RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GLO1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024026

Ensembl transcript IDs: ENSMUST00000024823.14, ENSMUST00000167624.2, ENSMUST00000235171.2, ENSMUST00000235547.2, ENSMUST00000236335.2, ENSMUST00000236619.2, ENSMUST00000236995.2

Found 231 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCTGTAGACCAGGCTGGCCTCAAACTCAGAAATCCACCTGCCTCTaGCTCCCAATTGCTGGGATTAAAGGCGTTCGCCACCACCGCCCG +
Preference number: 1 (lower is better)
Translates to: LCRPGWPQTQKSTCL*LPIAGIKGVRHHRP
Trigger: CGGGCGGTGGTGGCGAACGCCTTTAATCCCAGCAATTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 90 bp CTTCCCGGGGCAGTGCTCATTTACCAGGGATCCCATTCAGTGTCCTaGTCTGGCTCCTACCCACCCGCAGTTGGTGCTTCCTGTTCCAAC +
Preference number: 1 (lower is better)
Translates to: LPGAVLIYQGSHSVS*SGSYPPAVGASCSN
Trigger: GTTGGAACAGGAAGCACCAACTGCGGGTGGGTAGGAGCCAGAGCAGGACACTGAATGGGATCCCTGGTAAATGAGCACTGCCCCGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 90 bp TGGTTCCTGGGATTTGAACTCCAGACCTTCGGAAGAGCAGTCAGGTaGTCTGACCCACTGAGCCGTCTCACCAGCCCCACCACTTGGGAA +
Preference number: 1 (lower is better)
Translates to: WFLGFELQTFGRAVR*SDPLSRLTSPTTWE
Trigger: TTCCCAAGTGGTGGGGCTGGTGAGACGGCTCAGTGGGTCAGAGCACCTGACTGCTCTTCCGAAGGTCTGGAGTTCAAATCCCAGGAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 90 bp TTCAATGGGCAACTTCCCCTACTGTGTGCTCCAGGCTATCTGGCCTaGCAGCTTCCGGGCCATTCACCTGTCTCTACCTCCCATCTCACC +
Preference number: 1 (lower is better)
Translates to: FNGQLPLLCAPGYLA*QLPGHSPVSTSHLT
Trigger: GGTGAGATGGGAGGTAGAGACAGGTGAATGGCCCGGAAGCTGGCAGGCCAGATAGCCTGGAGCACACAGTAGGGGAAGTTGCCCATTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CCA 90 bp CGGGGCAGTGCTCATTTACCAGGGATCCCATTCAGTGTCCTGCTCTaGCTCCTACCCACCCGCAGTTGGTGCTTCCTGTTCCAACAACTC +
Preference number: 1 (lower is better)
Translates to: RGSAHLPGIPFSVLL*LLPTRSWCFLFQQL
Trigger: GAGTTGTTGGAACAGGAAGCACCAACTGCGGGTGGGTAGGAGCCAGAGCAGGACACTGAATGGGATCCCTGGTAAATGAGCACTGCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 90 bp CCCCCAGCCTGTTCTTCCCACCGCTACTTGCCAGGTAAGTGTATTTaGAAGTGCACTGTCCCAACTCCTGCCAAGGCCTGGCCACATACA +
Preference number: 1 (lower is better)
Translates to: PPACSSHRYLPGKCI*KCTVPTPAKAWPHT
Trigger: TGTATGTGGCCAGGCCTTGGCAGGAGTTGGGACAGTGCACTTGCAAATACACTTACCTGGCAAGTAGCGGTGGGAAGAACAGGCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 90 bp AGCAGCAAGGTCCCCAACCCCCAGCCTGTTCTTCCCACCGCTACTTaGCAGGTAAGTGTATTTGCAAGTGCACTGTCCCAACTCCTGCCA +
Preference number: 1 (lower is better)
Translates to: SSKVPNPQPVLPTAT*QVSVFASALSQLLP
Trigger: TGGCAGGAGTTGGGACAGTGCACTTGCAAATACACTTACCTGGCAAGTAGCGGTGGGAAGAACAGGCTGGGGGTTGGGGACCTTGCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 90 bp TGTCCACAAGTCAAGAGGACCCTTGCCAGACACTGCAAAGGCTGCTaGTTCATAAGAAGTTGCAGCCTGCCGGGCGGTATTGGCGCACAC +
Preference number: 1 (lower is better)
Translates to: CPQVKRTLARHCKGC*FIRSCSLPGGIGAH
Trigger: GTGTGCGCCAATACCGCCCGGCAGGCTGCAACTTCTTATGAAGCAGCAGCCTTTGCAGTGTCTGGCAAGGGTCCTCTTGACTTGTGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 90 bp TCTGCCAGGAAGAAAGACTGCCCCTGGTATGACTTCCCGGGGCAGTaGTCATTTACCAGGGATCCCATTCAGTGTCCTGCTCTGGCTCCT +
Preference number: 1 (lower is better)
Translates to: SARKKDCPWYDFPGQ*SFTRDPIQCPALAP
Trigger: AGGAGCCAGAGCAGGACACTGAATGGGATCCCTGGTAAATGAGCACTGCCCCGGGAAGTCATACCAGGGGCAGTCTTTCTTCCTGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CCA 90 bp CAAAGGCTGCTGCTTCATAAGAAGTTGCAGCCTGCCGGGCGGTATTaGCGCACACCTTTAATCCCAGCACTCAAGAGGCAGAGGCAGGCT +
Preference number: 1 (lower is better)
Translates to: QRLLLHKKLQPAGRY*RTPLIPALKRQRQA
Trigger: AGCCTGCCTCTGCCTCTTGAGTGCTGGGATTAAAGGTGTGCGCCAATACCGCCCGGCAGGCTGCAACTTCTTATGAAGCAGCAGCCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CCA 90 bp TGTCTTGTTAACTCACGGCCCATATCCATTCAAGCAGCTAGACCATaGGCCCCGCAGTGCCAGGCAGGAACCTTGAAGCTTTGGCCTGGG +
Preference number: 1 (lower is better)
Translates to: CLVNSRPISIQAARP*APQCQAGTLKLWPG
Trigger: CCCAGGCCAAAGCTTCAAGGTTCCTGCCTGGCACTGCGGGGCCCATGGTCTAGCTGCTTGAATGGATATGGGCCGTGAGTTAACAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CCA 90 bp GTCAGGTGCTCTGACCCACTGAGCCGTCTCACCAGCCCCACCACTTaGGAACTTGATAGACATGCTTATCATAAGGCTGTGGTGGTCAGG +
Preference number: 1 (lower is better)
Translates to: VRCSDPLSRLTSPTT*ELDRHAYHKAVVVR
Trigger: CCTGACCACCACAGCCTTATGATAAGCATGTCTATCAAGTTCCCAAGTGGTGGGGCTGGTGAGACGGCTCAGTGGGTCAGAGCACCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR TCA 90 bp GAGAATCTGCTGAGTGTCTGCCAGGAAGAAAGACTGCCCCTGGTATaGCTTCCCGGGGCAGTGCTCATTTACCAGGGATCCCATTCAGTG +
Preference number: 1 (lower is better)
Translates to: ENLLSVCQEERLPLV*LPGAVLIYQGSHSV
Trigger: CACTGAATGGGATCCCTGGTAAATGAGCACTGCCCCGGGAAGTCATACCAGGGGCAGTCTTTCTTCCTGGCAGACACTCAGCAGATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 90 bp CAGGAACGGCAATCCCAATGTGACCAAATCCACGAGGGTCCGAGTTaGCGTTGTGGTAACTCTGAGTCTCGTCATCTTCAGTGCCCCAGT +
Preference number: 1 (lower is better)
Translates to: QERQSQCDQIHEGPS*RCGNSESRHLQCPS
Trigger: ACTGGGGCACTGAAGATGACGAGACTCAGAGTTACCACAACGGCAACTCGGACCCTCGTGGATTTGGTCACATTGGGATTGCCGTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236619.2
3UTR CCA 90 bp CGTCTGTCGATCTGGAGGGGCAGAGGCTTGCTTGTCTTTGGCTTCTaGACACAGCTTGAGGAAGTTAGCAGTACACTTGGGGAGTTAGGG +
Preference number: 1 (lower is better)
Translates to: RLSIWRGRGLLVFGF*TQLEEVSSTLGELG
Trigger: CCCTAACTCCCCAAGTGTACTGCTAACTTCCTCAAGCTGTGTCCAGAAGCCAAAGACAAGCAAGCCTCTGCCCCTCCAGATCGACAGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 90 bp GCCTGTTCTTCCCACCGCTACTTGCCAGGTAAGTGTATTTGCAAGTaGACTGTCCCAACTCCTGCCAAGGCCTGGCCACATACATGCTTT +
Preference number: 1 (lower is better)
Translates to: ACSSHRYLPGKCICK*TVPTPAKAWPHTCF
Trigger: AAAGCATGTATGTGGCCAGGCCTTGGCAGGAGTTGGGACAGTGCACTTGCAAATACACTTACCTGGCAAGTAGCGGTGGGAAGAACAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CCA 90 bp GCGTCAGATCTCGTTACGGATGGTTGTGAACCACCATGTGGTTCCTaGGATTTGAACTCCAGACCTTCGGAAGAGCAGTCAGGTGCTCTG +
Preference number: 1 (lower is better)
Translates to: ASDLVTDGCEPPCGS*DLNSRPSEEQSGAL
Trigger: CAGAGCACCTGACTGCTCTTCCGAAGGTCTGGAGTTCAAATCCCAGGAACCACATGGTGGTTCACAACCATCCGTAACGAGATCTGACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR TCA 90 bp CCAACAACTCTAGGTGCTGCTAACCCACAGATTCGTGGAGAACATTaGCAACTAGGGCTACCAGCCTCCAAGTGCAGTGCAGTGACTGAG +
Preference number: 1 (lower is better)
Translates to: PTTLGAANPQIRGEH*QLGLPASKCSAVTE
Trigger: CTCAGTCACTGCACTGCACTTGGAGGCTGGTAGCCCTAGTTGTCAATGTTCTCCACGAATCTGTGGGTTAGCAGCACCTAGAGTTGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 90 bp TTCTCTGGAACTAGAATCCTGGATGGTTGCAAACCACAGTGTGGGTaGTGGGAACCAAGCACGGGTCTGCTACAAGAACAGCAAGCGTTC +
Preference number: 1 (lower is better)
Translates to: FSGTRILDGCKPQCG*WEPSTGLLQEQQAF
Trigger: GAACGCTTGCTGTTCTTGTAGCAGACCCGTGCTTGGTTCCCAGCACCCACACTGTGGTTTGCAACCATCCAGGATTCTAGTTCCAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236995.2
3UTR CCA 90 bp AACATAACATGCTACGTGATTACAAGCATCATGAAGACCATGGGGTaGGGAAGACTCCCTCCAATGTGGGGCTCACTCACAGGTGTCCCC +
Preference number: 1 (lower is better)
Translates to: NITCYVITSIMKTMG*GRLPPMWGSLTGVP
Trigger: GGGGACACCTGTGAGTGAGCCCCACATTGGAGGGAGTCTTCCCCACCCCATGGTCTTCATGATGCTTGTAATCACGTAGCATGTTATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236335.2
3UTR TCA 90 bp CTGCAGTGCATGCCCTTGGGCCTTCCCATGCTTCTAACAGCATCTTaGGAACAAAGGTCCCTCCACAACCAAGTTGTCAAGGTCTGTGTA +
Preference number: 1 (lower is better)
Translates to: LQCMPLGLPMLLTAS*EQRSLHNQVVKVCV
Trigger: TACACAGACCTTGACAACTTGGTTGTGGAGGGACCTTTGTTCTCAAGATGCTGTTAGAAGCATGGGAAGGCCCAAGGGCATGCACTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 90 bp TACCCAATGGGCTGGAGAGATAGCTTAGTAGTTAAGAGCACTGGCTaGTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGC +
Preference number: 1 (lower is better)
Translates to: YPMGWRDSLVVKSTG*SSRGPEFNSQQPHG
Trigger: GCCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGCCAGTGCTCTTAACTACTAAGCTATCTCTCCAGCCCATTGGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 90 bp ATGGATGCAAAGGGAAGGGCATGTGAAGGAAGGCAAGTATGTATGTaGACGTGTCCGGTGCATGAATGCCATTCAATGGGCAACTTCCCC +
Preference number: 1 (lower is better)
Translates to: MDAKGRACEGRQVCM*TCPVHECHSMGNFP
Trigger: GGGGAAGTTGCCCATTGAATGGCATTCATGCACCGGACACGTGCACATACATACTTGCCTTCCTTCACATGCCCTTCCCTTTGCATCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 90 bp AGCCCCAGGCAAGAACTAATGTGCCTCCAGACTCTGCAGATTGCCTaGTCTAGCCATTTTATAGGAATGGAATCACACAGCCAGCAGTCC +
Preference number: 1 (lower is better)
Translates to: SPRQELMCLQTLQIA*SSHFIGMESHSQQS
Trigger: GGACTGCTGGCTGTGTGATTCCATTCCTATAAAATGGCTAGAGCAGGCAATCTGCAGAGTCTGGAGGCACATTAGTTCTTGCCTGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 90 bp CCAACCCTCCAACTCCTCATTTCCAGCCCCAGGCAAGAACTAATGTaGCTCCAGACTCTGCAGATTGCCTGCTCTAGCCATTTTATAGGA +
Preference number: 1 (lower is better)
Translates to: PTLQLLISSPRQELM*LQTLQIACSSHFIG
Trigger: TCCTATAAAATGGCTAGAGCAGGCAATCTGCAGAGTCTGGAGGCACATTAGTTCTTGCCTGGGGCTGGAAATGAGGAGTTGGAGGGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 90 bp ATATTCTGGGGCTGGAGAGATGGCTCAGTGGGTAAGAGCACTGACTaGTCTTCCAAAGGTCATGAGTTCAAATCCCAGCAACCACATGGT +
Preference number: 1 (lower is better)
Translates to: IFWGWRDGSVGKSTD*SSKGHEFKSQQPHG
Trigger: ACCATGTGGTTGCTGGGATTTGAACTCATGACCTTTGGAAGAGCAGTCAGTGCTCTTACCCACTGAGCCATCTCTCCAGCCCCAGAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR TCA 90 bp TCCAGCAGTTACAGAACACTTTCTGCTTTTGCAGAAAACCAGAGTTaGGTTCCCAGGACCCACATTGGGCAGCTCACACGCTATCTACCA +
Preference number: 1 (lower is better)
Translates to: SSSYRTLSAFAENQS*VPRTHIGQLTRYLP
Trigger: TGGTAGATAGCGTGTGAGCTGCCCAATGTGGGTCCTGGGAACTCAACTCTGGTTTTCTGCAAAAGCAGAAAGTGTTCTGTAACTGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR TCA 90 bp ATCCCAGCAACCACATGGTGGCTCACAACCATCCATAATGAGATCTaGTGCCCTCTTCTGGGATGTCTGAAAACAGCTACAGTGTACTTA +
Preference number: 1 (lower is better)
Translates to: IPATTWWLTTIHNEI*CPLLGCLKTATVYL
Trigger: TAAGTACACTGTAGCTGTTTTCAGACATCCCAGAAGAGGGCATCAGATCTCATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR TCA 90 bp CAGACCGAGAACATGAAAAGAAGATCAGGAGATAGAGAAGAGGCGTaGGACCAGAAGGGCATACAAATGGCAAAAGTGAAAGGCGGTTCT +
