Pregenerated sensors for GLO1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024026Ensembl transcript IDs: ENSMUST00000024823.14, ENSMUST00000167624.2, ENSMUST00000235171.2, ENSMUST00000235547.2, ENSMUST00000236335.2, ENSMUST00000236619.2, ENSMUST00000236995.2
Found 231 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CTCTGTAGACCAGGCTGGCCTCAAACTCAGAAATCCACCTGCCTCTaGCTCCCAATTGCTGGGATTAAAGGCGTTCGCCACCACCGCCCG | + |
Preference number: 1 (lower is better) Translates to: LCRPGWPQTQKSTCL*LPIAGIKGVRHHRP Trigger: CGGGCGGTGGTGGCGAACGCCTTTAATCCCAGCAATTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR GCA 90 bp | CTTCCCGGGGCAGTGCTCATTTACCAGGGATCCCATTCAGTGTCCTaGTCTGGCTCCTACCCACCCGCAGTTGGTGCTTCCTGTTCCAAC | + |
Preference number: 1 (lower is better) Translates to: LPGAVLIYQGSHSVS*SGSYPPAVGASCSN Trigger: GTTGGAACAGGAAGCACCAACTGCGGGTGGGTAGGAGCCAGAGCAGGACACTGAATGGGATCCCTGGTAAATGAGCACTGCCCCGGGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR GCA 90 bp | TGGTTCCTGGGATTTGAACTCCAGACCTTCGGAAGAGCAGTCAGGTaGTCTGACCCACTGAGCCGTCTCACCAGCCCCACCACTTGGGAA | + |
Preference number: 1 (lower is better) Translates to: WFLGFELQTFGRAVR*SDPLSRLTSPTTWE Trigger: TTCCCAAGTGGTGGGGCTGGTGAGACGGCTCAGTGGGTCAGAGCACCTGACTGCTCTTCCGAAGGTCTGGAGTTCAAATCCCAGGAACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR GCA 90 bp | TTCAATGGGCAACTTCCCCTACTGTGTGCTCCAGGCTATCTGGCCTaGCAGCTTCCGGGCCATTCACCTGTCTCTACCTCCCATCTCACC | + |
Preference number: 1 (lower is better) Translates to: FNGQLPLLCAPGYLA*QLPGHSPVSTSHLT Trigger: GGTGAGATGGGAGGTAGAGACAGGTGAATGGCCCGGAAGCTGGCAGGCCAGATAGCCTGGAGCACACAGTAGGGGAAGTTGCCCATTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR CCA 90 bp | CGGGGCAGTGCTCATTTACCAGGGATCCCATTCAGTGTCCTGCTCTaGCTCCTACCCACCCGCAGTTGGTGCTTCCTGTTCCAACAACTC | + |
Preference number: 1 (lower is better) Translates to: RGSAHLPGIPFSVLL*LLPTRSWCFLFQQL Trigger: GAGTTGTTGGAACAGGAAGCACCAACTGCGGGTGGGTAGGAGCCAGAGCAGGACACTGAATGGGATCCCTGGTAAATGAGCACTGCCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR GCA 90 bp | CCCCCAGCCTGTTCTTCCCACCGCTACTTGCCAGGTAAGTGTATTTaGAAGTGCACTGTCCCAACTCCTGCCAAGGCCTGGCCACATACA | + |
Preference number: 1 (lower is better) Translates to: PPACSSHRYLPGKCI*KCTVPTPAKAWPHT Trigger: TGTATGTGGCCAGGCCTTGGCAGGAGTTGGGACAGTGCACTTGCAAATACACTTACCTGGCAAGTAGCGGTGGGAAGAACAGGCTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR GCA 90 bp | AGCAGCAAGGTCCCCAACCCCCAGCCTGTTCTTCCCACCGCTACTTaGCAGGTAAGTGTATTTGCAAGTGCACTGTCCCAACTCCTGCCA | + |
Preference number: 1 (lower is better) Translates to: SSKVPNPQPVLPTAT*QVSVFASALSQLLP Trigger: TGGCAGGAGTTGGGACAGTGCACTTGCAAATACACTTACCTGGCAAGTAGCGGTGGGAAGAACAGGCTGGGGGTTGGGGACCTTGCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR GCA 90 bp | TGTCCACAAGTCAAGAGGACCCTTGCCAGACACTGCAAAGGCTGCTaGTTCATAAGAAGTTGCAGCCTGCCGGGCGGTATTGGCGCACAC | + |
Preference number: 1 (lower is better) Translates to: CPQVKRTLARHCKGC*FIRSCSLPGGIGAH Trigger: GTGTGCGCCAATACCGCCCGGCAGGCTGCAACTTCTTATGAAGCAGCAGCCTTTGCAGTGTCTGGCAAGGGTCCTCTTGACTTGTGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR GCA 90 bp | TCTGCCAGGAAGAAAGACTGCCCCTGGTATGACTTCCCGGGGCAGTaGTCATTTACCAGGGATCCCATTCAGTGTCCTGCTCTGGCTCCT | + |
Preference number: 1 (lower is better) Translates to: SARKKDCPWYDFPGQ*SFTRDPIQCPALAP Trigger: AGGAGCCAGAGCAGGACACTGAATGGGATCCCTGGTAAATGAGCACTGCCCCGGGAAGTCATACCAGGGGCAGTCTTTCTTCCTGGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR CCA 90 bp | CAAAGGCTGCTGCTTCATAAGAAGTTGCAGCCTGCCGGGCGGTATTaGCGCACACCTTTAATCCCAGCACTCAAGAGGCAGAGGCAGGCT | + |
Preference number: 1 (lower is better) Translates to: QRLLLHKKLQPAGRY*RTPLIPALKRQRQA Trigger: AGCCTGCCTCTGCCTCTTGAGTGCTGGGATTAAAGGTGTGCGCCAATACCGCCCGGCAGGCTGCAACTTCTTATGAAGCAGCAGCCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR CCA 90 bp | TGTCTTGTTAACTCACGGCCCATATCCATTCAAGCAGCTAGACCATaGGCCCCGCAGTGCCAGGCAGGAACCTTGAAGCTTTGGCCTGGG | + |
Preference number: 1 (lower is better) Translates to: CLVNSRPISIQAARP*APQCQAGTLKLWPG Trigger: CCCAGGCCAAAGCTTCAAGGTTCCTGCCTGGCACTGCGGGGCCCATGGTCTAGCTGCTTGAATGGATATGGGCCGTGAGTTAACAAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR CCA 90 bp | GTCAGGTGCTCTGACCCACTGAGCCGTCTCACCAGCCCCACCACTTaGGAACTTGATAGACATGCTTATCATAAGGCTGTGGTGGTCAGG | + |
Preference number: 1 (lower is better) Translates to: VRCSDPLSRLTSPTT*ELDRHAYHKAVVVR Trigger: CCTGACCACCACAGCCTTATGATAAGCATGTCTATCAAGTTCCCAAGTGGTGGGGCTGGTGAGACGGCTCAGTGGGTCAGAGCACCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR TCA 90 bp | GAGAATCTGCTGAGTGTCTGCCAGGAAGAAAGACTGCCCCTGGTATaGCTTCCCGGGGCAGTGCTCATTTACCAGGGATCCCATTCAGTG | + |
Preference number: 1 (lower is better) Translates to: ENLLSVCQEERLPLV*LPGAVLIYQGSHSV Trigger: CACTGAATGGGATCCCTGGTAAATGAGCACTGCCCCGGGAAGTCATACCAGGGGCAGTCTTTCTTCCTGGCAGACACTCAGCAGATTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR GCA 90 bp | CAGGAACGGCAATCCCAATGTGACCAAATCCACGAGGGTCCGAGTTaGCGTTGTGGTAACTCTGAGTCTCGTCATCTTCAGTGCCCCAGT | + |
Preference number: 1 (lower is better) Translates to: QERQSQCDQIHEGPS*RCGNSESRHLQCPS Trigger: ACTGGGGCACTGAAGATGACGAGACTCAGAGTTACCACAACGGCAACTCGGACCCTCGTGGATTTGGTCACATTGGGATTGCCGTTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236619.2 |
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3UTR CCA 90 bp | CGTCTGTCGATCTGGAGGGGCAGAGGCTTGCTTGTCTTTGGCTTCTaGACACAGCTTGAGGAAGTTAGCAGTACACTTGGGGAGTTAGGG | + |
Preference number: 1 (lower is better) Translates to: RLSIWRGRGLLVFGF*TQLEEVSSTLGELG Trigger: CCCTAACTCCCCAAGTGTACTGCTAACTTCCTCAAGCTGTGTCCAGAAGCCAAAGACAAGCAAGCCTCTGCCCCTCCAGATCGACAGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR GCA 90 bp | GCCTGTTCTTCCCACCGCTACTTGCCAGGTAAGTGTATTTGCAAGTaGACTGTCCCAACTCCTGCCAAGGCCTGGCCACATACATGCTTT | + |
Preference number: 1 (lower is better) Translates to: ACSSHRYLPGKCICK*TVPTPAKAWPHTCF Trigger: AAAGCATGTATGTGGCCAGGCCTTGGCAGGAGTTGGGACAGTGCACTTGCAAATACACTTACCTGGCAAGTAGCGGTGGGAAGAACAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR CCA 90 bp | GCGTCAGATCTCGTTACGGATGGTTGTGAACCACCATGTGGTTCCTaGGATTTGAACTCCAGACCTTCGGAAGAGCAGTCAGGTGCTCTG | + |
Preference number: 1 (lower is better) Translates to: ASDLVTDGCEPPCGS*DLNSRPSEEQSGAL Trigger: CAGAGCACCTGACTGCTCTTCCGAAGGTCTGGAGTTCAAATCCCAGGAACCACATGGTGGTTCACAACCATCCGTAACGAGATCTGACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR TCA 90 bp | CCAACAACTCTAGGTGCTGCTAACCCACAGATTCGTGGAGAACATTaGCAACTAGGGCTACCAGCCTCCAAGTGCAGTGCAGTGACTGAG | + |
Preference number: 1 (lower is better) Translates to: PTTLGAANPQIRGEH*QLGLPASKCSAVTE Trigger: CTCAGTCACTGCACTGCACTTGGAGGCTGGTAGCCCTAGTTGTCAATGTTCTCCACGAATCTGTGGGTTAGCAGCACCTAGAGTTGTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR GCA 90 bp | TTCTCTGGAACTAGAATCCTGGATGGTTGCAAACCACAGTGTGGGTaGTGGGAACCAAGCACGGGTCTGCTACAAGAACAGCAAGCGTTC | + |
Preference number: 1 (lower is better) Translates to: FSGTRILDGCKPQCG*WEPSTGLLQEQQAF Trigger: GAACGCTTGCTGTTCTTGTAGCAGACCCGTGCTTGGTTCCCAGCACCCACACTGTGGTTTGCAACCATCCAGGATTCTAGTTCCAGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236995.2 |
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3UTR CCA 90 bp | AACATAACATGCTACGTGATTACAAGCATCATGAAGACCATGGGGTaGGGAAGACTCCCTCCAATGTGGGGCTCACTCACAGGTGTCCCC | + |
Preference number: 1 (lower is better) Translates to: NITCYVITSIMKTMG*GRLPPMWGSLTGVP Trigger: GGGGACACCTGTGAGTGAGCCCCACATTGGAGGGAGTCTTCCCCACCCCATGGTCTTCATGATGCTTGTAATCACGTAGCATGTTATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236335.2 |
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3UTR TCA 90 bp | CTGCAGTGCATGCCCTTGGGCCTTCCCATGCTTCTAACAGCATCTTaGGAACAAAGGTCCCTCCACAACCAAGTTGTCAAGGTCTGTGTA | + |
Preference number: 1 (lower is better) Translates to: LQCMPLGLPMLLTAS*EQRSLHNQVVKVCV Trigger: TACACAGACCTTGACAACTTGGTTGTGGAGGGACCTTTGTTCTCAAGATGCTGTTAGAAGCATGGGAAGGCCCAAGGGCATGCACTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR GCA 90 bp | TACCCAATGGGCTGGAGAGATAGCTTAGTAGTTAAGAGCACTGGCTaGTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGC | + |
Preference number: 1 (lower is better) Translates to: YPMGWRDSLVVKSTG*SSRGPEFNSQQPHG Trigger: GCCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGCCAGTGCTCTTAACTACTAAGCTATCTCTCCAGCCCATTGGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR GCA 90 bp | ATGGATGCAAAGGGAAGGGCATGTGAAGGAAGGCAAGTATGTATGTaGACGTGTCCGGTGCATGAATGCCATTCAATGGGCAACTTCCCC | + |
Preference number: 1 (lower is better) Translates to: MDAKGRACEGRQVCM*TCPVHECHSMGNFP Trigger: GGGGAAGTTGCCCATTGAATGGCATTCATGCACCGGACACGTGCACATACATACTTGCCTTCCTTCACATGCCCTTCCCTTTGCATCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR GCA 90 bp | AGCCCCAGGCAAGAACTAATGTGCCTCCAGACTCTGCAGATTGCCTaGTCTAGCCATTTTATAGGAATGGAATCACACAGCCAGCAGTCC | + |
Preference number: 1 (lower is better) Translates to: SPRQELMCLQTLQIA*SSHFIGMESHSQQS Trigger: GGACTGCTGGCTGTGTGATTCCATTCCTATAAAATGGCTAGAGCAGGCAATCTGCAGAGTCTGGAGGCACATTAGTTCTTGCCTGGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR GCA 90 bp | CCAACCCTCCAACTCCTCATTTCCAGCCCCAGGCAAGAACTAATGTaGCTCCAGACTCTGCAGATTGCCTGCTCTAGCCATTTTATAGGA | + |
Preference number: 1 (lower is better) Translates to: PTLQLLISSPRQELM*LQTLQIACSSHFIG Trigger: TCCTATAAAATGGCTAGAGCAGGCAATCTGCAGAGTCTGGAGGCACATTAGTTCTTGCCTGGGGCTGGAAATGAGGAGTTGGAGGGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR GCA 90 bp | ATATTCTGGGGCTGGAGAGATGGCTCAGTGGGTAAGAGCACTGACTaGTCTTCCAAAGGTCATGAGTTCAAATCCCAGCAACCACATGGT | + |
Preference number: 1 (lower is better) Translates to: IFWGWRDGSVGKSTD*SSKGHEFKSQQPHG Trigger: ACCATGTGGTTGCTGGGATTTGAACTCATGACCTTTGGAAGAGCAGTCAGTGCTCTTACCCACTGAGCCATCTCTCCAGCCCCAGAATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR TCA 90 bp | TCCAGCAGTTACAGAACACTTTCTGCTTTTGCAGAAAACCAGAGTTaGGTTCCCAGGACCCACATTGGGCAGCTCACACGCTATCTACCA | + |
Preference number: 1 (lower is better) Translates to: SSSYRTLSAFAENQS*VPRTHIGQLTRYLP Trigger: TGGTAGATAGCGTGTGAGCTGCCCAATGTGGGTCCTGGGAACTCAACTCTGGTTTTCTGCAAAAGCAGAAAGTGTTCTGTAACTGCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR TCA 90 bp | ATCCCAGCAACCACATGGTGGCTCACAACCATCCATAATGAGATCTaGTGCCCTCTTCTGGGATGTCTGAAAACAGCTACAGTGTACTTA | + |
Preference number: 1 (lower is better) Translates to: IPATTWWLTTIHNEI*CPLLGCLKTATVYL Trigger: TAAGTACACTGTAGCTGTTTTCAGACATCCCAGAAGAGGGCATCAGATCTCATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR TCA 90 bp | CAGACCGAGAACATGAAAAGAAGATCAGGAGATAGAGAAGAGGCGTaGGACCAGAAGGGCATACAAATGGCAAAAGTGAAAGGCGGTTCT | + |
Preference number: 1 (lower is better) Translates to: QTENMKRRSGDREEA*DQKGIQMAKVKGGS Trigger: AGAACCGCCTTTCACTTTTGCCATTTGTATGCCCTTCTGGTCTCACGCCTCTTCTCTATCTCCTGATCTTCTTTTCATGTTCTCGGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR GCA 90 bp | GGGGGAGAGGTAGCTTATGTACTGGCAGAAAAGCTGTCCGTTGACTaGGATAGCGCAATCTATGAAACACATCCATTCATAATGAGGACA | + |
