Pregenerated sensors for GLIS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014303Ensembl transcript IDs: ENSMUST00000014447.13, ENSMUST00000141682.2
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGAGCACACAGTCCTCCAATGTCCTTGGTTTGTTGCACAAGCCCTaGGGTCGCTGGCTTGGGCAGAGCTCATGGGCAAGAGAGGCAGCA | + |
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Preference number: 1 (lower is better) Translates to: WSTQSSNVLGLLHKP*GRWLGQSSWAREAA Trigger: TGCTGCCTCTCTTGCCCATGAGCTCTGCCCAAGCCAGCGACCCCAGGGCTTGTGCAACAAACCAAGGACATTGGAGGACTGTGTGCTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR CCA 90 bp | CAGTCCTCCAATGTCCTTGGTTTGTTGCACAAGCCCTGGGGTCGCTaGCTTGGGCAGAGCTCATGGGCAAGAGAGGCAGCACCAAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: QSSNVLGLLHKPWGR*LGQSSWAREAAPRK Trigger: TTTTCTTGGTGCTGCCTCTCTTGCCCATGAGCTCTGCCCAAGCCAGCGACCCCAGGGCTTGTGCAACAAACCAAGGACATTGGAGGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR CCA 90 bp | AGAATGGCTCTTCTTGGACAGCAGGTCCAAGCCAAGTCCTCACTTTaGAGCCAGGAGGCCAGCACAGACCTTCTAGCACCATCCTTGCCA | + |
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Preference number: 1 (lower is better) Translates to: RMALLGQQVQAKSSL*SQEASTDLLAPSLP Trigger: TGGCAAGGATGGTGCTAGAAGGTCTGTGCTGGCCTCCTGGCTCCAAAGTGAGGACTTGGCTTGGACCTGCTGTCCAAGAAGAGCCATTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR GCA 90 bp | AAGCGCCTTTCCAATGAGTCTTCTTCCCTGCATCCCATTACTTGGTaGCCCCAAACCTGTAGCTGTGTCCCAAGCTTGAGAGCCCACGTG | + |
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Preference number: 1 (lower is better) Translates to: KRLSNESSSLHPITW*PQTCSCVPSLRAHV Trigger: CACGTGGGCTCTCAAGCTTGGGACACAGCTACAGGTTTGGGGGCACCAAGTAATGGGATGCAGGGAAGAAGACTCATTGGAAAGGCGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR CCA 90 bp | ACCATCCTTGCCACCTTGCCACCCAGCTTGTCTGGGGCTGCAGCTTaGCCCTGGGGCAGTAGGATATTATTGCTATTTCGCAGAAGAGTT | + |
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Preference number: 1 (lower is better) Translates to: TILATLPPSLSGAAA*PWGSRILLLFRRRV Trigger: AACTCTTCTGCGAAATAGCAATAATATCCTACTGCCCCAGGGCCAAGCTGCAGCCCCAGACAAGCTGGGTGGCAAGGTGGCAAGGATGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR CCA 90 bp | GAGTGGTCAGCTACCCCTCCTCTTTGGAAAGTATTGCCAACCCTCTaGCAGGAAAGAGAAGTGCTGGCAGAGCAGGCTTCTCTGCTAAGC | + |
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Preference number: 1 (lower is better) Translates to: EWSATPPLWKVLPTL*QEREVLAEQASLLS Trigger: GCTTAGCAGAGAAGCCTGCTCTGCCAGCACTTCTCTTTCCTGCCAGAGGGTTGGCAATACTTTCCAAAGAGGAGGGGTAGCTGACCACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR TCA 90 bp | ATCCCATTACTTGGTGCCCCCAAACCTGTAGCTGTGTCCCAAGCTTaGGAGCCCACGTGGTGTAGACTAGTGCCTTATAAGCTTCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: IPLLGAPKPVAVSQA*EPTWCRLVPYKLLQ Trigger: CTGCAGAAGCTTATAAGGCACTAGTCTACACCACGTGGGCTCTCAAGCTTGGGACACAGCTACAGGTTTGGGGGCACCAAGTAATGGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR GCA 90 bp | AGTCAGTGCTTTCTAGAAAGCGCCTTTCCAATGAGTCTTCTTCCCTaGATCCCATTACTTGGTGCCCCCAAACCTGTAGCTGTGTCCCAA | + |
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Preference number: 1 (lower is better) Translates to: SQCFLESAFPMSLLP*IPLLGAPKPVAVSQ Trigger: TTGGGACACAGCTACAGGTTTGGGGGCACCAAGTAATGGGATGCAGGGAAGAAGACTCATTGGAAAGGCGCTTTCTAGAAAGCACTGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR GCA 90 bp | CCTTCTGAAACAGAAAGGCAGTCTGAGAAAAAGACTAGACAGAACTaGTCAGAGGAACCACAGAGCCAAGGACCCACTAGCACCTCAGCA | + |
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Preference number: 1 (lower is better) Translates to: PSETERQSEKKTRQN*SEEPQSQGPTSTSA Trigger: TGCTGAGGTGCTAGTGGGTCCTTGGCTCTGTGGTTCCTCTGAGCAGTTCTGTCTAGTCTTTTTCTCAGACTGCCTTTCTGTTTCAGAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR CAA 90 bp | TCACTTTGGAGCCAGGAGGCCAGCACAGACCTTCTAGCACCATCCTaGCCACCTTGCCACCCAGCTTGTCTGGGGCTGCAGCTTGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: SLWSQEASTDLLAPS*PPCHPACLGLQLGP Trigger: AGGGCCAAGCTGCAGCCCCAGACAAGCTGGGTGGCAAGGTGGCAAGGATGGTGCTAGAAGGTCTGTGCTGGCCTCCTGGCTCCAAAGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR-3UTR TCA 90 bp | GGAGACCAGCTCCTTAACTTGCTCACAGCCCCATCAAGGAGAGCCAGCACAGCCAGCAAGAGGCAGGACTaGGCGTCCTGGGAGGACAGG | + |
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Preference number: 2 (lower is better) Translates to: GDQLLNLLTAPSRRASTASKRQD*ASWEDR Trigger: CCTGTCCTCCCAGGACGCTCAGTCCTGCCTCTTGCT...GGCTGTGCTGGCTCTCCTTGATGGGGCTGTGAGCAAGTTAAGGAGCTGGTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR-3UTR GCA 90 bp | GAGGCCTTAGCACCCAAGAGAATGGCTCTTCTTGGACAGCAGGTCCAAGCCAAGCAGCTTGTCTGGGGCTaGAGCTTGGCCCTGGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: EALAPKRMALLGQQVQAKQLVWG*SLALGQ Trigger: CTGCCCCAGGGCCAAGCTGCAGCCCCAGACAAGCTG...CTTGGCTTGGACCTGCTGTCCAAGAAGAGCCATTCTCTTGGGTGCTAAGGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR CAA 90 bp | CAGCACAGACCTTCTAGCACCATCCTTGCCACCTTGCCACCCAGCTaGTCTGGGGCTGCAGCTTGGCCCTGGGGCAGTAGGATATTATTG | + |
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Preference number: 2 (lower is better) Translates to: QHRPSSTILATLPPS*SGAAAWPWGSRILL Trigger: CAATAATATCCTACTGCCCCAGGGCCAAGCTGCAGCCCCAGACAAGCTGGGTGGCAAGGTGGCAAGGATGGTGCTAGAAGGTCTGTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR CAA 90 bp | CAGCTAGCCTTTTGGAGCTATGGAGCACACAGTCCTCCAATGTCCTaGGTTTGTTGCACAAGCCCTGGGGTCGCTGGCTTGGGCAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: QLAFWSYGAHSPPMS*VCCTSPGVAGLGRA Trigger: AGCTCTGCCCAAGCCAGCGACCCCAGGGCTTGTGCAACAAACCAAGGACATTGGAGGACTGTGTGCTCCATAGCTCCAAAAGGCTAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR-3UTR GCA 90 bp | CGCTGGCTTGGGCAGAGCTCATGGGCAAGAGAGGCAGCACCAAGAAAAGGGTTCCAGCAGTGTCTGTCTTaGTCTCCCTCTAGAGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: RWLGQSSWAREAAPRKGFQQCLS*SPSRGG Trigger: TCCACCTCTAGAGGGAGAGCAAGACAGACACTGCTG...GAACCCTTTTCTTGGTGCTGCCTCTCTTGCCCATGAGCTCTGCCCAAGCCAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR CAA 90 bp | GAGGAACCACAGAGCCAAGGACCCACTAGCACCTCAGCAGCTCTCTaGTTCTACAGATGGGGACATGAGGGGCTTAGCCACTGCAGCATA | + |
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Preference number: 2 (lower is better) Translates to: EEPQSQGPTSTSAAL*FYRWGHEGLSHCSI Trigger: TATGCTGCAGTGGCTAAGCCCCTCATGTCCCCATCTGTAGAACAAGAGAGCTGCTGAGGTGCTAGTGGGTCCTTGGCTCTGTGGTTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR-3UTR CCA 90 bp | CGCTGGCTTGGGCAGAGCTCATGGGCAAGAGAGGCAGCACCAAGAAAAGGGTTCGAGAATGGCTCTTCTTaGACAGCAGGTCCAAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: RWLGQSSWAREAAPRKGFENGSS*TAGPSQ Trigger: TTGGCTTGGACCTGCTGTCCAAGAAGAGCCATTCTC...GAACCCTTTTCTTGGTGCTGCCTCTCTTGCCCATGAGCTCTGCCCAAGCCAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR-3UTR CCA 90 bp | GGAGACCAGCTCCTTAACTTGCTCACAGCCCCATCAAGGAGAGCCAGCACAGCCGCTACCCCTCCTCTTTaGAAAGTATTGCCAACCCTC | + |
