Pregenerated sensors for GLMN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029276Ensembl transcript IDs: ENSMUST00000078021.13, ENSMUST00000082121.9, ENSMUST00000100949.10, ENSMUST00000124140.2, ENSMUST00000124546.8
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TATTTCAGATGCAAAACACCGAAAAGGGTCATTTCCAACGTCTTCTaGCTGTTCGAGGAATTGTGCTGTCAGCAAAGGGCATTTCAAGCC | + |
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Preference number: 1 (lower is better) Translates to: YFRCKTPKRVISNVF*LFEELCCQQRAFQA Trigger: GGCTTGAAATGCCCTTTGCTGACAGCACAATTCCTCGAACAGTCAGAAGACGTTGGAAATGACCCTTTTCGGTGTTTTGCATCTGAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124546.8 |
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| 3UTR TCA 90 bp | GATTTCTTCTCCACCTACAGTCACGGAACAAACACCTTTACACATTaGGGCTACTTGGTTATTTTGTTGGCTGTTTTTAATTTCTGCTTC | + |
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Preference number: 1 (lower is better) Translates to: DFFSTYSHGTNTFTH*GYLVILLAVFNFCF Trigger: GAAGCAGAAATTAAAAACAGCCAACAAAATAACCAAGTAGCCTCAATGTGTAAAGGTGTTTGTTCCGTGACTGTAGGTGGAGAAGAAATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124546.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGAGTTCTGCAGTAAGTCTGTCTCAGCGCCCTCAGGGAGAGACAGGACCAGGCTGTTCGAGGAATTGTaGTGTCAGCAAAGGGCATTT | + |
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Preference number: 2 (lower is better) Translates to: SEFCSKSVSAPSGRDRTRLFEEL*CQQRAF Trigger: AAATGCCCTTTGCTGACAGCACAATTCCTCGAACAG...CCTGGTCCTGTCTCTCCCTGAGGGCGCTGAGACAGACTTACTGCAGAACTCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124546.8 |
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| 3UTR-3UTR TCA 90 bp | ATCCTGTCTGAGTTCTGCAGTAAGTCTGTCTCAGCGCCCTCAGGGAGAGACAGGGGAAGAAGAGACAGCTaGCTCCAAAGTGTTGACAAT | + |
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Preference number: 2 (lower is better) Translates to: ILSEFCSKSVSAPSGRDRGRRDS*LQSVDN Trigger: ATTGTCAACACTTTGGAGTCAGCTGTCTCTTCTTCC...CCTGTCTCTCCCTGAGGGCGCTGAGACAGACTTACTGCAGAACTCAGACAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124546.8 |
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| 3UTR-3UTR TCA 90 bp | CGGAACAAACACCTTTACACATTGAGGCTACTTGGTTATTTTGTTGGCTGTTTTCGGAGGGCTCTTCAATaGGTTCAAGCAAACCCAACA | + |
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Preference number: 2 (lower is better) Translates to: RNKHLYTLRLLGYFVGCFRRALQ*VQANPT Trigger: TGTTGGGTTTGCTTGAACTCATTGAAGAGCCCTCCG...AAAACAGCCAACAAAATAACCAAGTAGCCTCAATGTGTAAAGGTGTTTGTTCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124546.8 |
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| 3UTR-3UTR CCA 90 bp | AGGTCTAACAGAGAGATCAGCTGTGCTCCTGCAAACCATTTGTTATATGTTTTCATGGGCTTAAGACCATaGGCAGCTGATCAATACCGA | + |
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Preference number: 2 (lower is better) Translates to: RSNREISCAPANHLLYVFMGLRP*AADQYR Trigger: TCGGTATTGATCAGCTGCCCATGGTCTTAAGCCCAT...GAAAACATATAACAAATGGTTTGCAGGAGCACAGCTGATCTCTCTGTTAGACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124546.8 |
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| 3UTR-3UTR GCA 90 bp | CGGAACAAACACCTTTACACATTGAGGCTACTTGGTTATTTTGTTGGCTGTTTTAGAAGCCACAGACTCTaGCAGTTGTTTGTCTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: RNKHLYTLRLLGYFVGCFRSHRL*QLFVFF Trigger: GAAGAAGACAAACAACTGGCAGAGTCTGTGGCTTCT...AAAACAGCCAACAAAATAACCAAGTAGCCTCAATGTGTAAAGGTGTTTGTTCCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124546.8 |
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| 3UTR CAA 90 bp | CTCCAGAAGTTCCAATCCTTTGGAGTAAATAGACTGTTCTGTTCTTaGCAGAAACACTTCAATATGCTCCATGTTCAACTGCAGAAGGTA | + |
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Preference number: 2 (lower is better) Translates to: LQKFQSFGVNRLFCS*QKHFNMLHVQLQKV Trigger: TACCTTCTGCAGTTGAACATGGAGCATATTGAAGTGTTTCTGCAAAGAACAGAACAGTCTATTTACTCCAAAGGATTGGAACTTCTGGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124546.8 |