Preference number: 1 (lower is better) Translates to: GGEVAYVLAEKLSVD*DSAIYETHPFIMRT Trigger: TGTCCTCATTATGAATGGATGTGTTTCATAGATTGCGCTATCGCAGTCAACGGACAGCTTTTCTGCCAGTACATAAGCTACCTCTCCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR CCA 90 bp | GTTCAATTCCCAGCAACCACATGGCGGCTCACAACCATCTGTAAATaGGATCTGATGCCCTTTCTGATGTGCATGAAGACATCATACTCA | + |
Preference number: 1 (lower is better) Translates to: VQFPATTWRLTTICK*DLMPFLMCMKTSYS Trigger: TGAGTATGATGTCTTCATGCACATCAGAAAGGGCATCAGATCCCATTTACAGATGGTTGTGAGCCGCCATGTGGTTGCTGGGAATTGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR CCA 90 bp | CCAAGGGCCACTGATCCAAAACTTAAAAATGCTTACCCAATGGGCTaGAGAGATAGCTTAGTAGTTAAGAGCACTGGCTGCTCTTCCAGA | + |
Preference number: 1 (lower is better) Translates to: PRATDPKLKNAYPMG*RDSLVVKSTGCSSR Trigger: TCTGGAAGAGCAGCCAGTGCTCTTAACTACTAAGCTATCTCTCCAGCCCATTGGGTAAGCATTTTTAAGTTTTGGATCAGTGGCCCTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR TCA 90 bp | TTAATCCTGTCAGCAGGGAAGACCACAGAGCTAATGCCCGACATCTaGCTCAGCACTGAACATAACATGCTACGTGATTACAAGCATCAT | + |
Preference number: 1 (lower is better) Translates to: LILSAGKTTELMPDI*LSTEHNMLRDYKHH Trigger: ATGATGCTTGTAATCACGTAGCATGTTATGTTCAGTGCTGAGTCAGATGTCGGGCATTAGCTCTGTGGTCTTCCCTGCTGACAGGATTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236335.2 |
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3UTR TCA 90 bp | TCTGTACAGACTCATGTGTATCCCTGGTTCAGCGCAAACTTCTTTTaGATCCTTTCAGGCCTCAAGACCAGCCTTTTACACAAAGGGACT | + |
Preference number: 1 (lower is better) Translates to: SVQTHVYPWFSANFF*ILSGLKTSLLHKGT Trigger: AGTCCCTTTGTGTAAAAGGCTGGTCTTGAGGCCTGAAAGGATTCAAAAGAAGTTTGCGCTGAACCAGGGATACACATGAGTCTGTACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR GCA 90 bp | TGCAAGTGCACTGTCCCAACTCCTGCCAAGGCCTGGCCACATACATaGTTTTCAATGCATACAGAAGCACACTTAAGGAATAAGGATTAT | + |
Preference number: 1 (lower is better) Translates to: CKCTVPTPAKAWPHT*FSMHTEAHLRNKDY Trigger: ATAATCCTTATTCCTTAAGTGTGCTTCTGTATGCATTGAAAAGCATGTATGTGGCCAGGCCTTGGCAGGAGTTGGGACAGTGCACTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR CCA 90 bp | TGGCTTTTCTGGAAAACGTCCATGCTGTCTTCTCGGACTTGTCCTTaGGGATATCGTTCTTATCCTCATAAGCTAAGAAGTAGAGCGAGA | + |
Preference number: 1 (lower is better) Translates to: WLFWKTSMLSSRTCP*GYRSYPHKLRSRAR Trigger: TCTCGCTCTACTTCTTAGCTTATGAGGATAAGAACGATATCCCCAAGGACAAGTCCGAGAAGACAGCATGGACGTTTTCCAGAAAAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236619.2 |
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3UTR TCA 90 bp | ACGCCAGTCCTTTCATTTTCCCGTCATCAGGCTTCTTCACAAACTTaGCACCTAGTTCTTCAAATCTCTTACAGGCACTGTAGACATCAG | + |
Preference number: 1 (lower is better) Translates to: TPVLSFSRHQASSQT*HLVLQISYRHCRHQ Trigger: CTGATGTCTACAGTGCCTGTAAGAGATTTGAAGAACTAGGTGTCAAGTTTGTGAAGAAGCCTGATGACGGGAAAATGAAAGGACTGGCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024823.14 ENSMUST00000236619.2 ENSMUST00000236995.2 |
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3UTR GCA 90 bp | ATCCTTTCAGGCCTCAAGACCAGCCTTTTACACAAAGGGACTTGCTaGCCAGACCTTTATGTACTAAACAGTGTTAGCTTTATTTCAGCC | + |
Preference number: 1 (lower is better) Translates to: ILSGLKTSLLHKGTC*PDLYVLNSVSFISA Trigger: GGCTGAAATAAAGCTAACACTGTTTAGTACATAAAGGTCTGGGCAGCAAGTCCCTTTGTGTAAAAGGCTGGTCTTGAGGCCTGAAAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR GCA 90 bp | TCCCTAAGTCTAGGAAGACTGACACACGGAGGCCAAATAGTACTATaGATTCATTATACGTCTTCGTTTGCTCTGCCTAAGTTACGGCTT | + |
Preference number: 1 (lower is better) Translates to: SLSLGRLTHGGQIVL*IHYTSSFALPKLRL Trigger: AAGCCGTAACTTAGGCAGAGCAAACGAAGACGTATAATGAATGCATAGTACTATTTGGCCTCCGTGTGTCAGTCTTCCTAGACTTAGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR GCA 90 bp | TCCCCCATACCTCAAAGGCACATTCTCCCGAAACTAAATAATCGTTaGTATTTTGTTAGGATTCAGAATCTCAATCCAGTAGCCGTCAGG | + |
Preference number: 1 (lower is better) Translates to: SPIPQRHILPKLNNR*YFVRIQNLNPVAVR Trigger: CCTGACGGCTACTGGATTGAGATTCTGAATCCTAACAAAATAGCAACGATTATTTAGTTTCGGGAGAATGTGCCTTTGAGGTATGGGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000235171.2 |
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3UTR CCA 90 bp | AGCAAGTACTTCCCACCCCTAGAAATATGGTTCACATTGTTAAATTaGGTAGGTCCAGTATTAGAATCCCATTTGGTGATTCCAGCATTG | + |
Preference number: 1 (lower is better) Translates to: SKYFPPLEIWFTLLN*VGPVLESHLVIPAL Trigger: CAATGCTGGAATCACCAAATGGGATTCTAATACTGGACCTACCCAATTTAACAATGTGAACCATATTTCTAGGGGTGGGAAGTACTTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR GCA 90 bp | TCCATTAATCCTCAAAGGCACATTCTCCCGAAACTAAATAATCGTTaGTATTTTGTTAGGATTCAGAATCTCAATCCAGTAGCCGTCAGG | + |
Preference number: 1 (lower is better) Translates to: SINPQRHILPKLNNR*YFVRIQNLNPVAVR Trigger: CCTGACGGCTACTGGATTGAGATTCTGAATCCTAACAAAATAGCAACGATTATTTAGTTTCGGGAGAATGTGCCTTTGAGGATTAATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236619.2 ENSMUST00000236995.2 |
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3UTR CCA 90 bp | ATCACAGCAACTACTTATTCAAATATTCATTTTAGAACCCTCTGCTaGCCTATTCCATCAATGGGGTCTAGACACCGGTGTTTCAATAAA | + |
Preference number: 1 (lower is better) Translates to: ITATTYSNIHFRTLC*PIPSMGSRHRCFNK Trigger: TTTATTGAAACACCGGTGTCTAGACCCCATTGATGGAATAGGCCAGCAGAGGGTTCTAAAATGAATATTTGAATAAGTAGTTGCTGTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR GCA 90 bp | AAAATTAGTATTTCTATCTGTGTCCTTGTCAGCATGATTCCGAATTaGTCTCAGGAGTACCTTCTCTTTTGTAAGATAAACACTATGCTG | + |
Preference number: 1 (lower is better) Translates to: KISISICVLVSMIPN*SQEYLLFCKINTML Trigger: CAGCATAGTGTTTATCTTACAAAAGAGAAGGTACTCCTGAGAGCAATTCGGAATCATGCTGACAAGGACACAGATAGAAATACTAATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236335.2 |
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3UTR GCA 90 bp | TTGGTGTTACTGCTCAACTGTCCGTTACTAACGTGTTCCATTAGTTaGCTCGAAATTCTAAGTATGCAATTTAGCAAAACACTACATAAA | + |
Preference number: 1 (lower is better) Translates to: LVLLLNCPLLTCSIS*LEILSMQFSKTLHK Trigger: TTTATGTAGTGTTTTGCTAAATTGCATACTTAGAATTTCGAGGCAACTAATGGAACACGTTAGTAACGGACAGTTGAGCAGTAACACCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR-3UTR CCA 90 bp | GCTTGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCTCAGCCGGGTGGTGGTaGCGGTGGTGCACGCCTCTA | + |
Preference number: 2 (lower is better) Translates to: AWHCPRPSSTAAGRKLRCSAGWW*RWCTPL Trigger: TAGAGGCGTGCACCACCGCCACCACCACCCGGCTGA...GCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236995.2 |
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3UTR-3UTR CCA 90 bp | GTAGCGCTTGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGATCATTCAGCCGGGTaGTGGTGGCGGTGGTGCACG | + |
Preference number: 2 (lower is better) Translates to: VALGIAHARLPLQQAGNFDHSAG*WWRWCT Trigger: CGTGCACCACCGCCACCACCACCCGGCTGAATGATC...GAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAAGCGCTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236995.2 |
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3UTR-3UTR CCA 90 bp | GCAGAAAGCCTGCCCGGCATGTTAAAGGCCTTGGGCTCTAACCCTGTCCCTACACATTCAGCCGGGTGGTaGTGGCGGTGGTGCACGCCT | + |
Preference number: 2 (lower is better) Translates to: AESLPGMLKALGSNPVPTHSAGW*WRWCTP Trigger: AGGCGTGCACCACCGCCACCACCACCCGGCTGAATG...TGTAGGGACAGGGTTAGAGCCCAAGGCCTTTAACATGCCGGGCAGGCTTTCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236995.2 |
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3UTR-3UTR TCA 90 bp | CTGTGTAGCGCTTGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAAAGCCTGGTCTACAAGTaGGTTCCAGGACAGCCAGGG | + |
Preference number: 2 (lower is better) Translates to: LCSAWHCPRPSSTAAGRKSLVYK*VPGQPG Trigger: CCCTGGCTGTCCTGGAACTCACTTGTAGACCAGGCT...TTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAAGCGCTACACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236995.2 |
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3UTR-3UTR CCA 90 bp | GCAGAAAGCCTGCCCGGCATGTTAAAGGCCTTGGGCTCTAACCCTGTCCCTACATCTAATCCCAGCACTTaGGAGGCAGAGGCAGGCGAG | + |
Preference number: 2 (lower is better) Translates to: AESLPGMLKALGSNPVPTSNPST*EAEAGE Trigger: CTCGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAGA...TGTAGGGACAGGGTTAGAGCCCAAGGCCTTTAACATGCCGGGCAGGCTTTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236995.2 |
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3UTR-3UTR CCA 90 bp | CTGTGTAGCGCTTGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAATTGCAAACCACAGTGTaGGTGCTGGGAACCAAGCAC | + |
Preference number: 2 (lower is better) Translates to: LCSAWHCPRPSSTAAGRKLQTTV*VLGTKH Trigger: GTGCTTGGTTCCCAGCACCCACACTGTGGTTTGCAA...TTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAAGCGCTACACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236995.2 |
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3UTR-3UTR CCA 90 bp | TTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTGACCAGGAGGATTTGAACTaGAGCAGAGAGACCCATCAG | + |
Preference number: 2 (lower is better) Translates to: LPTPVFHCSRQETSLQSDQEDLN*SRETHQ Trigger: CTGATGGGTCTCTCTGCTCCAGTTCAAATCCTCCTG...GTCAGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236335.2 |
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3UTR-3UTR CCA 90 bp | CTCCAGGCTATCTGGCCTGCCAGCTTCCGGGCCATTCACCTGTCTCTACCTCCCTTGGCTGCAGAGCCTTaGAAAACACTTTCAGCCCTT | + |
Preference number: 2 (lower is better) Translates to: LQAIWPASFRAIHLSLPPLAAEP*KTLSAL Trigger: AAGGGCTGAAAGTGTTTTCCAAGGCTCTGCAGCCAA...GGGAGGTAGAGACAGGTGAATGGCCCGGAAGCTGGCAGGCCAGATAGCCTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR CAA 90 bp | GATCTCGTTACGGATGGTTGTGAACCACCATGTGGTTCCTGGGATTaGAACTCCAGACCTTCGGAAGAGCAGTCAGGTGCTCTGACCCAC | + |
Preference number: 2 (lower is better) Translates to: DLVTDGCEPPCGSWD*NSRPSEEQSGALTH Trigger: GTGGGTCAGAGCACCTGACTGCTCTTCCGAAGGTCTGGAGTTCAAATCCCAGGAACCACATGGTGGTTCACAACCATCCGTAACGAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR-3UTR TCA 90 bp | CTCAGTAGGGCAGGAGGTACCATGAGGCATAGGCATAACCCAGCTACTAGAAACACGGCAATCCCAATGTaGCCAAATCCACGAGGGTCC | + |
Preference number: 2 (lower is better) Translates to: LSRAGGTMRHRHNPATRNTAIPM*PNPRGS Trigger: GGACCCTCGTGGATTTGGTCACATTGGGATTGCCGT...GTTTCTAGTAGCTGGGTTATGCCTATGCCTCATGGTACCTCCTGCCCTACTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024823.14 |
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3UTR-3UTR TCA 90 bp | TTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTGACACTGAATCAGGACAATaGAAAGGGTTTCAGGAGGAT | + |
Preference number: 2 (lower is better) Translates to: LPTPVFHCSRQETSLQSDTESGQ*KGFQED Trigger: ATCCTCCTGAAACCCTTTTCATTGTCCTGATTCAGT...GTCAGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236335.2 |
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3UTR-3UTR CCA 90 bp | CGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTGACCTCAAATCAAGGGTGGCTTTTCTaGAAAACGTCCATGCTGTCT | + |