Preference number: 1 (lower is better)
Translates to: QTENMKRRSGDREEA*DQKGIQMAKVKGGS
Trigger: AGAACCGCCTTTCACTTTTGCCATTTGTATGCCCTTCTGGTCTCACGCCTCTTCTCTATCTCCTGATCTTCTTTTCATGTTCTCGGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 90 bp GGGGGAGAGGTAGCTTATGTACTGGCAGAAAAGCTGTCCGTTGACTaGGATAGCGCAATCTATGAAACACATCCATTCATAATGAGGACA +
Preference number: 1 (lower is better)
Translates to: GGEVAYVLAEKLSVD*DSAIYETHPFIMRT
Trigger: TGTCCTCATTATGAATGGATGTGTTTCATAGATTGCGCTATCGCAGTCAACGGACAGCTTTTCTGCCAGTACATAAGCTACCTCTCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CCA 90 bp GTTCAATTCCCAGCAACCACATGGCGGCTCACAACCATCTGTAAATaGGATCTGATGCCCTTTCTGATGTGCATGAAGACATCATACTCA +
Preference number: 1 (lower is better)
Translates to: VQFPATTWRLTTICK*DLMPFLMCMKTSYS
Trigger: TGAGTATGATGTCTTCATGCACATCAGAAAGGGCATCAGATCCCATTTACAGATGGTTGTGAGCCGCCATGTGGTTGCTGGGAATTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CCA 90 bp CCAAGGGCCACTGATCCAAAACTTAAAAATGCTTACCCAATGGGCTaGAGAGATAGCTTAGTAGTTAAGAGCACTGGCTGCTCTTCCAGA +
Preference number: 1 (lower is better)
Translates to: PRATDPKLKNAYPMG*RDSLVVKSTGCSSR
Trigger: TCTGGAAGAGCAGCCAGTGCTCTTAACTACTAAGCTATCTCTCCAGCCCATTGGGTAAGCATTTTTAAGTTTTGGATCAGTGGCCCTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR TCA 90 bp TTAATCCTGTCAGCAGGGAAGACCACAGAGCTAATGCCCGACATCTaGCTCAGCACTGAACATAACATGCTACGTGATTACAAGCATCAT +
Preference number: 1 (lower is better)
Translates to: LILSAGKTTELMPDI*LSTEHNMLRDYKHH
Trigger: ATGATGCTTGTAATCACGTAGCATGTTATGTTCAGTGCTGAGTCAGATGTCGGGCATTAGCTCTGTGGTCTTCCCTGCTGACAGGATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236335.2
3UTR TCA 90 bp TCTGTACAGACTCATGTGTATCCCTGGTTCAGCGCAAACTTCTTTTaGATCCTTTCAGGCCTCAAGACCAGCCTTTTACACAAAGGGACT +
Preference number: 1 (lower is better)
Translates to: SVQTHVYPWFSANFF*ILSGLKTSLLHKGT
Trigger: AGTCCCTTTGTGTAAAAGGCTGGTCTTGAGGCCTGAAAGGATTCAAAAGAAGTTTGCGCTGAACCAGGGATACACATGAGTCTGTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 90 bp TGCAAGTGCACTGTCCCAACTCCTGCCAAGGCCTGGCCACATACATaGTTTTCAATGCATACAGAAGCACACTTAAGGAATAAGGATTAT +
Preference number: 1 (lower is better)
Translates to: CKCTVPTPAKAWPHT*FSMHTEAHLRNKDY
Trigger: ATAATCCTTATTCCTTAAGTGTGCTTCTGTATGCATTGAAAAGCATGTATGTGGCCAGGCCTTGGCAGGAGTTGGGACAGTGCACTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CCA 90 bp TGGCTTTTCTGGAAAACGTCCATGCTGTCTTCTCGGACTTGTCCTTaGGGATATCGTTCTTATCCTCATAAGCTAAGAAGTAGAGCGAGA +
Preference number: 1 (lower is better)
Translates to: WLFWKTSMLSSRTCP*GYRSYPHKLRSRAR
Trigger: TCTCGCTCTACTTCTTAGCTTATGAGGATAAGAACGATATCCCCAAGGACAAGTCCGAGAAGACAGCATGGACGTTTTCCAGAAAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236619.2
3UTR TCA 90 bp ACGCCAGTCCTTTCATTTTCCCGTCATCAGGCTTCTTCACAAACTTaGCACCTAGTTCTTCAAATCTCTTACAGGCACTGTAGACATCAG +
Preference number: 1 (lower is better)
Translates to: TPVLSFSRHQASSQT*HLVLQISYRHCRHQ
Trigger: CTGATGTCTACAGTGCCTGTAAGAGATTTGAAGAACTAGGTGTCAAGTTTGTGAAGAAGCCTGATGACGGGAAAATGAAAGGACTGGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000024823.14
ENSMUST00000236619.2
ENSMUST00000236995.2
3UTR GCA 90 bp ATCCTTTCAGGCCTCAAGACCAGCCTTTTACACAAAGGGACTTGCTaGCCAGACCTTTATGTACTAAACAGTGTTAGCTTTATTTCAGCC +
Preference number: 1 (lower is better)
Translates to: ILSGLKTSLLHKGTC*PDLYVLNSVSFISA
Trigger: GGCTGAAATAAAGCTAACACTGTTTAGTACATAAAGGTCTGGGCAGCAAGTCCCTTTGTGTAAAAGGCTGGTCTTGAGGCCTGAAAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 90 bp TCCCTAAGTCTAGGAAGACTGACACACGGAGGCCAAATAGTACTATaGATTCATTATACGTCTTCGTTTGCTCTGCCTAAGTTACGGCTT +
Preference number: 1 (lower is better)
Translates to: SLSLGRLTHGGQIVL*IHYTSSFALPKLRL
Trigger: AAGCCGTAACTTAGGCAGAGCAAACGAAGACGTATAATGAATGCATAGTACTATTTGGCCTCCGTGTGTCAGTCTTCCTAGACTTAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 90 bp TCCCCCATACCTCAAAGGCACATTCTCCCGAAACTAAATAATCGTTaGTATTTTGTTAGGATTCAGAATCTCAATCCAGTAGCCGTCAGG +
Preference number: 1 (lower is better)
Translates to: SPIPQRHILPKLNNR*YFVRIQNLNPVAVR
Trigger: CCTGACGGCTACTGGATTGAGATTCTGAATCCTAACAAAATAGCAACGATTATTTAGTTTCGGGAGAATGTGCCTTTGAGGTATGGGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000235171.2
3UTR CCA 90 bp AGCAAGTACTTCCCACCCCTAGAAATATGGTTCACATTGTTAAATTaGGTAGGTCCAGTATTAGAATCCCATTTGGTGATTCCAGCATTG +
Preference number: 1 (lower is better)
Translates to: SKYFPPLEIWFTLLN*VGPVLESHLVIPAL
Trigger: CAATGCTGGAATCACCAAATGGGATTCTAATACTGGACCTACCCAATTTAACAATGTGAACCATATTTCTAGGGGTGGGAAGTACTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 90 bp TCCATTAATCCTCAAAGGCACATTCTCCCGAAACTAAATAATCGTTaGTATTTTGTTAGGATTCAGAATCTCAATCCAGTAGCCGTCAGG +
Preference number: 1 (lower is better)
Translates to: SINPQRHILPKLNNR*YFVRIQNLNPVAVR
Trigger: CCTGACGGCTACTGGATTGAGATTCTGAATCCTAACAAAATAGCAACGATTATTTAGTTTCGGGAGAATGTGCCTTTGAGGATTAATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000236619.2
ENSMUST00000236995.2
3UTR CCA 90 bp ATCACAGCAACTACTTATTCAAATATTCATTTTAGAACCCTCTGCTaGCCTATTCCATCAATGGGGTCTAGACACCGGTGTTTCAATAAA +
Preference number: 1 (lower is better)
Translates to: ITATTYSNIHFRTLC*PIPSMGSRHRCFNK
Trigger: TTTATTGAAACACCGGTGTCTAGACCCCATTGATGGAATAGGCCAGCAGAGGGTTCTAAAATGAATATTTGAATAAGTAGTTGCTGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 90 bp AAAATTAGTATTTCTATCTGTGTCCTTGTCAGCATGATTCCGAATTaGTCTCAGGAGTACCTTCTCTTTTGTAAGATAAACACTATGCTG +
Preference number: 1 (lower is better)
Translates to: KISISICVLVSMIPN*SQEYLLFCKINTML
Trigger: CAGCATAGTGTTTATCTTACAAAAGAGAAGGTACTCCTGAGAGCAATTCGGAATCATGCTGACAAGGACACAGATAGAAATACTAATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236335.2
3UTR GCA 90 bp TTGGTGTTACTGCTCAACTGTCCGTTACTAACGTGTTCCATTAGTTaGCTCGAAATTCTAAGTATGCAATTTAGCAAAACACTACATAAA +
Preference number: 1 (lower is better)
Translates to: LVLLLNCPLLTCSIS*LEILSMQFSKTLHK
Trigger: TTTATGTAGTGTTTTGCTAAATTGCATACTTAGAATTTCGAGGCAACTAATGGAACACGTTAGTAACGGACAGTTGAGCAGTAACACCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR-3UTR CCA 90 bp GCTTGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCTCAGCCGGGTGGTGGTaGCGGTGGTGCACGCCTCTA +
Preference number: 2 (lower is better)
Translates to: AWHCPRPSSTAAGRKLRCSAGWW*RWCTPL
Trigger: TAGAGGCGTGCACCACCGCCACCACCACCCGGCTGA...GCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236995.2
3UTR-3UTR CCA 90 bp GTAGCGCTTGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGATCATTCAGCCGGGTaGTGGTGGCGGTGGTGCACG +
Preference number: 2 (lower is better)
Translates to: VALGIAHARLPLQQAGNFDHSAG*WWRWCT
Trigger: CGTGCACCACCGCCACCACCACCCGGCTGAATGATC...GAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAAGCGCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236995.2
3UTR-3UTR CCA 90 bp GCAGAAAGCCTGCCCGGCATGTTAAAGGCCTTGGGCTCTAACCCTGTCCCTACACATTCAGCCGGGTGGTaGTGGCGGTGGTGCACGCCT +
Preference number: 2 (lower is better)
Translates to: AESLPGMLKALGSNPVPTHSAGW*WRWCTP
Trigger: AGGCGTGCACCACCGCCACCACCACCCGGCTGAATG...TGTAGGGACAGGGTTAGAGCCCAAGGCCTTTAACATGCCGGGCAGGCTTTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236995.2
3UTR-3UTR TCA 90 bp CTGTGTAGCGCTTGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAAAGCCTGGTCTACAAGTaGGTTCCAGGACAGCCAGGG +
Preference number: 2 (lower is better)
Translates to: LCSAWHCPRPSSTAAGRKSLVYK*VPGQPG
Trigger: CCCTGGCTGTCCTGGAACTCACTTGTAGACCAGGCT...TTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAAGCGCTACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236995.2
3UTR-3UTR CCA 90 bp GCAGAAAGCCTGCCCGGCATGTTAAAGGCCTTGGGCTCTAACCCTGTCCCTACATCTAATCCCAGCACTTaGGAGGCAGAGGCAGGCGAG +
Preference number: 2 (lower is better)
Translates to: AESLPGMLKALGSNPVPTSNPST*EAEAGE
Trigger: CTCGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAGA...TGTAGGGACAGGGTTAGAGCCCAAGGCCTTTAACATGCCGGGCAGGCTTTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236995.2
3UTR-3UTR CCA 90 bp CTGTGTAGCGCTTGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAATTGCAAACCACAGTGTaGGTGCTGGGAACCAAGCAC +
Preference number: 2 (lower is better)
Translates to: LCSAWHCPRPSSTAAGRKLQTTV*VLGTKH
Trigger: GTGCTTGGTTCCCAGCACCCACACTGTGGTTTGCAA...TTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAAGCGCTACACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236995.2
3UTR-3UTR CCA 90 bp TTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTGACCAGGAGGATTTGAACTaGAGCAGAGAGACCCATCAG +
Preference number: 2 (lower is better)
Translates to: LPTPVFHCSRQETSLQSDQEDLN*SRETHQ
Trigger: CTGATGGGTCTCTCTGCTCCAGTTCAAATCCTCCTG...GTCAGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236335.2
3UTR-3UTR CCA 90 bp CTCCAGGCTATCTGGCCTGCCAGCTTCCGGGCCATTCACCTGTCTCTACCTCCCTTGGCTGCAGAGCCTTaGAAAACACTTTCAGCCCTT +
Preference number: 2 (lower is better)
Translates to: LQAIWPASFRAIHLSLPPLAAEP*KTLSAL
Trigger: AAGGGCTGAAAGTGTTTTCCAAGGCTCTGCAGCCAA...GGGAGGTAGAGACAGGTGAATGGCCCGGAAGCTGGCAGGCCAGATAGCCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CAA 90 bp GATCTCGTTACGGATGGTTGTGAACCACCATGTGGTTCCTGGGATTaGAACTCCAGACCTTCGGAAGAGCAGTCAGGTGCTCTGACCCAC +
Preference number: 2 (lower is better)
Translates to: DLVTDGCEPPCGSWD*NSRPSEEQSGALTH
Trigger: GTGGGTCAGAGCACCTGACTGCTCTTCCGAAGGTCTGGAGTTCAAATCCCAGGAACCACATGGTGGTTCACAACCATCCGTAACGAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR-3UTR TCA 90 bp CTCAGTAGGGCAGGAGGTACCATGAGGCATAGGCATAACCCAGCTACTAGAAACACGGCAATCCCAATGTaGCCAAATCCACGAGGGTCC +
Preference number: 2 (lower is better)
Translates to: LSRAGGTMRHRHNPATRNTAIPM*PNPRGS
Trigger: GGACCCTCGTGGATTTGGTCACATTGGGATTGCCGT...GTTTCTAGTAGCTGGGTTATGCCTATGCCTCATGGTACCTCCTGCCCTACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024823.14
3UTR-3UTR TCA 90 bp TTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTGACACTGAATCAGGACAATaGAAAGGGTTTCAGGAGGAT +
Preference number: 2 (lower is better)
Translates to: LPTPVFHCSRQETSLQSDTESGQ*KGFQED
Trigger: ATCCTCCTGAAACCCTTTTCATTGTCCTGATTCAGT...GTCAGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236335.2
3UTR-3UTR CCA 90 bp CGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTGACCTCAAATCAAGGGTGGCTTTTCTaGAAAACGTCCATGCTGTCT +