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| 3UTR-3UTR TCA 90 bp | CGGAACAAACACCTTTACACATTGAGGCTACTTGGTTATTTTGTTGGCTGTTTTCTGAATTTGTTCTTCTaGGTGTGGAACAGGAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: RNKHLYTLRLLGYFVGCFLNLFF*VWNRKK Trigger: CTTCTTCCTGTTCCACACTCAGAAGAACAAATTCAG...AAAACAGCCAACAAAATAACCAAGTAGCCTCAATGTGTAAAGGTGTTTGTTCCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124546.8 |
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| 3UTR-3UTR GCA 90 bp | CGGAACAAACACCTTTACACATTGAGGCTACTTGGTTATTTTGTTGGCTGTTTTGATCAGCTGTGCTCCTaGAAACCATTTGTTATATGT | + |
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Preference number: 2 (lower is better) Translates to: RNKHLYTLRLLGYFVGCFDQLCS*KPFVIC Trigger: ACATATAACAAATGGTTTGCAGGAGCACAGCTGATC...AAAACAGCCAACAAAATAACCAAGTAGCCTCAATGTGTAAAGGTGTTTGTTCCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124546.8 |
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| 3UTR-3UTR CAA 90 bp | ATCCTGTCTGAGTTCTGCAGTAAGTCTGTCTCAGCGCCCTCAGGGAGAGACAGGATGATTAAGAATAATTaGGGGGACAGGGTGTCCAAT | + |
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Preference number: 3 (lower is better) Translates to: ILSEFCSKSVSAPSGRDRMIKNN*GDRVSN Trigger: ATTGGACACCCTGTCCCCCAAATTATTCTTAATCAT...CCTGTCTCTCCCTGAGGGCGCTGAGACAGACTTACTGCAGAACTCAGACAGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124546.8 |
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| 3UTR TCA 72 bp | TGTTCTTCTGAGTGTGGAACAGGAAGAAGAGACAGCTaGCTCCAAAGTGTTGACAATGCTAGTCCAACGGAG | + |
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Preference number: 3 (lower is better) Translates to: CSSECGTGRRDS*LQSVDNASPTE Trigger: CTCCGTTGGACTAGCATTGTCAACACTTTGGAGTCAGCTGTCTCTTCTTCCTGTTCCACACTCAGAAGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124546.8 |
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| 3UTR TCA 72 bp | TGCAAAACACCGAAAAGGGTCATTTCCAACGTCTTCTaGCTGTTCGAGGAATTGTGCTGTCAGCAAAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: CKTPKRVISNVF*LFEELCCQQRA Trigger: TGCCCTTTGCTGACAGCACAATTCCTCGAACAGTCAGAAGACGTTGGAAATGACCCTTTTCGGTGTTTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124546.8 |
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| 3UTR CCA 72 bp | TGTTCAACTGCAGAAGGTACGATGGGCTTAAGACCATaGGCAGCTGATCAATACCGATGCCCTGAACAAATA | + |
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Preference number: 3 (lower is better) Translates to: CSTAEGTMGLRP*AADQYRCPEQI Trigger: TATTTGTTCAGGGCATCGGTATTGATCAGCTGCCCATGGTCTTAAGCCCATCGTACCTTCTGCAGTTGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124546.8 |
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| 3UTR GCA 72 bp | AATAAATTTAATGAAGCCATAATCCTGTCTGAGTTCTaGAGTAAGTCTGTCTCAGCGCCCTCAGGGAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: NKFNEAIILSEF*SKSVSAPSGRD Trigger: GTCTCTCCCTGAGGGCGCTGAGACAGACTTACTGCAGAACTCAGACAGGATTATGGCTTCATTAAATTTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124546.8 |
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| 3UTR-3UTR CAA 90 bp | TCAGGAGGCATAGAAGGGATTTCTTCTCCACCTACAGTCACGGAACAAACACCTAGACTGTTCTGTTCTTaGCAGAAACACTTCAATATG | + |
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Preference number: 3 (lower is better) Translates to: SGGIEGISSPPTVTEQTPRLFCS*QKHFNM Trigger: CATATTGAAGTGTTTCTGCAAAGAACAGAACAGTCT...AGGTGTTTGTTCCGTGACTGTAGGTGGAGAAGAAATCCCTTCTATGCCTCCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124546.8 |
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| 3UTR-3UTR CAA 90 bp | CGGAACAAACACCTTTACACATTGAGGCTACTTGGTTATTTTGTTGGCTGTTTTGACTCTGCCAGTTGTTaGTCTTCTTCTTCTTCAAAT | + |
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Preference number: 3 (lower is better) Translates to: RNKHLYTLRLLGYFVGCFDSASC*SSSSSN Trigger: ATTTGAAGAAGAAGAAGACAAACAACTGGCAGAGTC...AAAACAGCCAACAAAATAACCAAGTAGCCTCAATGTGTAAAGGTGTTTGTTCCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124546.8 |