Preference number: 2 (lower is better) Translates to: RPSSTAAGRKLRCSLTSNQGWLF*KTSMLS Trigger: AGACAGCATGGACGTTTTCCAGAAAAGCCACCCTTG...ATTTGAGGTCAGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236619.2 |
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3UTR CAA 90 bp | GTGACAGGGACCGTAGGTCGGGATCAGACACAAGGACACCTGTCCTaGGTTCTAAGTACAGAGTTCCTCCTCTCACTCTTCCTCCACTTA | + |
Preference number: 2 (lower is better) Translates to: VTGTVGRDQTQGHLS*VLSTEFLLSLFLHL Trigger: TAAGTGGAGGAAGAGTGAGAGGAGGAACTCTGTACTTAGAACCAAGGACAGGTGTCCTTGTGTCTGATCCCGACCTACGGTCCCTGTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR-3UTR TCA 90 bp | CCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTGACCTCTCTTCAAATCACCTCTaGGAATCCATTAATCCTCAA | + |
Preference number: 2 (lower is better) Translates to: PTPVFHCSRQETSLQSDLSSNHL*ESINPQ Trigger: TTGAGGATTAATGGATTCTCAGAGGTGATTTGAAGA...GAGGTCAGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000167624.2 ENSMUST00000235547.2 ENSMUST00000236619.2 ENSMUST00000236995.2 |
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3UTR-3UTR TCA 90 bp | AGCTGTGTAGCGCTTGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGATCTTCAAATCACCTCTaGGAATCCATTAATCCTCAA | + |
Preference number: 2 (lower is better) Translates to: SCVALGIAHARLPLQQAGSSNHL*ESINPQ Trigger: TTGAGGATTAATGGATTCTCAGAGGTGATTTGAAGA...TCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAAGCGCTACACAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000167624.2 ENSMUST00000235547.2 ENSMUST00000236619.2 ENSMUST00000236995.2 |
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3UTR-3UTR GCA 90 bp | GCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTCTCATTTCTGTTCACTaGTCTGTACTTCCCATTATG | + |
Preference number: 2 (lower is better) Translates to: ALPTPVFHCSRQETSLQSLISVH*SVLPIM Trigger: CATAATGGGAAGTACAGAGCAGTGAACAGAAATGAG...AGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236335.2 |
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3UTR-3UTR GCA 90 bp | GTGATGGAGTCAAGATCTACCTGGAGTCAGCTCCTTTTTAATCTCACCCTGCATGCCAGGAAGAAAGACTaGCCCTGGTATGACTTCCCG | + |
Preference number: 2 (lower is better) Translates to: VMESRSTWSQLLFNLTLHARKKD*PWYDFP Trigger: CGGGAAGTCATACCAGGGGCAGTCTTTCTTCCTGGC...ATGCAGGGTGAGATTAAAAAGGAGCTGACTCCAGGTAGATCTTGACTCCATCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR-3UTR CCA 90 bp | CAAAGCCCCTTGGCTTTCAGTTACTGCCATTTCCTCTTCCCCATGATGACTGTTAGCCCTTGGCTGTCCTaGAACTTGCTCTGTAGACCA | + |
Preference number: 2 (lower is better) Translates to: QSPLAFSYCHFLFPMMTVSPWLS*NLLCRP Trigger: TGGTCTACAGAGCAAGTTCCAGGACAGCCAAGGGCT...AACAGTCATCATGGGGAAGAGGAAATGGCAGTAACTGAAAGCCAAGGGGCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR CAA 90 bp | TTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTGACCTCAAATaGGGTTTTGTCCTCCAGTTGTTGAGTCTTCAAATCACCTCTGAG | + |
Preference number: 2 (lower is better) Translates to: FHCSRQETSLQSDLK*GFVLQLLSLQITSE Trigger: CTCAGAGGTGATTTGAAGACTCAACAACTGGAGGACAAAACCCAATTTGAGGTCAGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024823.14 ENSMUST00000167624.2 ENSMUST00000235547.2 ENSMUST00000236335.2 ENSMUST00000236619.2 ENSMUST00000236995.2 |
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3UTR CAA 90 bp | TTTCTGCTTTTGCAGAAAACCAGAGTTGAGTTCCCAGGACCCACATaGGGCAGCTCACACGCTATCTACCACTTGACTATGGCCTTCACA | + |
Preference number: 2 (lower is better) Translates to: FLLLQKTRVEFPGPT*GSSHAIYHLTMAFT Trigger: TGTGAAGGCCATAGTCAAGTGGTAGATAGCGTGTGAGCTGCCCAATGTGGGTCCTGGGAACTCAACTCTGGTTTTCTGCAAAAGCAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR-3UTR TCA 90 bp | ACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTGACCTCAAATCTTCAAATCACCTCTaGGAATCCATTAATCCTCAA | + |
Preference number: 2 (lower is better) Translates to: TPVFHCSRQETSLQSDLKSSNHL*ESINPQ Trigger: TTGAGGATTAATGGATTCTCAGAGGTGATTTGAAGA...TTTGAGGTCAGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000167624.2 ENSMUST00000235547.2 ENSMUST00000236619.2 ENSMUST00000236995.2 |
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3UTR-3UTR GCA 90 bp | CAGTCTGACCTCAAATTGGGTTTTGTCCTCCAGTTGTTGAGTCTTCAAATCACCCACGAGGGTCCGAGTTaGCGTTGTGGTAACTCTGAG | + |
Preference number: 2 (lower is better) Translates to: QSDLKLGFVLQLLSLQITHEGPS*RCGNSE Trigger: CTCAGAGTTACCACAACGGCAACTCGGACCCTCGTG...GGTGATTTGAAGACTCAACAACTGGAGGACAAAACCCAATTTGAGGTCAGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236619.2 |
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3UTR-3UTR GCA 90 bp | CAGTCTGACCTCAAATTGGGTTTTGTCCTCCAGTTGTTGAGTCTTCAAATCACCAAACCACAGTGTGGGTaGTGGGAACCAAGCACGGGT | + |
Preference number: 2 (lower is better) Translates to: QSDLKLGFVLQLLSLQITKPQCG*WEPSTG Trigger: ACCCGTGCTTGGTTCCCAGCACCCACACTGTGGTTT...GGTGATTTGAAGACTCAACAACTGGAGGACAAAACCCAATTTGAGGTCAGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236995.2 |
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3UTR-3UTR GCA 90 bp | GTGATGGAGTCAAGATCTACCTGGAGTCAGCTCCTTTTTAATCTCACCCTGCATAATCTGCTGAGTGTCTaGCAGGAAGAAAGACTGCCC | + |
Preference number: 2 (lower is better) Translates to: VMESRSTWSQLLFNLTLHNLLSV*QEERLP Trigger: GGGCAGTCTTTCTTCCTGGCAGACACTCAGCAGATT...ATGCAGGGTGAGATTAAAAAGGAGCTGACTCCAGGTAGATCTTGACTCCATCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR-3UTR CCA 90 bp | CCCAGAACAACCAGGCTGAGTGACCACATACTGAAAACTATGAAACATCTCTGGGCCCACTCCCCAAAATaGTACTTGGAAATGAGCTCC | + |
Preference number: 2 (lower is better) Translates to: PRTTRLSDHILKTMKHLWAHSPK*YLEMSS Trigger: GGAGCTCATTTCCAAGTACCATTTTGGGGAGTGGGC...CCAGAGATGTTTCATAGTTTTCAGTATGTGGTCACTCAGCCTGGTTGTTCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR CAA 90 bp | GTCTGTACAGACTCATGTGTATCCCTGGTTCAGCGCAAACTTCTTTaGAATCCTTTCAGGCCTCAAGACCAGCCTTTTACACAAAGGGAC | + |
Preference number: 2 (lower is better) Translates to: VCTDSCVSLVQRKLL*NPFRPQDQPFTQRD Trigger: GTCCCTTTGTGTAAAAGGCTGGTCTTGAGGCCTGAAAGGATTCAAAAGAAGTTTGCGCTGAACCAGGGATACACATGAGTCTGTACAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR-3UTR TCA 90 bp | TCTAATCCCTTCCTCCTCCGTATTCCCAGAAAAGTAAAGTTAGTCCTTGAATTCGGTTTCAGGAGGATTTaGACTGGAGCAGAGAGACCC | + |
Preference number: 2 (lower is better) Translates to: SNPFLLRIPRKVKLVLEFGFRRI*TGAERP Trigger: GGGTCTCTCTGCTCCAGTTCAAATCCTCCTGAAACC...GAATTCAAGGACTAACTTTACTTTTCTGGGAATACGGAGGAGGAAGGGATTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236335.2 |
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3UTR CAA 90 bp | ACTAGAAACACTGACCGCCCAAGCCTTCAGACCAATCAGGTGGCTTaGTCTGTCGTAACCACAGTACTCATTATTTACATAAAGGATGCT | + |
Preference number: 2 (lower is better) Translates to: TRNTDRPSLQTNQVA*SVVTTVLIIYIKDA Trigger: AGCATCCTTTATGTAAATAATGAGTACTGTGGTTACGACAGACAAAGCCACCTGATTGGTCTGAAGGCTTGGGCGGTCAGTGTTTCTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236335.2 |
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3UTR CAA 90 bp | AAAGTGAAAGGCGGTTCTCCATGTGGGAAAATAAGCTTATCAGTCTaGTTCCCTAAGTCTAGGAAGACTGACACACGGAGGCCAAATAGT | + |
Preference number: 2 (lower is better) Translates to: KVKGGSPCGKISLSV*FPKSRKTDTRRPNS Trigger: ACTATTTGGCCTCCGTGTGTCAGTCTTCCTAGACTTAGGGAACAAGACTGATAAGCTTATTTTCCCACATGGAGAACCGCCTTTCACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR-3UTR TCA 90 bp | ATGGCAAAAGTGAAAGGCGGTTCTCCATGTGGGAAAATAAGCTTATCAGTCTTGCTTCTAACAGCATCTTaGGAACAAAGGTCCCTCCAC | + |
Preference number: 2 (lower is better) Translates to: MAKVKGGSPCGKISLSVLLLTAS*EQRSLH Trigger: GTGGAGGGACCTTTGTTCTCAAGATGCTGTTAGAAG...CAAGACTGATAAGCTTATTTTCCCACATGGAGAACCGCCTTTCACTTTTGCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR-3UTR TCA 90 bp | TTTGCTCGCTACCATCCTGTCCGTTCTTCTTCTGAAGATCATAATTTTTCTCAAACAGTGGCCTCGGGATaGGAGCATTTCACCTGCATT | + |
Preference number: 2 (lower is better) Translates to: FARYHPVRSSSEDHNFSQTVASG*EHFTCI Trigger: AATGCAGGTGAAATGCTCTCATCCCGAGGCCACTGT...TTGAGAAAAATTATGATCTTCAGAAGAAGAACGGACAGGATGGTAGCGAGCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR-3UTR CCA 90 bp | CCGTCATCAGGCTTCTTCACAAACTTGACACCTAGTTCTTCAAATCTCTTACAGCAAGGGTGGCTTTTCTaGAAAACGTCCATGCTGTCT | + |
Preference number: 2 (lower is better) Translates to: PSSGFFTNLTPSSSNLLQQGWLF*KTSMLS Trigger: AGACAGCATGGACGTTTTCCAGAAAAGCCACCCTTG...CTGTAAGAGATTTGAAGAACTAGGTGTCAAGTTTGTGAAGAAGCCTGATGACGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236619.2 |
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3UTR-3UTR CCA 90 bp | AAAGGTCATGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCATAAGTCTGACCTCAAATTaGGTTTTGTCCTCCAGTTGT | + |
Preference number: 2 (lower is better) Translates to: KGHEFKSQQPHGGSQPSISLTSN*VLSSSC Trigger: ACAACTGGAGGACAAAACCCAATTTGAGGTCAGACT...TATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCATGACCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR CAA 90 bp | TATTTTGTTAGGATTCAGAATCTCAATCCAGTAGCCGTCAGGGTCTaGAATGAACGCCAGTCCTTTCATTTTCCCGTCATCAGGCTTCTT | + |
Preference number: 2 (lower is better) Translates to: YFVRIQNLNPVAVRV*NERQSFHFPVIRLL Trigger: AAGAAGCCTGATGACGGGAAAATGAAAGGACTGGCGTTCATTCAAGACCCTGACGGCTACTGGATTGAGATTCTGAATCCTAACAAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000024823.14 ENSMUST00000235171.2 ENSMUST00000236619.2 ENSMUST00000236995.2 |
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3UTR CAA 90 bp | AGATTGGCAAGATATAAAAATATCCACGTCCCTAATAAGCTATACTaGAAAATTAGATCATTCAGCCGGGTGGTGGTGGCGGTGGTGCAC | + |
Preference number: 2 (lower is better) Translates to: RLARYKNIHVPNKLY*KIRSFSRVVVAVVH Trigger: GTGCACCACCGCCACCACCACCCGGCTGAATGATCTAATTTTCAAGTATAGCTTATTAGGGACGTGGATATTTTTATATCTTGCCAATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236995.2 |
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3UTR-3UTR CCA 90 bp | TGCTACAGCATGGCCCATTGTCTAATCCCTTCCTCCTCCGTATTCCCAGAAAAGCTGTACTTCCCATTATaGAAAGTTATTTCTGAGGAA | + |
Preference number: 2 (lower is better) Translates to: CYSMAHCLIPSSSVFPEKLYFPL*KVISEE Trigger: TTCCTCAGAAATAACTTTCCATAATGGGAAGTACAG...CTTTTCTGGGAATACGGAGGAGGAAGGGATTAGACAATGGGCCATGCTGTAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236335.2 |
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3UTR-3UTR TCA 90 bp | CAGTCTGACCTCAAATTGGGTTTTGTCCTCCAGTTGTTGAGTCTTCAAATCACCATGGAAAGTTATTTCTaGGGAACTGAAACCCCAGAA | + |
Preference number: 2 (lower is better) Translates to: QSDLKLGFVLQLLSLQITMESYF*GTETPE Trigger: TTCTGGGGTTTCAGTTCCTCAGAAATAACTTTCCAT...GGTGATTTGAAGACTCAACAACTGGAGGACAAAACCCAATTTGAGGTCAGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236335.2 |
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3UTR-3UTR TCA 90 bp | ATTCAGAATCTCAATCCAGTAGCCGTCAGGGTCTTGAATGAACGCCAGTCCTTTTCTTCAAATCACCTCTaGGAATCCATTAATCCTCAA | + |