Preference number: 2 (lower is better)
Translates to: RPSSTAAGRKLRCSLTSNQGWLF*KTSMLS
Trigger: AGACAGCATGGACGTTTTCCAGAAAAGCCACCCTTG...ATTTGAGGTCAGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236619.2
3UTR CAA 90 bp GTGACAGGGACCGTAGGTCGGGATCAGACACAAGGACACCTGTCCTaGGTTCTAAGTACAGAGTTCCTCCTCTCACTCTTCCTCCACTTA +
Preference number: 2 (lower is better)
Translates to: VTGTVGRDQTQGHLS*VLSTEFLLSLFLHL
Trigger: TAAGTGGAGGAAGAGTGAGAGGAGGAACTCTGTACTTAGAACCAAGGACAGGTGTCCTTGTGTCTGATCCCGACCTACGGTCCCTGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR-3UTR TCA 90 bp CCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTGACCTCTCTTCAAATCACCTCTaGGAATCCATTAATCCTCAA +
Preference number: 2 (lower is better)
Translates to: PTPVFHCSRQETSLQSDLSSNHL*ESINPQ
Trigger: TTGAGGATTAATGGATTCTCAGAGGTGATTTGAAGA...GAGGTCAGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000167624.2
ENSMUST00000235547.2
ENSMUST00000236619.2
ENSMUST00000236995.2
3UTR-3UTR TCA 90 bp AGCTGTGTAGCGCTTGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGATCTTCAAATCACCTCTaGGAATCCATTAATCCTCAA +
Preference number: 2 (lower is better)
Translates to: SCVALGIAHARLPLQQAGSSNHL*ESINPQ
Trigger: TTGAGGATTAATGGATTCTCAGAGGTGATTTGAAGA...TCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAAGCGCTACACAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000167624.2
ENSMUST00000235547.2
ENSMUST00000236619.2
ENSMUST00000236995.2
3UTR-3UTR GCA 90 bp GCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTCTCATTTCTGTTCACTaGTCTGTACTTCCCATTATG +
Preference number: 2 (lower is better)
Translates to: ALPTPVFHCSRQETSLQSLISVH*SVLPIM
Trigger: CATAATGGGAAGTACAGAGCAGTGAACAGAAATGAG...AGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236335.2
3UTR-3UTR GCA 90 bp GTGATGGAGTCAAGATCTACCTGGAGTCAGCTCCTTTTTAATCTCACCCTGCATGCCAGGAAGAAAGACTaGCCCTGGTATGACTTCCCG +
Preference number: 2 (lower is better)
Translates to: VMESRSTWSQLLFNLTLHARKKD*PWYDFP
Trigger: CGGGAAGTCATACCAGGGGCAGTCTTTCTTCCTGGC...ATGCAGGGTGAGATTAAAAAGGAGCTGACTCCAGGTAGATCTTGACTCCATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR-3UTR CCA 90 bp CAAAGCCCCTTGGCTTTCAGTTACTGCCATTTCCTCTTCCCCATGATGACTGTTAGCCCTTGGCTGTCCTaGAACTTGCTCTGTAGACCA +
Preference number: 2 (lower is better)
Translates to: QSPLAFSYCHFLFPMMTVSPWLS*NLLCRP
Trigger: TGGTCTACAGAGCAAGTTCCAGGACAGCCAAGGGCT...AACAGTCATCATGGGGAAGAGGAAATGGCAGTAACTGAAAGCCAAGGGGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CAA 90 bp TTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTGACCTCAAATaGGGTTTTGTCCTCCAGTTGTTGAGTCTTCAAATCACCTCTGAG +
Preference number: 2 (lower is better)
Translates to: FHCSRQETSLQSDLK*GFVLQLLSLQITSE
Trigger: CTCAGAGGTGATTTGAAGACTCAACAACTGGAGGACAAAACCCAATTTGAGGTCAGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024823.14
ENSMUST00000167624.2
ENSMUST00000235547.2
ENSMUST00000236335.2
ENSMUST00000236619.2
ENSMUST00000236995.2
3UTR CAA 90 bp TTTCTGCTTTTGCAGAAAACCAGAGTTGAGTTCCCAGGACCCACATaGGGCAGCTCACACGCTATCTACCACTTGACTATGGCCTTCACA +
Preference number: 2 (lower is better)
Translates to: FLLLQKTRVEFPGPT*GSSHAIYHLTMAFT
Trigger: TGTGAAGGCCATAGTCAAGTGGTAGATAGCGTGTGAGCTGCCCAATGTGGGTCCTGGGAACTCAACTCTGGTTTTCTGCAAAAGCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR-3UTR TCA 90 bp ACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTGACCTCAAATCTTCAAATCACCTCTaGGAATCCATTAATCCTCAA +
Preference number: 2 (lower is better)
Translates to: TPVFHCSRQETSLQSDLKSSNHL*ESINPQ
Trigger: TTGAGGATTAATGGATTCTCAGAGGTGATTTGAAGA...TTTGAGGTCAGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000167624.2
ENSMUST00000235547.2
ENSMUST00000236619.2
ENSMUST00000236995.2
3UTR-3UTR GCA 90 bp CAGTCTGACCTCAAATTGGGTTTTGTCCTCCAGTTGTTGAGTCTTCAAATCACCCACGAGGGTCCGAGTTaGCGTTGTGGTAACTCTGAG +
Preference number: 2 (lower is better)
Translates to: QSDLKLGFVLQLLSLQITHEGPS*RCGNSE
Trigger: CTCAGAGTTACCACAACGGCAACTCGGACCCTCGTG...GGTGATTTGAAGACTCAACAACTGGAGGACAAAACCCAATTTGAGGTCAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236619.2
3UTR-3UTR GCA 90 bp CAGTCTGACCTCAAATTGGGTTTTGTCCTCCAGTTGTTGAGTCTTCAAATCACCAAACCACAGTGTGGGTaGTGGGAACCAAGCACGGGT +
Preference number: 2 (lower is better)
Translates to: QSDLKLGFVLQLLSLQITKPQCG*WEPSTG
Trigger: ACCCGTGCTTGGTTCCCAGCACCCACACTGTGGTTT...GGTGATTTGAAGACTCAACAACTGGAGGACAAAACCCAATTTGAGGTCAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236995.2
3UTR-3UTR GCA 90 bp GTGATGGAGTCAAGATCTACCTGGAGTCAGCTCCTTTTTAATCTCACCCTGCATAATCTGCTGAGTGTCTaGCAGGAAGAAAGACTGCCC +
Preference number: 2 (lower is better)
Translates to: VMESRSTWSQLLFNLTLHNLLSV*QEERLP
Trigger: GGGCAGTCTTTCTTCCTGGCAGACACTCAGCAGATT...ATGCAGGGTGAGATTAAAAAGGAGCTGACTCCAGGTAGATCTTGACTCCATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR-3UTR CCA 90 bp CCCAGAACAACCAGGCTGAGTGACCACATACTGAAAACTATGAAACATCTCTGGGCCCACTCCCCAAAATaGTACTTGGAAATGAGCTCC +
Preference number: 2 (lower is better)
Translates to: PRTTRLSDHILKTMKHLWAHSPK*YLEMSS
Trigger: GGAGCTCATTTCCAAGTACCATTTTGGGGAGTGGGC...CCAGAGATGTTTCATAGTTTTCAGTATGTGGTCACTCAGCCTGGTTGTTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CAA 90 bp GTCTGTACAGACTCATGTGTATCCCTGGTTCAGCGCAAACTTCTTTaGAATCCTTTCAGGCCTCAAGACCAGCCTTTTACACAAAGGGAC +
Preference number: 2 (lower is better)
Translates to: VCTDSCVSLVQRKLL*NPFRPQDQPFTQRD
Trigger: GTCCCTTTGTGTAAAAGGCTGGTCTTGAGGCCTGAAAGGATTCAAAAGAAGTTTGCGCTGAACCAGGGATACACATGAGTCTGTACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR-3UTR TCA 90 bp TCTAATCCCTTCCTCCTCCGTATTCCCAGAAAAGTAAAGTTAGTCCTTGAATTCGGTTTCAGGAGGATTTaGACTGGAGCAGAGAGACCC +
Preference number: 2 (lower is better)
Translates to: SNPFLLRIPRKVKLVLEFGFRRI*TGAERP
Trigger: GGGTCTCTCTGCTCCAGTTCAAATCCTCCTGAAACC...GAATTCAAGGACTAACTTTACTTTTCTGGGAATACGGAGGAGGAAGGGATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236335.2
3UTR CAA 90 bp ACTAGAAACACTGACCGCCCAAGCCTTCAGACCAATCAGGTGGCTTaGTCTGTCGTAACCACAGTACTCATTATTTACATAAAGGATGCT +
Preference number: 2 (lower is better)
Translates to: TRNTDRPSLQTNQVA*SVVTTVLIIYIKDA
Trigger: AGCATCCTTTATGTAAATAATGAGTACTGTGGTTACGACAGACAAAGCCACCTGATTGGTCTGAAGGCTTGGGCGGTCAGTGTTTCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236335.2
3UTR CAA 90 bp AAAGTGAAAGGCGGTTCTCCATGTGGGAAAATAAGCTTATCAGTCTaGTTCCCTAAGTCTAGGAAGACTGACACACGGAGGCCAAATAGT +
Preference number: 2 (lower is better)
Translates to: KVKGGSPCGKISLSV*FPKSRKTDTRRPNS
Trigger: ACTATTTGGCCTCCGTGTGTCAGTCTTCCTAGACTTAGGGAACAAGACTGATAAGCTTATTTTCCCACATGGAGAACCGCCTTTCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR-3UTR TCA 90 bp ATGGCAAAAGTGAAAGGCGGTTCTCCATGTGGGAAAATAAGCTTATCAGTCTTGCTTCTAACAGCATCTTaGGAACAAAGGTCCCTCCAC +
Preference number: 2 (lower is better)
Translates to: MAKVKGGSPCGKISLSVLLLTAS*EQRSLH
Trigger: GTGGAGGGACCTTTGTTCTCAAGATGCTGTTAGAAG...CAAGACTGATAAGCTTATTTTCCCACATGGAGAACCGCCTTTCACTTTTGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR-3UTR TCA 90 bp TTTGCTCGCTACCATCCTGTCCGTTCTTCTTCTGAAGATCATAATTTTTCTCAAACAGTGGCCTCGGGATaGGAGCATTTCACCTGCATT +
Preference number: 2 (lower is better)
Translates to: FARYHPVRSSSEDHNFSQTVASG*EHFTCI
Trigger: AATGCAGGTGAAATGCTCTCATCCCGAGGCCACTGT...TTGAGAAAAATTATGATCTTCAGAAGAAGAACGGACAGGATGGTAGCGAGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR-3UTR CCA 90 bp CCGTCATCAGGCTTCTTCACAAACTTGACACCTAGTTCTTCAAATCTCTTACAGCAAGGGTGGCTTTTCTaGAAAACGTCCATGCTGTCT +
Preference number: 2 (lower is better)
Translates to: PSSGFFTNLTPSSSNLLQQGWLF*KTSMLS
Trigger: AGACAGCATGGACGTTTTCCAGAAAAGCCACCCTTG...CTGTAAGAGATTTGAAGAACTAGGTGTCAAGTTTGTGAAGAAGCCTGATGACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236619.2
3UTR-3UTR CCA 90 bp AAAGGTCATGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAAGTCTGACCTCAAATTaGGTTTTGTCCTCCAGTTGT +
Preference number: 2 (lower is better)
Translates to: KGHEFKSQQPHGGSQPSISLTSN*VLSSSC
Trigger: ACAACTGGAGGACAAAACCCAATTTGAGGTCAGACT...TATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCATGACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CAA 90 bp TATTTTGTTAGGATTCAGAATCTCAATCCAGTAGCCGTCAGGGTCTaGAATGAACGCCAGTCCTTTCATTTTCCCGTCATCAGGCTTCTT +
Preference number: 2 (lower is better)
Translates to: YFVRIQNLNPVAVRV*NERQSFHFPVIRLL
Trigger: AAGAAGCCTGATGACGGGAAAATGAAAGGACTGGCGTTCATTCAAGACCCTGACGGCTACTGGATTGAGATTCTGAATCCTAACAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000024823.14
ENSMUST00000235171.2
ENSMUST00000236619.2
ENSMUST00000236995.2
3UTR CAA 90 bp AGATTGGCAAGATATAAAAATATCCACGTCCCTAATAAGCTATACTaGAAAATTAGATCATTCAGCCGGGTGGTGGTGGCGGTGGTGCAC +
Preference number: 2 (lower is better)
Translates to: RLARYKNIHVPNKLY*KIRSFSRVVVAVVH
Trigger: GTGCACCACCGCCACCACCACCCGGCTGAATGATCTAATTTTCAAGTATAGCTTATTAGGGACGTGGATATTTTTATATCTTGCCAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000236995.2
3UTR-3UTR CCA 90 bp TGCTACAGCATGGCCCATTGTCTAATCCCTTCCTCCTCCGTATTCCCAGAAAAGCTGTACTTCCCATTATaGAAAGTTATTTCTGAGGAA +
Preference number: 2 (lower is better)
Translates to: CYSMAHCLIPSSSVFPEKLYFPL*KVISEE
Trigger: TTCCTCAGAAATAACTTTCCATAATGGGAAGTACAG...CTTTTCTGGGAATACGGAGGAGGAAGGGATTAGACAATGGGCCATGCTGTAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236335.2
3UTR-3UTR TCA 90 bp CAGTCTGACCTCAAATTGGGTTTTGTCCTCCAGTTGTTGAGTCTTCAAATCACCATGGAAAGTTATTTCTaGGGAACTGAAACCCCAGAA +
Preference number: 2 (lower is better)
Translates to: QSDLKLGFVLQLLSLQITMESYF*GTETPE
Trigger: TTCTGGGGTTTCAGTTCCTCAGAAATAACTTTCCAT...GGTGATTTGAAGACTCAACAACTGGAGGACAAAACCCAATTTGAGGTCAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236335.2
3UTR-3UTR TCA 90 bp ATTCAGAATCTCAATCCAGTAGCCGTCAGGGTCTTGAATGAACGCCAGTCCTTTTCTTCAAATCACCTCTaGGAATCCATTAATCCTCAA +
Preference number: 2 (lower is better)
Translates to: IQNLNPVAVRVLNERQSFSSNHL*ESINPQ
Trigger: TTGAGGATTAATGGATTCTCAGAGGTGATTTGAAGA...AAAGGACTGGCGTTCATTCAAGACCCTGACGGCTACTGGATTGAGATTCTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000236619.2
ENSMUST00000236995.2