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Preference number: 2 (lower is better) Translates to: GDQLLNLLTAPSRRASTAATPPL*KVLPTL Trigger: GAGGGTTGGCAATACTTTCCAAAGAGGAGGGGTAGC...GGCTGTGCTGGCTCTCCTTGATGGGGCTGTGAGCAAGTTAAGGAGCTGGTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR-3UTR CCA 90 bp | TTTGGAAAGTATTGCCAACCCTCTGGCAGGAAAGAGAAGTGCTGGCAGAGCAGGGCCAAGTCCTCACTTTaGAGCCAGGAGGCCAGCACA | + |
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Preference number: 2 (lower is better) Translates to: FGKYCQPSGRKEKCWQSRAKSSL*SQEAST Trigger: TGTGCTGGCCTCCTGGCTCCAAAGTGAGGACTTGGC...CCTGCTCTGCCAGCACTTCTCTTTCCTGCCAGAGGGTTGGCAATACTTTCCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR-3UTR TCA 90 bp | GCTAATGTCCAGTGCTCTGTTCTTCTCCTTGGCTTGAGTCTCAAACCAAATCCCCTGGGGGCTCCTAGCTaGCAAGTAGGTAAGGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: ANVQCSVLLLGLSLKPNPLGAPS*QVGKAG Trigger: CCCTGCCTTACCTACTTGTCAGCTAGGAGCCCCCAG...GGGATTTGGTTTGAGACTCAAGCCAAGGAGAAGAACAGAGCACTGGACATTAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR-3UTR TCA 90 bp | GCTAATGTCCAGTGCTCTGTTCTTCTCCTTGGCTTGAGTCTCAAACCAAATCCCGCCAGGTCAGCACAGTaGCCCTTGTACCTGCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: ANVQCSVLLLGLSLKPNPARSAQ*PLYLPA Trigger: TGCAGGCAGGTACAAGGGTCACTGTGCTGACCTGGC...GGGATTTGGTTTGAGACTCAAGCCAAGGAGAAGAACAGAGCACTGGACATTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR-3UTR GCA 90 bp | CGCTGGCTTGGGCAGAGCTCATGGGCAAGAGAGGCAGCACCAAGAAAAGGGTTCCTCTTTGGAAAGTATTaGCAACCCTCTGGCAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: RWLGQSSWAREAAPRKGFLFGKY*QPSGRK Trigger: TTTCCTGCCAGAGGGTTGGCAATACTTTCCAAAGAG...GAACCCTTTTCTTGGTGCTGCCTCTCTTGCCCATGAGCTCTGCCCAAGCCAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR-3UTR CCA 90 bp | TGGAAAGTATTGCCAACCCTCTGGCAGGAAAGAGAAGTGCTGGCAGAGCAGGCTGCTGCAGCTTGGCCCTaGGGCAGTAGGATATTATTG | + |
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Preference number: 2 (lower is better) Translates to: WKVLPTLWQEREVLAEQAAAAWP*GSRILL Trigger: CAATAATATCCTACTGCCCCAGGGCCAAGCTGCAGC...AGCCTGCTCTGCCAGCACTTCTCTTTCCTGCCAGAGGGTTGGCAATACTTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR-3UTR CCA 90 bp | CTATCACTTGAGTCACATGCTGAGCTAATGTCCAGTGCTCTGTTCTTCTCCTTGCTGGGGTCGCTGGCTTaGGCAGAGCTCATGGGCAAG | + |
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Preference number: 2 (lower is better) Translates to: LSLESHAELMSSALFFSLLGSLA*AELMGK Trigger: CTTGCCCATGAGCTCTGCCCAAGCCAGCGACCCCAG...CAAGGAGAAGAACAGAGCACTGGACATTAGCTCAGCATGTGACTCAAGTGATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR-3UTR CCA 90 bp | GACTTAAGGCCTAGGACCCTAATAGAGCCAGGAGTTGCTTGGATCCTAGGCAGAGGGCAGCTAGCCTTTTaGAGCTATGGAGCACACAGT | + |
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Preference number: 2 (lower is better) Translates to: DLRPRTLIEPGVAWILGRGQLAF*SYGAHS Trigger: ACTGTGTGCTCCATAGCTCCAAAAGGCTAGCTGCCC...TCTGCCTAGGATCCAAGCAACTCCTGGCTCTATTAGGGTCCTAGGCCTTAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR-3UTR GCA 90 bp | GGACTGGAACCCTGCCCAGCCAGGGTGGCCATAGAGAGGAACGCACCAGAGCAAGCAGTAGGATATTATTaGTATTTCGCAGAAGAGTTT | + |
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Preference number: 2 (lower is better) Translates to: GLEPCPARVAIERNAPEQAVGYY*YFAEEF Trigger: AAACTCTTCTGCGAAATAGCAATAATATCCTACTGC...TTGCTCTGGTGCGTTCCTCTCTATGGCCACCCTGGCTGGGCAGGGTTCCAGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR-3UTR GCA 90 bp | GACTTAAGGCCTAGGACCCTAATAGAGCCAGGAGTTGCTTGGATCCTAGGCAGACATCCCATTACTTGGTaGCCCCAAACCTGTAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: DLRPRTLIEPGVAWILGRHPITW*PQTCSC Trigger: ACAGCTACAGGTTTGGGGGCACCAAGTAATGGGATG...TCTGCCTAGGATCCAAGCAACTCCTGGCTCTATTAGGGTCCTAGGCCTTAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR-3UTR TCA 90 bp | GCTAATGTCCAGTGCTCTGTTCTTCTCCTTGGCTTGAGTCTCAAACCAAATCCCAAAGCGCCTTTCCAATaGGTCTTCTTCCCTGCATCC | + |
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Preference number: 2 (lower is better) Translates to: ANVQCSVLLLGLSLKPNPKAPFQ*VFFPAS Trigger: GGATGCAGGGAAGAAGACTCATTGGAAAGGCGCTTT...GGGATTTGGTTTGAGACTCAAGCCAAGGAGAAGAACAGAGCACTGGACATTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR-3UTR CCA 90 bp | GCTAATGTCCAGTGCTCTGTTCTTCTCCTTGGCTTGAGTCTCAAACCAAATCCCGTATTGCCAACCCTCTaGCAGGAAAGAGAAGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: ANVQCSVLLLGLSLKPNPVLPTL*QEREVL Trigger: CAGCACTTCTCTTTCCTGCCAGAGGGTTGGCAATAC...GGGATTTGGTTTGAGACTCAAGCCAAGGAGAAGAACAGAGCACTGGACATTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR-3UTR CCA 90 bp | CTATCACTTGAGTCACATGCTGAGCTAATGTCCAGTGCTCTGTTCTTCTCCTTGAAGAACCCTGCCAGATaGCCAGGCCTTTCTCTAGCT | + |
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Preference number: 2 (lower is better) Translates to: LSLESHAELMSSALFFSLKNPAR*PGLSLA Trigger: AGCTAGAGAAAGGCCTGGCCATCTGGCAGGGTTCTT...CAAGGAGAAGAACAGAGCACTGGACATTAGCTCAGCATGTGACTCAAGTGATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR-3UTR CAA 90 bp | GGAGACCAGCTCCTTAACTTGCTCACAGCCCCATCAAGGAGAGCCAGCACAGCCACCTTGCCACCCAGCTaGTCTGGGGCTGCAGCTTGG | + |
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Preference number: 3 (lower is better) Translates to: GDQLLNLLTAPSRRASTATLPPS*SGAAAW Trigger: CCAAGCTGCAGCCCCAGACAAGCTGGGTGGCAAGGT...GGCTGTGCTGGCTCTCCTTGATGGGGCTGTGAGCAAGTTAAGGAGCTGGTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR CCA 72 bp | CCTTGGTTTGTTGCACAAGCCCTGGGGTCGCTGGCTTaGGCAGAGCTCATGGGCAAGAGAGGCAGCACCAAG | + |
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Preference number: 3 (lower is better) Translates to: PWFVAQALGSLA*AELMGKRGSTK Trigger: CTTGGTGCTGCCTCTCTTGCCCATGAGCTCTGCCCAAGCCAGCGACCCCAGGGCTTGTGCAACAAACCAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR GCA 72 bp | CCGGGCCAGGTCAGCACAGTGACCCTTGTACCTGCCTaGACATCCCCAAGGAGAAGGTTGAGTGGTCAGCTA | + |
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Preference number: 3 (lower is better) Translates to: PGQVSTVTLVPA*TSPRRRLSGQL Trigger: TAGCTGACCACTCAACCTTCTCCTTGGGGATGTGCAGGCAGGTACAAGGGTCACTGTGCTGACCTGGCCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR CCA 72 bp | CACAAGCCCTGGGGTCGCTGGCTTGGGCAGAGCTCATaGGCAAGAGAGGCAGCACCAAGAAAAGGGTTCAAC | + |