Preference number: 2 (lower is better) Translates to: IQNLNPVAVRVLNERQSFSSNHL*ESINPQ Trigger: TTGAGGATTAATGGATTCTCAGAGGTGATTTGAAGA...AAAGGACTGGCGTTCATTCAAGACCCTGACGGCTACTGGATTGAGATTCTGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236619.2 ENSMUST00000236995.2 |
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3UTR-3UTR TCA 90 bp | GAAACTAGAATCAGAAATCTTAAGAAAGACCAGTGGTTTCAGCGGAGCAGTACTATCTGGTCTTTCTCCTaGATGTACTTCATTCCCCCA | + |
Preference number: 2 (lower is better) Translates to: ETRIRNLKKDQWFQRSSTIWSFS*MYFIPP Trigger: TGGGGGAATGAAGTACATTCAGGAGAAAGACCAGAT...AGTACTGCTCCGCTGAAACCACTGGTCTTTCTTAAGATTTCTGATTCTAGTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR-3UTR CCA 90 bp | CCCAGAACAACCAGGCTGAGTGACCACATACTGAAAACTATGAAACATCTCTGGCCACCCCTAGAAATATaGTTCACATTGTTAAATTGG | + |
Preference number: 2 (lower is better) Translates to: PRTTRLSDHILKTMKHLWPPLEI*FTLLNW Trigger: CCAATTTAACAATGTGAACCATATTTCTAGGGGTGG...CCAGAGATGTTTCATAGTTTTCAGTATGTGGTCACTCAGCCTGGTTGTTCTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR-3UTR TCA 90 bp | ACTCATTATTTACATAAAGGATGCTACAGCATGGCCCATTGTCTAATCCCTTCCACTGAATCAGGACAATaGAAAGGGTTTCAGGAGGAT | + |
Preference number: 2 (lower is better) Translates to: THYLHKGCYSMAHCLIPSTESGQ*KGFQED Trigger: ATCCTCCTGAAACCCTTTTCATTGTCCTGATTCAGT...GGAAGGGATTAGACAATGGGCCATGCTGTAGCATCCTTTATGTAAATAATGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236335.2 |
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3UTR-3UTR CCA 90 bp | GAAACTAGAATCAGAAATCTTAAGAAAGACCAGTGGTTTCAGCGGAGCAGTACTGTAAGGAGATCAATTTaGCTGCAGAGCCTTGGAAAA | + |
Preference number: 2 (lower is better) Translates to: ETRIRNLKKDQWFQRSSTVRRSI*LQSLGK Trigger: TTTTCCAAGGCTCTGCAGCCAAATTGATCTCCTTAC...AGTACTGCTCCGCTGAAACCACTGGTCTTTCTTAAGATTTCTGATTCTAGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR CAA 90 bp | CCACATAGGGTGGTTAGTATTGATTTCAAACCTAGTTTACTCCTATaGATATTTTTGCTCGCTACCATCCTGTCCGTTCTTCTTCTGAAG | + |
Preference number: 2 (lower is better) Translates to: PHRVVSIDFKPSLLL*IFLLATILSVLLLK Trigger: CTTCAGAAGAAGAACGGACAGGATGGTAGCGAGCAAAAATATCAATAGGAGTAAACTAGGTTTGAAATCAATACTAACCACCCTATGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR-3UTR GCA 90 bp | GAAACTAGAATCAGAAATCTTAAGAAAGACCAGTGGTTTCAGCGGAGCAGTACTTATTTACATAAAGGATaGTACAGCATGGCCCATTGT | + |
Preference number: 2 (lower is better) Translates to: ETRIRNLKKDQWFQRSSTYLHKG*YSMAHC Trigger: ACAATGGGCCATGCTGTAGCATCCTTTATGTAAATA...AGTACTGCTCCGCTGAAACCACTGGTCTTTCTTAAGATTTCTGATTCTAGTTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR CAA 90 bp | GTGTTGTATCCCCAGCCTTGTTCTACACAGACATTTAATATGATTTaGTGCCCCCAATCATGCTCTGAACACTCCATTAAATCTTTATAT | + |
Preference number: 2 (lower is better) Translates to: VLYPQPCSTQTFNMI*CPQSCSEHSIKSLY Trigger: ATATAAAGATTTAATGGAGTGTTCAGAGCATGATTGGGGGCACAAAATCATATTAAATGTCTGTGTAGAACAAGGCTGGGGATACAACAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR-3UTR TCA 90 bp | TGCTCTCAGGAGTACCTTCTCTTTTGTAAGATAAACACTATGCTGTTTGAAGTAGCTTCTTCACAAACTTaGCACCTAGTTCTTCAAATC | + |
Preference number: 2 (lower is better) Translates to: CSQEYLLFCKINTMLFEVASSQT*HLVLQI Trigger: GATTTGAAGAACTAGGTGTCAAGTTTGTGAAGAAGC...TACTTCAAACAGCATAGTGTTTATCTTACAAAAGAGAAGGTACTCCTGAGAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024823.14 |
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3UTR GCA 72 bp | AGGCTCCGCCCACAGTTACCTGGCAACAGCCAGGTGTaGCTGACTCACACCCCCTCCTCTCTTGCTCCCTTC | + |
Preference number: 3 (lower is better) Translates to: RLRPQLPGNSQV*LTHTPSSLAPF Trigger: GAAGGGAGCAAGAGAGGAGGGGGTGTGAGTCAGGCACACCTGGCTGTTGCCAGGTAACTGTGGGCGGAGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR CCA 72 bp | GCACATGTCATCTGTCACCCTGATACTGAGCATGGCTaGAGAGAGGTGGATCCCAGGGGCTCCGTGGCCAGC | + |
Preference number: 3 (lower is better) Translates to: AHVICHPDTEHG*REVDPRGSVAS Trigger: GCTGGCCACGGAGCCCCTGGGATCCACCTCTCTCCAGCCATGCTCAGTATCAGGGTGACAGATGACATGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR-3UTR CAA 90 bp | GCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTTCTTCAGTGCCCCAGTaGTGCGTGAGCTCAAGGGTG | + |
Preference number: 3 (lower is better) Translates to: ALPTPVFHCSRQETSLQSSSVPQ*CVSSRV Trigger: CACCCTTGAGCTCACGCACAACTGGGGCACTGAAGA...AGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236619.2 |
||
3UTR TCA 72 bp | AGACCTTCGGAAGAGCAGTCAGGTGCTCTGACCCACTaGGCCGTCTCACCAGCCCCACCACTTGGGAACTTG | + |
Preference number: 3 (lower is better) Translates to: RPSEEQSGALTH*AVSPAPPLGNL Trigger: CAAGTTCCCAAGTGGTGGGGCTGGTGAGACGGCTCAGTGGGTCAGAGCACCTGACTGCTCTTCCGAAGGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR GCA 72 bp | GGATTTGAACTCCAGACCTTCGGAAGAGCAGTCAGGTaGTCTGACCCACTGAGCCGTCTCACCAGCCCCACC | + |
Preference number: 3 (lower is better) Translates to: GFELQTFGRAVR*SDPLSRLTSPT Trigger: GGTGGGGCTGGTGAGACGGCTCAGTGGGTCAGAGCACCTGACTGCTCTTCCGAAGGTCTGGAGTTCAAATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR GCA 72 bp | CAACTTCCCCTACTGTGTGCTCCAGGCTATCTGGCCTaGCAGCTTCCGGGCCATTCACCTGTCTCTACCTCC | + |
Preference number: 3 (lower is better) Translates to: QLPLLCAPGYLA*QLPGHSPVSTS Trigger: GGAGGTAGAGACAGGTGAATGGCCCGGAAGCTGGCAGGCCAGATAGCCTGGAGCACACAGTAGGGGAAGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR-3UTR CAA 90 bp | GCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTCTACAGCATGGCCCATaGTCTAATCCCTTCCTCCTC | + |
Preference number: 3 (lower is better) Translates to: ALPTPVFHCSRQETSLQSLQHGP*SNPFLL Trigger: GAGGAGGAAGGGATTAGACAATGGGCCATGCTGTAG...AGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236335.2 |
||
3UTR-3UTR CAA 90 bp | CTCCAGGCTATCTGGCCTGCCAGCTTCCGGGCCATTCACCTGTCTCTACCTCCCGCTTCTGGACACAGCTaGAGGAAGTTAGCAGTACAC | + |
Preference number: 3 (lower is better) Translates to: LQAIWPASFRAIHLSLPPASGHS*RKLAVH Trigger: GTGTACTGCTAACTTCCTCAAGCTGTGTCCAGAAGC...GGGAGGTAGAGACAGGTGAATGGCCCGGAAGCTGGCAGGCCAGATAGCCTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR GCA 72 bp | ATATCCATTCAAGCAGCTAGACCATGGGCCCCGCAGTaGCAGGCAGGAACCTTGAAGCTTTGGCCTGGGAGG | + |
Preference number: 3 (lower is better) Translates to: ISIQAARPWAPQ*QAGTLKLWPGR Trigger: CCTCCCAGGCCAAAGCTTCAAGGTTCCTGCCTGGCACTGCGGGGCCCATGGTCTAGCTGCTTGAATGGATAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR GCA 72 bp | GCAGTGCTCATTTACCAGGGATCCCATTCAGTGTCCTaGTCTGGCTCCTACCCACCCGCAGTTGGTGCTTCC | + |
Preference number: 3 (lower is better) Translates to: AVLIYQGSHSVS*SGSYPPAVGAS Trigger: GGAAGCACCAACTGCGGGTGGGTAGGAGCCAGAGCAGGACACTGAATGGGATCCCTGGTAAATGAGCACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR GCA 72 bp | AAATTAGATCATTCAGCCGGGTGGTGGTGGCGGTGGTaGACGCCTCTAATCCCAGCACTTGGGAGGCAGAGG | + |
Preference number: 3 (lower is better) Translates to: KLDHSAGWWWRW*TPLIPALGRQR Trigger: CCTCTGCCTCCCAAGTGCTGGGATTAGAGGCGTGCACCACCGCCACCACCACCCGGCTGAATGATCTAATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236995.2 |
||
3UTR CCA 72 bp | ATGGGCAACTTCCCCTACTGTGTGCTCCAGGCTATCTaGCCTGCCAGCTTCCGGGCCATTCACCTGTCTCTA | + |
Preference number: 3 (lower is better) Translates to: MGNFPYCVLQAI*PASFRAIHLSL Trigger: TAGAGACAGGTGAATGGCCCGGAAGCTGGCAGGCCAGATAGCCTGGAGCACACAGTAGGGGAAGTTGCCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR TCA 72 bp | CTGAGTGTCTGCCAGGAAGAAAGACTGCCCCTGGTATaGCTTCCCGGGGCAGTGCTCATTTACCAGGGATCC | + |
Preference number: 3 (lower is better) Translates to: LSVCQEERLPLV*LPGAVLIYQGS Trigger: GGATCCCTGGTAAATGAGCACTGCCCCGGGAAGTCATACCAGGGGCAGTCTTTCTTCCTGGCAGACACTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR CCA 72 bp | GCTCATTTACCAGGGATCCCATTCAGTGTCCTGCTCTaGCTCCTACCCACCCGCAGTTGGTGCTTCCTGTTC | + |
Preference number: 3 (lower is better) Translates to: AHLPGIPFSVLL*LLPTRSWCFLF Trigger: GAACAGGAAGCACCAACTGCGGGTGGGTAGGAGCCAGAGCAGGACACTGAATGGGATCCCTGGTAAATGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR GCA 72 bp | GTCCCCAACCCCCAGCCTGTTCTTCCCACCGCTACTTaGCAGGTAAGTGTATTTGCAAGTGCACTGTCCCAA | + |
Preference number: 3 (lower is better) Translates to: VPNPQPVLPTAT*QVSVFASALSQ Trigger: TTGGGACAGTGCACTTGCAAATACACTTACCTGGCAAGTAGCGGTGGGAAGAACAGGCTGGGGGTTGGGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR GCA 72 bp | GTCAAGAGGACCCTTGCCAGACACTGCAAAGGCTGCTaGTTCATAAGAAGTTGCAGCCTGCCGGGCGGTATT | + |
Preference number: 3 (lower is better) Translates to: VKRTLARHCKGC*FIRSCSLPGGI Trigger: AATACCGCCCGGCAGGCTGCAACTTCTTATGAAGCAGCAGCCTTTGCAGTGTCTGGCAAGGGTCCTCTTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR-3UTR CAA 90 bp | CTCCAGGCTATCTGGCCTGCCAGCTTCCGGGCCATTCACCTGTCTCTACCTCCCTTTTTCAAACATGGGTaGCAGCTTGCATGGTTAGTG | + |
Preference number: 3 (lower is better) Translates to: LQAIWPASFRAIHLSLPPFFKHG*QLAWLV Trigger: CACTAACCATGCAAGCTGCAACCCATGTTTGAAAAA...GGGAGGTAGAGACAGGTGAATGGCCCGGAAGCTGGCAGGCCAGATAGCCTGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR TCA 72 bp | CTGTGCTTCTTTCTCTGTGGTATTCAAGCCCAAGTGTaGGCAGAGAGCATAGGCCAGACTCCCGGCAGGTTC | + |
Preference number: 3 (lower is better) Translates to: LCFFLCGIQAQV*AESIGQTPGRF Trigger: GAACCTGCCGGGAGTCTGGCCTATGCTCTCTGCTCACACTTGGGCTTGAATACCACAGAGAAAGAAGCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236335.2 |
||
3UTR TCA 72 bp | ATCCCAGCACTCAAGAGGCAGAGGCAGGCTGATTTCTaGGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTC | + |
Preference number: 3 (lower is better) Translates to: IPALKRQRQADF*VRGQPGLQSEF Trigger: GAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCAGCCTGCCTCTGCCTCTTGAGTGCTGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR TCA 72 bp | CGGATGGTTGTGAACCACCATGTGGTTCCTGGGATTTaGACTCCAGACCTTCGGAAGAGCAGTCAGGTGCTC | + |
Preference number: 3 (lower is better) Translates to: RMVVNHHVVPGI*TPDLRKSSQVL Trigger: GAGCACCTGACTGCTCTTCCGAAGGTCTGGAGTTCAAATCCCAGGAACCACATGGTGGTTCACAACCATCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR TCA 72 bp | GACCCACATTGGGCAGCTCACACGCTATCTACCACTTaGCTATGGCCTTCACAGGCACCTACACACATGCAC | + |
Preference number: 3 (lower is better) Translates to: DPHWAAHTLSTT*LWPSQAPTHMH Trigger: GTGCATGTGTGTAGGTGCCTGTGAAGGCCATAGTCAAGTGGTAGATAGCGTGTGAGCTGCCCAATGTGGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR GCA 72 bp | TGTTCTTCCCACCGCTACTTGCCAGGTAAGTGTATTTaGAAGTGCACTGTCCCAACTCCTGCCAAGGCCTGG | + |
Preference number: 3 (lower is better) Translates to: CSSHRYLPGKCI*KCTVPTPAKAW Trigger: CCAGGCCTTGGCAGGAGTTGGGACAGTGCACTTGCAAATACACTTACCTGGCAAGTAGCGGTGGGAAGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR GCA 72 bp | GCCTGTCCACAAGTCAAGAGGACCCTTGCCAGACACTaGAAAGGCTGCTGCTTCATAAGAAGTTGCAGCCTG | + |
Preference number: 3 (lower is better) Translates to: ACPQVKRTLARH*KGCCFIRSCSL Trigger: CAGGCTGCAACTTCTTATGAAGCAGCAGCCTTTGCAGTGTCTGGCAAGGGTCCTCTTGACTTGTGGACAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR CCA 72 bp | ACTGGAGCAGAGAGACCCATCAGTCCCCAACGCTTCTaGTCGCCGCAGCATCTTGAATCACGCTGTTTCTTT | + |