3UTR-3UTR TCA 90 bp GAAACTAGAATCAGAAATCTTAAGAAAGACCAGTGGTTTCAGCGGAGCAGTACTATCTGGTCTTTCTCCTaGATGTACTTCATTCCCCCA +
Preference number: 2 (lower is better)
Translates to: ETRIRNLKKDQWFQRSSTIWSFS*MYFIPP
Trigger: TGGGGGAATGAAGTACATTCAGGAGAAAGACCAGAT...AGTACTGCTCCGCTGAAACCACTGGTCTTTCTTAAGATTTCTGATTCTAGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR-3UTR CCA 90 bp CCCAGAACAACCAGGCTGAGTGACCACATACTGAAAACTATGAAACATCTCTGGCCACCCCTAGAAATATaGTTCACATTGTTAAATTGG +
Preference number: 2 (lower is better)
Translates to: PRTTRLSDHILKTMKHLWPPLEI*FTLLNW
Trigger: CCAATTTAACAATGTGAACCATATTTCTAGGGGTGG...CCAGAGATGTTTCATAGTTTTCAGTATGTGGTCACTCAGCCTGGTTGTTCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR-3UTR TCA 90 bp ACTCATTATTTACATAAAGGATGCTACAGCATGGCCCATTGTCTAATCCCTTCCACTGAATCAGGACAATaGAAAGGGTTTCAGGAGGAT +
Preference number: 2 (lower is better)
Translates to: THYLHKGCYSMAHCLIPSTESGQ*KGFQED
Trigger: ATCCTCCTGAAACCCTTTTCATTGTCCTGATTCAGT...GGAAGGGATTAGACAATGGGCCATGCTGTAGCATCCTTTATGTAAATAATGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236335.2
3UTR-3UTR CCA 90 bp GAAACTAGAATCAGAAATCTTAAGAAAGACCAGTGGTTTCAGCGGAGCAGTACTGTAAGGAGATCAATTTaGCTGCAGAGCCTTGGAAAA +
Preference number: 2 (lower is better)
Translates to: ETRIRNLKKDQWFQRSSTVRRSI*LQSLGK
Trigger: TTTTCCAAGGCTCTGCAGCCAAATTGATCTCCTTAC...AGTACTGCTCCGCTGAAACCACTGGTCTTTCTTAAGATTTCTGATTCTAGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CAA 90 bp CCACATAGGGTGGTTAGTATTGATTTCAAACCTAGTTTACTCCTATaGATATTTTTGCTCGCTACCATCCTGTCCGTTCTTCTTCTGAAG +
Preference number: 2 (lower is better)
Translates to: PHRVVSIDFKPSLLL*IFLLATILSVLLLK
Trigger: CTTCAGAAGAAGAACGGACAGGATGGTAGCGAGCAAAAATATCAATAGGAGTAAACTAGGTTTGAAATCAATACTAACCACCCTATGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR-3UTR GCA 90 bp GAAACTAGAATCAGAAATCTTAAGAAAGACCAGTGGTTTCAGCGGAGCAGTACTTATTTACATAAAGGATaGTACAGCATGGCCCATTGT +
Preference number: 2 (lower is better)
Translates to: ETRIRNLKKDQWFQRSSTYLHKG*YSMAHC
Trigger: ACAATGGGCCATGCTGTAGCATCCTTTATGTAAATA...AGTACTGCTCCGCTGAAACCACTGGTCTTTCTTAAGATTTCTGATTCTAGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CAA 90 bp GTGTTGTATCCCCAGCCTTGTTCTACACAGACATTTAATATGATTTaGTGCCCCCAATCATGCTCTGAACACTCCATTAAATCTTTATAT +
Preference number: 2 (lower is better)
Translates to: VLYPQPCSTQTFNMI*CPQSCSEHSIKSLY
Trigger: ATATAAAGATTTAATGGAGTGTTCAGAGCATGATTGGGGGCACAAAATCATATTAAATGTCTGTGTAGAACAAGGCTGGGGATACAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR-3UTR TCA 90 bp TGCTCTCAGGAGTACCTTCTCTTTTGTAAGATAAACACTATGCTGTTTGAAGTAGCTTCTTCACAAACTTaGCACCTAGTTCTTCAAATC +
Preference number: 2 (lower is better)
Translates to: CSQEYLLFCKINTMLFEVASSQT*HLVLQI
Trigger: GATTTGAAGAACTAGGTGTCAAGTTTGTGAAGAAGC...TACTTCAAACAGCATAGTGTTTATCTTACAAAAGAGAAGGTACTCCTGAGAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024823.14
3UTR GCA 72 bp AGGCTCCGCCCACAGTTACCTGGCAACAGCCAGGTGTaGCTGACTCACACCCCCTCCTCTCTTGCTCCCTTC +
Preference number: 3 (lower is better)
Translates to: RLRPQLPGNSQV*LTHTPSSLAPF
Trigger: GAAGGGAGCAAGAGAGGAGGGGGTGTGAGTCAGGCACACCTGGCTGTTGCCAGGTAACTGTGGGCGGAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CCA 72 bp GCACATGTCATCTGTCACCCTGATACTGAGCATGGCTaGAGAGAGGTGGATCCCAGGGGCTCCGTGGCCAGC +
Preference number: 3 (lower is better)
Translates to: AHVICHPDTEHG*REVDPRGSVAS
Trigger: GCTGGCCACGGAGCCCCTGGGATCCACCTCTCTCCAGCCATGCTCAGTATCAGGGTGACAGATGACATGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR-3UTR CAA 90 bp GCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTTCTTCAGTGCCCCAGTaGTGCGTGAGCTCAAGGGTG +
Preference number: 3 (lower is better)
Translates to: ALPTPVFHCSRQETSLQSSSVPQ*CVSSRV
Trigger: CACCCTTGAGCTCACGCACAACTGGGGCACTGAAGA...AGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236619.2
3UTR TCA 72 bp AGACCTTCGGAAGAGCAGTCAGGTGCTCTGACCCACTaGGCCGTCTCACCAGCCCCACCACTTGGGAACTTG +
Preference number: 3 (lower is better)
Translates to: RPSEEQSGALTH*AVSPAPPLGNL
Trigger: CAAGTTCCCAAGTGGTGGGGCTGGTGAGACGGCTCAGTGGGTCAGAGCACCTGACTGCTCTTCCGAAGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 72 bp GGATTTGAACTCCAGACCTTCGGAAGAGCAGTCAGGTaGTCTGACCCACTGAGCCGTCTCACCAGCCCCACC +
Preference number: 3 (lower is better)
Translates to: GFELQTFGRAVR*SDPLSRLTSPT
Trigger: GGTGGGGCTGGTGAGACGGCTCAGTGGGTCAGAGCACCTGACTGCTCTTCCGAAGGTCTGGAGTTCAAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 72 bp CAACTTCCCCTACTGTGTGCTCCAGGCTATCTGGCCTaGCAGCTTCCGGGCCATTCACCTGTCTCTACCTCC +
Preference number: 3 (lower is better)
Translates to: QLPLLCAPGYLA*QLPGHSPVSTS
Trigger: GGAGGTAGAGACAGGTGAATGGCCCGGAAGCTGGCAGGCCAGATAGCCTGGAGCACACAGTAGGGGAAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR-3UTR CAA 90 bp GCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTCTACAGCATGGCCCATaGTCTAATCCCTTCCTCCTC +
Preference number: 3 (lower is better)
Translates to: ALPTPVFHCSRQETSLQSLQHGP*SNPFLL
Trigger: GAGGAGGAAGGGATTAGACAATGGGCCATGCTGTAG...AGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236335.2
3UTR-3UTR CAA 90 bp CTCCAGGCTATCTGGCCTGCCAGCTTCCGGGCCATTCACCTGTCTCTACCTCCCGCTTCTGGACACAGCTaGAGGAAGTTAGCAGTACAC +
Preference number: 3 (lower is better)
Translates to: LQAIWPASFRAIHLSLPPASGHS*RKLAVH
Trigger: GTGTACTGCTAACTTCCTCAAGCTGTGTCCAGAAGC...GGGAGGTAGAGACAGGTGAATGGCCCGGAAGCTGGCAGGCCAGATAGCCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 72 bp ATATCCATTCAAGCAGCTAGACCATGGGCCCCGCAGTaGCAGGCAGGAACCTTGAAGCTTTGGCCTGGGAGG +
Preference number: 3 (lower is better)
Translates to: ISIQAARPWAPQ*QAGTLKLWPGR
Trigger: CCTCCCAGGCCAAAGCTTCAAGGTTCCTGCCTGGCACTGCGGGGCCCATGGTCTAGCTGCTTGAATGGATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 72 bp GCAGTGCTCATTTACCAGGGATCCCATTCAGTGTCCTaGTCTGGCTCCTACCCACCCGCAGTTGGTGCTTCC +
Preference number: 3 (lower is better)
Translates to: AVLIYQGSHSVS*SGSYPPAVGAS
Trigger: GGAAGCACCAACTGCGGGTGGGTAGGAGCCAGAGCAGGACACTGAATGGGATCCCTGGTAAATGAGCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 72 bp AAATTAGATCATTCAGCCGGGTGGTGGTGGCGGTGGTaGACGCCTCTAATCCCAGCACTTGGGAGGCAGAGG +
Preference number: 3 (lower is better)
Translates to: KLDHSAGWWWRW*TPLIPALGRQR
Trigger: CCTCTGCCTCCCAAGTGCTGGGATTAGAGGCGTGCACCACCGCCACCACCACCCGGCTGAATGATCTAATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236995.2
3UTR CCA 72 bp ATGGGCAACTTCCCCTACTGTGTGCTCCAGGCTATCTaGCCTGCCAGCTTCCGGGCCATTCACCTGTCTCTA +
Preference number: 3 (lower is better)
Translates to: MGNFPYCVLQAI*PASFRAIHLSL
Trigger: TAGAGACAGGTGAATGGCCCGGAAGCTGGCAGGCCAGATAGCCTGGAGCACACAGTAGGGGAAGTTGCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR TCA 72 bp CTGAGTGTCTGCCAGGAAGAAAGACTGCCCCTGGTATaGCTTCCCGGGGCAGTGCTCATTTACCAGGGATCC +
Preference number: 3 (lower is better)
Translates to: LSVCQEERLPLV*LPGAVLIYQGS
Trigger: GGATCCCTGGTAAATGAGCACTGCCCCGGGAAGTCATACCAGGGGCAGTCTTTCTTCCTGGCAGACACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CCA 72 bp GCTCATTTACCAGGGATCCCATTCAGTGTCCTGCTCTaGCTCCTACCCACCCGCAGTTGGTGCTTCCTGTTC +
Preference number: 3 (lower is better)
Translates to: AHLPGIPFSVLL*LLPTRSWCFLF
Trigger: GAACAGGAAGCACCAACTGCGGGTGGGTAGGAGCCAGAGCAGGACACTGAATGGGATCCCTGGTAAATGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 72 bp GTCCCCAACCCCCAGCCTGTTCTTCCCACCGCTACTTaGCAGGTAAGTGTATTTGCAAGTGCACTGTCCCAA +
Preference number: 3 (lower is better)
Translates to: VPNPQPVLPTAT*QVSVFASALSQ
Trigger: TTGGGACAGTGCACTTGCAAATACACTTACCTGGCAAGTAGCGGTGGGAAGAACAGGCTGGGGGTTGGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 72 bp GTCAAGAGGACCCTTGCCAGACACTGCAAAGGCTGCTaGTTCATAAGAAGTTGCAGCCTGCCGGGCGGTATT +
Preference number: 3 (lower is better)
Translates to: VKRTLARHCKGC*FIRSCSLPGGI
Trigger: AATACCGCCCGGCAGGCTGCAACTTCTTATGAAGCAGCAGCCTTTGCAGTGTCTGGCAAGGGTCCTCTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR-3UTR CAA 90 bp CTCCAGGCTATCTGGCCTGCCAGCTTCCGGGCCATTCACCTGTCTCTACCTCCCTTTTTCAAACATGGGTaGCAGCTTGCATGGTTAGTG +
Preference number: 3 (lower is better)
Translates to: LQAIWPASFRAIHLSLPPFFKHG*QLAWLV
Trigger: CACTAACCATGCAAGCTGCAACCCATGTTTGAAAAA...GGGAGGTAGAGACAGGTGAATGGCCCGGAAGCTGGCAGGCCAGATAGCCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR TCA 72 bp CTGTGCTTCTTTCTCTGTGGTATTCAAGCCCAAGTGTaGGCAGAGAGCATAGGCCAGACTCCCGGCAGGTTC +
Preference number: 3 (lower is better)
Translates to: LCFFLCGIQAQV*AESIGQTPGRF
Trigger: GAACCTGCCGGGAGTCTGGCCTATGCTCTCTGCTCACACTTGGGCTTGAATACCACAGAGAAAGAAGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236335.2
3UTR TCA 72 bp ATCCCAGCACTCAAGAGGCAGAGGCAGGCTGATTTCTaGGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTC +
Preference number: 3 (lower is better)
Translates to: IPALKRQRQADF*VRGQPGLQSEF
Trigger: GAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCAGCCTGCCTCTGCCTCTTGAGTGCTGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR TCA 72 bp CGGATGGTTGTGAACCACCATGTGGTTCCTGGGATTTaGACTCCAGACCTTCGGAAGAGCAGTCAGGTGCTC +
Preference number: 3 (lower is better)
Translates to: RMVVNHHVVPGI*TPDLRKSSQVL
Trigger: GAGCACCTGACTGCTCTTCCGAAGGTCTGGAGTTCAAATCCCAGGAACCACATGGTGGTTCACAACCATCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR TCA 72 bp GACCCACATTGGGCAGCTCACACGCTATCTACCACTTaGCTATGGCCTTCACAGGCACCTACACACATGCAC +
Preference number: 3 (lower is better)
Translates to: DPHWAAHTLSTT*LWPSQAPTHMH
Trigger: GTGCATGTGTGTAGGTGCCTGTGAAGGCCATAGTCAAGTGGTAGATAGCGTGTGAGCTGCCCAATGTGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 72 bp TGTTCTTCCCACCGCTACTTGCCAGGTAAGTGTATTTaGAAGTGCACTGTCCCAACTCCTGCCAAGGCCTGG +
Preference number: 3 (lower is better)
Translates to: CSSHRYLPGKCI*KCTVPTPAKAW
Trigger: CCAGGCCTTGGCAGGAGTTGGGACAGTGCACTTGCAAATACACTTACCTGGCAAGTAGCGGTGGGAAGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 72 bp GCCTGTCCACAAGTCAAGAGGACCCTTGCCAGACACTaGAAAGGCTGCTGCTTCATAAGAAGTTGCAGCCTG +
Preference number: 3 (lower is better)
Translates to: ACPQVKRTLARH*KGCCFIRSCSL
Trigger: CAGGCTGCAACTTCTTATGAAGCAGCAGCCTTTGCAGTGTCTGGCAAGGGTCCTCTTGACTTGTGGACAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CCA 72 bp ACTGGAGCAGAGAGACCCATCAGTCCCCAACGCTTCTaGTCGCCGCAGCATCTTGAATCACGCTGTTTCTTT +
