTCATCACAATGTaGTCAAGTCTACAGATAAGACACGGGGAAGGGATC | + |
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Preference number: 6 (lower is better) Translates to: VVSSMFFTVITM*SSLQIRHGEGI Trigger: GATCCCTTCCCCGTGTCTTATCTGTAGACTTGACCACATTGTGATGACTGTAAAGAACATTGAAGACACCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033503.3 |
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| CDS CCA 72 bp | TCAAATTCCTTTCCCACCTCGTGTAAGTTAAATTTTTaGTCTCCGAAACACAATGCTTTCCGGTTTCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: SNSFPTSCKLNF*SPKHNAFRFPL Trigger: CAAGGGAAACCGGAAAGCATTGTGTTTCGGAGACCAAAAATTTAACTTACACGAGGTGGGAAAGGAATTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033503.3 |
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