Preference number: 3 (lower is better) Translates to: TGAERPISPQRF*SPQHLESRCFF Trigger: AAAGAAACAGCGTGATTCAAGATGCTGCGGCGACCAGAAGCGTTGGGGACTGATGGGTCTCTCTGCTCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024823.14 ENSMUST00000235171.2 ENSMUST00000236335.2 |
||
3UTR-3UTR CAA 90 bp | TTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTGACTTTGTCCTCCAGTTGTaGAGTCTTCAAATCACCTCT | + |
Preference number: 3 (lower is better) Translates to: LPTPVFHCSRQETSLQSDFVLQL*SLQITS Trigger: AGAGGTGATTTGAAGACTCAACAACTGGAGGACAAA...GTCAGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000024823.14 ENSMUST00000167624.2 ENSMUST00000235547.2 ENSMUST00000236335.2 ENSMUST00000236619.2 ENSMUST00000236995.2 |
||
3UTR TCA 72 bp | CCTGTGAGGAAGAATCGCCGCAGATCCACCCTTCAGTaGTGGAGTCAAGATCTACCTGGAGTCAGCTCCTTT | + |
Preference number: 3 (lower is better) Translates to: PVRKNRRRSTLQ*WSQDLPGVSSF Trigger: AAAGGAGCTGACTCCAGGTAGATCTTGACTCCATCACTGAAGGGTGGATCTGCGGCGATTCTTCCTCACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR GCA 72 bp | TGTAGACCAGGCTGGCCTCAAACTCAGAAATCCACCTaGCTCTGCCTCCCAATTGCTGGGATTAAAGGCGTT | + |
Preference number: 3 (lower is better) Translates to: CRPGWPQTQKST*LCLPIAGIKGV Trigger: AACGCCTTTAATCCCAGCAATTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR GCA 72 bp | ACTAGAATCCTGGATGGTTGCAAACCACAGTGTGGGTaGTGGGAACCAAGCACGGGTCTGCTACAAGAACAG | + |
Preference number: 3 (lower is better) Translates to: TRILDGCKPQCG*WEPSTGLLQEQ Trigger: CTGTTCTTGTAGCAGACCCGTGCTTGGTTCCCAGCACCCACACTGTGGTTTGCAACCATCCAGGATTCTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236995.2 |
||
3UTR GCA 72 bp | GCCATCAGATTCTCTGGAACTAGAATCCTGGATGGTTaGAAACCACAGTGTGGGTGCTGGGAACCAAGCACG | + |
Preference number: 3 (lower is better) Translates to: AIRFSGTRILDG*KPQCGCWEPST Trigger: CGTGCTTGGTTCCCAGCACCCACACTGTGGTTTGCAACCATCCAGGATTCTAGTTCCAGAGAATCTGATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236995.2 |
||
3UTR CCA 72 bp | TGCTACGTGATTACAAGCATCATGAAGACCATGGGGTaGGGAAGACTCCCTCCAATGTGGGGCTCACTCACA | + |
Preference number: 3 (lower is better) Translates to: CYVITSIMKTMG*GRLPPMWGSLT Trigger: TGTGAGTGAGCCCCACATTGGAGGGAGTCTTCCCCACCCCATGGTCTTCATGATGCTTGTAATCACGTAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236335.2 |
||
3UTR CCA 72 bp | ATCTGGAGGGGCAGAGGCTTGCTTGTCTTTGGCTTCTaGACACAGCTTGAGGAAGTTAGCAGTACACTTGGG | + |
Preference number: 3 (lower is better) Translates to: IWRGRGLLVFGF*TQLEEVSSTLG Trigger: CCCAAGTGTACTGCTAACTTCCTCAAGCTGTGTCCAGAAGCCAAAGACAAGCAAGCCTCTGCCCCTCCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR CCA 72 bp | TCTGACCCACTGAGCCGTCTCACCAGCCCCACCACTTaGGAACTTGATAGACATGCTTATCATAAGGCTGTG | + |
Preference number: 3 (lower is better) Translates to: SDPLSRLTSPTT*ELDRHAYHKAV Trigger: CACAGCCTTATGATAAGCATGTCTATCAAGTTCCCAAGTGGTGGGGCTGGTGAGACGGCTCAGTGGGTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR-3UTR CAA 90 bp | TTCCTCAGTAGGGCAGGAGGTACCATGAGGCATAGGCATAACCCAGCTACTAGACTACAGCATGGCCCATaGTCTAATCCCTTCCTCCTC | + |
Preference number: 3 (lower is better) Translates to: FLSRAGGTMRHRHNPATRLQHGP*SNPFLL Trigger: GAGGAGGAAGGGATTAGACAATGGGCCATGCTGTAG...TCTAGTAGCTGGGTTATGCCTATGCCTCATGGTACCTCCTGCCCTACTGAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236335.2 |
||
3UTR GCA 72 bp | CAATCCCAATGTGACCAAATCCACGAGGGTCCGAGTTaGCGTTGTGGTAACTCTGAGTCTCGTCATCTTCAG | + |
Preference number: 3 (lower is better) Translates to: QSQCDQIHEGPS*RCGNSESRHLQ Trigger: CTGAAGATGACGAGACTCAGAGTTACCACAACGGCAACTCGGACCCTCGTGGATTTGGTCACATTGGGATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236619.2 |
||
3UTR GCA 72 bp | GGCTGGAGAGATGGCTCAGTGGGTAAGAGCACTGACTaGTCTTCCAAAGGTCATGAGTTCAAATCCCAGCAA | + |
Preference number: 3 (lower is better) Translates to: GWRDGSVGKSTD*SSKGHEFKSQQ Trigger: TTGCTGGGATTTGAACTCATGACCTTTGGAAGAGCAGTCAGTGCTCTTACCCACTGAGCCATCTCTCCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR GCA 72 bp | AAGGGAAGGGCATGTGAAGGAAGGCAAGTATGTATGTaGACGTGTCCGGTGCATGAATGCCATTCAATGGGC | + |
Preference number: 3 (lower is better) Translates to: KGRACEGRQVCM*TCPVHECHSMG Trigger: GCCCATTGAATGGCATTCATGCACCGGACACGTGCACATACATACTTGCCTTCCTTCACATGCCCTTCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR CCA 72 bp | CTCGTTACGGATGGTTGTGAACCACCATGTGGTTCCTaGGATTTGAACTCCAGACCTTCGGAAGAGCAGTCA | + |
Preference number: 3 (lower is better) Translates to: LVTDGCEPPCGS*DLNSRPSEEQS Trigger: TGACTGCTCTTCCGAAGGTCTGGAGTTCAAATCCCAGGAACCACATGGTGGTTCACAACCATCCGTAACGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR-3UTR CAA 90 bp | ACTGTAGACATCAGGAACGGCAATCCCAATGTGACCTTTAGTCCCAGCACTCGGCCGTCTCTCTGTCCCTaGACAAGACACTACCAAAAA | + |
Preference number: 3 (lower is better) Translates to: TVDIRNGNPNVTFSPSTRPSLCP*TRHYQK Trigger: TTTTTGGTAGTGTCTTGTCAAGGGACAGAGAGACGG...CCGAGTGCTGGGACTAAAGGTCACATTGGGATTGCCGTTCCTGATGTCTACAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236995.2 |
||
3UTR TCA 72 bp | CACTCACAGGTGTCCCCTAGAGCAGCCTTGTACTATTaGCCTCTGTGCTTCTTTCTCTGTGGTATTCAAGCC | + |
Preference number: 3 (lower is better) Translates to: HSQVSPRAALYY*PLCFFLCGIQA Trigger: GGCTTGAATACCACAGAGAAAGAAGCACAGAGGTCAATAGTACAAGGCTGCTCTAGGGGACACCTGTGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236335.2 |
||
3UTR TCA 72 bp | ATGCCCTTGGGCCTTCCCATGCTTCTAACAGCATCTTaGGAACAAAGGTCCCTCCACAACCAAGTTGTCAAG | + |
Preference number: 3 (lower is better) Translates to: MPLGLPMLLTAS*EQRSLHNQVVK Trigger: CTTGACAACTTGGTTGTGGAGGGACCTTTGTTCTCAAGATGCTGTTAGAAGCATGGGAAGGCCCAAGGGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR TCA 72 bp | AAAATCCCCGCTGTCCGTTGCCGGAAACTATCGAAGTaGAGACTCTGCCCATTCATTCCCTTGGAAACGCTA | + |
Preference number: 3 (lower is better) Translates to: KIPAVRCRKLSK*RLCPFIPLETL Trigger: TAGCGTTTCCAAGGGAATGAATGGGCAGAGTCTTCACTTCGATAGTTTCCGGCAACGGACAGCGGGGATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR TCA 72 bp | TACAGAACACTTTCTGCTTTTGCAGAAAACCAGAGTTaGGTTCCCAGGACCCACATTGGGCAGCTCACACGC | + |
Preference number: 3 (lower is better) Translates to: YRTLSAFAENQS*VPRTHIGQLTR Trigger: GCGTGTGAGCTGCCCAATGTGGGTCCTGGGAACTCAACTCTGGTTTTCTGCAAAAGCAGAAAGTGTTCTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR TCA 72 bp | CATTCCTCACCACAGGCCCAGAACAACCAGGCTGAGTaGCCACATACTGAAAACTATGAAACATCTCTGGGG | + |
Preference number: 3 (lower is better) Translates to: HSSPQAQNNQAE*PHTENYETSLG Trigger: CCCCAGAGATGTTTCATAGTTTTCAGTATGTGGTCACTCAGCCTGGTTGTTCTGGGCCTGTGGTGAGGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR GCA 72 bp | GGCTGGAGAGATAGCTTAGTAGTTAAGAGCACTGGCTaGTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAA | + |
Preference number: 3 (lower is better) Translates to: GWRDSLVVKSTG*SSRGPEFNSQQ Trigger: TTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGCCAGTGCTCTTAACTACTAAGCTATCTCTCCAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR GCA 72 bp | GTGAAGGAAGGCAAGTATGTATGTGCACGTGTCCGGTaGATGAATGCCATTCAATGGGCAACTTCCCCTACT | + |
Preference number: 3 (lower is better) Translates to: VKEGKYVCARVR*MNAIQWATSPT Trigger: AGTAGGGGAAGTTGCCCATTGAATGGCATTCATGCACCGGACACGTGCACATACATACTTGCCTTCCTTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR CCA 72 bp | CCAGCAACCACATGGCGGCTCACAACCATCTGTAAATaGGATCTGATGCCCTTTCTGATGTGCATGAAGACA | + |
Preference number: 3 (lower is better) Translates to: PATTWRLTTICK*DLMPFLMCMKT Trigger: TGTCTTCATGCACATCAGAAAGGGCATCAGATCCCATTTACAGATGGTTGTGAGCCGCCATGTGGTTGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR TCA 72 bp | TCAGAATCTCAATCCAGTAGCCGTCAGGGTCTTGAATaGACGCCAGTCCTTTCATTTTCCCGTCATCAGGCT | + |
Preference number: 3 (lower is better) Translates to: SESQSSSRQGLE*TPVLSFSRHQA Trigger: AGCCTGATGACGGGAAAATGAAAGGACTGGCGTTCATTCAAGACCCTGACGGCTACTGGATTGAGATTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024823.14 ENSMUST00000235171.2 ENSMUST00000236619.2 ENSMUST00000236995.2 |
||
3UTR TCA 72 bp | TCAGCAGGGAAGACCACAGAGCTAATGCCCGACATCTaGCTCAGCACTGAACATAACATGCTACGTGATTAC | + |
Preference number: 3 (lower is better) Translates to: SAGKTTELMPDI*LSTEHNMLRDY Trigger: GTAATCACGTAGCATGTTATGTTCAGTGCTGAGTCAGATGTCGGGCATTAGCTCTGTGGTCTTCCCTGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236335.2 |
||
3UTR TCA 72 bp | CTTCCCCCTCTCTCCACGTGCTCATGGCCAGCCTCATaGCTCCTCAGTTTGGAGTTTCACATAGTTTATTTT | + |
Preference number: 3 (lower is better) Translates to: LPPLSTCSWPAS*LLSLEFHIVYF Trigger: AAAATAAACTATGTGAAACTCCAAACTGAGGAGTCATGAGGCTGGCCATGAGCACGTGGAGAGAGGGGGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR TCA 72 bp | GAAAGGGAGCAGTCAGAGTGTGACAGACCGAGAACATaGAAAGAAGATCAGGAGATAGAGAAGAGGCGTGAG | + |
Preference number: 3 (lower is better) Translates to: EREQSECDRPRT*KEDQEIEKRRE Trigger: CTCACGCCTCTTCTCTATCTCCTGATCTTCTTTTCATGTTCTCGGTCTGTCACACTCTGACTGCTCCCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR CCA 72 bp | ATTTGCAAGTGCACTGTCCCAACTCCTGCCAAGGCCTaGCCACATACATGCTTTTCAATGCATACAGAAGCA | + |
Preference number: 3 (lower is better) Translates to: ICKCTVPTPAKA*PHTCFSMHTEA Trigger: TGCTTCTGTATGCATTGAAAAGCATGTATGTGGCCAGGCCTTGGCAGGAGTTGGGACAGTGCACTTGCAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR CCA 72 bp | CTACAAGGCAAATTACTTAGGTGGAGCCTCCTGGAATaGGATGCATGTTGCAGTAAACTTCTGCCCCGAGAA | + |
Preference number: 3 (lower is better) Translates to: LQGKLLRWSLLE*DACCSKLLPRE Trigger: TTCTCGGGGCAGAAGTTTACTGCAACATGCATCCCATTCCAGGAGGCTCCACCTAAGTAATTTGCCTTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR-3UTR CAA 90 bp | CCAGGTAAGTGTATTTGCAAGTGCACTGTCCCAACTCCTGCCAAGGCCTGGCCAGAAATATGGTTCACATaGTTAAATTGGGTAGGTCCA | + |
Preference number: 3 (lower is better) Translates to: PGKCICKCTVPTPAKAWPEIWFT*LNWVGP Trigger: TGGACCTACCCAATTTAACAATGTGAACCATATTTC...TGGCCAGGCCTTGGCAGGAGTTGGGACAGTGCACTTGCAAATACACTTACCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR-3UTR CAA 90 bp | CTCAGTAGGGCAGGAGGTACCATGAGGCATAGGCATAACCCAGCTACTAGAAACGGCTTCTTCACAAACTaGACACCTAGTTCTTCAAAT | + |
Preference number: 3 (lower is better) Translates to: LSRAGGTMRHRHNPATRNGFFTN*TPSSSN Trigger: ATTTGAAGAACTAGGTGTCAAGTTTGTGAAGAAGCC...GTTTCTAGTAGCTGGGTTATGCCTATGCCTCATGGTACCTCCTGCCCTACTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024823.14 |
||
3UTR TCA 72 bp | CAGAGCCTTGGAAAACACTTTCAGCCCTTAGACAAGTaGGGAATCCCAGGTTACTTCCTTTCAATGGCCGTT | + |
Preference number: 3 (lower is better) Translates to: QSLGKHFQPLDK*GIPGYFLSMAV Trigger: AACGGCCATTGAAAGGAAGTAACCTGGGATTCCTCACTTGTCTAAGGGCTGAAAGTGTTTTCCAAGGCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR GCA 72 bp | TCAGGCCTCAAGACCAGCCTTTTACACAAAGGGACTTaGTGCCCAGACCTTTATGTACTAAACAGTGTTAGC | + |