Preference number: 3 (lower is better)
Translates to: TGAERPISPQRF*SPQHLESRCFF
Trigger: AAAGAAACAGCGTGATTCAAGATGCTGCGGCGACCAGAAGCGTTGGGGACTGATGGGTCTCTCTGCTCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000024823.14
ENSMUST00000235171.2
ENSMUST00000236335.2
3UTR-3UTR CAA 90 bp TTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTGACTTTGTCCTCCAGTTGTaGAGTCTTCAAATCACCTCT +
Preference number: 3 (lower is better)
Translates to: LPTPVFHCSRQETSLQSDFVLQL*SLQITS
Trigger: AGAGGTGATTTGAAGACTCAACAACTGGAGGACAAA...GTCAGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000024823.14
ENSMUST00000167624.2
ENSMUST00000235547.2
ENSMUST00000236335.2
ENSMUST00000236619.2
ENSMUST00000236995.2
3UTR TCA 72 bp CCTGTGAGGAAGAATCGCCGCAGATCCACCCTTCAGTaGTGGAGTCAAGATCTACCTGGAGTCAGCTCCTTT +
Preference number: 3 (lower is better)
Translates to: PVRKNRRRSTLQ*WSQDLPGVSSF
Trigger: AAAGGAGCTGACTCCAGGTAGATCTTGACTCCATCACTGAAGGGTGGATCTGCGGCGATTCTTCCTCACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 72 bp TGTAGACCAGGCTGGCCTCAAACTCAGAAATCCACCTaGCTCTGCCTCCCAATTGCTGGGATTAAAGGCGTT +
Preference number: 3 (lower is better)
Translates to: CRPGWPQTQKST*LCLPIAGIKGV
Trigger: AACGCCTTTAATCCCAGCAATTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 72 bp ACTAGAATCCTGGATGGTTGCAAACCACAGTGTGGGTaGTGGGAACCAAGCACGGGTCTGCTACAAGAACAG +
Preference number: 3 (lower is better)
Translates to: TRILDGCKPQCG*WEPSTGLLQEQ
Trigger: CTGTTCTTGTAGCAGACCCGTGCTTGGTTCCCAGCACCCACACTGTGGTTTGCAACCATCCAGGATTCTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236995.2
3UTR GCA 72 bp GCCATCAGATTCTCTGGAACTAGAATCCTGGATGGTTaGAAACCACAGTGTGGGTGCTGGGAACCAAGCACG +
Preference number: 3 (lower is better)
Translates to: AIRFSGTRILDG*KPQCGCWEPST
Trigger: CGTGCTTGGTTCCCAGCACCCACACTGTGGTTTGCAACCATCCAGGATTCTAGTTCCAGAGAATCTGATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236995.2
3UTR CCA 72 bp TGCTACGTGATTACAAGCATCATGAAGACCATGGGGTaGGGAAGACTCCCTCCAATGTGGGGCTCACTCACA +
Preference number: 3 (lower is better)
Translates to: CYVITSIMKTMG*GRLPPMWGSLT
Trigger: TGTGAGTGAGCCCCACATTGGAGGGAGTCTTCCCCACCCCATGGTCTTCATGATGCTTGTAATCACGTAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236335.2
3UTR CCA 72 bp ATCTGGAGGGGCAGAGGCTTGCTTGTCTTTGGCTTCTaGACACAGCTTGAGGAAGTTAGCAGTACACTTGGG +
Preference number: 3 (lower is better)
Translates to: IWRGRGLLVFGF*TQLEEVSSTLG
Trigger: CCCAAGTGTACTGCTAACTTCCTCAAGCTGTGTCCAGAAGCCAAAGACAAGCAAGCCTCTGCCCCTCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CCA 72 bp TCTGACCCACTGAGCCGTCTCACCAGCCCCACCACTTaGGAACTTGATAGACATGCTTATCATAAGGCTGTG +
Preference number: 3 (lower is better)
Translates to: SDPLSRLTSPTT*ELDRHAYHKAV
Trigger: CACAGCCTTATGATAAGCATGTCTATCAAGTTCCCAAGTGGTGGGGCTGGTGAGACGGCTCAGTGGGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR-3UTR CAA 90 bp TTCCTCAGTAGGGCAGGAGGTACCATGAGGCATAGGCATAACCCAGCTACTAGACTACAGCATGGCCCATaGTCTAATCCCTTCCTCCTC +
Preference number: 3 (lower is better)
Translates to: FLSRAGGTMRHRHNPATRLQHGP*SNPFLL
Trigger: GAGGAGGAAGGGATTAGACAATGGGCCATGCTGTAG...TCTAGTAGCTGGGTTATGCCTATGCCTCATGGTACCTCCTGCCCTACTGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236335.2
3UTR GCA 72 bp CAATCCCAATGTGACCAAATCCACGAGGGTCCGAGTTaGCGTTGTGGTAACTCTGAGTCTCGTCATCTTCAG +
Preference number: 3 (lower is better)
Translates to: QSQCDQIHEGPS*RCGNSESRHLQ
Trigger: CTGAAGATGACGAGACTCAGAGTTACCACAACGGCAACTCGGACCCTCGTGGATTTGGTCACATTGGGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236619.2
3UTR GCA 72 bp GGCTGGAGAGATGGCTCAGTGGGTAAGAGCACTGACTaGTCTTCCAAAGGTCATGAGTTCAAATCCCAGCAA +
Preference number: 3 (lower is better)
Translates to: GWRDGSVGKSTD*SSKGHEFKSQQ
Trigger: TTGCTGGGATTTGAACTCATGACCTTTGGAAGAGCAGTCAGTGCTCTTACCCACTGAGCCATCTCTCCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 72 bp AAGGGAAGGGCATGTGAAGGAAGGCAAGTATGTATGTaGACGTGTCCGGTGCATGAATGCCATTCAATGGGC +
Preference number: 3 (lower is better)
Translates to: KGRACEGRQVCM*TCPVHECHSMG
Trigger: GCCCATTGAATGGCATTCATGCACCGGACACGTGCACATACATACTTGCCTTCCTTCACATGCCCTTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CCA 72 bp CTCGTTACGGATGGTTGTGAACCACCATGTGGTTCCTaGGATTTGAACTCCAGACCTTCGGAAGAGCAGTCA +
Preference number: 3 (lower is better)
Translates to: LVTDGCEPPCGS*DLNSRPSEEQS
Trigger: TGACTGCTCTTCCGAAGGTCTGGAGTTCAAATCCCAGGAACCACATGGTGGTTCACAACCATCCGTAACGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR-3UTR CAA 90 bp ACTGTAGACATCAGGAACGGCAATCCCAATGTGACCTTTAGTCCCAGCACTCGGCCGTCTCTCTGTCCCTaGACAAGACACTACCAAAAA +
Preference number: 3 (lower is better)
Translates to: TVDIRNGNPNVTFSPSTRPSLCP*TRHYQK
Trigger: TTTTTGGTAGTGTCTTGTCAAGGGACAGAGAGACGG...CCGAGTGCTGGGACTAAAGGTCACATTGGGATTGCCGTTCCTGATGTCTACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236995.2
3UTR TCA 72 bp CACTCACAGGTGTCCCCTAGAGCAGCCTTGTACTATTaGCCTCTGTGCTTCTTTCTCTGTGGTATTCAAGCC +
Preference number: 3 (lower is better)
Translates to: HSQVSPRAALYY*PLCFFLCGIQA
Trigger: GGCTTGAATACCACAGAGAAAGAAGCACAGAGGTCAATAGTACAAGGCTGCTCTAGGGGACACCTGTGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236335.2
3UTR TCA 72 bp ATGCCCTTGGGCCTTCCCATGCTTCTAACAGCATCTTaGGAACAAAGGTCCCTCCACAACCAAGTTGTCAAG +
Preference number: 3 (lower is better)
Translates to: MPLGLPMLLTAS*EQRSLHNQVVK
Trigger: CTTGACAACTTGGTTGTGGAGGGACCTTTGTTCTCAAGATGCTGTTAGAAGCATGGGAAGGCCCAAGGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR TCA 72 bp AAAATCCCCGCTGTCCGTTGCCGGAAACTATCGAAGTaGAGACTCTGCCCATTCATTCCCTTGGAAACGCTA +
Preference number: 3 (lower is better)
Translates to: KIPAVRCRKLSK*RLCPFIPLETL
Trigger: TAGCGTTTCCAAGGGAATGAATGGGCAGAGTCTTCACTTCGATAGTTTCCGGCAACGGACAGCGGGGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR TCA 72 bp TACAGAACACTTTCTGCTTTTGCAGAAAACCAGAGTTaGGTTCCCAGGACCCACATTGGGCAGCTCACACGC +
Preference number: 3 (lower is better)
Translates to: YRTLSAFAENQS*VPRTHIGQLTR
Trigger: GCGTGTGAGCTGCCCAATGTGGGTCCTGGGAACTCAACTCTGGTTTTCTGCAAAAGCAGAAAGTGTTCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR TCA 72 bp CATTCCTCACCACAGGCCCAGAACAACCAGGCTGAGTaGCCACATACTGAAAACTATGAAACATCTCTGGGG +
Preference number: 3 (lower is better)
Translates to: HSSPQAQNNQAE*PHTENYETSLG
Trigger: CCCCAGAGATGTTTCATAGTTTTCAGTATGTGGTCACTCAGCCTGGTTGTTCTGGGCCTGTGGTGAGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 72 bp GGCTGGAGAGATAGCTTAGTAGTTAAGAGCACTGGCTaGTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAA +
Preference number: 3 (lower is better)
Translates to: GWRDSLVVKSTG*SSRGPEFNSQQ
Trigger: TTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGCCAGTGCTCTTAACTACTAAGCTATCTCTCCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 72 bp GTGAAGGAAGGCAAGTATGTATGTGCACGTGTCCGGTaGATGAATGCCATTCAATGGGCAACTTCCCCTACT +
Preference number: 3 (lower is better)
Translates to: VKEGKYVCARVR*MNAIQWATSPT
Trigger: AGTAGGGGAAGTTGCCCATTGAATGGCATTCATGCACCGGACACGTGCACATACATACTTGCCTTCCTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CCA 72 bp CCAGCAACCACATGGCGGCTCACAACCATCTGTAAATaGGATCTGATGCCCTTTCTGATGTGCATGAAGACA +
Preference number: 3 (lower is better)
Translates to: PATTWRLTTICK*DLMPFLMCMKT
Trigger: TGTCTTCATGCACATCAGAAAGGGCATCAGATCCCATTTACAGATGGTTGTGAGCCGCCATGTGGTTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR TCA 72 bp TCAGAATCTCAATCCAGTAGCCGTCAGGGTCTTGAATaGACGCCAGTCCTTTCATTTTCCCGTCATCAGGCT +
Preference number: 3 (lower is better)
Translates to: SESQSSSRQGLE*TPVLSFSRHQA
Trigger: AGCCTGATGACGGGAAAATGAAAGGACTGGCGTTCATTCAAGACCCTGACGGCTACTGGATTGAGATTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000024823.14
ENSMUST00000235171.2
ENSMUST00000236619.2
ENSMUST00000236995.2
3UTR TCA 72 bp TCAGCAGGGAAGACCACAGAGCTAATGCCCGACATCTaGCTCAGCACTGAACATAACATGCTACGTGATTAC +
Preference number: 3 (lower is better)
Translates to: SAGKTTELMPDI*LSTEHNMLRDY
Trigger: GTAATCACGTAGCATGTTATGTTCAGTGCTGAGTCAGATGTCGGGCATTAGCTCTGTGGTCTTCCCTGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236335.2
3UTR TCA 72 bp CTTCCCCCTCTCTCCACGTGCTCATGGCCAGCCTCATaGCTCCTCAGTTTGGAGTTTCACATAGTTTATTTT +
Preference number: 3 (lower is better)
Translates to: LPPLSTCSWPAS*LLSLEFHIVYF
Trigger: AAAATAAACTATGTGAAACTCCAAACTGAGGAGTCATGAGGCTGGCCATGAGCACGTGGAGAGAGGGGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR TCA 72 bp GAAAGGGAGCAGTCAGAGTGTGACAGACCGAGAACATaGAAAGAAGATCAGGAGATAGAGAAGAGGCGTGAG +
Preference number: 3 (lower is better)
Translates to: EREQSECDRPRT*KEDQEIEKRRE
Trigger: CTCACGCCTCTTCTCTATCTCCTGATCTTCTTTTCATGTTCTCGGTCTGTCACACTCTGACTGCTCCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CCA 72 bp ATTTGCAAGTGCACTGTCCCAACTCCTGCCAAGGCCTaGCCACATACATGCTTTTCAATGCATACAGAAGCA +
Preference number: 3 (lower is better)
Translates to: ICKCTVPTPAKA*PHTCFSMHTEA
Trigger: TGCTTCTGTATGCATTGAAAAGCATGTATGTGGCCAGGCCTTGGCAGGAGTTGGGACAGTGCACTTGCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CCA 72 bp CTACAAGGCAAATTACTTAGGTGGAGCCTCCTGGAATaGGATGCATGTTGCAGTAAACTTCTGCCCCGAGAA +
Preference number: 3 (lower is better)
Translates to: LQGKLLRWSLLE*DACCSKLLPRE
Trigger: TTCTCGGGGCAGAAGTTTACTGCAACATGCATCCCATTCCAGGAGGCTCCACCTAAGTAATTTGCCTTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR-3UTR CAA 90 bp CCAGGTAAGTGTATTTGCAAGTGCACTGTCCCAACTCCTGCCAAGGCCTGGCCAGAAATATGGTTCACATaGTTAAATTGGGTAGGTCCA +
Preference number: 3 (lower is better)
Translates to: PGKCICKCTVPTPAKAWPEIWFT*LNWVGP
Trigger: TGGACCTACCCAATTTAACAATGTGAACCATATTTC...TGGCCAGGCCTTGGCAGGAGTTGGGACAGTGCACTTGCAAATACACTTACCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR-3UTR CAA 90 bp CTCAGTAGGGCAGGAGGTACCATGAGGCATAGGCATAACCCAGCTACTAGAAACGGCTTCTTCACAAACTaGACACCTAGTTCTTCAAAT +
Preference number: 3 (lower is better)
Translates to: LSRAGGTMRHRHNPATRNGFFTN*TPSSSN
Trigger: ATTTGAAGAACTAGGTGTCAAGTTTGTGAAGAAGCC...GTTTCTAGTAGCTGGGTTATGCCTATGCCTCATGGTACCTCCTGCCCTACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024823.14
3UTR TCA 72 bp CAGAGCCTTGGAAAACACTTTCAGCCCTTAGACAAGTaGGGAATCCCAGGTTACTTCCTTTCAATGGCCGTT +
Preference number: 3 (lower is better)