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Preference number: 3 (lower is better) Translates to: HKPWGRWLGQSS*AREAAPRKGFN Trigger: GTTGAACCCTTTTCTTGGTGCTGCCTCTCTTGCCCATGAGCTCTGCCCAAGCCAGCGACCCCAGGGCTTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR-3UTR CAA 90 bp | GGAGACCAGCTCCTTAACTTGCTCACAGCCCCATCAAGGAGAGCCAGCACAGCCTCCCCAAGGAGAAGGTaGAGTGGTCAGCTACCCCTC | + |
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Preference number: 3 (lower is better) Translates to: GDQLLNLLTAPSRRASTASPRRR*SGQLPL Trigger: GAGGGGTAGCTGACCACTCAACCTTCTCCTTGGGGA...GGCTGTGCTGGCTCTCCTTGATGGGGCTGTGAGCAAGTTAAGGAGCTGGTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR CCA 72 bp | AATGTCCTTGGTTTGTTGCACAAGCCCTGGGGTCGCTaGCTTGGGCAGAGCTCATGGGCAAGAGAGGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: NVLGLLHKPWGR*LGQSSWAREAA Trigger: TGCTGCCTCTCTTGCCCATGAGCTCTGCCCAAGCCAGCGACCCCAGGGCTTGTGCAACAAACCAAGGACATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR GCA 72 bp | TATGGAGCACACAGTCCTCCAATGTCCTTGGTTTGTTaGACAAGCCCTGGGGTCGCTGGCTTGGGCAGAGCT | + |
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Preference number: 3 (lower is better) Translates to: YGAHSPPMSLVC*TSPGVAGLGRA Trigger: AGCTCTGCCCAAGCCAGCGACCCCAGGGCTTGTGCAACAAACCAAGGACATTGGAGGACTGTGTGCTCCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR CCA 72 bp | TTTGGAGCTATGGAGCACACAGTCCTCCAATGTCCTTaGTTTGTTGCACAAGCCCTGGGGTCGCTGGCTTGG | + |
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Preference number: 3 (lower is better) Translates to: FGAMEHTVLQCP*FVAQALGSLAW Trigger: CCAAGCCAGCGACCCCAGGGCTTGTGCAACAAACCAAGGACATTGGAGGACTGTGTGCTCCATAGCTCCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR CCA 72 bp | GACAGCAAGAAGCCCAAGCTGGGGCAGCTAGCCTTTTaGAGCTATGGAGCACACAGTCCTCCAATGTCCTTG | + |
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Preference number: 3 (lower is better) Translates to: DSKKPKLGQLAF*SYGAHSPPMSL Trigger: CAAGGACATTGGAGGACTGTGTGCTCCATAGCTCCAAAAGGCTAGCTGCCCCAGCTTGGGCTTCTTGCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR TCA 72 bp | CTTGGTGCCCCCAAACCTGTAGCTGTGTCCCAAGCTTaGGAGCCCACGTGGTGTAGACTAGTGCCTTATAAG | + |
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Preference number: 3 (lower is better) Translates to: LGAPKPVAVSQA*EPTWCRLVPYK Trigger: CTTATAAGGCACTAGTCTACACCACGTGGGCTCTCAAGCTTGGGACACAGCTACAGGTTTGGGGGCACCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR GCA 72 bp | GGGCTGCAGCTTGGCCCTGGGGCAGTAGGATATTATTaGTATTTCGCAGAAGAGTTTCTGTTCGTCGGGGGA | + |
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Preference number: 3 (lower is better) Translates to: GLQLGPGAVGYY*YFAEEFLFVGG Trigger: TCCCCCGACGAACAGAAACTCTTCTGCGAAATAGCAATAATATCCTACTGCCCCAGGGCCAAGCTGCAGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR TCA 72 bp | CCCTTGTACCTGCCTGCACATCCCCAAGGAGAAGGTTaGGTGGTCAGCTACCCCTCCTCTTTGGAAAGTATT | + |
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Preference number: 3 (lower is better) Translates to: PLYLPAHPQGEG*VVSYPSSLESI Trigger: AATACTTTCCAAAGAGGAGGGGTAGCTGACCACTCAACCTTCTCCTTGGGGATGTGCAGGCAGGTACAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR GCA 72 bp | TTGAGTGGTCAGCTACCCCTCCTCTTTGGAAAGTATTaGCAACCCTCTGGCAGGAAAGAGAAGTGCTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: LSGQLPLLFGKY*QPSGRKEKCWQ Trigger: CTGCCAGCACTTCTCTTTCCTGCCAGAGGGTTGGCAATACTTTCCAAAGAGGAGGGGTAGCTGACCACTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR CCA 72 bp | TTAAGGCCTAGGACCCTAATAGAGCCAGGAGTTGCTTaGATCCTAGGCAGACCCAAAGGTAGGAGACCAGCT | + |
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Preference number: 3 (lower is better) Translates to: LRPRTLIEPGVA*ILGRPKGRRPA Trigger: AGCTGGTCTCCTACCTTTGGGTCTGCCTAGGATCCAAGCAACTCCTGGCTCTATTAGGGTCCTAGGCCTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR GCA 90 bp | GGACTGGAACCCTGCCCAGCCAGGGTGGCCATAGAGAGGAACGCACCAGAGCAAGGGGGTGGGCGCAGCTaGAGGAGCTCCTGCTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: GLEPCPARVAIERNAPEQGGGRS*RSSCCS Trigger: TGAGCAGCAGGAGCTCCTGCAGCTGCGCCCACCCCC...TTGCTCTGGTGCGTTCCTCTCTATGGCCACCCTGGCTGGGCAGGGTTCCAGTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CCA 90 bp | GGTAAGGCAGGGAGGACTGGAACCCTGCCCAGCCAGGGTGGCCATAGAGAGGAATTGAAGCCACGGCCATaGCGGGCGCAGCCCTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: GKAGRTGTLPSQGGHREELKPRP*RAQPSQ Trigger: TTGGGAGGGCTGCGCCCGCCATGGCCGTGGCTTCAA...TTCCTCTCTATGGCCACCCTGGCTGGGCAGGGTTCCAGTCCTCCCTGCCTTACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR TCA 90 bp | GGACTGGAACCCTGCCCAGCCAGGGTGGCCATAGAGAGGAACGCACCAGAGCAATCCAGGGGCGTCTTGTaGTCTTCCAGGCCCAGGACC | + |
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Preference number: 4 (lower is better) Translates to: GLEPCPARVAIERNAPEQSRGVL*SSRPRT Trigger: GGTCCTGGGCCTGGAAGATCACAAGACGCCCCTGGA...TTGCTCTGGTGCGTTCCTCTCTATGGCCACCCTGGCTGGGCAGGGTTCCAGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR GCA 90 bp | GAGGCAGGACTGAGCGTCCTGGGAGGACAGGCAAAGGCCTCACCCAGACTACAGGAGGAAGCAGGTAGGTaGAGAGCCCCACCAGAACCC | + |
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Preference number: 4 (lower is better) Translates to: EAGLSVLGGQAKASPRLQEEAGR*RAPPEP Trigger: GGGTTCTGGTGGGGCTCTGCACCTACCTGCTTCCTC...CTGTAGTCTGGGTGAGGCCTTTGCCTGTCCTCCCAGGACGCTCAGTCCTGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CCA 90 bp | CCAGCCAGGGTGGCCATAGAGAGGAACGCACCAGAGCAAGAGGCAGGACTGAGCGGGAGCTGCTGCCATTaGGAGAGTCCAGTCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PARVAIERNAPEQEAGLSGSCCH*ESPVQR Trigger: CCTCTGGACTGGACTCTCCCAATGGCAGCAGCTCCC...GCTCAGTCCTGCCTCTTGCTCTGGTGCGTTCCTCTCTATGGCCACCCTGGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CCA 90 bp | CACAGACCTTCTAGCACCATCCTTGCCACCTTGCCACCCAGCTTGTCTGGGGCTCCAGGCCCAGGACCCTaGCAGGTACTGACCCACGAC | + |
|
Preference number: 4 (lower is better) Translates to: HRPSSTILATLPPSLSGAPGPGP*QVLTHD Trigger: GTCGTGGGTCAGTACCTGCCAGGGTCCTGGGCCTGG...AGCCCCAGACAAGCTGGGTGGCAAGGTGGCAAGGATGGTGCTAGAAGGTCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
||