Preference number: 3 (lower is better) Translates to: SGLKTSLLHKGT*CPDLYVLNSVS Trigger: GCTAACACTGTTTAGTACATAAAGGTCTGGGCAGCAAGTCCCTTTGTGTAAAAGGCTGGTCTTGAGGCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR CCA 72 bp | AGCCTTGTACTATTGACCTCTGTGCTTCTTTCTCTGTaGTATTCAAGCCCAAGTGTGAGCAGAGAGCATAGG | + |
Preference number: 3 (lower is better) Translates to: SLVLLTSVLLSL*YSSPSVSREHR Trigger: CCTATGCTCTCTGCTCACACTTGGGCTTGAATACCACAGAGAAAGAAGCACAGAGGTCAATAGTACAAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236335.2 |
||
3UTR CCA 72 bp | CTTGGGAACTTGATAGACATGCTTATCATAAGGCTGTaGTGGTCAGGGTTGGACAAGCTTGAGAACCTATGG | + |
Preference number: 3 (lower is better) Translates to: LGNLIDMLIIRL*WSGLDKLENLW Trigger: CCATAGGTTCTCAAGCTTGTCCAACCCTGACCACCACAGCCTTATGATAAGCATGTCTATCAAGTTCCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR GCA 72 bp | GGCCTCAAGACCAGCCTTTTACACAAAGGGACTTGCTaGCCAGACCTTTATGTACTAAACAGTGTTAGCTTT | + |
Preference number: 3 (lower is better) Translates to: GLKTSLLHKGTC*PDLYVLNSVSF Trigger: AAAGCTAACACTGTTTAGTACATAAAGGTCTGGGCAGCAAGTCCCTTTGTGTAAAAGGCTGGTCTTGAGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR GCA 72 bp | CAAGAACTAATGTGCCTCCAGACTCTGCAGATTGCCTaGTCTAGCCATTTTATAGGAATGGAATCACACAGC | + |
Preference number: 3 (lower is better) Translates to: QELMCLQTLQIA*SSHFIGMESHS Trigger: GCTGTGTGATTCCATTCCTATAAAATGGCTAGAGCAGGCAATCTGCAGAGTCTGGAGGCACATTAGTTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR GCA 72 bp | GTTAGAGAGATGGTCCAGCAGTTACAGAACACTTTCTaGTTTTGCAGAAAACCAGAGTTGAGTTCCCAGGAC | + |
Preference number: 3 (lower is better) Translates to: VREMVQQLQNTF*FCRKPELSSQD Trigger: GTCCTGGGAACTCAACTCTGGTTTTCTGCAAAAGCAGAAAGTGTTCTGTAACTGCTGGACCATCTCTCTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR CCA 72 bp | CTTGGAAATGAGCTCCTACAAGGCAAATTACTTAGGTaGAGCCTCCTGGAATGGGATGCATGTTGCAGTAAA | + |
Preference number: 3 (lower is better) Translates to: LGNELLQGKLLR*SLLEWDACCSK Trigger: TTTACTGCAACATGCATCCCATTCCAGGAGGCTCCACCTAAGTAATTTGCCTTGTAGGAGCTCATTTCCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR CCA 72 bp | CCAGAACGTAAGGAGATCAATTTGGCTGCAGAGCCTTaGAAAACACTTTCAGCCCTTAGACAAGTGAGGAAT | + |
Preference number: 3 (lower is better) Translates to: PERKEINLAAEP*KTLSALRQVRN Trigger: ATTCCTCACTTGTCTAAGGGCTGAAAGTGTTTTCCAAGGCTCTGCAGCCAAATTGATCTCCTTACGTTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR CCA 72 bp | CATAAAACACTGTATAGAAGGGCTCCCGAAGACAAATaGCTCAGGTATGTAGCTGCTGATCAGAGGTGGAAA | + |
Preference number: 3 (lower is better) Translates to: HKTLYRRAPEDK*LRYVAADQRWK Trigger: TTTCCACCTCTGATCAGCAGCTACATACCTGAGCCATTTGTCTTCGGGAGCCCTTCTATACAGTGTTTTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR TCA 72 bp | TCCTTTCAATGGCCGTTTTTAGTGGACACACAGCACTaGCTGGCCTTAGCCATCTTTGATCATATATGTGTC | + |
Preference number: 3 (lower is better) Translates to: SFQWPFLVDTQH*LALAIFDHICV Trigger: GACACATATATGATCAAAGATGGCTAAGGCCAGTCAGTGCTGTGTGTCCACTAAAAACGGCCATTGAAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR GCA 72 bp | CTAGGAAGACTGACACACGGAGGCCAAATAGTACTATaGATTCATTATACGTCTTCGTTTGCTCTGCCTAAG | + |
Preference number: 3 (lower is better) Translates to: LGRLTHGGQIVL*IHYTSSFALPK Trigger: CTTAGGCAGAGCAAACGAAGACGTATAATGAATGCATAGTACTATTTGGCCTCCGTGTGTCAGTCTTCCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR CCA 72 bp | TGGAAAACGTCCATGCTGTCTTCTCGGACTTGTCCTTaGGGATATCGTTCTTATCCTCATAAGCTAAGAAGT | + |
Preference number: 3 (lower is better) Translates to: WKTSMLSSRTCP*GYRSYPHKLRS Trigger: ACTTCTTAGCTTATGAGGATAAGAACGATATCCCCAAGGACAAGTCCGAGAAGACAGCATGGACGTTTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236619.2 |
||
3UTR CCA 72 bp | AAACTGTTGGTCTTCCAGAACGTAAGGAGATCAATTTaGCTGCAGAGCCTTGGAAAACACTTTCAGCCCTTA | + |
Preference number: 3 (lower is better) Translates to: KLLVFQNVRRSI*LQSLGKHFQPL Trigger: TAAGGGCTGAAAGTGTTTTCCAAGGCTCTGCAGCCAAATTGATCTCCTTACGTTCTGGAAGACCAACAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR TCA 72 bp | TTAACTATTGACTGGATTGAGCTGAGTCATCACCATTaGAGAGAAGCCTGCTTAAGCACAGCTAACTGTCAC | + |
Preference number: 3 (lower is better) Translates to: LTIDWIELSHHH*REACLSTANCH Trigger: GTGACAGTTAGCTGTGCTTAAGCAGGCTTCTCTTCAATGGTGATGACTCAGCTCAATCCAGTCAATAGTTAA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR TCA 72 bp | CCAAAGAAAGAAGAGCCCATGTGGAAAGGGCAGTGCTaGGGACAGAGTATTAAAGGAATAGTTTCTATTCGA | + |
Preference number: 3 (lower is better) Translates to: PKKEEPMWKGQC*GQSIKGIVSIR Trigger: TCGAATAGAAACTATTCCTTTAATACTCTGTCCTCAGCACTGCCCTTTCCACATGGGCTCTTCTTTCTTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR GCA 72 bp | TGTCGTAACCACAGTACTCATTATTTACATAAAGGATaGTACAGCATGGCCCATTGTCTAATCCCTTCCTCC | + |
Preference number: 3 (lower is better) Translates to: CRNHSTHYLHKG*YSMAHCLIPSS Trigger: GGAGGAAGGGATTAGACAATGGGCCATGCTGTAGCATCCTTTATGTAAATAATGAGTACTGTGGTTACGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236335.2 |
||
3UTR GCA 72 bp | CGTTCTTCTTCTGAAGATCATAATTTTTCTCAACACTaGGACCGTGTTGTATCCCCAGCCTTGTTCTACACA | + |
Preference number: 3 (lower is better) Translates to: RSSSEDHNFSQH*DRVVSPALFYT Trigger: TGTGTAGAACAAGGCTGGGGATACAACACGGTCGCAGTGTTGAGAAAAATTATGATCTTCAGAAGAAGAACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR CCA 72 bp | TTTCTTTCCCATGCTTTTTCAACCATAGAAGCTACCTaGCTTAGTCTGTACAGACTCATGTGTATCCCTGGT | + |
Preference number: 3 (lower is better) Translates to: FLSHAFSTIEAT*LSLYRLMCIPG Trigger: ACCAGGGATACACATGAGTCTGTACAGACTAAGCCAGGTAGCTTCTATGGTTGAAAAAGCATGGGAAAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR TCA 72 bp | GATATAAAAATATCCACGTCCCTAATAAGCTATACTTaGAAATTAGATCATTCAGCCGGGTGGTGGTGGCGG | + |
Preference number: 3 (lower is better) Translates to: DIKISTSLISYT*KLDHSAGWWWR Trigger: CCGCCACCACCACCCGGCTGAATGATCTAATTTTCAAGTATAGCTTATTAGGGACGTGGATATTTTTATATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236995.2 |
||
3UTR CCA 72 bp | ACTACTTATTCAAATATTCATTTTAGAACCCTCTGCTaGCCTATTCCATCAATGGGGTCTAGACACCGGTGT | + |
Preference number: 3 (lower is better) Translates to: TTYSNIHFRTLC*PIPSMGSRHRC Trigger: ACACCGGTGTCTAGACCCCATTGATGGAATAGGCCAGCAGAGGGTTCTAAAATGAATATTTGAATAAGTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR-3UTR CAA 90 bp | CTGACACATGTCCAATTCTTCAGATCCACAAATGTCCATCTGATGCTAGAAACTCCCAAATCTTTTGATTaGACATTTTCTTTCCCATGC | + |
Preference number: 3 (lower is better) Translates to: LTHVQFFRSTNVHLMLETPKSFD*TFSFPC Trigger: GCATGGGAAAGAAAATGTCAAATCAAAAGATTTGGG...AGTTTCTAGCATCAGATGGACATTTGTGGATCTGAAGAATTGGACATGTGTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR TCA 72 bp | TGGTTAGTATTGATTTCAAACCTAGTTTACTCCTATTaGTATTTTTGCTCGCTACCATCCTGTCCGTTCTTC | + |
Preference number: 3 (lower is better) Translates to: WLVLISNLVYSY*YFCSLPSCPFF Trigger: GAAGAACGGACAGGATGGTAGCGAGCAAAAATATCAATAGGAGTAAACTAGGTTTGAAATCAATACTAACCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR GCA 72 bp | CCTCAAAGGCACATTCTCCCGAAACTAAATAATCGTTaGTATTTTGTTAGGATTCAGAATCTCAATCCAGTA | + |
Preference number: 3 (lower is better) Translates to: PQRHILPKLNNR*YFVRIQNLNPV Trigger: TACTGGATTGAGATTCTGAATCCTAACAAAATAGCAACGATTATTTAGTTTCGGGAGAATGTGCCTTTGAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024823.14 ENSMUST00000235171.2 ENSMUST00000236619.2 ENSMUST00000236995.2 |
||
3UTR TCA 72 bp | ACTACATTACCCAATCGAAGTTTTATTGTGCCATCTTaGCAGGATGCATATTTTAGATGTATTCTGTGTGTA | + |
Preference number: 3 (lower is better) Translates to: TTLPNRSFIVPS*QDAYFRCILCV Trigger: TACACACAGAATACATCTAAAATATGCATCCTGTCAAGATGGCACAATAAAACTTCGATTGGGTAATGTAGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236995.2 |
||
CDS-3UTR TCA 90 bp | AGCTGTGTAGCGCTTGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGACAAAGGCCTTGCCCCTaGCCTCCCTGGGGATCTCTC | + |
Preference number: 4 (lower is better) Translates to: SCVALGIAHARLPLQQAGQRPCP*PPWGSL Trigger: GAGAGATCCCCAGGGAGGTCAGGGGCAAGGCCTTTG...TCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAAGCGCTACACAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236619.2 |
||
CDS-3UTR TCA 90 bp | CCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTGACCTCACGGCAATCCCAATGTaGCCAAATCCACGAGGGTCC | + |
Preference number: 4 (lower is better) Translates to: PTPVFHCSRQETSLQSDLTAIPM*PNPRGS Trigger: GGACCCTCGTGGATTTGGTCACATTGGGATTGCCGT...GAGGTCAGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167624.2 ENSMUST00000235547.2 ENSMUST00000236335.2 |
||
CDS-3UTR GCA 90 bp | CATAGCTGTGTAGCGCTTGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCACACGAGGGTCCGAGTTaGCGTTGTGGTAACTCTGAG | + |
Preference number: 4 (lower is better) Translates to: HSCVALGIAHARLPLQQAHEGPS*RCGNSE Trigger: CTCAGAGTTACCACAACGGCAACTCGGACCCTCGTG...TGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAAGCGCTACACAGCTATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000167624.2 ENSMUST00000235547.2 ENSMUST00000236335.2 ENSMUST00000236995.2 |
||
CDS-3UTR CCA 90 bp | CCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTGACCTCAGCTTCTGCAGGAGGATaGTGTGGCACAGGTCTGTTT | + |
Preference number: 4 (lower is better) Translates to: PRPSSTAAGRKLRCSLTSASAGG*CGTGLF Trigger: AAACAGACCTGTGCCACACCATCCTCCTGCAGAAGC...TGAGGTCAGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236619.2 |
||
CDS-3UTR GCA 90 bp | AGAGACCCATCAGTCCCCAACGCTTCTGGTCGCCGCAGCATCTTGAATCACGCTCACGAGGGTCCGAGTTaGCGTTGTGGTAACTCTGAG | + |
Preference number: 4 (lower is better) Translates to: RDPSVPNASGRRSILNHAHEGPS*RCGNSE Trigger: CTCAGAGTTACCACAACGGCAACTCGGACCCTCGTG...AGCGTGATTCAAGATGCTGCGGCGACCAGAAGCGTTGGGGACTGATGGGTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235171.2 ENSMUST00000236335.2 |
||
CDS-3UTR GCA 90 bp | GCAGAAAGCCTGCCCGGCATGTTAAAGGCCTTGGGCTCTAACCCTGTCCCTACACACGAGGGTCCGAGTTaGCGTTGTGGTAACTCTGAG | + |
Preference number: 4 (lower is better) Translates to: AESLPGMLKALGSNPVPTHEGPS*RCGNSE Trigger: CTCAGAGTTACCACAACGGCAACTCGGACCCTCGTG...TGTAGGGACAGGGTTAGAGCCCAAGGCCTTTAACATGCCGGGCAGGCTTTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236995.2 |
||
CDS-3UTR CCA 90 bp | GCTTGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCCAAGGGTGGCTTTTCTaGAAAACGTCCATGCTGTCT | + |
Preference number: 4 (lower is better) Translates to: AWHCPRPSSTAAGRKLRCQGWLF*KTSMLS Trigger: AGACAGCATGGACGTTTTCCAGAAAAGCCACCCTTG...GCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000167624.2 ENSMUST00000235547.2 ENSMUST00000236335.2 ENSMUST00000236995.2 |
||
CDS-3UTR CCA 90 bp | CCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTGACCTCCAAGGGTGGCTTTTCTaGAAAACGTCCATGCTGTCT | + |
Preference number: 4 (lower is better) Translates to: PTPVFHCSRQETSLQSDLQGWLF*KTSMLS Trigger: AGACAGCATGGACGTTTTCCAGAAAAGCCACCCTTG...GAGGTCAGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000167624.2 ENSMUST00000235547.2 ENSMUST00000236335.2 ENSMUST00000236995.2 |
||
3UTR CAA 72 bp | ATTCAGTGTCCTGCTCTGGCTCCTACCCACCCGCAGTaGGTGCTTCCTGTTCCAACAACTCTAGGTGCTGCT | + |