Translates to: QSLGKHFQPLDK*GIPGYFLSMAV
Trigger: AACGGCCATTGAAAGGAAGTAACCTGGGATTCCTCACTTGTCTAAGGGCTGAAAGTGTTTTCCAAGGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 72 bp TCAGGCCTCAAGACCAGCCTTTTACACAAAGGGACTTaGTGCCCAGACCTTTATGTACTAAACAGTGTTAGC +
Preference number: 3 (lower is better)
Translates to: SGLKTSLLHKGT*CPDLYVLNSVS
Trigger: GCTAACACTGTTTAGTACATAAAGGTCTGGGCAGCAAGTCCCTTTGTGTAAAAGGCTGGTCTTGAGGCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CCA 72 bp AGCCTTGTACTATTGACCTCTGTGCTTCTTTCTCTGTaGTATTCAAGCCCAAGTGTGAGCAGAGAGCATAGG +
Preference number: 3 (lower is better)
Translates to: SLVLLTSVLLSL*YSSPSVSREHR
Trigger: CCTATGCTCTCTGCTCACACTTGGGCTTGAATACCACAGAGAAAGAAGCACAGAGGTCAATAGTACAAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236335.2
3UTR CCA 72 bp CTTGGGAACTTGATAGACATGCTTATCATAAGGCTGTaGTGGTCAGGGTTGGACAAGCTTGAGAACCTATGG +
Preference number: 3 (lower is better)
Translates to: LGNLIDMLIIRL*WSGLDKLENLW
Trigger: CCATAGGTTCTCAAGCTTGTCCAACCCTGACCACCACAGCCTTATGATAAGCATGTCTATCAAGTTCCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 72 bp GGCCTCAAGACCAGCCTTTTACACAAAGGGACTTGCTaGCCAGACCTTTATGTACTAAACAGTGTTAGCTTT +
Preference number: 3 (lower is better)
Translates to: GLKTSLLHKGTC*PDLYVLNSVSF
Trigger: AAAGCTAACACTGTTTAGTACATAAAGGTCTGGGCAGCAAGTCCCTTTGTGTAAAAGGCTGGTCTTGAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 72 bp CAAGAACTAATGTGCCTCCAGACTCTGCAGATTGCCTaGTCTAGCCATTTTATAGGAATGGAATCACACAGC +
Preference number: 3 (lower is better)
Translates to: QELMCLQTLQIA*SSHFIGMESHS
Trigger: GCTGTGTGATTCCATTCCTATAAAATGGCTAGAGCAGGCAATCTGCAGAGTCTGGAGGCACATTAGTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 72 bp GTTAGAGAGATGGTCCAGCAGTTACAGAACACTTTCTaGTTTTGCAGAAAACCAGAGTTGAGTTCCCAGGAC +
Preference number: 3 (lower is better)
Translates to: VREMVQQLQNTF*FCRKPELSSQD
Trigger: GTCCTGGGAACTCAACTCTGGTTTTCTGCAAAAGCAGAAAGTGTTCTGTAACTGCTGGACCATCTCTCTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CCA 72 bp CTTGGAAATGAGCTCCTACAAGGCAAATTACTTAGGTaGAGCCTCCTGGAATGGGATGCATGTTGCAGTAAA +
Preference number: 3 (lower is better)
Translates to: LGNELLQGKLLR*SLLEWDACCSK
Trigger: TTTACTGCAACATGCATCCCATTCCAGGAGGCTCCACCTAAGTAATTTGCCTTGTAGGAGCTCATTTCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CCA 72 bp CCAGAACGTAAGGAGATCAATTTGGCTGCAGAGCCTTaGAAAACACTTTCAGCCCTTAGACAAGTGAGGAAT +
Preference number: 3 (lower is better)
Translates to: PERKEINLAAEP*KTLSALRQVRN
Trigger: ATTCCTCACTTGTCTAAGGGCTGAAAGTGTTTTCCAAGGCTCTGCAGCCAAATTGATCTCCTTACGTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CCA 72 bp CATAAAACACTGTATAGAAGGGCTCCCGAAGACAAATaGCTCAGGTATGTAGCTGCTGATCAGAGGTGGAAA +
Preference number: 3 (lower is better)
Translates to: HKTLYRRAPEDK*LRYVAADQRWK
Trigger: TTTCCACCTCTGATCAGCAGCTACATACCTGAGCCATTTGTCTTCGGGAGCCCTTCTATACAGTGTTTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR TCA 72 bp TCCTTTCAATGGCCGTTTTTAGTGGACACACAGCACTaGCTGGCCTTAGCCATCTTTGATCATATATGTGTC +
Preference number: 3 (lower is better)
Translates to: SFQWPFLVDTQH*LALAIFDHICV
Trigger: GACACATATATGATCAAAGATGGCTAAGGCCAGTCAGTGCTGTGTGTCCACTAAAAACGGCCATTGAAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 72 bp CTAGGAAGACTGACACACGGAGGCCAAATAGTACTATaGATTCATTATACGTCTTCGTTTGCTCTGCCTAAG +
Preference number: 3 (lower is better)
Translates to: LGRLTHGGQIVL*IHYTSSFALPK
Trigger: CTTAGGCAGAGCAAACGAAGACGTATAATGAATGCATAGTACTATTTGGCCTCCGTGTGTCAGTCTTCCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CCA 72 bp TGGAAAACGTCCATGCTGTCTTCTCGGACTTGTCCTTaGGGATATCGTTCTTATCCTCATAAGCTAAGAAGT +
Preference number: 3 (lower is better)
Translates to: WKTSMLSSRTCP*GYRSYPHKLRS
Trigger: ACTTCTTAGCTTATGAGGATAAGAACGATATCCCCAAGGACAAGTCCGAGAAGACAGCATGGACGTTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236619.2
3UTR CCA 72 bp AAACTGTTGGTCTTCCAGAACGTAAGGAGATCAATTTaGCTGCAGAGCCTTGGAAAACACTTTCAGCCCTTA +
Preference number: 3 (lower is better)
Translates to: KLLVFQNVRRSI*LQSLGKHFQPL
Trigger: TAAGGGCTGAAAGTGTTTTCCAAGGCTCTGCAGCCAAATTGATCTCCTTACGTTCTGGAAGACCAACAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR TCA 72 bp TTAACTATTGACTGGATTGAGCTGAGTCATCACCATTaGAGAGAAGCCTGCTTAAGCACAGCTAACTGTCAC +
Preference number: 3 (lower is better)
Translates to: LTIDWIELSHHH*REACLSTANCH
Trigger: GTGACAGTTAGCTGTGCTTAAGCAGGCTTCTCTTCAATGGTGATGACTCAGCTCAATCCAGTCAATAGTTAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR TCA 72 bp CCAAAGAAAGAAGAGCCCATGTGGAAAGGGCAGTGCTaGGGACAGAGTATTAAAGGAATAGTTTCTATTCGA +
Preference number: 3 (lower is better)
Translates to: PKKEEPMWKGQC*GQSIKGIVSIR
Trigger: TCGAATAGAAACTATTCCTTTAATACTCTGTCCTCAGCACTGCCCTTTCCACATGGGCTCTTCTTTCTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 72 bp TGTCGTAACCACAGTACTCATTATTTACATAAAGGATaGTACAGCATGGCCCATTGTCTAATCCCTTCCTCC +
Preference number: 3 (lower is better)
Translates to: CRNHSTHYLHKG*YSMAHCLIPSS
Trigger: GGAGGAAGGGATTAGACAATGGGCCATGCTGTAGCATCCTTTATGTAAATAATGAGTACTGTGGTTACGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236335.2
3UTR GCA 72 bp CGTTCTTCTTCTGAAGATCATAATTTTTCTCAACACTaGGACCGTGTTGTATCCCCAGCCTTGTTCTACACA +
Preference number: 3 (lower is better)
Translates to: RSSSEDHNFSQH*DRVVSPALFYT
Trigger: TGTGTAGAACAAGGCTGGGGATACAACACGGTCGCAGTGTTGAGAAAAATTATGATCTTCAGAAGAAGAACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CCA 72 bp TTTCTTTCCCATGCTTTTTCAACCATAGAAGCTACCTaGCTTAGTCTGTACAGACTCATGTGTATCCCTGGT +
Preference number: 3 (lower is better)
Translates to: FLSHAFSTIEAT*LSLYRLMCIPG
Trigger: ACCAGGGATACACATGAGTCTGTACAGACTAAGCCAGGTAGCTTCTATGGTTGAAAAAGCATGGGAAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR TCA 72 bp GATATAAAAATATCCACGTCCCTAATAAGCTATACTTaGAAATTAGATCATTCAGCCGGGTGGTGGTGGCGG +
Preference number: 3 (lower is better)
Translates to: DIKISTSLISYT*KLDHSAGWWWR
Trigger: CCGCCACCACCACCCGGCTGAATGATCTAATTTTCAAGTATAGCTTATTAGGGACGTGGATATTTTTATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236995.2
3UTR CCA 72 bp ACTACTTATTCAAATATTCATTTTAGAACCCTCTGCTaGCCTATTCCATCAATGGGGTCTAGACACCGGTGT +
Preference number: 3 (lower is better)
Translates to: TTYSNIHFRTLC*PIPSMGSRHRC
Trigger: ACACCGGTGTCTAGACCCCATTGATGGAATAGGCCAGCAGAGGGTTCTAAAATGAATATTTGAATAAGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR-3UTR CAA 90 bp CTGACACATGTCCAATTCTTCAGATCCACAAATGTCCATCTGATGCTAGAAACTCCCAAATCTTTTGATTaGACATTTTCTTTCCCATGC +
Preference number: 3 (lower is better)
Translates to: LTHVQFFRSTNVHLMLETPKSFD*TFSFPC
Trigger: GCATGGGAAAGAAAATGTCAAATCAAAAGATTTGGG...AGTTTCTAGCATCAGATGGACATTTGTGGATCTGAAGAATTGGACATGTGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR TCA 72 bp TGGTTAGTATTGATTTCAAACCTAGTTTACTCCTATTaGTATTTTTGCTCGCTACCATCCTGTCCGTTCTTC +
Preference number: 3 (lower is better)
Translates to: WLVLISNLVYSY*YFCSLPSCPFF
Trigger: GAAGAACGGACAGGATGGTAGCGAGCAAAAATATCAATAGGAGTAAACTAGGTTTGAAATCAATACTAACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR GCA 72 bp CCTCAAAGGCACATTCTCCCGAAACTAAATAATCGTTaGTATTTTGTTAGGATTCAGAATCTCAATCCAGTA +
Preference number: 3 (lower is better)
Translates to: PQRHILPKLNNR*YFVRIQNLNPV
Trigger: TACTGGATTGAGATTCTGAATCCTAACAAAATAGCAACGATTATTTAGTTTCGGGAGAATGTGCCTTTGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000024823.14
ENSMUST00000235171.2
ENSMUST00000236619.2
ENSMUST00000236995.2
3UTR TCA 72 bp ACTACATTACCCAATCGAAGTTTTATTGTGCCATCTTaGCAGGATGCATATTTTAGATGTATTCTGTGTGTA +
Preference number: 3 (lower is better)
Translates to: TTLPNRSFIVPS*QDAYFRCILCV
Trigger: TACACACAGAATACATCTAAAATATGCATCCTGTCAAGATGGCACAATAAAACTTCGATTGGGTAATGTAGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236995.2
CDS-3UTR TCA 90 bp AGCTGTGTAGCGCTTGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGACAAAGGCCTTGCCCCTaGCCTCCCTGGGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: SCVALGIAHARLPLQQAGQRPCP*PPWGSL
Trigger: GAGAGATCCCCAGGGAGGTCAGGGGCAAGGCCTTTG...TCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAAGCGCTACACAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236619.2
CDS-3UTR TCA 90 bp CCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTGACCTCACGGCAATCCCAATGTaGCCAAATCCACGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: PTPVFHCSRQETSLQSDLTAIPM*PNPRGS
Trigger: GGACCCTCGTGGATTTGGTCACATTGGGATTGCCGT...GAGGTCAGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167624.2
ENSMUST00000235547.2
ENSMUST00000236335.2
CDS-3UTR GCA 90 bp CATAGCTGTGTAGCGCTTGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCACACGAGGGTCCGAGTTaGCGTTGTGGTAACTCTGAG +
Preference number: 4 (lower is better)
Translates to: HSCVALGIAHARLPLQQAHEGPS*RCGNSE
Trigger: CTCAGAGTTACCACAACGGCAACTCGGACCCTCGTG...TGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAAGCGCTACACAGCTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000167624.2
ENSMUST00000235547.2
ENSMUST00000236335.2
ENSMUST00000236995.2
CDS-3UTR CCA 90 bp CCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTGACCTCAGCTTCTGCAGGAGGATaGTGTGGCACAGGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: PRPSSTAAGRKLRCSLTSASAGG*CGTGLF
Trigger: AAACAGACCTGTGCCACACCATCCTCCTGCAGAAGC...TGAGGTCAGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236619.2
CDS-3UTR GCA 90 bp AGAGACCCATCAGTCCCCAACGCTTCTGGTCGCCGCAGCATCTTGAATCACGCTCACGAGGGTCCGAGTTaGCGTTGTGGTAACTCTGAG +
Preference number: 4 (lower is better)
Translates to: RDPSVPNASGRRSILNHAHEGPS*RCGNSE
Trigger: CTCAGAGTTACCACAACGGCAACTCGGACCCTCGTG...AGCGTGATTCAAGATGCTGCGGCGACCAGAAGCGTTGGGGACTGATGGGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000235171.2
ENSMUST00000236335.2
CDS-3UTR GCA 90 bp GCAGAAAGCCTGCCCGGCATGTTAAAGGCCTTGGGCTCTAACCCTGTCCCTACACACGAGGGTCCGAGTTaGCGTTGTGGTAACTCTGAG +
Preference number: 4 (lower is better)
Translates to: AESLPGMLKALGSNPVPTHEGPS*RCGNSE
Trigger: CTCAGAGTTACCACAACGGCAACTCGGACCCTCGTG...TGTAGGGACAGGGTTAGAGCCCAAGGCCTTTAACATGCCGGGCAGGCTTTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236995.2