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| 3UTR TCA 72 bp | TCCACCTACAGTCACGGAACAAACACCTTTACACATTaGGGCTACTTGGTTATTTTGTTGGCTGTTTTTAAT | + |
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Preference number: 3 (lower is better) Translates to: STYSHGTNTFTH*GYLVILLAVFN Trigger: ATTAAAAACAGCCAACAAAATAACCAAGTAGCCTCAATGTGTAAAGGTGTTTGTTCCGTGACTGTAGGTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124546.8 |
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| CDS-3UTR CCA 90 bp | TTTCCGGAGGGCTCTTCAATGAGTTCAAGCAAACCCAACAACAATTCCTTTGGAGAGGCATCGAACAACTaGACCAACAAGATTCCACCC | + |
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Preference number: 4 (lower is better) Translates to: FPEGSSMSSSKPNNNSFGEASNN*TNKIPP Trigger: GGGTGGAATCTTGTTGGTCCAGTTGTTCGATGCCTC...TCCAAAGGAATTGTTGTTGGGTTTGCTTGAACTCATTGAAGAGCCCTCCGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124546.8 |
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| CDS-3UTR GCA 90 bp | AGGTCTAACAGAGAGATCAGCTGTGCTCCTGCAAACCATTTGTTATATGTTTTCTTTTATCCTCTTCTCTaGCCCTCAGGAGGCATCGAA | + |
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Preference number: 4 (lower is better) Translates to: RSNREISCAPANHLLYVFFYPLL*PSGGIE Trigger: TTCGATGCCTCCTGAGGGGCAGAGAAGAGGATAAAA...GAAAACATATAACAAATGGTTTGCAGGAGCACAGCTGATCTCTCTGTTAGACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124546.8 |
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| CDS-3UTR GCA 90 bp | TCAGGAGGCATAGAAGGGATTTCTTCTCCACCTACAGTCACGGAACAAACACCTTATAACCATCTTCAATaGATCTTTGACCTGCTAACT | + |
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Preference number: 4 (lower is better) Translates to: SGGIEGISSPPTVTEQTPYNHLQ*IFDLLT Trigger: AGTTAGCAGGTCAAAGATGCATTGAAGATGGTTATA...AGGTGTTTGTTCCGTGACTGTAGGTGGAGAAGAAATCCCTTCTATGCCTCCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124546.8 |
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| CDS-3UTR GCA 90 bp | AACACTGACAGAGGCCATAATCATCTGCCTGAATTTGTTCTTCTGAGTGTGGAAGACATCTTTTTATTATaGTCTGAAGTTCCTCCACAG | + |
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Preference number: 4 (lower is better) Translates to: NTDRGHNHLPEFVLLSVEDIFLL*SEVPPQ Trigger: CTGTGGAGGAACTTCAGAGCATAATAAAAAGATGTC...TTCCACACTCAGAAGAACAAATTCAGGCAGATGATTATGGCCTCTGTCAGTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124546.8 |
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| CDS-3UTR TCA 90 bp | AGGTCTAACAGAGAGATCAGCTGTGCTCCTGCAAACCATTTGTTATATGTTTTCTTGTTCTTTTCATCTTaGATAATCTCTAGCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: RSNREISCAPANHLLYVFLFFSS*IISSSW Trigger: CCAGCTGCTAGAGATTATTCAAGATGAAAAGAACAA...GAAAACATATAACAAATGGTTTGCAGGAGCACAGCTGATCTCTCTGTTAGACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124546.8 |
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| 3UTR CAA 72 bp | TTCCAATCCTTTGGAGTAAATAGACTGTTCTGTTCTTaGCAGAAACACTTCAATATGCTCCATGTTCAACTG | + |
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Preference number: 4 (lower is better) Translates to: FQSFGVNRLFCS*QKHFNMLHVQL Trigger: CAGTTGAACATGGAGCATATTGAAGTGTTTCTGCAAAGAACAGAACAGTCTATTTACTCCAAAGGATTGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124546.8 |
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| CDS CCA 72 bp | ATCCTCTTCTCTGCCCCTCAGGAGGCATCGAACAACTaGACCAACAAGATTCCACCCCATAGACTTAATGAT | + |
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Preference number: 6 (lower is better) Translates to: ILFSAPQEASNN*TNKIPPHRLND Trigger: ATCATTAAGTCTATGGGGTGGAATCTTGTTGGTCCAGTTGTTCGATGCCTCCTGAGGGGCAGAGAAGAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000078021.13 ENSMUST00000082121.9 ENSMUST00000100949.10 ENSMUST00000124140.2 ENSMUST00000124546.8 |
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