Pregenerated sensors for GLIPR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028480Ensembl transcript IDs: ENSMUST00000030202.14, ENSMUST00000107855.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCACACTTGGGAGGCACAGGCAGGTGCATCTCTGCCAGCCTGGTCTaGAGAGCAAATTCTAGGACAGCCAAGGCTACACCGAGAAACCCT | + |
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Preference number: 1 (lower is better) Translates to: PHLGGTGRCISASLV*RANSRTAKATPRNP Trigger: AGGGTTTCTCGGTGTAGCCTTGGCTGTCCTAGAATTTGCTCTGCAGACCAGGCTGGCAGAGATGCACCTGCCTGTGCCTCCCAAGTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR GCA 90 bp | GACAGAGGCTTTGGGGCTTCCTCCAGGGAAGCTCACCCTCACCTCTaGTCTATTGACTTCATCATAGTCCAAGGCCTTGGCCAAGAGCCC | + |
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Preference number: 1 (lower is better) Translates to: DRGFGASSREAHPHL*SIDFIIVQGLGQEP Trigger: GGGCTCTTGGCCAAGGCCTTGGACTATGATGAAGTCAATAGAGCAGAGGTGAGGGTGAGCTTCCCTGGAGGAAGCCCCAAAGCCTCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR GCA 90 bp | CCAGCCAGCCTTGCTGTCATTAGGCCAACAACCCTTTTATCTCCTTaGAGGAGGGGATACCACCATTTCAGGGATCCACAATTGAACCTC | + |
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Preference number: 1 (lower is better) Translates to: PASLAVIRPTTLLSP*RRGYHHFRDPQLNL Trigger: GAGGTTCAATTGTGGATCCCTGAAATGGTGGTATCCCCTCCTGCAAGGAGATAAAAGGGTTGTTGGCCTAATGACAGCAAGGCTGGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR CCA 90 bp | CTCGTTTGTTTGTTGCTATCCCTGGATGAACCAAGTGGCGCAGTGTaGGACTGTTCACAGTGTAACAAAGACCAGCCAGCCTTGCTGTCA | + |
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Preference number: 1 (lower is better) Translates to: LVCLLLSLDEPSGAV*DCSQCNKDQPALLS Trigger: TGACAGCAAGGCTGGCTGGTCTTTGTTACACTGTGAACAGTCCCACACTGCGCCACTTGGTTCATCCAGGGATAGCAACAAACAAACGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR GCA 90 bp | AAGGACGTGTCGATCCCTTCAGTATCTACCACAAGAAGATTACAGTaGAGGAAGGGCCTAGGAAAGGACCTCACTTCTGAGAATGGCAAA | + |
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Preference number: 1 (lower is better) Translates to: KDVSIPSVSTTRRLQ*RKGLGKDLTSENGK Trigger: TTTGCCATTCTCAGAAGTGAGGTCCTTTCCTAGGCCCTTCCTGCACTGTAATCTTCTTGTGGTAGATACTGAAGGGATCGACACGTCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR CCA 90 bp | CTTACCCAATTGTGGTTAGCTAGCCCTCTGGACAAATGTTTCAGATaGCCATCCTTCAATCAGAAGGTACTCAGGTGTAGCTGTCACGAG | + |
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Preference number: 1 (lower is better) Translates to: LTQLWLASPLDKCFR*PSFNQKVLRCSCHE Trigger: CTCGTGACAGCTACACCTGAGTACCTTCTGATTGAAGGATGGCCATCTGAAACATTTGTCCAGAGGGCTAGCTAACCACAATTGGGTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR GCA 90 bp | ACTGGTCCTGTGAGATGCAGCTGGCCAAATGTTTTTAACACTAGCTaGTTTATGTCACACCTAAAGGACGTGTCGATCCCTTCAGTATCT | + |
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Preference number: 1 (lower is better) Translates to: TGPVRCSWPNVFNTS*FMSHLKDVSIPSVS Trigger: AGATACTGAAGGGATCGACACGTCCTTTAGGTGTGACATAAAGCAGCTAGTGTTAAAAACATTTGGCCAGCTGCATCTCACAGGACCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR GCA 90 bp | CATGTCTTCCAACTGAGAATGAGAGATCTCACTGGTCCTGTGAGATaGAGCTGGCCAAATGTTTTTAACACTAGCTGCTTTATGTCACAC | + |