CDS-3UTR CCA 90 bp GCTTGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCCAAGGGTGGCTTTTCTaGAAAACGTCCATGCTGTCT +
Preference number: 4 (lower is better)
Translates to: AWHCPRPSSTAAGRKLRCQGWLF*KTSMLS
Trigger: AGACAGCATGGACGTTTTCCAGAAAAGCCACCCTTG...GCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000167624.2
ENSMUST00000235547.2
ENSMUST00000236335.2
ENSMUST00000236995.2
CDS-3UTR CCA 90 bp CCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTGACCTCCAAGGGTGGCTTTTCTaGAAAACGTCCATGCTGTCT +
Preference number: 4 (lower is better)
Translates to: PTPVFHCSRQETSLQSDLQGWLF*KTSMLS
Trigger: AGACAGCATGGACGTTTTCCAGAAAAGCCACCCTTG...GAGGTCAGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000167624.2
ENSMUST00000235547.2
ENSMUST00000236335.2
ENSMUST00000236995.2
3UTR CAA 72 bp ATTCAGTGTCCTGCTCTGGCTCCTACCCACCCGCAGTaGGTGCTTCCTGTTCCAACAACTCTAGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: IQCPALAPTHPQ*VLPVPTTLGAA
Trigger: AGCAGCACCTAGAGTTGTTGGAACAGGAAGCACCAACTGCGGGTGGGTAGGAGCCAGAGCAGGACACTGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
CDS-3UTR TCA 90 bp ACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTGACCTCAAAGGGATCTCTCCCATTTaGTTAAGAAAGCGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: TPVFHCSRQETSLQSDLKGISPI*LRKRLL
Trigger: CAGCAACCGCTTTCTTAATCAAATGGGAGAGATCCC...TTTGAGGTCAGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236619.2
3UTR CAA 72 bp ACGGATGGTTGTGAACCACCATGTGGTTCCTGGGATTaGAACTCCAGACCTTCGGAAGAGCAGTCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: TDGCEPPCGSWD*NSRPSEEQSGA
Trigger: AGCACCTGACTGCTCTTCCGAAGGTCTGGAGTTCAAATCCCAGGAACCACATGGTGGTTCACAACCATCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
CDS-3UTR TCA 90 bp TTGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGGCTTCTTCACAAACTTaGCACCTAGTTCTTCAAATC +
Preference number: 4 (lower is better)
Translates to: LALPTPVFHCSRQETSLQASSQT*HLVLQI
Trigger: GATTTGAAGAACTAGGTGTCAAGTTTGTGAAGAAGC...CTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167624.2
ENSMUST00000235547.2
ENSMUST00000236335.2
CDS-3UTR TCA 90 bp TGTGTAGCGCTTGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACGCTTCTTCACAAACTTaGCACCTAGTTCTTCAAATC +
Preference number: 4 (lower is better)
Translates to: CVALGIAHARLPLQQAGNASSQT*HLVLQI
Trigger: GATTTGAAGAACTAGGTGTCAAGTTTGTGAAGAAGC...GTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAAGCGCTACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167624.2
ENSMUST00000235547.2
ENSMUST00000236335.2
CDS-3UTR GCA 90 bp GTAGCCGTCAGGGTCTTGAATGAACGCCAGTCCTTTCATTTTCCCGTCATCAGGGAGGAAAGGAGAACATaGGTGAGCTCAAGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: VAVRVLNERQSFHFPVIREERRT*VSSRVA
Trigger: AGCCACCCTTGAGCTCACGCATGTTCTCCTTTCCTC...CCTGATGACGGGAAAATGAAAGGACTGGCGTTCATTCAAGACCCTGACGGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235171.2
CDS-3UTR TCA 90 bp AGTTGCCGTTGTGGTAACTCTGAGTCTCGTCATCTTCAGTGCCCCAGTTGTGCGGGGATCTCTCCCATTTaGTTAAGAAAGCGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: SCRCGNSESRHLQCPSCAGISPI*LRKRLL
Trigger: CAGCAACCGCTTTCTTAATCAAATGGGAGAGATCCC...CGCACAACTGGGGCACTGAAGATGACGAGACTCAGAGTTACCACAACGGCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236619.2
3UTR CAA 72 bp CTAGTGGCAGAAAGCCTGCCCGGCATGTTAAAGGCCTaGGGCTCTAACCCTGTCCCTACAATAAGGTTTACT +
Preference number: 4 (lower is better)
Translates to: LVAESLPGMLKA*GSNPVPTIRFT
Trigger: AGTAAACCTTATTGTAGGGACAGGGTTAGAGCCCAAGGCCTTTAACATGCCGGGCAGGCTTTCTGCCACTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236995.2
3UTR CAA 72 bp CATGCCCTTGGGCCTTCCCATGCTTCTAACAGCATCTaGAGAACAAAGGTCCCTCCACAACCAAGTTGTCAA +
Preference number: 4 (lower is better)
Translates to: HALGPSHASNSI*RTKVPPQPSCQ
Trigger: TTGACAACTTGGTTGTGGAGGGACCTTTGTTCTCAAGATGCTGTTAGAAGCATGGGAAGGCCCAAGGGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CAA 72 bp TTGCAGAAAACCAGAGTTGAGTTCCCAGGACCCACATaGGGCAGCTCACACGCTATCTACCACTTGACTATG +
Preference number: 4 (lower is better)
Translates to: LQKTRVEFPGPT*GSSHAIYHLTM
Trigger: CATAGTCAAGTGGTAGATAGCGTGTGAGCTGCCCAATGTGGGTCCTGGGAACTCAACTCTGGTTTTCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
CDS-3UTR TCA 90 bp TATTTTGTTAGGATTCAGAATCTCAATCCAGTAGCCGTCAGGGTCTTGAATGAACAAAGGCCTTGCCCCTaGCCTCCCTGGGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: YFVRIQNLNPVAVRVLNEQRPCP*PPWGSL
Trigger: GAGAGATCCCCAGGGAGGTCAGGGGCAAGGCCTTTG...TTCATTCAAGACCCTGACGGCTACTGGATTGAGATTCTGAATCCTAACAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236619.2
CDS-3UTR GCA 90 bp GTCAGGGTCTTGAATGAACGCCAGTCCTTTCATTTTCCCGTCATCAGGCTTCTTCTTCAGTGCCCCAGTTaGTACAGAGGAAAGGAGAAC +
Preference number: 4 (lower is better)
Translates to: VRVLNERQSFHFPVIRLLLQCPS*YRGKEN
Trigger: GTTCTCCTTTCCTCTGTAGCAACTGGGGCACTGAAG...AAGAAGCCTGATGACGGGAAAATGAAAGGACTGGCGTTCATTCAAGACCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000235171.2
CDS-3UTR GCA 90 bp GTCAGGGTCTTGAATGAACGCCAGTCCTTTCATTTTCCCGTCATCAGGCTTCTTTCTCGTCATCTTCAGTaGCCCAGTTGCTACAGAGGA +
Preference number: 4 (lower is better)
Translates to: VRVLNERQSFHFPVIRLLSRHLQ*PSCYRG
Trigger: TCCTCTGTAGCAACTGGGGCACTGAAGATGACGAGA...AAGAAGCCTGATGACGGGAAAATGAAAGGACTGGCGTTCATTCAAGACCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235171.2
3UTR CAA 72 bp AGCTGGCTATTCTGTGTCGTCCGGGTTACTGTTTCCTaGGTGTTACTGCTCAACTGTCCGTTACTAACGTGT +
Preference number: 4 (lower is better)
Translates to: SWLFCVVRVTVS*VLLLNCPLLTC
Trigger: ACACGTTAGTAACGGACAGTTGAGCAGTAACACCAAGGAAACAGTAACCCGGACGACACAGAATAGCCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CAA 72 bp ATAGACATGCTTATCATAAGGCTGTGGTGGTCAGGGTaGGACAAGCTTGAGAACCTATGGCTGGGAACCCAT +
Preference number: 4 (lower is better)
Translates to: IDMLIIRLWWSG*DKLENLWLGTH
Trigger: ATGGGTTCCCAGCCATAGGTTCTCAAGCTTGTCCAACCCTGACCACCACAGCCTTATGATAAGCATGTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CAA 72 bp GGCGGTTCTCCATGTGGGAAAATAAGCTTATCAGTCTaGTTCCCTAAGTCTAGGAAGACTGACACACGGAGG +
Preference number: 4 (lower is better)
Translates to: GGSPCGKISLSV*FPKSRKTDTRR
Trigger: CCTCCGTGTGTCAGTCTTCCTAGACTTAGGGAACAAGACTGATAAGCTTATTTTCCCACATGGAGAACCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
CDS-3UTR CCA 90 bp GTCAGGGTCTTGAATGAACGCCAGTCCTTTCATTTTCCCGTCATCAGGCTTCTTCAAGGGTGGCTTTTCTaGAAAACGTCCATGCTGTCT +
Preference number: 4 (lower is better)
Translates to: VRVLNERQSFHFPVIRLLQGWLF*KTSMLS
Trigger: AGACAGCATGGACGTTTTCCAGAAAAGCCACCCTTG...AAGAAGCCTGATGACGGGAAAATGAAAGGACTGGCGTTCATTCAAGACCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000235171.2
ENSMUST00000236995.2
CDS-3UTR GCA 90 bp GCTTTATTTCAGCCTATGATGTGTTTAAACTGCTCACATAGATCACCAAGTGCCCACGAGGGTCCGAGTTaGCGTTGTGGTAACTCTGAG +
Preference number: 4 (lower is better)
Translates to: ALFQPMMCLNCSHRSPSAHEGPS*RCGNSE
Trigger: CTCAGAGTTACCACAACGGCAACTCGGACCCTCGTG...GGCACTTGGTGATCTATGTGAGCAGTTTAAACACATCATAGGCTGAAATAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000167624.2
ENSMUST00000235547.2
ENSMUST00000236335.2
ENSMUST00000236995.2
3UTR CAA 72 bp AGGATTCAGAATCTCAATCCAGTAGCCGTCAGGGTCTaGAATGAACGCCAGTCCTTTCATTTTCCCGTCATC +
Preference number: 4 (lower is better)
Translates to: RIQNLNPVAVRV*NERQSFHFPVI
Trigger: GATGACGGGAAAATGAAAGGACTGGCGTTCATTCAAGACCCTGACGGCTACTGGATTGAGATTCTGAATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000024823.14
ENSMUST00000235171.2
ENSMUST00000236619.2
ENSMUST00000236995.2
3UTR CAA 72 bp AGAGATGGTCCAGCAGTTACAGAACACTTTCTGCTTTaGCAGAAAACCAGAGTTGAGTTCCCAGGACCCACA +
Preference number: 4 (lower is better)
Translates to: RDGPAVTEHFLL*QKTRVEFPGPT
Trigger: TGTGGGTCCTGGGAACTCAACTCTGGTTTTCTGCAAAAGCAGAAAGTGTTCTGTAACTGCTGGACCATCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
CDS-3UTR CCA 90 bp ACTCATTATTTACATAAAGGATGCTACAGCATGGCCCATTGTCTAATCCCTTCCGCTTCTGCAGGAGGATaGTGTGGCACAGGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: THYLHKGCYSMAHCLIPSASAGG*CGTGLF
Trigger: AAACAGACCTGTGCCACACCATCCTCCTGCAGAAGC...GGAAGGGATTAGACAATGGGCCATGCTGTAGCATCCTTTATGTAAATAATGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024823.14
3UTR CAA 72 bp ACTGACCGCCCAAGCCTTCAGACCAATCAGGTGGCTTaGTCTGTCGTAACCACAGTACTCATTATTTACATA +
Preference number: 4 (lower is better)
Translates to: TDRPSLQTNQVA*SVVTTVLIIYI
Trigger: TATGTAAATAATGAGTACTGTGGTTACGACAGACAAAGCCACCTGATTGGTCTGAAGGCTTGGGCGGTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024823.14
ENSMUST00000236335.2
3UTR CAA 72 bp ATTAGAATCCCATTTGGTGATTCCAGCATTGGACATTaGAAACTGGCCCTCCTAGATTCCTGTGACCCACCT +
Preference number: 4 (lower is better)
Translates to: IRIPFGDSSIGH*KLALLDSCDPP
Trigger: AGGTGGGTCACAGGAATCTAGGAGGGCCAGTTTCAAATGTCCAATGCTGGAATCACCAAATGGGATTCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CAA 72 bp AAAACTGTTGGTCTTCCAGAACGTAAGGAGATCAATTaGGCTGCAGAGCCTTGGAAAACACTTTCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: KTVGLPERKEIN*AAEPWKTLSAL
Trigger: AAGGGCTGAAAGTGTTTTCCAAGGCTCTGCAGCCAAATTGATCTCCTTACGTTCTGGAAGACCAACAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CAA 72 bp AGGAGGTGGCCGGAGATTAAGTTTACAGGAGAGAAGTaGACAAGCATAACCTCAGTAGGCTATGAGTTATGT +
Preference number: 4 (lower is better)
Translates to: RRWPEIKFTGEK*TSITSVGYELC
Trigger: ACATAACTCATAGCCTACTGAGGTTATGCTTGTCAACTTCTCTCCTGTAAACTTAATCTCCGGCCACCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CAA 72 bp CATTTCCTCTTCCCCATGATGACTGTTTCTCCTGACTaGAAATTTTGGTTCTTCAGAGAGCTTAGCATGGGG +
Preference number: 4 (lower is better)
Translates to: HFLFPMMTVSPD*KFWFFRELSMG
Trigger: CCCCATGCTAAGCTCTCTGAAGAACCAAAATTTCAAGTCAGGAGAAACAGTCATCATGGGGAAGAGGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CAA 72 bp CCTTTCATTTTCCCGTCATCAGGCTTCTTCACAAACTaGACACCTAGTTCTTCAAATCTCTTACAGGCACTG +
Preference number: 4 (lower is better)
Translates to: PFIFPSSGFFTN*TPSSSNLLQAL
Trigger: CAGTGCCTGTAAGAGATTTGAAGAACTAGGTGTCAAGTTTGTGAAGAAGCCTGATGACGGGAAAATGAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000024823.14
ENSMUST00000236619.2
ENSMUST00000236995.2
3UTR CAA 72 bp CTGCAGTCTGACCTCAAATTGGGTTTTGTCCTCCAGTaGTTGAGTCTTCAAATCACCTCTGAGAATCCATTA +
Preference number: 4 (lower is better)