Preference number: 4 (lower is better) Translates to: IQCPALAPTHPQ*VLPVPTTLGAA Trigger: AGCAGCACCTAGAGTTGTTGGAACAGGAAGCACCAACTGCGGGTGGGTAGGAGCCAGAGCAGGACACTGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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CDS-3UTR TCA 90 bp | ACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTGACCTCAAAGGGATCTCTCCCATTTaGTTAAGAAAGCGGTTGCTG | + |
Preference number: 4 (lower is better) Translates to: TPVFHCSRQETSLQSDLKGISPI*LRKRLL Trigger: CAGCAACCGCTTTCTTAATCAAATGGGAGAGATCCC...TTTGAGGTCAGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236619.2 |
||
3UTR CAA 72 bp | ACGGATGGTTGTGAACCACCATGTGGTTCCTGGGATTaGAACTCCAGACCTTCGGAAGAGCAGTCAGGTGCT | + |
Preference number: 4 (lower is better) Translates to: TDGCEPPCGSWD*NSRPSEEQSGA Trigger: AGCACCTGACTGCTCTTCCGAAGGTCTGGAGTTCAAATCCCAGGAACCACATGGTGGTTCACAACCATCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
CDS-3UTR TCA 90 bp | TTGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGGCTTCTTCACAAACTTaGCACCTAGTTCTTCAAATC | + |
Preference number: 4 (lower is better) Translates to: LALPTPVFHCSRQETSLQASSQT*HLVLQI Trigger: GATTTGAAGAACTAGGTGTCAAGTTTGTGAAGAAGC...CTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167624.2 ENSMUST00000235547.2 ENSMUST00000236335.2 |
||
CDS-3UTR TCA 90 bp | TGTGTAGCGCTTGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACGCTTCTTCACAAACTTaGCACCTAGTTCTTCAAATC | + |
Preference number: 4 (lower is better) Translates to: CVALGIAHARLPLQQAGNASSQT*HLVLQI Trigger: GATTTGAAGAACTAGGTGTCAAGTTTGTGAAGAAGC...GTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAAGCGCTACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167624.2 ENSMUST00000235547.2 ENSMUST00000236335.2 |
||
CDS-3UTR GCA 90 bp | GTAGCCGTCAGGGTCTTGAATGAACGCCAGTCCTTTCATTTTCCCGTCATCAGGGAGGAAAGGAGAACATaGGTGAGCTCAAGGGTGGCT | + |
Preference number: 4 (lower is better) Translates to: VAVRVLNERQSFHFPVIREERRT*VSSRVA Trigger: AGCCACCCTTGAGCTCACGCATGTTCTCCTTTCCTC...CCTGATGACGGGAAAATGAAAGGACTGGCGTTCATTCAAGACCCTGACGGCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235171.2 |
||
CDS-3UTR TCA 90 bp | AGTTGCCGTTGTGGTAACTCTGAGTCTCGTCATCTTCAGTGCCCCAGTTGTGCGGGGATCTCTCCCATTTaGTTAAGAAAGCGGTTGCTG | + |
Preference number: 4 (lower is better) Translates to: SCRCGNSESRHLQCPSCAGISPI*LRKRLL Trigger: CAGCAACCGCTTTCTTAATCAAATGGGAGAGATCCC...CGCACAACTGGGGCACTGAAGATGACGAGACTCAGAGTTACCACAACGGCAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236619.2 |
||
3UTR CAA 72 bp | CTAGTGGCAGAAAGCCTGCCCGGCATGTTAAAGGCCTaGGGCTCTAACCCTGTCCCTACAATAAGGTTTACT | + |
Preference number: 4 (lower is better) Translates to: LVAESLPGMLKA*GSNPVPTIRFT Trigger: AGTAAACCTTATTGTAGGGACAGGGTTAGAGCCCAAGGCCTTTAACATGCCGGGCAGGCTTTCTGCCACTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236995.2 |
||
3UTR CAA 72 bp | CATGCCCTTGGGCCTTCCCATGCTTCTAACAGCATCTaGAGAACAAAGGTCCCTCCACAACCAAGTTGTCAA | + |
Preference number: 4 (lower is better) Translates to: HALGPSHASNSI*RTKVPPQPSCQ Trigger: TTGACAACTTGGTTGTGGAGGGACCTTTGTTCTCAAGATGCTGTTAGAAGCATGGGAAGGCCCAAGGGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
3UTR CAA 72 bp | TTGCAGAAAACCAGAGTTGAGTTCCCAGGACCCACATaGGGCAGCTCACACGCTATCTACCACTTGACTATG | + |
Preference number: 4 (lower is better) Translates to: LQKTRVEFPGPT*GSSHAIYHLTM Trigger: CATAGTCAAGTGGTAGATAGCGTGTGAGCTGCCCAATGTGGGTCCTGGGAACTCAACTCTGGTTTTCTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
||
CDS-3UTR TCA 90 bp | TATTTTGTTAGGATTCAGAATCTCAATCCAGTAGCCGTCAGGGTCTTGAATGAACAAAGGCCTTGCCCCTaGCCTCCCTGGGGATCTCTC | + |
Preference number: 4 (lower is better) Translates to: YFVRIQNLNPVAVRVLNEQRPCP*PPWGSL Trigger: GAGAGATCCCCAGGGAGGTCAGGGGCAAGGCCTTTG...TTCATTCAAGACCCTGACGGCTACTGGATTGAGATTCTGAATCCTAACAAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236619.2 |
||
CDS-3UTR GCA 90 bp | GTCAGGGTCTTGAATGAACGCCAGTCCTTTCATTTTCCCGTCATCAGGCTTCTTCTTCAGTGCCCCAGTTaGTACAGAGGAAAGGAGAAC | + |
Preference number: 4 (lower is better) Translates to: VRVLNERQSFHFPVIRLLLQCPS*YRGKEN Trigger: GTTCTCCTTTCCTCTGTAGCAACTGGGGCACTGAAG...AAGAAGCCTGATGACGGGAAAATGAAAGGACTGGCGTTCATTCAAGACCCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235171.2 |
||
CDS-3UTR GCA 90 bp | GTCAGGGTCTTGAATGAACGCCAGTCCTTTCATTTTCCCGTCATCAGGCTTCTTTCTCGTCATCTTCAGTaGCCCAGTTGCTACAGAGGA | + |
Preference number: 4 (lower is better) Translates to: VRVLNERQSFHFPVIRLLSRHLQ*PSCYRG Trigger: TCCTCTGTAGCAACTGGGGCACTGAAGATGACGAGA...AAGAAGCCTGATGACGGGAAAATGAAAGGACTGGCGTTCATTCAAGACCCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235171.2 |
||
3UTR CAA 72 bp | AGCTGGCTATTCTGTGTCGTCCGGGTTACTGTTTCCTaGGTGTTACTGCTCAACTGTCCGTTACTAACGTGT | + |
Preference number: 4 (lower is better) Translates to: SWLFCVVRVTVS*VLLLNCPLLTC Trigger: ACACGTTAGTAACGGACAGTTGAGCAGTAACACCAAGGAAACAGTAACCCGGACGACACAGAATAGCCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR CAA 72 bp | ATAGACATGCTTATCATAAGGCTGTGGTGGTCAGGGTaGGACAAGCTTGAGAACCTATGGCTGGGAACCCAT | + |
Preference number: 4 (lower is better) Translates to: IDMLIIRLWWSG*DKLENLWLGTH Trigger: ATGGGTTCCCAGCCATAGGTTCTCAAGCTTGTCCAACCCTGACCACCACAGCCTTATGATAAGCATGTCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR CAA 72 bp | GGCGGTTCTCCATGTGGGAAAATAAGCTTATCAGTCTaGTTCCCTAAGTCTAGGAAGACTGACACACGGAGG | + |
Preference number: 4 (lower is better) Translates to: GGSPCGKISLSV*FPKSRKTDTRR Trigger: CCTCCGTGTGTCAGTCTTCCTAGACTTAGGGAACAAGACTGATAAGCTTATTTTCCCACATGGAGAACCGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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CDS-3UTR CCA 90 bp | GTCAGGGTCTTGAATGAACGCCAGTCCTTTCATTTTCCCGTCATCAGGCTTCTTCAAGGGTGGCTTTTCTaGAAAACGTCCATGCTGTCT | + |
Preference number: 4 (lower is better) Translates to: VRVLNERQSFHFPVIRLLQGWLF*KTSMLS Trigger: AGACAGCATGGACGTTTTCCAGAAAAGCCACCCTTG...AAGAAGCCTGATGACGGGAAAATGAAAGGACTGGCGTTCATTCAAGACCCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000235171.2 ENSMUST00000236995.2 |
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CDS-3UTR GCA 90 bp | GCTTTATTTCAGCCTATGATGTGTTTAAACTGCTCACATAGATCACCAAGTGCCCACGAGGGTCCGAGTTaGCGTTGTGGTAACTCTGAG | + |
Preference number: 4 (lower is better) Translates to: ALFQPMMCLNCSHRSPSAHEGPS*RCGNSE Trigger: CTCAGAGTTACCACAACGGCAACTCGGACCCTCGTG...GGCACTTGGTGATCTATGTGAGCAGTTTAAACACATCATAGGCTGAAATAAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000167624.2 ENSMUST00000235547.2 ENSMUST00000236335.2 ENSMUST00000236995.2 |
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3UTR CAA 72 bp | AGGATTCAGAATCTCAATCCAGTAGCCGTCAGGGTCTaGAATGAACGCCAGTCCTTTCATTTTCCCGTCATC | + |
Preference number: 4 (lower is better) Translates to: RIQNLNPVAVRV*NERQSFHFPVI Trigger: GATGACGGGAAAATGAAAGGACTGGCGTTCATTCAAGACCCTGACGGCTACTGGATTGAGATTCTGAATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024823.14 ENSMUST00000235171.2 ENSMUST00000236619.2 ENSMUST00000236995.2 |
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3UTR CAA 72 bp | AGAGATGGTCCAGCAGTTACAGAACACTTTCTGCTTTaGCAGAAAACCAGAGTTGAGTTCCCAGGACCCACA | + |
Preference number: 4 (lower is better) Translates to: RDGPAVTEHFLL*QKTRVEFPGPT Trigger: TGTGGGTCCTGGGAACTCAACTCTGGTTTTCTGCAAAAGCAGAAAGTGTTCTGTAACTGCTGGACCATCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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CDS-3UTR CCA 90 bp | ACTCATTATTTACATAAAGGATGCTACAGCATGGCCCATTGTCTAATCCCTTCCGCTTCTGCAGGAGGATaGTGTGGCACAGGTCTGTTT | + |
Preference number: 4 (lower is better) Translates to: THYLHKGCYSMAHCLIPSASAGG*CGTGLF Trigger: AAACAGACCTGTGCCACACCATCCTCCTGCAGAAGC...GGAAGGGATTAGACAATGGGCCATGCTGTAGCATCCTTTATGTAAATAATGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024823.14 |
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3UTR CAA 72 bp | ACTGACCGCCCAAGCCTTCAGACCAATCAGGTGGCTTaGTCTGTCGTAACCACAGTACTCATTATTTACATA | + |
Preference number: 4 (lower is better) Translates to: TDRPSLQTNQVA*SVVTTVLIIYI Trigger: TATGTAAATAATGAGTACTGTGGTTACGACAGACAAAGCCACCTGATTGGTCTGAAGGCTTGGGCGGTCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024823.14 ENSMUST00000236335.2 |
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3UTR CAA 72 bp | ATTAGAATCCCATTTGGTGATTCCAGCATTGGACATTaGAAACTGGCCCTCCTAGATTCCTGTGACCCACCT | + |
Preference number: 4 (lower is better) Translates to: IRIPFGDSSIGH*KLALLDSCDPP Trigger: AGGTGGGTCACAGGAATCTAGGAGGGCCAGTTTCAAATGTCCAATGCTGGAATCACCAAATGGGATTCTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR CAA 72 bp | AAAACTGTTGGTCTTCCAGAACGTAAGGAGATCAATTaGGCTGCAGAGCCTTGGAAAACACTTTCAGCCCTT | + |
Preference number: 4 (lower is better) Translates to: KTVGLPERKEIN*AAEPWKTLSAL Trigger: AAGGGCTGAAAGTGTTTTCCAAGGCTCTGCAGCCAAATTGATCTCCTTACGTTCTGGAAGACCAACAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR CAA 72 bp | AGGAGGTGGCCGGAGATTAAGTTTACAGGAGAGAAGTaGACAAGCATAACCTCAGTAGGCTATGAGTTATGT | + |
Preference number: 4 (lower is better) Translates to: RRWPEIKFTGEK*TSITSVGYELC Trigger: ACATAACTCATAGCCTACTGAGGTTATGCTTGTCAACTTCTCTCCTGTAAACTTAATCTCCGGCCACCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR CAA 72 bp | CATTTCCTCTTCCCCATGATGACTGTTTCTCCTGACTaGAAATTTTGGTTCTTCAGAGAGCTTAGCATGGGG | + |
Preference number: 4 (lower is better) Translates to: HFLFPMMTVSPD*KFWFFRELSMG Trigger: CCCCATGCTAAGCTCTCTGAAGAACCAAAATTTCAAGTCAGGAGAAACAGTCATCATGGGGAAGAGGAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR CAA 72 bp | CCTTTCATTTTCCCGTCATCAGGCTTCTTCACAAACTaGACACCTAGTTCTTCAAATCTCTTACAGGCACTG | + |
Preference number: 4 (lower is better) Translates to: PFIFPSSGFFTN*TPSSSNLLQAL Trigger: CAGTGCCTGTAAGAGATTTGAAGAACTAGGTGTCAAGTTTGTGAAGAAGCCTGATGACGGGAAAATGAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024823.14 ENSMUST00000236619.2 ENSMUST00000236995.2 |
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3UTR CAA 72 bp | CTGCAGTCTGACCTCAAATTGGGTTTTGTCCTCCAGTaGTTGAGTCTTCAAATCACCTCTGAGAATCCATTA | + |
Preference number: 4 (lower is better) Translates to: LQSDLKLGFVLQ*LSLQITSENPL Trigger: TAATGGATTCTCAGAGGTGATTTGAAGACTCAACAACTGGAGGACAAAACCCAATTTGAGGTCAGACTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024823.14 ENSMUST00000167624.2 ENSMUST00000235547.2 ENSMUST00000236335.2 ENSMUST00000236619.2 ENSMUST00000236995.2 |
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CDS-3UTR TCA 90 bp | CAGTCTGACCTCAAATTGGGTTTTGTCCTCCAGTTGTTGAGTCTTCAAATCACCGCTTCTTCACAAACTTaGCACCTAGTTCTTCAAATC | + |
Preference number: 4 (lower is better) Translates to: QSDLKLGFVLQLLSLQITASSQT*HLVLQI Trigger: GATTTGAAGAACTAGGTGTCAAGTTTGTGAAGAAGC...GGTGATTTGAAGACTCAACAACTGGAGGACAAAACCCAATTTGAGGTCAGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000167624.2 ENSMUST00000235547.2 ENSMUST00000236335.2 |