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Preference number: 1 (lower is better) Translates to: HVFQLRMRDLTGPVR*SWPNVFNTSCFMSH Trigger: GTGTGACATAAAGCAGCTAGTGTTAAAAACATTTGGCCAGCTGCATCTCACAGGACCAGTGAGATCTCTCATTCTCAGTTGGAAGACATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR GCA 90 bp | ATCTCCATTTGCTCTTTGGCAGTTCTATTAGGGAATCCTGGAGGATaGAGGATGATATCATGTCTTCCAACTGAGAATGAGAGATCTCAC | + |
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Preference number: 1 (lower is better) Translates to: ISICSLAVLLGNPGG*RMISCLPTENERSH Trigger: GTGAGATCTCTCATTCTCAGTTGGAAGACATGATATCATCCTGCATCCTCCAGGATTCCCTAATAGAACTGCCAAAGAGCAAATGGAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR CCA 90 bp | TTCCAACTGAGAATGAGAGATCTCACTGGTCCTGTGAGATGCAGCTaGCCAAATGTTTTTAACACTAGCTGCTTTATGTCACACCTAAAG | + |
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Preference number: 1 (lower is better) Translates to: FQLRMRDLTGPVRCS*PNVFNTSCFMSHLK Trigger: CTTTAGGTGTGACATAAAGCAGCTAGTGTTAAAAACATTTGGCCAGCTGCATCTCACAGGACCAGTGAGATCTCTCATTCTCAGTTGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGCATCTGGGCTTGTCACACATTCCGGGAGGAAGCCAAGGCGCAGCTGTAGCGGAGGCACAGGCAGGTaGATCTCTGCCAGCCTGGTC | + |
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Preference number: 2 (lower is better) Translates to: GASGLVTHSGRKPRRSCSGGTGR*ISASLV Trigger: GACCAGGCTGGCAGAGATGCACCTGCCTGTGCCTCC...GCTACAGCTGCGCCTTGGCTTCCTCCCGGAATGTGTGACAAGCCCAGATGCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGCATCTGGGCTTGTCACACATTCCGGGAGGAAGCCAAGGCGCAGCTGTAGCAGGCAGGTGCATCTCTaGCAGCCTGGTCTGCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: GASGLVTHSGRKPRRSCSRQVHL*QPGLQS Trigger: GCTCTGCAGACCAGGCTGGCAGAGATGCACCTGCCT...GCTACAGCTGCGCCTTGGCTTCCTCCCGGAATGTGTGACAAGCCCAGATGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR-3UTR GCA 90 bp | AGGACAGAGGCTTTGGGGCTTCCTCCAGGGAAGCTCACCCTCACCTCTGCTCTAGGAGGCACAGGCAGGTaGATCTCTGCCAGCCTGGTC | + |
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Preference number: 2 (lower is better) Translates to: RTEALGLPPGKLTLTSALGGTGR*ISASLV Trigger: GACCAGGCTGGCAGAGATGCACCTGCCTGTGCCTCC...TAGAGCAGAGGTGAGGGTGAGCTTCCCTGGAGGAAGCCCCAAAGCCTCTGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR CAA 90 bp | GTTCCTAATCTCCTTGTTTGGGCCTCCTCCCGGGAGCATCTGGGCTaGTCACACATTCCGGGAGGAAGCCAAGGCGCAGCTGTAGCCACA | + |
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Preference number: 2 (lower is better) Translates to: VPNLLVWASSREHLG*SHIPGGSQGAAVAT Trigger: TGTGGCTACAGCTGCGCCTTGGCTTCCTCCCGGAATGTGTGACAAGCCCAGATGCTCCCGGGAGGAGGCCCAAACAAGGAGATTAGGAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTCCTTGTTTGGGCCTCCTCCCGGGAGCATCTGGGCTTGTCACACATTCCGGAGAGCCCAGACAGAGTaGGGGTCACCCGAGATGACT | + |
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Preference number: 2 (lower is better) Translates to: ISLFGPPPGSIWACHTFRRAQTE*GSPEMT Trigger: AGTCATCTCGGGTGACCCTCACTCTGTCTGGGCTCT...CCGGAATGTGTGACAAGCCCAGATGCTCCCGGGAGGAGGCCCAAACAAGGAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGCATCTGGGCTTGTCACACATTCCGGGAGGAAGCCAAGGCGCAGCTGTAGCATCTCACTGGTCCTGTaGGATGCAGCTGGCCAAATG | + |
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Preference number: 2 (lower is better) Translates to: GASGLVTHSGRKPRRSCSISLVL*DAAGQM Trigger: CATTTGGCCAGCTGCATCTCACAGGACCAGTGAGAT...GCTACAGCTGCGCCTTGGCTTCCTCCCGGAATGTGTGACAAGCCCAGATGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR-3UTR GCA 90 bp | GCATCTGGGCTTGTCACACATTCCGGGAGGAAGCCAAGGCGCAGCTGTAGCCACTCTGCCAGCCTGGTCTaGAGAGCAAATTCTAGGACA | + |