Translates to: LQSDLKLGFVLQ*LSLQITSENPL
Trigger: TAATGGATTCTCAGAGGTGATTTGAAGACTCAACAACTGGAGGACAAAACCCAATTTGAGGTCAGACTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024823.14
ENSMUST00000167624.2
ENSMUST00000235547.2
ENSMUST00000236335.2
ENSMUST00000236619.2
ENSMUST00000236995.2
CDS-3UTR TCA 90 bp CAGTCTGACCTCAAATTGGGTTTTGTCCTCCAGTTGTTGAGTCTTCAAATCACCGCTTCTTCACAAACTTaGCACCTAGTTCTTCAAATC +
Preference number: 4 (lower is better)
Translates to: QSDLKLGFVLQLLSLQITASSQT*HLVLQI
Trigger: GATTTGAAGAACTAGGTGTCAAGTTTGTGAAGAAGC...GGTGATTTGAAGACTCAACAACTGGAGGACAAAACCCAATTTGAGGTCAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000167624.2
ENSMUST00000235547.2
ENSMUST00000236335.2
3UTR CAA 72 bp CCCCAGCCTTGTTCTACACAGACATTTAATATGATTTaGTGCCCCCAATCATGCTCTGAACACTCCATTAAA +
Preference number: 4 (lower is better)
Translates to: PQPCSTQTFNMI*CPQSCSEHSIK
Trigger: TTTAATGGAGTGTTCAGAGCATGATTGGGGGCACAAAATCATATTAAATGTCTGTGTAGAACAAGGCTGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CAA 72 bp CTTCCCACCCCTAGAAATATGGTTCACATTGTTAAATaGGGTAGGTCCAGTATTAGAATCCCATTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: LPTPRNMVHIVK*GRSSIRIPFGD
Trigger: ATCACCAAATGGGATTCTAATACTGGACCTACCCAATTTAACAATGTGAACCATATTTCTAGGGGTGGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CAA 72 bp AGCAAGTACTTCCCACCCCTAGAAATATGGTTCACATaGTTAAATTGGGTAGGTCCAGTATTAGAATCCCAT +
Preference number: 4 (lower is better)
Translates to: SKYFPPLEIWFT*LNWVGPVLESH
Trigger: ATGGGATTCTAATACTGGACCTACCCAATTTAACAATGTGAACCATATTTCTAGGGGTGGGAAGTACTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CAA 72 bp ATTGATTTCAAACCTAGTTTACTCCTATTGATATTTTaGCTCGCTACCATCCTGTCCGTTCTTCTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: IDFKPSLLLLIF*LATILSVLLLK
Trigger: CTTCAGAAGAAGAACGGACAGGATGGTAGCGAGCAAAAATATCAATAGGAGTAAACTAGGTTTGAAATCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
3UTR CAA 72 bp GTGGTTAGTATTGATTTCAAACCTAGTTTACTCCTATaGATATTTTTGCTCGCTACCATCCTGTCCGTTCTT +
Preference number: 4 (lower is better)
Translates to: VVSIDFKPSLLL*IFLLATILSVL
Trigger: AAGAACGGACAGGATGGTAGCGAGCAAAAATATCAATAGGAGTAAACTAGGTTTGAAATCAATACTAACCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000236335.2
CDS-3UTR CAA 90 bp AGCTGTGTAGCGCTTGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGATGCAGTAGAAAATCCTaGGTGCTAGGGTCTGGATCG +
Preference number: 5 (lower is better)
Translates to: SCVALGIAHARLPLQQAGCSRKS*VLGSGS
Trigger: CGATCCAGACCCTAGCACCAAGGATTTTCTACTGCA...TCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAAGCGCTACACAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024823.14
ENSMUST00000167624.2
ENSMUST00000235547.2
ENSMUST00000236335.2
ENSMUST00000236619.2
ENSMUST00000236995.2
CDS-3UTR CAA 90 bp CGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTGACCTCAAATTCTTCAGTGCCCCAGTaGTGCGTGAGCTCAAGGGTG +
Preference number: 5 (lower is better)
Translates to: RPSSTAAGRKLRCSLTSNSSVPQ*CVSSRV
Trigger: CACCCTTGAGCTCACGCACAACTGGGGCACTGAAGA...ATTTGAGGTCAGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000167624.2
ENSMUST00000235547.2
ENSMUST00000236335.2
ENSMUST00000236995.2
CDS-3UTR CAA 90 bp ACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTGACCTCAAATCTTCAGTGCCCCAGTaGTGCGTGAGCTCAAGGGTG +
Preference number: 5 (lower is better)
Translates to: TPVFHCSRQETSLQSDLKSSVPQ*CVSSRV
Trigger: CACCCTTGAGCTCACGCACAACTGGGGCACTGAAGA...TTTGAGGTCAGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000167624.2
ENSMUST00000235547.2
ENSMUST00000236335.2
ENSMUST00000236995.2
CDS-3UTR CAA 90 bp TGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTTGCAGTAGAAAATCCTaGGTGCTAGGGTCTGGATCG +
Preference number: 5 (lower is better)
Translates to: WHCPRPSSTAAGRKLRCSCSRKS*VLGSGS
Trigger: CGATCCAGACCCTAGCACCAAGGATTTTCTACTGCA...ACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024823.14
ENSMUST00000167624.2
ENSMUST00000235547.2
ENSMUST00000236335.2
ENSMUST00000236619.2
ENSMUST00000236995.2
CDS-3UTR CAA 90 bp TTGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTGCAGTAGAAAATCCTaGGTGCTAGGGTCTGGATCG +
Preference number: 5 (lower is better)
Translates to: LALPTPVFHCSRQETSLQCSRKS*VLGSGS
Trigger: CGATCCAGACCCTAGCACCAAGGATTTTCTACTGCA...CTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024823.14
ENSMUST00000167624.2
ENSMUST00000235547.2
ENSMUST00000236335.2
ENSMUST00000236619.2
ENSMUST00000236995.2
CDS-3UTR CAA 90 bp CTGTGTAGCGCTTGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAATGCAGTAGAAAATCCTaGGTGCTAGGGTCTGGATCG +
Preference number: 5 (lower is better)
Translates to: LCSAWHCPRPSSTAAGRKCSRKS*VLGSGS
Trigger: CGATCCAGACCCTAGCACCAAGGATTTTCTACTGCA...TTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAAGCGCTACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000024823.14
ENSMUST00000167624.2
ENSMUST00000235547.2
ENSMUST00000236335.2
ENSMUST00000236619.2
ENSMUST00000236995.2
CDS GCA 90 bp GTTCCAGGACTACACAGAGAAACCCAAATCCACGAGGGTCCGAGTTaGCGTTGTGGTAACTCTGAGTCTCGTCATCTTCAGTGCCCCAGT +
Preference number: 5 (lower is better)
Translates to: VPGLHRETQIHEGPS*RCGNSESRHLQCPS
Trigger: ACTGGGGCACTGAAGATGACGAGACTCAGAGTTACCACAACGGCAACTCGGACCCTCGTGGATTTGGGTTTCTCTGTGTAGTCCTGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000236995.2
CDS GCA 90 bp GGTCCGAGTTGCCGTTGTGGTAACTCTGAGTCTCGTCATCTTCAGTaGCCCAGTTGCTACAGAGGAAAGGAGAACATGCGTGAGCTCAAG +
Preference number: 5 (lower is better)
Translates to: GPSCRCGNSESRHLQ*PSCYRGKENMRELK
Trigger: CTTGAGCTCACGCATGTTCTCCTTTCCTCTGTAGCAACTGGGGCACTGAAGATGACGAGACTCAGAGTTACCACAACGGCAACTCGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235171.2
CDS-3UTR CAA 90 bp TTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTGACCTCAAATTGGGTTTTTCTTCAGTGCCCCAGTaGTGCGTGAGCTCAAGGGTG +
Preference number: 5 (lower is better)
Translates to: FHCSRQETSLQSDLKLGFSSVPQ*CVSSRV
Trigger: CACCCTTGAGCTCACGCACAACTGGGGCACTGAAGA...AAAACCCAATTTGAGGTCAGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000167624.2
ENSMUST00000235547.2
ENSMUST00000236335.2
ENSMUST00000236995.2
CDS-3UTR CAA 90 bp GCTTGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCGGCTTCTTCACAAACTaGACACCTAGTTCTTCAAAT +
Preference number: 5 (lower is better)
Translates to: AWHCPRPSSTAAGRKLRCGFFTN*TPSSSN
Trigger: ATTTGAAGAACTAGGTGTCAAGTTTGTGAAGAAGCC...GCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167624.2
ENSMUST00000235547.2
ENSMUST00000236335.2
CDS GCA 90 bp TGCCGTTGTGGTAACTCTGAGTCTCGTCATCTTCAGTGCCCCAGTTaGTACAGAGGAAAGGAGAACATGCGTGAGCTCAAGGGTGGCTTT +
Preference number: 5 (lower is better)
Translates to: CRCGNSESRHLQCPS*YRGKENMRELKGGF
Trigger: AAAGCCACCCTTGAGCTCACGCATGTTCTCCTTTCCTCTGTAGCAACTGGGGCACTGAAGATGACGAGACTCAGAGTTACCACAACGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235171.2
CDS-3UTR CAA 90 bp TGTTTCTTTTCCACGCCGCTTTGTTCCCGCTGTCCCCCATACCTCAAAGGCACATGCAGTAGAAAATCCTaGGTGCTAGGGTCTGGATCG +
Preference number: 5 (lower is better)
Translates to: CFFSTPLCSRCPPYLKGTCSRKS*VLGSGS
Trigger: CGATCCAGACCCTAGCACCAAGGATTTTCTACTGCA...TGTGCCTTTGAGGTATGGGGGACAGCGGGAACAAAGCGGCGTGGAAAAGAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000024823.14
ENSMUST00000235171.2
ENSMUST00000236335.2
CDS-3UTR CAA 90 bp TTGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGGGCTTCTTCACAAACTaGACACCTAGTTCTTCAAAT +
Preference number: 5 (lower is better)
Translates to: LALPTPVFHCSRQETSLQGFFTN*TPSSSN
Trigger: ATTTGAAGAACTAGGTGTCAAGTTTGTGAAGAAGCC...CTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000167624.2
ENSMUST00000235547.2
ENSMUST00000236335.2
CDS GCA 90 bp AAATCCAGGGACTTCTTAGGATCCTTAATTCTTAGCATCGTTTGCTaGAGTAGAAAATCCTTGGTGCTAGGGTCTGGATCGGAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: KSRDFLGSLILSIVC*SRKSLVLGSGSEQQ
Trigger: CTGCTGCTCCGATCCAGACCCTAGCACCAAGGATTTTCTACTGCAGCAAACGATGCTAAGAATTAAGGATCCTAAGAAGTCCCTGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000024823.14
ENSMUST00000167624.2
ENSMUST00000235171.2
ENSMUST00000235547.2
ENSMUST00000236335.2
ENSMUST00000236619.2
ENSMUST00000236995.2
CDS GCA 72 bp CTACACAGAGAAACCCAAATCCACGAGGGTCCGAGTTaGCGTTGTGGTAACTCTGAGTCTCGTCATCTTCAG +
Preference number: 6 (lower is better)
Translates to: LHRETQIHEGPS*RCGNSESRHLQ
Trigger: CTGAAGATGACGAGACTCAGAGTTACCACAACGGCAACTCGGACCCTCGTGGATTTGGGTTTCTCTGTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000236995.2
CDS GCA 72 bp GGTAACTCTGAGTCTCGTCATCTTCAGTGCCCCAGTTaGTACAGAGGAAAGGAGAACATGCGTGAGCTCAAG +
Preference number: 6 (lower is better)
Translates to: GNSESRHLQCPS*YRGKENMRELK
Trigger: CTTGAGCTCACGCATGTTCTCCTTTCCTCTGTAGCAACTGGGGCACTGAAGATGACGAGACTCAGAGTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235171.2
CDS CAA 72 bp TTAATTCTTAGCATCGTTTGCTGCAGTAGAAAATCCTaGGTGCTAGGGTCTGGATCGGAGCAGCAGCTGAAA +
Preference number: 6 (lower is better)
Translates to: LILSIVCCSRKS*VLGSGSEQQLK
Trigger: TTTCAGCTGCTGCTCCGATCCAGACCCTAGCACCAAGGATTTTCTACTGCAGCAAACGATGCTAAGAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000024823.14
ENSMUST00000167624.2
ENSMUST00000235171.2
ENSMUST00000235547.2
ENSMUST00000236335.2
ENSMUST00000236619.2
ENSMUST00000236995.2
CDS GCA 72 bp GACTTCTTAGGATCCTTAATTCTTAGCATCGTTTGCTaGAGTAGAAAATCCTTGGTGCTAGGGTCTGGATCG +
Preference number: 6 (lower is better)
Translates to: DFLGSLILSIVC*SRKSLVLGSGS
Trigger: CGATCCAGACCCTAGCACCAAGGATTTTCTACTGCAGCAAACGATGCTAAGAATTAAGGATCCTAAGAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000024823.14
ENSMUST00000167624.2
ENSMUST00000235171.2
ENSMUST00000235547.2
ENSMUST00000236335.2
ENSMUST00000236619.2
ENSMUST00000236995.2
CDS GCA 72 bp AGGGACTTCTTAGGATCCTTAATTCTTAGCATCGTTTaGTGCAGTAGAAAATCCTTGGTGCTAGGGTCTGGA +
Preference number: 6 (lower is better)
Translates to: RDFLGSLILSIV*CSRKSLVLGSG
Trigger: TCCAGACCCTAGCACCAAGGATTTTCTACTGCAGCAAACGATGCTAAGAATTAAGGATCCTAAGAAGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000024823.14
ENSMUST00000167624.2
ENSMUST00000235171.2
ENSMUST00000235547.2
ENSMUST00000236335.2
ENSMUST00000236619.2
ENSMUST00000236995.2