| CDS-3UTR CCA 90 bp | GGACTGGAACCCTGCCCAGCCAGGGTGGCCATAGAGAGGAACGCACCAGAGCAAAAGTCCCCATTGCCCTaGCACTCAGGAGACAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLEPCPARVAIERNAPEQKSPLP*HSGDRE Trigger: CTCCCTGTCTCCTGAGTGCCAGGGCAATGGGGACTT...TTGCTCTGGTGCGTTCCTCTCTATGGCCACCCTGGCTGGGCAGGGTTCCAGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CCA 90 bp | GGTAAGGCAGGGAGGACTGGAACCCTGCCCAGCCAGGGTGGCCATAGAGAGGAACACAGCAGTAGGCAGTaGAGGCAAGTCCCCATTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GKAGRTGTLPSQGGHREEHSSRQ*RQVPIA Trigger: GGCAATGGGGACTTGCCTCCACTGCCTACTGCTGTG...TTCCTCTCTATGGCCACCCTGGCTGGGCAGGGTTCCAGTCCTCCCTGCCTTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CCA 90 bp | GGAGACCAGCTCCTTAACTTGCTCACAGCCCCATCAAGGAGAGCCAGCACAGCCGACACACCAGCTGCTTaGCCAGGGGCAGCTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GDQLLNLLTAPSRRASTADTPAA*PGAALV Trigger: CACCAGAGCTGCCCCTGGCCAAGCAGCTGGTGTGTC...GGCTGTGCTGGCTCTCCTTGATGGGGCTGTGAGCAAGTTAAGGAGCTGGTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CCA 90 bp | CACAGACCTTCTAGCACCATCCTTGCCACCTTGCCACCCAGCTTGTCTGGGGCTTGGTGGTTTAGGGGGTaGGCGCAGCTGCAGGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HRPSSTILATLPPSLSGAWWFRG*AQLQEL Trigger: GAGCTCCTGCAGCTGCGCCCACCCCCTAAACCACCA...AGCCCCAGACAAGCTGGGTGGCAAGGTGGCAAGGATGGTGCTAGAAGGTCTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CCA 90 bp | CACAGACCTTCTAGCACCATCCTTGCCACCTTGCCACCCAGCTTGTCTGGGGCTAGGAGTGGGCAGTGGTaGTTTAGGGGGTGGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HRPSSTILATLPPSLSGARSGQW*FRGWAQ Trigger: CTGCGCCCACCCCCTAAACCACCACTGCCCACTCCT...AGCCCCAGACAAGCTGGGTGGCAAGGTGGCAAGGATGGTGCTAGAAGGTCTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CCA 90 bp | CGCTGGCTTGGGCAGAGCTCATGGGCAAGAGAGGCAGCACCAAGAAAAGGGTTCGCAGGCCAGGCAGACTaGGGCCTCCAAAAAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RWLGQSSWAREAAPRKGFAGQAD*GLQKGQ Trigger: CTGCCCTTTTTGGAGGCCCCAGTCTGCCTGGCCTGC...GAACCCTTTTCTTGGTGCTGCCTCTCTTGCCCATGAGCTCTGCCCAAGCCAGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR TCA 90 bp | CGCTGGCTTGGGCAGAGCTCATGGGCAAGAGAGGCAGCACCAAGAAAAGGGTTCGCGCAGCCCTCCCAATaGCAGCAGTATCGAGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RWLGQSSWAREAAPRKGFAQPSQ*QQYRAS Trigger: GGATGCTCGATACTGCTGTCATTGGGAGGGCTGCGC...GAACCCTTTTCTTGGTGCTGCCTCTCTTGCCCATGAGCTCTGCCCAAGCCAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR TCA 90 bp | CACAGACCTTCTAGCACCATCCTTGCCACCTTGCCACCCAGCTTGTCTGGGGCTGGGTACGGGTGTGCTTaGAGCGGTCACTGGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HRPSSTILATLPPSLSGAGYGCA*SGHWSW Trigger: CCAACTCCAGTGACCGCTTCAAGCACACCCGTACCC...AGCCCCAGACAAGCTGGGTGGCAAGGTGGCAAGGATGGTGCTAGAAGGTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CCA 90 bp | CCAGCCAGGGTGGCCATAGAGAGGAACGCACCAGAGCAAGAGGCAGGACTGAGCGTCCAGTACAGTGCCTaGGAGCAAAGGGAGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: PARVAIERNAPEQEAGLSVQYSA*EQRESI Trigger: GATGGACTCCCTTTGCTCCCAGGCACTGTACTGGAC...GCTCAGTCCTGCCTCTTGCTCTGGTGCGTTCCTCTCTATGGCCACCCTGGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
||
| CDS-3UTR TCA 90 bp | ACAGCAGGTCCAAGCCAAGTCCTCACTTTGGAGCCAGGAGGCCAGCACAGACCTCCGCTCGGAGCTTGGTaGTGCTCAGCTTTAGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TAGPSQVLTLEPGGQHRPPLGAW*CSALGR Trigger: TCGACCTAAAGCTGAGCATCACCAAGCTCCGAGCGG...AGGTCTGTGCTGGCCTCCTGGCTCCAAAGTGAGGACTTGGCTTGGACCTGCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR TCA 90 bp | CACAGACCTTCTAGCACCATCCTTGCCACCTTGCCACCCAGCTTGTCTGGGGCTGGTTCTTGGCCAGATTaGGGGGCAGAACAGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HRPSSTILATLPPSLSGAGSWPD*GAEQSL Trigger: CAGGCTCTGTTCTGCCCCTCAATCTGGCCAAGAACC...AGCCCCAGACAAGCTGGGTGGCAAGGTGGCAAGGATGGTGCTAGAAGGTCTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR TCA 90 bp | CGCTGGCTTGGGCAGAGCTCATGGGCAAGAGAGGCAGCACCAAGAAAAGGGTTCCAGACCCTGGTGGAATaGCCACCCAGCCAGGAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RWLGQSSWAREAAPRKGFQTLVE*PPSQEL Trigger: TAACTCCTGGCTGGGTGGTCATTCCACCAGGGTCTG...GAACCCTTTTCTTGGTGCTGCCTCTCTTGCCCATGAGCTCTGCCCAAGCCAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR GCA 90 bp | CGCTGGCTTGGGCAGAGCTCATGGGCAAGAGAGGCAGCACCAAGAAAAGGGTTCGAGGCAAGTCCCCATTaGCCTGGCACTCAGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: RWLGQSSWAREAAPRKGFEASPH*PGTQET Trigger: TGTCTCCTGAGTGCCAGGGCAATGGGGACTTGCCTC...GAACCCTTTTCTTGGTGCTGCCTCTCTTGCCCATGAGCTCTGCCCAAGCCAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR GCA 90 bp | CTTTGGAAAGTATTGCCAACCCTCTGGCAGGAAAGAGAAGTGCTGGCAGAGCAGTTGGCCGGGAGCGGCTaGGCTCCGTCCTTTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LWKVLPTLWQEREVLAEQLAGSG*APSFPG Trigger: CCCTGGAAAGGACGGAGCGCAGCCGCTCCCGGCCAA...CTGCTCTGCCAGCACTTCTCTTTCCTGCCAGAGGGTTGGCAATACTTTCCAAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CCA 90 bp | GAGGCCTTAGCACCCAAGAGAATGGCTCTTCTTGGACAGCAGGTCCAAGCCAAGCAGCAGGAAACCTGGTaGTGGAGAGCCTGGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EALAPKRMALLGQQVQAKQQETW*WRAWGA Trigger: GGCTCCCCAGGCTCTCCACCACCAGGTTTCCTGCTG...CTTGGCTTGGACCTGCTGTCCAAGAAGAGCCATTCTCTTGGGTGCTAAGGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR TCA 90 bp | CACAGACCTTCTAGCACCATCCTTGCCACCTTGCCACCCAGCTTGTCTGGGGCTAGTGGCCATGGGCCTTaGTGTGTTTGCGCAGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HRPSSTILATLPPSLSGASGHGP*CVCAVN Trigger: GTTCACTGCGCAAACACATCAAGGCCCATGGCCACT...AGCCCCAGACAAGCTGGGTGGCAAGGTGGCAAGGATGGTGCTAGAAGGTCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR GCA 90 bp | GGTAAGGCAGGGAGGACTGGAACCCTGCCCAGCCAGGGTGGCCATAGAGAGGAATTCTCTCTTCTCTCTTaGCGCTCGGAGCTTGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GKAGRTGTLPSQGGHREEFSLLS*RSELGD Trigger: ATCACCAAGCTCCGAGCGGCAAGAGAGAAGAGAGAA...TTCCTCTCTATGGCCACCCTGGCTGGGCAGGGTTCCAGTCCTCCCTGCCTTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR CAA 72 bp | GAGCTATGGAGCACACAGTCCTCCAATGTCCTTGGTTaGTTGCACAAGCCCTGGGGTCGCTGGCTTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ELWSTQSSNVLG*LHKPWGRWLGQ Trigger: CTGCCCAAGCCAGCGACCCCAGGGCTTGTGCAACAAACCAAGGACATTGGAGGACTGTGTGCTCCATAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR TCA 90 bp | CTTTGGAAAGTATTGCCAACCCTCTGGCAGGAAAGAGAAGTGCTGGCAGAGCAGCAGGGGCAGCTCTGGTaGGAGGCACTTGTCCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LWKVLPTLWQEREVLAEQQGQLW*EALVLG Trigger: CCCAAGGACAAGTGCCTCTCACCAGAGCTGCCCCTG...CTGCTCTGCCAGCACTTCTCTTTCCTGCCAGAGGGTTGGCAATACTTTCCAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CCA 90 bp | CGCTGGCTTGGGCAGAGCTCATGGGCAAGAGAGGCAGCACCAAGAAAAGGGTTCGACACAAAGTGGCCATaGGCCTTGATGTGTTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RWLGQSSWAREAAPRKGFDTKWP*ALMCLR Trigger: GCGCAAACACATCAAGGCCCATGGCCACTTTGTGTC...GAACCCTTTTCTTGGTGCTGCCTCTCTTGCCCATGAGCTCTGCCCAAGCCAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR CAA 72 bp | CAGAGCCAAGGACCCACTAGCACCTCAGCAGCTCTCTaGTTCTACAGATGGGGACATGAGGGGCTTAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QSQGPTSTSAAL*FYRWGHEGLSH Trigger: GTGGCTAAGCCCCTCATGTCCCCATCTGTAGAACAAGAGAGCTGCTGAGGTGCTAGTGGGTCCTTGGCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR TCA 90 bp | GGAGACCAGCTCCTTAACTTGCTCACAGCCCCATCAAGGAGAGCCAGCACAGCCGTGTCCGGATGTGAATaGGCATCTTGTACCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GDQLLNLLTAPSRRASTAVSGCE*ASCTWH Trigger: ATGCCAGGTACAAGATGCTCATTCACATCCGGACAC...GGCTGTGCTGGCTCTCCTTGATGGGGCTGTGAGCAAGTTAAGGAGCTGGTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR TCA 90 bp | GGAGACCAGCTCCTTAACTTGCTCACAGCCCCATCAAGGAGAGCCAGCACAGCCGTGTGTGTCCGGATGTaGATGAGCATCTTGTACCTG | + |