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3UTR CAA 72 bp | CCCCAGCCTTGTTCTACACAGACATTTAATATGATTTaGTGCCCCCAATCATGCTCTGAACACTCCATTAAA | + |
Preference number: 4 (lower is better) Translates to: PQPCSTQTFNMI*CPQSCSEHSIK Trigger: TTTAATGGAGTGTTCAGAGCATGATTGGGGGCACAAAATCATATTAAATGTCTGTGTAGAACAAGGCTGGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR CAA 72 bp | CTTCCCACCCCTAGAAATATGGTTCACATTGTTAAATaGGGTAGGTCCAGTATTAGAATCCCATTTGGTGAT | + |
Preference number: 4 (lower is better) Translates to: LPTPRNMVHIVK*GRSSIRIPFGD Trigger: ATCACCAAATGGGATTCTAATACTGGACCTACCCAATTTAACAATGTGAACCATATTTCTAGGGGTGGGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR CAA 72 bp | AGCAAGTACTTCCCACCCCTAGAAATATGGTTCACATaGTTAAATTGGGTAGGTCCAGTATTAGAATCCCAT | + |
Preference number: 4 (lower is better) Translates to: SKYFPPLEIWFT*LNWVGPVLESH Trigger: ATGGGATTCTAATACTGGACCTACCCAATTTAACAATGTGAACCATATTTCTAGGGGTGGGAAGTACTTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR CAA 72 bp | ATTGATTTCAAACCTAGTTTACTCCTATTGATATTTTaGCTCGCTACCATCCTGTCCGTTCTTCTTCTGAAG | + |
Preference number: 4 (lower is better) Translates to: IDFKPSLLLLIF*LATILSVLLLK Trigger: CTTCAGAAGAAGAACGGACAGGATGGTAGCGAGCAAAAATATCAATAGGAGTAAACTAGGTTTGAAATCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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3UTR CAA 72 bp | GTGGTTAGTATTGATTTCAAACCTAGTTTACTCCTATaGATATTTTTGCTCGCTACCATCCTGTCCGTTCTT | + |
Preference number: 4 (lower is better) Translates to: VVSIDFKPSLLL*IFLLATILSVL Trigger: AAGAACGGACAGGATGGTAGCGAGCAAAAATATCAATAGGAGTAAACTAGGTTTGAAATCAATACTAACCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236335.2 |
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CDS-3UTR CAA 90 bp | AGCTGTGTAGCGCTTGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGATGCAGTAGAAAATCCTaGGTGCTAGGGTCTGGATCG | + |
Preference number: 5 (lower is better) Translates to: SCVALGIAHARLPLQQAGCSRKS*VLGSGS Trigger: CGATCCAGACCCTAGCACCAAGGATTTTCTACTGCA...TCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAAGCGCTACACAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024823.14 ENSMUST00000167624.2 ENSMUST00000235547.2 ENSMUST00000236335.2 ENSMUST00000236619.2 ENSMUST00000236995.2 |
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CDS-3UTR CAA 90 bp | CGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTGACCTCAAATTCTTCAGTGCCCCAGTaGTGCGTGAGCTCAAGGGTG | + |
Preference number: 5 (lower is better) Translates to: RPSSTAAGRKLRCSLTSNSSVPQ*CVSSRV Trigger: CACCCTTGAGCTCACGCACAACTGGGGCACTGAAGA...ATTTGAGGTCAGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000167624.2 ENSMUST00000235547.2 ENSMUST00000236335.2 ENSMUST00000236995.2 |
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CDS-3UTR CAA 90 bp | ACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTGACCTCAAATCTTCAGTGCCCCAGTaGTGCGTGAGCTCAAGGGTG | + |
Preference number: 5 (lower is better) Translates to: TPVFHCSRQETSLQSDLKSSVPQ*CVSSRV Trigger: CACCCTTGAGCTCACGCACAACTGGGGCACTGAAGA...TTTGAGGTCAGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000167624.2 ENSMUST00000235547.2 ENSMUST00000236335.2 ENSMUST00000236995.2 |
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CDS-3UTR CAA 90 bp | TGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTTGCAGTAGAAAATCCTaGGTGCTAGGGTCTGGATCG | + |
Preference number: 5 (lower is better) Translates to: WHCPRPSSTAAGRKLRCSCSRKS*VLGSGS Trigger: CGATCCAGACCCTAGCACCAAGGATTTTCTACTGCA...ACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024823.14 ENSMUST00000167624.2 ENSMUST00000235547.2 ENSMUST00000236335.2 ENSMUST00000236619.2 ENSMUST00000236995.2 |
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CDS-3UTR CAA 90 bp | TTGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTGCAGTAGAAAATCCTaGGTGCTAGGGTCTGGATCG | + |
Preference number: 5 (lower is better) Translates to: LALPTPVFHCSRQETSLQCSRKS*VLGSGS Trigger: CGATCCAGACCCTAGCACCAAGGATTTTCTACTGCA...CTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024823.14 ENSMUST00000167624.2 ENSMUST00000235547.2 ENSMUST00000236335.2 ENSMUST00000236619.2 ENSMUST00000236995.2 |
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CDS-3UTR CAA 90 bp | CTGTGTAGCGCTTGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAATGCAGTAGAAAATCCTaGGTGCTAGGGTCTGGATCG | + |
Preference number: 5 (lower is better) Translates to: LCSAWHCPRPSSTAAGRKCSRKS*VLGSGS Trigger: CGATCCAGACCCTAGCACCAAGGATTTTCTACTGCA...TTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAAGCGCTACACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024823.14 ENSMUST00000167624.2 ENSMUST00000235547.2 ENSMUST00000236335.2 ENSMUST00000236619.2 ENSMUST00000236995.2 |
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CDS GCA 90 bp | GTTCCAGGACTACACAGAGAAACCCAAATCCACGAGGGTCCGAGTTaGCGTTGTGGTAACTCTGAGTCTCGTCATCTTCAGTGCCCCAGT | + |
Preference number: 5 (lower is better) Translates to: VPGLHRETQIHEGPS*RCGNSESRHLQCPS Trigger: ACTGGGGCACTGAAGATGACGAGACTCAGAGTTACCACAACGGCAACTCGGACCCTCGTGGATTTGGGTTTCTCTGTGTAGTCCTGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236995.2 |
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CDS GCA 90 bp | GGTCCGAGTTGCCGTTGTGGTAACTCTGAGTCTCGTCATCTTCAGTaGCCCAGTTGCTACAGAGGAAAGGAGAACATGCGTGAGCTCAAG | + |
Preference number: 5 (lower is better) Translates to: GPSCRCGNSESRHLQ*PSCYRGKENMRELK Trigger: CTTGAGCTCACGCATGTTCTCCTTTCCTCTGTAGCAACTGGGGCACTGAAGATGACGAGACTCAGAGTTACCACAACGGCAACTCGGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235171.2 |
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CDS-3UTR CAA 90 bp | TTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGTCTGACCTCAAATTGGGTTTTTCTTCAGTGCCCCAGTaGTGCGTGAGCTCAAGGGTG | + |
Preference number: 5 (lower is better) Translates to: FHCSRQETSLQSDLKLGFSSVPQ*CVSSRV Trigger: CACCCTTGAGCTCACGCACAACTGGGGCACTGAAGA...AAAACCCAATTTGAGGTCAGACTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000167624.2 ENSMUST00000235547.2 ENSMUST00000236335.2 ENSMUST00000236995.2 |
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CDS-3UTR CAA 90 bp | GCTTGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCGGCTTCTTCACAAACTaGACACCTAGTTCTTCAAAT | + |
Preference number: 5 (lower is better) Translates to: AWHCPRPSSTAAGRKLRCGFFTN*TPSSSN Trigger: ATTTGAAGAACTAGGTGTCAAGTTTGTGAAGAAGCC...GCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167624.2 ENSMUST00000235547.2 ENSMUST00000236335.2 |
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CDS GCA 90 bp | TGCCGTTGTGGTAACTCTGAGTCTCGTCATCTTCAGTGCCCCAGTTaGTACAGAGGAAAGGAGAACATGCGTGAGCTCAAGGGTGGCTTT | + |
Preference number: 5 (lower is better) Translates to: CRCGNSESRHLQCPS*YRGKENMRELKGGF Trigger: AAAGCCACCCTTGAGCTCACGCATGTTCTCCTTTCCTCTGTAGCAACTGGGGCACTGAAGATGACGAGACTCAGAGTTACCACAACGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235171.2 |
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CDS-3UTR CAA 90 bp | TGTTTCTTTTCCACGCCGCTTTGTTCCCGCTGTCCCCCATACCTCAAAGGCACATGCAGTAGAAAATCCTaGGTGCTAGGGTCTGGATCG | + |
Preference number: 5 (lower is better) Translates to: CFFSTPLCSRCPPYLKGTCSRKS*VLGSGS Trigger: CGATCCAGACCCTAGCACCAAGGATTTTCTACTGCA...TGTGCCTTTGAGGTATGGGGGACAGCGGGAACAAAGCGGCGTGGAAAAGAAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000024823.14 ENSMUST00000235171.2 ENSMUST00000236335.2 |
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CDS-3UTR CAA 90 bp | TTGGCATTGCCCACGCCCGTCTTCCACTGCAGCAGGCAGGAAACTTCGCTGCAGGGCTTCTTCACAAACTaGACACCTAGTTCTTCAAAT | + |
Preference number: 5 (lower is better) Translates to: LALPTPVFHCSRQETSLQGFFTN*TPSSSN Trigger: ATTTGAAGAACTAGGTGTCAAGTTTGTGAAGAAGCC...CTGCAGCGAAGTTTCCTGCCTGCTGCAGTGGAAGACGGGCGTGGGCAATGCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167624.2 ENSMUST00000235547.2 ENSMUST00000236335.2 |
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CDS GCA 90 bp | AAATCCAGGGACTTCTTAGGATCCTTAATTCTTAGCATCGTTTGCTaGAGTAGAAAATCCTTGGTGCTAGGGTCTGGATCGGAGCAGCAG | + |
Preference number: 5 (lower is better) Translates to: KSRDFLGSLILSIVC*SRKSLVLGSGSEQQ Trigger: CTGCTGCTCCGATCCAGACCCTAGCACCAAGGATTTTCTACTGCAGCAAACGATGCTAAGAATTAAGGATCCTAAGAAGTCCCTGGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000024823.14 ENSMUST00000167624.2 ENSMUST00000235171.2 ENSMUST00000235547.2 ENSMUST00000236335.2 ENSMUST00000236619.2 ENSMUST00000236995.2 |
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CDS GCA 72 bp | CTACACAGAGAAACCCAAATCCACGAGGGTCCGAGTTaGCGTTGTGGTAACTCTGAGTCTCGTCATCTTCAG | + |
Preference number: 6 (lower is better) Translates to: LHRETQIHEGPS*RCGNSESRHLQ Trigger: CTGAAGATGACGAGACTCAGAGTTACCACAACGGCAACTCGGACCCTCGTGGATTTGGGTTTCTCTGTGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236995.2 |
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CDS GCA 72 bp | GGTAACTCTGAGTCTCGTCATCTTCAGTGCCCCAGTTaGTACAGAGGAAAGGAGAACATGCGTGAGCTCAAG | + |
Preference number: 6 (lower is better) Translates to: GNSESRHLQCPS*YRGKENMRELK Trigger: CTTGAGCTCACGCATGTTCTCCTTTCCTCTGTAGCAACTGGGGCACTGAAGATGACGAGACTCAGAGTTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235171.2 |
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CDS CAA 72 bp | TTAATTCTTAGCATCGTTTGCTGCAGTAGAAAATCCTaGGTGCTAGGGTCTGGATCGGAGCAGCAGCTGAAA | + |
Preference number: 6 (lower is better) Translates to: LILSIVCCSRKS*VLGSGSEQQLK Trigger: TTTCAGCTGCTGCTCCGATCCAGACCCTAGCACCAAGGATTTTCTACTGCAGCAAACGATGCTAAGAATTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000024823.14 ENSMUST00000167624.2 ENSMUST00000235171.2 ENSMUST00000235547.2 ENSMUST00000236335.2 ENSMUST00000236619.2 ENSMUST00000236995.2 |
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CDS GCA 72 bp | GACTTCTTAGGATCCTTAATTCTTAGCATCGTTTGCTaGAGTAGAAAATCCTTGGTGCTAGGGTCTGGATCG | + |
Preference number: 6 (lower is better) Translates to: DFLGSLILSIVC*SRKSLVLGSGS Trigger: CGATCCAGACCCTAGCACCAAGGATTTTCTACTGCAGCAAACGATGCTAAGAATTAAGGATCCTAAGAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000024823.14 ENSMUST00000167624.2 ENSMUST00000235171.2 ENSMUST00000235547.2 ENSMUST00000236335.2 ENSMUST00000236619.2 ENSMUST00000236995.2 |
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CDS GCA 72 bp | AGGGACTTCTTAGGATCCTTAATTCTTAGCATCGTTTaGTGCAGTAGAAAATCCTTGGTGCTAGGGTCTGGA | + |
Preference number: 6 (lower is better) Translates to: RDFLGSLILSIV*CSRKSLVLGSG Trigger: TCCAGACCCTAGCACCAAGGATTTTCTACTGCAGCAAACGATGCTAAGAATTAAGGATCCTAAGAAGTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000024823.14 ENSMUST00000167624.2 ENSMUST00000235171.2 ENSMUST00000235547.2 ENSMUST00000236335.2 ENSMUST00000236619.2 ENSMUST00000236995.2 |