|
Preference number: 4 (lower is better) Translates to: GDQLLNLLTAPSRRASTAVCVRM*MSILYL Trigger: CAGGTACAAGATGCTCATTCACATCCGGACACACAC...GGCTGTGCTGGCTCTCCTTGATGGGGCTGTGAGCAAGTTAAGGAGCTGGTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR TCA 90 bp | CTTTGGAAAGTATTGCCAACCCTCTGGCAGGAAAGAGAAGTGCTGGCAGAGCAGACCAGCCCCAAAGGGTaGGGGCAACAGCGGGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LWKVLPTLWQEREVLAEQTSPKG*GQQRVL Trigger: AAGAACCCGCTGTTGCCCTCACCCTTTGGGGCTGGT...CTGCTCTGCCAGCACTTCTCTTTCCTGCCAGAGGGTTGGCAATACTTTCCAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR GCA 90 bp | CTTTGGAAAGTATTGCCAACCCTCTGGCAGGAAAGAGAAGTGCTGGCAGAGCAGCATCGACACACCAGCTaGTTGGCCAGGGGCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LWKVLPTLWQEREVLAEQHRHTS*LARGSS Trigger: AGAGCTGCCCCTGGCCAAGCAGCTGGTGTGTCGATG...CTGCTCTGCCAGCACTTCTCTTTCCTGCCAGAGGGTTGGCAATACTTTCCAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR GCA 90 bp | GAGGCCTTAGCACCCAAGAGAATGGCTCTTCTTGGACAGCAGGTCCAAGCCAAGACAGGTCCAGTACAGTaGCTGGGAGCAAAGGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: EALAPKRMALLGQQVQAKTGPVQ*LGAKGV Trigger: GACTCCCTTTGCTCCCAGGCACTGTACTGGACCTGT...CTTGGCTTGGACCTGCTGTCCAAGAAGAGCCATTCTCTTGGGTGCTAAGGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CCA 90 bp | CGCTGGCTTGGGCAGAGCTCATGGGCAAGAGAGGCAGCACCAAGAAAAGGGTTCCCTTCTCAGGGAATTTaGGGTTCAGCAGGAAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: RWLGQSSWAREAAPRKGFPSQGI*GSAGNL Trigger: CAGGTTTCCTGCTGAACCCCAAATTCCCTGAGAAGG...GAACCCTTTTCTTGGTGCTGCCTCTCTTGCCCATGAGCTCTGCCCAAGCCAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR CAA 72 bp | GGGGCTGCAGCTTGGCCCTGGGGCAGTAGGATATTATaGCTATTTCGCAGAAGAGTTTCTGTTCGTCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GAAAWPWGSRIL*LFRRRVSVRRG Trigger: CCCCCGACGAACAGAAACTCTTCTGCGAAATAGCAATAATATCCTACTGCCCCAGGGCCAAGCTGCAGCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR TCA 90 bp | CCCAAGAGAATGGCTCTTCTTGGACAGCAGGTCCAAGCCAAGTCCTCACTTTGGTCTCGATGCAAAGCATaGTGCCGGACCACACCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PKRMALLGQQVQAKSSLWSRCKA*CRTTPS Trigger: ACTGGGTGTGGTCCGGCATCATGCTTTGCATCGAGA...CCAAAGTGAGGACTTGGCTTGGACCTGCTGTCCAAGAAGAGCCATTCTCTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR GCA 90 bp | GACTTAAGGCCTAGGACCCTAATAGAGCCAGGAGTTGCTTGGATCCTAGGCAGACAGGAGACAGGGAGCTaGTGCCATTGGGAGAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DLRPRTLIEPGVAWILGRQETGS*CHWESP Trigger: TGGACTCTCCCAATGGCAGCAGCTCCCTGTCTCCTG...TCTGCCTAGGATCCAAGCAACTCCTGGCTCTATTAGGGTCCTAGGCCTTAAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CCA 90 bp | TGGAAAGTATTGCCAACCCTCTGGCAGGAAAGAGAAGTGCTGGCAGAGCAGGCTGGTGCGGCTTCTCGTTaGTGTGTGTCCGGATGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WKVLPTLWQEREVLAEQAGAASR*CVSGCE Trigger: TTCACATCCGGACACACACCAACGAGAAGCCGCACC...AGCCTGCTCTGCCAGCACTTCTCTTTCCTGCCAGAGGGTTGGCAATACTTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CCA 90 bp | TGGAAAGTATTGCCAACCCTCTGGCAGGAAAGAGAAGTGCTGGCAGAGCAGGCTGTGTGGGAGCGGTTGTaGATCTTCAGGTTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WKVLPTLWQEREVLAEQAVWERL*IFRFSR Trigger: CCTGGAGAACCTGAAGATCCACAACCGCTCCCACAC...AGCCTGCTCTGCCAGCACTTCTCTTTCCTGCCAGAGGGTTGGCAATACTTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CCA 90 bp | ACAGCAGGTCCAAGCCAAGTCCTCACTTTGGAGCCAGGAGGCCAGCACAGACCTTCATGTGACACAAAGTaGCCATGGGCCTTGATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TAGPSQVLTLEPGGQHRPSCDTK*PWALMC Trigger: ACACATCAAGGCCCATGGCCACTTTGTGTCACATGA...AGGTCTGTGCTGGCCTCCTGGCTCCAAAGTGAGGACTTGGCTTGGACCTGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR GCA 90 bp | CCCAAGAGAATGGCTCTTCTTGGACAGCAGGTCCAAGCCAAGTCCTCACTTTGGTTAACACCTCTGGACTaGTGGCTGCTGAGTTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PKRMALLGQQVQAKSSLWLTPLD*WLLSCL Trigger: CAGGCAACTCAGCAGCCAGCAGTCCAGAGGTGTTAA...CCAAAGTGAGGACTTGGCTTGGACCTGCTGTCCAAGAAGAGCCATTCTCTTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CCA 90 bp | CTATCACTTGAGTCACATGCTGAGCTAATGTCCAGTGCTCTGTTCTTCTCCTTGCAGGAAACCTGGTGGTaGAGAGCCTGGGGAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLESHAELMSSALFFSLQETWW*RAWGAR Trigger: CCTGGCTCCCCAGGCTCTCCACCACCAGGTTTCCTG...CAAGGAGAAGAACAGAGCACTGGACATTAGCTCAGCATGTGACTCAAGTGATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
||
| CDS-3UTR CCA 90 bp | TTTGGAAAGTATTGCCAACCCTCTGGCAGGAAAGAGAAGTGCTGGCAGAGCAGGGGCTTCTCACCTGTGTaGGAGCGGTTGTGGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FGKYCQPSGRKEKCWQSRGFSPV*ERLWIF Trigger: GAAGATCCACAACCGCTCCCACACAGGTGAGAAGCC...CCTGCTCTGCCAGCACTTCTCTTTCCTGCCAGAGGGTTGGCAATACTTTCCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| 3UTR CAA 72 bp | ACCCTTGTACCTGCCTGCACATCCCCAAGGAGAAGGTaGAGTGGTCAGCTACCCCTCCTCTTTGGAAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TLVPACTSPRRR*SGQLPLLFGKY Trigger: ATACTTTCCAAAGAGGAGGGGTAGCTGACCACTCAACCTTCTCCTTGGGGATGTGCAGGCAGGTACAAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
||
| CDS-3UTR TCA 90 bp | GCTAATGTCCAGTGCTCTGTTCTTCTCCTTGGCTTGAGTCTCAAACCAAATCCCCTCCTGCTGCTCATGTaGCACAAAGTGGCCATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ANVQCSVLLLGLSLKPNPLLLLM*HKVAMG Trigger: GCCCATGGCCACTTTGTGTCACATGAGCAGCAGGAG...GGGATTTGGTTTGAGACTCAAGCCAAGGAGAAGAACAGAGCACTGGACATTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
||
| CDS-3UTR CCA 90 bp | CTTTGGAAAGTATTGCCAACCCTCTGGCAGGAAAGAGAAGTGCTGGCAGAGCAGAGCGGTCACTGGAGTTaGAGTAACGCTTGTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LWKVLPTLWQEREVLAEQSGHWS*SNACCS Trigger: GCTGCAACAAGCGTTACTCCAACTCCAGTGACCGCT...CTGCTCTGCCAGCACTTCTCTTTCCTGCCAGAGGGTTGGCAATACTTTCCAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
||
| CDS-3UTR CCA 90 bp | GCTAATGTCCAGTGCTCTGTTCTTCTCCTTGGCTTGAGTCTCAAACCAAATCCCACACCTCTGGACTGCTaGCTGCTGAGTTGCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ANVQCSVLLLGLSLKPNPTPLDC*LLSCLW Trigger: CCACAGGCAACTCAGCAGCCAGCAGTCCAGAGGTGT...GGGATTTGGTTTGAGACTCAAGCCAAGGAGAAGAACAGAGCACTGGACATTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
||
| CDS-3UTR TCA 90 bp | CTATCACTTGAGTCACATGCTGAGCTAATGTCCAGTGCTCTGTTCTTCTCCTTGCAGTCCAGAGGGTGGTaGCAAGCTGAGGTCCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSLESHAELMSSALFFSLQSRGW*QAEVHQ Trigger: TTGGTGGACCTCAGCTTGTCACCACCCTCTGGACTG...CAAGGAGAAGAACAGAGCACTGGACATTAGCTCAGCATGTGACTCAAGTGATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
||
| CDS-3UTR CCA 90 bp | GACTTAAGGCCTAGGACCCTAATAGAGCCAGGAGTTGCTTGGATCCTAGGCAGAAGGAGCTCAAAGAGCTaGTTACACTTGGCCCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: DLRPRTLIEPGVAWILGRRSSKS*LHLAHR Trigger: TCGATGGGCCAAGTGTAACCAGCTCTTTGAGCTCCT...TCTGCCTAGGATCCAAGCAACTCCTGGCTCTATTAGGGTCCTAGGCCTTAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
||
| CDS-3UTR CCA 90 bp | GCTAATGTCCAGTGCTCTGTTCTTCTCCTTGGCTTGAGTCTCAAACCAAATCCCCTGCTGAGTTGCCTGTaGACAGGTCCAGTACAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ANVQCSVLLLGLSLKPNPLLSCL*TGPVQC Trigger: GCACTGTACTGGACCTGTCCACAGGCAACTCAGCAG...GGGATTTGGTTTGAGACTCAAGCCAAGGAGAAGAACAGAGCACTGGACATTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
||
| CDS-3UTR GCA 90 bp | CTATCACTTGAGTCACATGCTGAGCTAATGTCCAGTGCTCTGTTCTTCTCCTTGTGCTGGCTGCTGAGTTaGCTGTGGACAGGTCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSLESHAELMSSALFFSLCWLLS*LWTGPV Trigger: TACTGGACCTGTCCACAGGCAACTCAGCAGCCAGCA...CAAGGAGAAGAACAGAGCACTGGACATTAGCTCAGCATGTGACTCAAGTGATAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CCA 90 bp | CTTTGGAAAGTATTGCCAACCCTCTGGCAGGAAAGAGAAGTGCTGGCAGAGCAGATCCAAATAGCGAAGTaGCTGGAAATCCACAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LWKVLPTLWQEREVLAEQIQIAK*LEIHSS Trigger: ACTGCTGTGGATTTCCAGCCACTTCGCTATTTGGAT...CTGCTCTGCCAGCACTTCTCTTTCCTGCCAGAGGGTTGGCAATACTTTCCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR TCA 90 bp | GCTAATGTCCAGTGCTCTGTTCTTCTCCTTGGCTTGAGTCTCAAACCAAATCCCTGTTCAGGCTTGACATaGTGGTCGTTGACATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ANVQCSVLLLGLSLKPNPCSGLT*WSLTWS Trigger: TGACCATGTCAACGACCATCATGTCAAGCCTGAACA...GGGATTTGGTTTGAGACTCAAGCCAAGGAGAAGAACAGAGCACTGGACATTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS TCA 90 bp | CTTGGCCGGGAGCGGCTGCGCTCCGTCCTTTCCAGGGGCGTCTTGTaGTCTTCCAGGCCCAGGACCCTGGCAGGTACTGACCCACGACCC | + |
|
Preference number: 5 (lower is better) Translates to: LGRERLRSVLSRGVL*SSRPRTLAGTDPRP Trigger: GGGTCGTGGGTCAGTACCTGCCAGGGTCCTGGGCCTGGAAGATCACAAGACGCCCCTGGAAAGGACGGAGCGCAGCCGCTCCCGGCCAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS TCA 90 bp | CAGGGGCGTCTTGTGATCTTCCAGGCCCAGGACCCTGGCAGGTACTaGCCCACGACCCTTCTCCCCCTCGGCCTTGCTACCGGCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QGRLVIFQAQDPGRY*PTTLLPLGLATGRA Trigger: GGCTCTGCCGGTAGCAAGGCCGAGGGGGAGAAGGGTCGTGGGTCAGTACCTGCCAGGGTCCTGGGCCTGGAAGATCACAAGACGCCCCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS GCA 90 bp | TGCCTGGGAGCAAAGGGAGTCCATCAGGGCTTGGCCGGGAGCGGCTaGGCTCCGTCCTTTCCAGGGGCGTCTTGTGATCTTCCAGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: CLGAKGVHQGLAGSG*APSFPGASCDLPGP Trigger: TGGGCCTGGAAGATCACAAGACGCCCCTGGAAAGGACGGAGCGCAGCCGCTCCCGGCCAAGCCCTGATGGACTCCCTTTGCTCCCAGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS CCA 90 bp | CAGGTCCAGTACAGTGCCTGGGAGCAAAGGGAGTCCATCAGGGCTTaGCCGGGAGCGGCTGCGCTCCGTCCTTTCCAGGGGCGTCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QVQYSAWEQRESIRA*PGAAALRPFQGRLV Trigger: CACAAGACGCCCCTGGAAAGGACGGAGCGCAGCCGCTCCCGGCCAAGCCCTGATGGACTCCCTTTGCTCCCAGGCACTGTACTGGACCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS GCA 90 bp | CTGGACTGCTGGCTGCTGAGTTGCCTGTGGACAGGTCCAGTACAGTaGCTGGGAGCAAAGGGAGTCCATCAGGGCTTGGCCGGGAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LDCWLLSCLWTGPVQ*LGAKGVHQGLAGSG Trigger: GCCGCTCCCGGCCAAGCCCTGATGGACTCCCTTTGCTCCCAGGCACTGTACTGGACCTGTCCACAGGCAACTCAGCAGCCAGCAGTCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS CCA 90 bp | CCGTCCTTTCCAGGGGCGTCTTGTGATCTTCCAGGCCCAGGACCCTaGCAGGTACTGACCCACGACCCTTCTCCCCCTCGGCCTTGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: PSFPGASCDLPGPGP*QVLTHDPSPPRPCY Trigger: GTAGCAAGGCCGAGGGGGAGAAGGGTCGTGGGTCAGTACCTGCCAGGGTCCTGGGCCTGGAAGATCACAAGACGCCCCTGGAAAGGACGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS GCA 90 bp | CCACTGTCAGGAGTGGGCAGTGGTGGTTTAGGGGGTGGGCGCAGCTaGAGGAGCTCCTGCTGCTCATGTGACACAAAGTGGCCATGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PLSGVGSGGLGGGRS*RSSCCSCDTKWPWA Trigger: GGCCCATGGCCACTTTGTGTCACATGAGCAGCAGGAGCTCCTGCAGCTGCGCCCACCCCCTAAACCACCACTGCCCACTCCTGACAGTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CAA 90 bp | ACAGCAGGTCCAAGCCAAGTCCTCACTTTGGAGCCAGGAGGCCAGCACAGACCTCGACACACCAGCTGCTaGGCCAGGGGCAGCTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TAGPSQVLTLEPGGQHRPRHTSC*ARGSSG Trigger: ACCAGAGCTGCCCCTGGCCAAGCAGCTGGTGTGTCG...AGGTCTGTGCTGGCCTCCTGGCTCCAAAGTGAGGACTTGGCTTGGACCTGCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS TCA 90 bp | AGACAGGGAGCTGCTGCCATTGGGAGAGTCCAGTCCAGAGGGTGGTaGCAAGCTGAGGTCCACCAAGGGGGCTGCAGAAAAGCGTCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: RQGAAAIGRVQSRGW*QAEVHQGGCRKASV Trigger: GACGGACGCTTTTCTGCAGCCCCCTTGGTGGACCTCAGCTTGTCACCACCCTCTGGACTGGACTCTCCCAATGGCAGCAGCTCCCTGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014447.13 ENSMUST00000141682.2 |
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| CDS GCA 90 bp | GGCAGTGGTGGTTTAGGGGGTGGGCGCAGCTGCAGGAGCTCCTGCTaGTCATGTGACACAAAGTGGCCATGGGCCTTGATGTGTTTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GSGGLGGGRSCRSSC*SCDTKWPWALMCLR Trigger: GCGCAAACACATCAAGGCCCATGGCCACTTTGTGTCACATGAGCAGCAGGAGCTCCTGCAGCTGCGCCCACCCCCTAAACCACCACTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CAA 90 bp | GAGGCCTTAGCACCCAAGAGAATGGCTCTTCTTGGACAGCAGGTCCAAGCCAAGTTCTCCCCCTCGGCCTaGCTACCGGCAGAGCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: EALAPKRMALLGQQVQAKFSPSA*LPAEPP Trigger: GGGTGGCTCTGCCGGTAGCAAGGCCGAGGGGGAGAA...CTTGGCTTGGACCTGCTGTCCAAGAAGAGCCATTCTCTTGGGTGCTAAGGCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS TCA 90 bp | AGCTGCTGCCATTGGGAGAGTCCAGTCCAGAGGGTGGTGACAAGCTaGGGTCCACCAAGGGGGCTGCAGAAAAGCGTCCGTCCACCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SCCHWESPVQRVVTS*GPPRGLQKSVRPPS Trigger: AGAAGGTGGACGGACGCTTTTCTGCAGCCCCCTTGGTGGACCTCAGCTTGTCACCACCCTCTGGACTGGACTCTCCCAATGGCAGCAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014447.13 ENSMUST00000141682.2 |
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| CDS GCA 90 bp | GTGGGCAGTGGTGGTTTAGGGGGTGGGCGCAGCTGCAGGAGCTCCTaGTGCTCATGTGACACAAAGTGGCCATGGGCCTTGATGTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VGSGGLGGGRSCRSS*CSCDTKWPWALMCL Trigger: CAAACACATCAAGGCCCATGGCCACTTTGTGTCACATGAGCAGCAGGAGCTCCTGCAGCTGCGCCCACCCCCTAAACCACCACTGCCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS GCA 90 bp | CCACCCAGCCAGGAGTTAACACCTCTGGACTGCTGGCTGCTGAGTTaGCTGTGGACAGGTCCAGTACAGTGCCTGGGAGCAAAGGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PPSQELTPLDCWLLS*LWTGPVQCLGAKGV Trigger: GACTCCCTTTGCTCCCAGGCACTGTACTGGACCTGTCCACAGGCAACTCAGCAGCCAGCAGTCCAGAGGTGTTAACTCCTGGCTGGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CAA 90 bp | GAGGCCTTAGCACCCAAGAGAATGGCTCTTCTTGGACAGCAGGTCCAAGCCAAGCCCCCACCTCCACCATaGCCACAGGCCAGAGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: EALAPKRMALLGQQVQAKPPPPP*PQARAL Trigger: CAGTGCTCTGGCCTGTGGCAATGGTGGAGGTGGGGG...CTTGGCTTGGACCTGCTGTCCAAGAAGAGCCATTCTCTTGGGTGCTAAGGCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS CCA 90 bp | TGGAAATCCACAGCAGTAGGCAGTGGAGGCAAGTCCCCATTGCCCTaGCACTCAGGAGACAGGGAGCTGCTGCCATTGGGAGAGTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: WKSTAVGSGGKSPLP*HSGDRELLPLGESS Trigger: ACTGGACTCTCCCAATGGCAGCAGCTCCCTGTCTCCTGAGTGCCAGGGCAATGGGGACTTGCCTCCACTGCCTACTGCTGTGGATTTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CAA 90 bp | GGAGACCAGCTCCTTAACTTGCTCACAGCCCCATCAAGGAGAGCCAGCACAGCCATCTTGTACCTGGCATaGAAGCCACGGCCATGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GDQLLNLLTAPSRRASTAILYLA*KPRPWR Trigger: CCGCCATGGCCGTGGCTTCAATGCCAGGTACAAGAT...GGCTGTGCTGGCTCTCCTTGATGGGGCTGTGAGCAAGTTAAGGAGCTGGTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CAA 90 bp | CCAGCCAGGGTGGCCATAGAGAGGAACGCACCAGAGCAAGAGGCAGGACTGAGCAAGTGGCCATGGGCCTaGATGTGTTTGCGCAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PARVAIERNAPEQEAGLSKWPWA*MCLRSE Trigger: TTCACTGCGCAAACACATCAAGGCCCATGGCCACTT...GCTCAGTCCTGCCTCTTGCTCTGGTGCGTTCCTCTCTATGGCCACCCTGGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CAA 90 bp | CACAGACCTTCTAGCACCATCCTTGCCACCTTGCCACCCAGCTTGTCTGGGGCTGGGTTCTTGGCCAGATaGAGGGGCAGAACAGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: HRPSSTILATLPPSLSGAGFLAR*RGRTEP Trigger: AGGCTCTGTTCTGCCCCTCAATCTGGCCAAGAACCC...AGCCCCAGACAAGCTGGGTGGCAAGGTGGCAAGGATGGTGCTAGAAGGTCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS CCA 90 bp | AGCCAGGAGTTAACACCTCTGGACTGCTGGCTGCTGAGTTGCCTGTaGACAGGTCCAGTACAGTGCCTGGGAGCAAAGGGAGTCCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: SQELTPLDCWLLSCL*TGPVQCLGAKGVHQ Trigger: CTGATGGACTCCCTTTGCTCCCAGGCACTGTACTGGACCTGTCCACAGGCAACTCAGCAGCCAGCAGTCCAGAGGTGTTAACTCCTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CAA 90 bp | GGACTGGAACCCTGCCCAGCCAGGGTGGCCATAGAGAGGAACGCACCAGAGCAAACCTTCTCAGGGAATTaGGGGTTCAGCAGGAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: GLEPCPARVAIERNAPEQTFSGN*GFSRKP Trigger: AGGTTTCCTGCTGAACCCCAAATTCCCTGAGAAGGT...TTGCTCTGGTGCGTTCCTCTCTATGGCCACCCTGGCTGGGCAGGGTTCCAGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS CCA 90 bp | GCAGAGCCCCACCAGAACCCAGGGGCAAGAAGAACTGGAAGGAACTaGGGACACCATCCAAATAGCGAAGTGGCTGGAAATCCACAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AEPHQNPGARRTGRN*GHHPNSEVAGNPQQ Trigger: CTGCTGTGGATTTCCAGCCACTTCGCTATTTGGATGGTGTCCCCAGTTCCTTCCAGTTCTTCTTGCCCCTGGGTTCTGGTGGGGCTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CAA 90 bp | GGAGACCAGCTCCTTAACTTGCTCACAGCCCCATCAAGGAGAGCCAGCACAGCCTTTACCACAGCTGGTTaGAGCAGCACAGACCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GDQLLNLLTAPSRRASTAFTTAG*SSTDPG Trigger: ACCAGGGTCTGTGCTGCTCAAACCAGCTGTGGTAAA...GGCTGTGCTGGCTCTCCTTGATGGGGCTGTGAGCAAGTTAAGGAGCTGGTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CAA 90 bp | CTTTGGAAAGTATTGCCAACCCTCTGGCAGGAAAGAGAAGTGCTGGCAGAGCAGAGGGAGCTGCTGCCATaGGGAGAGTCCAGTCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LWKVLPTLWQEREVLAEQRELLP*GESSPE Trigger: CTCTGGACTGGACTCTCCCAATGGCAGCAGCTCCCT...CTGCTCTGCCAGCACTTCTCTTTCCTGCCAGAGGGTTGGCAATACTTTCCAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CAA 90 bp | CTTTGGAAAGTATTGCCAACCCTCTGGCAGGAAAGAGAAGTGCTGGCAGAGCAGAGGCGGGAGAAGCTCTaGTTACAGGTGGGGCATCGG | + |
|
Preference number: 5 (lower is better) Translates to: LWKVLPTLWQEREVLAEQRREKL*LQVGHR Trigger: CCGATGCCCCACCTGTAACAAGAGCTTCTCCCGCCT...CTGCTCTGCCAGCACTTCTCTTTCCTGCCAGAGGGTTGGCAATACTTTCCAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CAA 90 bp | TTTGGAAAGTATTGCCAACCCTCTGGCAGGAAAGAGAAGTGCTGGCAGAGCAGGTGGGTACGGGTGTGCTaGAAGCGGTCACTGGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FGKYCQPSGRKEKCWQSRWVRVC*KRSLEL Trigger: CAACTCCAGTGACCGCTTCAAGCACACCCGTACCCA...CCTGCTCTGCCAGCACTTCTCTTTCCTGCCAGAGGGTTGGCAATACTTTCCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CAA 90 bp | GACTTAAGGCCTAGGACCCTAATAGAGCCAGGAGTTGCTTGGATCCTAGGCAGATGGGCCTTGATGTGTTaGCGCAGTGAACTGGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DLRPRTLIEPGVAWILGRWALMC*RSELGS Trigger: GGACCCCAGTTCACTGCGCAAACACATCAAGGCCCA...TCTGCCTAGGATCCAAGCAACTCCTGGCTCTATTAGGGTCCTAGGCCTTAAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CAA 90 bp | CTATCACTTGAGTCACATGCTGAGCTAATGTCCAGTGCTCTGTTCTTCTCCTTGGGAGGCAAGTCCCCATaGCCCTGGCACTCAGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LSLESHAELMSSALFFSLGGKSP*PWHSGD Trigger: GTCTCCTGAGTGCCAGGGCAATGGGGACTTGCCTCC...CAAGGAGAAGAACAGAGCACTGGACATTAGCTCAGCATGTGACTCAAGTGATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS CCA 90 bp | CAAGAAGAACTGGAAGGAACTGGGGACACCATCCAAATAGCGAAGTaGCTGGAAATCCACAGCAGTAGGCAGTGGAGGCAAGTCCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: QEELEGTGDTIQIAK*LEIHSSRQWRQVPI Trigger: AATGGGGACTTGCCTCCACTGCCTACTGCTGTGGATTTCCAGCCACTTCGCTATTTGGATGGTGTCCCCAGTTCCTTCCAGTTCTTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS-3UTR CAA 90 bp | CTATCACTTGAGTCACATGCTGAGCTAATGTCCAGTGCTCTGTTCTTCTCCTTGGGCAACAGCGGGTTCTaGGCCAGATTGAGGGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSLESHAELMSSALFFSLGNSGF*ARLRGR Trigger: TCTGCCCCTCAATCTGGCCAAGAACCCGCTGTTGCC...CAAGGAGAAGAACAGAGCACTGGACATTAGCTCAGCATGTGACTCAAGTGATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS CCA 72 bp | CCAGGGGCGTCTTGTGATCTTCCAGGCCCAGGACCCTaGCAGGTACTGACCCACGACCCTTCTCCCCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: PGASCDLPGPGP*QVLTHDPSPPR Trigger: CCGAGGGGGAGAAGGGTCGTGGGTCAGTACCTGCCAGGGTCCTGGGCCTGGAAGATCACAAGACGCCCCTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS TCA 72 bp | GAGCGGCTGCGCTCCGTCCTTTCCAGGGGCGTCTTGTaGTCTTCCAGGCCCAGGACCCTGGCAGGTACTGAC | + |
|
Preference number: 6 (lower is better) Translates to: ERLRSVLSRGVL*SSRPRTLAGTD Trigger: GTCAGTACCTGCCAGGGTCCTGGGCCTGGAAGATCACAAGACGCCCCTGGAAAGGACGGAGCGCAGCCGCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS CAA 90 bp | AGGCCTAGTCCACCAGCCCCAAAGGGTGAGGGCAACAGCGGGTTCTaGGCCAGATTGAGGGGCAGAACAGAGCCTGGCAGCCCAGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RPSPPAPKGEGNSGF*ARLRGRTEPGSPGP Trigger: TGGCCCTGGGCTGCCAGGCTCTGTTCTGCCCCTCAATCTGGCCAAGAACCCGCTGTTGCCCTCACCCTTTGGGGCTGGTGGACTAGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS CAA 90 bp | ACAGGTCCAGTACAGTGCCTGGGAGCAAAGGGAGTCCATCAGGGCTaGGCCGGGAGCGGCTGCGCTCCGTCCTTTCCAGGGGCGTCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: TGPVQCLGAKGVHQG*AGSGCAPSFPGASC Trigger: ACAAGACGCCCCTGGAAAGGACGGAGCGCAGCCGCTCCCGGCCAAGCCCTGATGGACTCCCTTTGCTCCCAGGCACTGTACTGGACCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS TCA 72 bp | CTTGTGATCTTCCAGGCCCAGGACCCTGGCAGGTACTaGCCCACGACCCTTCTCCCCCTCGGCCTTGCTACC | + |
|
Preference number: 6 (lower is better) Translates to: LVIFQAQDPGRY*PTTLLPLGLAT Trigger: GGTAGCAAGGCCGAGGGGGAGAAGGGTCGTGGGTCAGTACCTGCCAGGGTCCTGGGCCTGGAAGATCACAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS GCA 72 bp | GCAAAGGGAGTCCATCAGGGCTTGGCCGGGAGCGGCTaGGCTCCGTCCTTTCCAGGGGCGTCTTGTGATCTT | + |
|
Preference number: 6 (lower is better) Translates to: AKGVHQGLAGSG*APSFPGASCDL Trigger: AAGATCACAAGACGCCCCTGGAAAGGACGGAGCGCAGCCGCTCCCGGCCAAGCCCTGATGGACTCCCTTTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS CCA 72 bp | GCTGACATAGGAGCCACTGTCAGGAGTGGGCAGTGGTaGTTTAGGGGGTGGGCGCAGCTGCAGGAGCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ADIGATVRSGQW*FRGWAQLQELL Trigger: CAGGAGCTCCTGCAGCTGCGCCCACCCCCTAAACCACCACTGCCCACTCCTGACAGTGGCTCCTATGTCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS CAA 72 bp | CCACCAGCCCCAAAGGGTGAGGGCAACAGCGGGTTCTaGGCCAGATTGAGGGGCAGAACAGAGCCTGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PPAPKGEGNSGF*ARLRGRTEPGS Trigger: GCTGCCAGGCTCTGTTCTGCCCCTCAATCTGGCCAAGAACCCGCTGTTGCCCTCACCCTTTGGGGCTGGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS GCA 72 bp | AGTCCCCATTGCCCTGGCACTCAGGAGACAGGGAGCTaGTGCCATTGGGAGAGTCCAGTCCAGAGGGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SPHCPGTQETGS*CHWESPVQRVV Trigger: CACCACCCTCTGGACTGGACTCTCCCAATGGCAGCAGCTCCCTGTCTCCTGAGTGCCAGGGCAATGGGGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014447.13 ENSMUST00000141682.2 |
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| CDS GCA 72 bp | TGGCTGCTGAGTTGCCTGTGGACAGGTCCAGTACAGTaGCTGGGAGCAAAGGGAGTCCATCAGGGCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: WLLSCLWTGPVQ*LGAKGVHQGLA Trigger: GGCCAAGCCCTGATGGACTCCCTTTGCTCCCAGGCACTGTACTGGACCTGTCCACAGGCAACTCAGCAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
||
| CDS CCA 72 bp | GCTGGTTACACTTGGCCCATCGACACACCAGCTGCTTaGCCAGGGGCAGCTCTGGTGAGAGGCACTTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: AGYTWPIDTPAA*PGAALVRGTCP Trigger: AGGACAAGTGCCTCTCACCAGAGCTGCCCCTGGCCAAGCAGCTGGTGTGTCGATGGGCCAAGTGTAACCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
||
| CDS CAA 90 bp | AGTGGCTGGAAATCCACAGCAGTAGGCAGTGGAGGCAAGTCCCCATaGCCCTGGCACTCAGGAGACAGGGAGCTGCTGCCATTGGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SGWKSTAVGSGGKSP*PWHSGDRELLPLGE Trigger: CTCTCCCAATGGCAGCAGCTCCCTGTCTCCTGAGTGCCAGGGCAATGGGGACTTGCCTCCACTGCCTACTGCTGTGGATTTCCAGCCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
||
| CDS TCA 72 bp | CATTGGGAGAGTCCAGTCCAGAGGGTGGTGACAAGCTaGGGTCCACCAAGGGGGCTGCAGAAAAGCGTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: HWESPVQRVVTS*GPPRGLQKSVR Trigger: ACGGACGCTTTTCTGCAGCCCCCTTGGTGGACCTCAGCTTGTCACCACCCTCTGGACTGGACTCTCCCAATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014447.13 ENSMUST00000141682.2 |
||
| CDS TCA 72 bp | GCTGCTGCCATTGGGAGAGTCCAGTCCAGAGGGTGGTaGCAAGCTGAGGTCCACCAAGGGGGCTGCAGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: AAAIGRVQSRGW*QAEVHQGGCRK Trigger: TTTTCTGCAGCCCCCTTGGTGGACCTCAGCTTGTCACCACCCTCTGGACTGGACTCTCCCAATGGCAGCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014447.13 ENSMUST00000141682.2 |
||
| CDS TCA 72 bp | TTGAAGCCACGGCCATGGCGGGCGCAGCCCTCCCAATaGCAGCAGTATCGAGCATCCTGTTCAGGCTTGACA | + |
|
Preference number: 6 (lower is better) Translates to: LKPRPWRAQPSQ*QQYRASCSGLT Trigger: TGTCAAGCCTGAACAGGATGCTCGATACTGCTGTCATTGGGAGGGCTGCGCCCGCCATGGCCGTGGCTTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS GCA 72 bp | AAGAGCTGGTTACACTTGGCCCATCGACACACCAGCTaGTTGGCCAGGGGCAGCTCTGGTGAGAGGCACTTG | + |
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Preference number: 6 (lower is better) Translates to: KSWLHLAHRHTS*LARGSSGERHL Trigger: CAAGTGCCTCTCACCAGAGCTGCCCCTGGCCAAGCAGCTGGTGTGTCGATGGGCCAAGTGTAACCAGCTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS TCA 72 bp | TCCTTTCTCTCTTCTCTCTTGCCGCTCGGAGCTTGGTaGTGCTCAGCTTTAGGTCGAGGGGCTCGTCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: SFLSSLLPLGAW*CSALGRGARPR Trigger: CCTTGGACGAGCCCCTCGACCTAAAGCTGAGCATCACCAAGCTCCGAGCGGCAAGAGAGAAGAGAGAAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014447.13 ENSMUST00000141682.2 |
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| CDS TCA 72 bp | CTATCGTCCACCAGGCCCAGCTCTCGATGCAAAGCATaGTGCCGGACCACACCCAGTGTCCTTTCTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LSSTRPSSRCKA*CRTTPSVLSLF Trigger: GAAGAGAGAAAGGACACTGGGTGTGGTCCGGCATCATGCTTTGCATCGAGAGCTGGGCCTGGTGGACGATAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014447.13 ENSMUST00000141682.2 |
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| CDS CCA 72 bp | CTGCAGAAAAGCGTCCGTCCACCTTCTCAGGGAATTTaGGGTTCAGCAGGAAACCTGGTGGTGGAGAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LQKSVRPPSQGI*GSAGNLVVESL Trigger: CAGGCTCTCCACCACCAGGTTTCCTGCTGAACCCCAAATTCCCTGAGAAGGTGGACGGACGCTTTTCTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014447.13 ENSMUST00000141682.2 |
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| CDS CCA 72 bp | ATAGCGAAGTGGCTGGAAATCCACAGCAGTAGGCAGTaGAGGCAAGTCCCCATTGCCCTGGCACTCAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: IAKWLEIHSSRQ*RQVPIALALRR Trigger: TCTCCTGAGTGCCAGGGCAATGGGGACTTGCCTCCACTGCCTACTGCTGTGGATTTCCAGCCACTTCGCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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| CDS CAA 72 bp | GCTGCAGAAAAGCGTCCGTCCACCTTCTCAGGGAATTaGGGGTTCAGCAGGAAACCTGGTGGTGGAGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: AAEKRPSTFSGN*GFSRKPGGGEP Trigger: AGGCTCTCCACCACCAGGTTTCCTGCTGAACCCCAAATTCCCTGAGAAGGTGGACGGACGCTTTTCTGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014447.13 ENSMUST00000141682.2 |
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| CDS TCA 72 bp | CATCGGTGCGGCTTCTCGTTGGTGTGTGTCCGGATGTaGATGAGCATCTTGTACCTGGCATTGAAGCCACGG | + |
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Preference number: 6 (lower is better) Translates to: HRCGFSLVCVRM*MSILYLALKPR Trigger: CCGTGGCTTCAATGCCAGGTACAAGATGCTCATTCACATCCGGACACACACCAACGAGAAGCCGCACCGATG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014447.13 |
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