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Preference number: 2 (lower is better) Translates to: ASGLVTHSGRKPRRSCSHSASLV*RANSRT Trigger: TGTCCTAGAATTTGCTCTGCAGACCAGGCTGGCAGA...GTGGCTACAGCTGCGCCTTGGCTTCCTCCCGGAATGTGTGACAAGCCCAGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR-3UTR GCA 90 bp | AGGACAGAGGCTTTGGGGCTTCCTCCAGGGAAGCTCACCCTCACCTCTGCTCTATCTGCCAGCCTGGTCTaGAGAGCAAATTCTAGGACA | + |
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Preference number: 2 (lower is better) Translates to: RTEALGLPPGKLTLTSALSASLV*RANSRT Trigger: TGTCCTAGAATTTGCTCTGCAGACCAGGCTGGCAGA...TAGAGCAGAGGTGAGGGTGAGCTTCCCTGGAGGAAGCCCCAAAGCCTCTGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR-3UTR GCA 90 bp | AGGACAGAGGCTTTGGGGCTTCCTCCAGGGAAGCTCACCCTCACCTCTGCTCTAACAGACACTCGCTGGTaGTTTTGTGGTTCTATAGGC | + |
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Preference number: 2 (lower is better) Translates to: RTEALGLPPGKLTLTSALTDTRW*FCGSIG Trigger: GCCTATAGAACCACAAAAGCACCAGCGAGTGTCTGT...TAGAGCAGAGGTGAGGGTGAGCTTCCCTGGAGGAAGCCCCAAAGCCTCTGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR-3UTR CCA 90 bp | GCATCTGGGCTTGTCACACATTCCGGGAGGAAGCCAAGGCGCAGCTGTAGCCACAATCTTACCCAATTGTaGTTAGCTAGCCCTCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: ASGLVTHSGRKPRRSCSHNLTQL*LASPLD Trigger: GTCCAGAGGGCTAGCTAACCACAATTGGGTAAGATT...GTGGCTACAGCTGCGCCTTGGCTTCCTCCCGGAATGTGTGACAAGCCCAGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR-3UTR CCA 90 bp | GCATCTGGGCTTGTCACACATTCCGGGAGGAAGCCAAGGCGCAGCTGTAGCCACTCGCTGGTGCTTTTGTaGTTCTATAGGCACTTCATA | + |
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Preference number: 2 (lower is better) Translates to: ASGLVTHSGRKPRRSCSHSLVLL*FYRHFI Trigger: TATGAAGTGCCTATAGAACCACAAAAGCACCAGCGA...GTGGCTACAGCTGCGCCTTGGCTTCCTCCCGGAATGTGTGACAAGCCCAGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR-3UTR GCA 90 bp | CTCGTTTGTTTGTTGCTATCCCTGGATGAACCAAGTGGCGCAGTGTGGGACTGTACCCTTTTATCTCCTTaGAGGAGGGGATACCACCAT | + |
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Preference number: 2 (lower is better) Translates to: LVCLLLSLDEPSGAVWDCTLLSP*RRGYHH Trigger: ATGGTGGTATCCCCTCCTGCAAGGAGATAAAAGGGT...ACAGTCCCACACTGCGCCACTTGGTTCATCCAGGGATAGCAACAAACAAACGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR-3UTR GCA 90 bp | CTCGTTTGTTTGTTGCTATCCCTGGATGAACCAAGTGGCGCAGTGTGGGACTGTACAAGAAGATTACAGTaGAGGAAGGGCCTAGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: LVCLLLSLDEPSGAVWDCTRRLQ*RKGLGK Trigger: CTTTCCTAGGCCCTTCCTGCACTGTAATCTTCTTGT...ACAGTCCCACACTGCGCCACTTGGTTCATCCAGGGATAGCAACAAACAAACGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTCCTTGTTTGGGCCTCCTCCCGGGAGCATCTGGGCTTGTCACACATTCCGGGTTTTTAACACTAGCTaGTTTATGTCACACCTAAAG | + |
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Preference number: 2 (lower is better) Translates to: ISLFGPPPGSIWACHTFRVFNTS*FMSHLK Trigger: CTTTAGGTGTGACATAAAGCAGCTAGTGTTAAAAAC...CCGGAATGTGTGACAAGCCCAGATGCTCCCGGGAGGAGGCCCAAACAAGGAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR-3UTR GCA 90 bp | CTCGTTTGTTTGTTGCTATCCCTGGATGAACCAAGTGGCGCAGTGTGGGACTGTGCTCACCCTCACCTCTaGTCTATTGACTTCATCATA | + |
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Preference number: 2 (lower is better) Translates to: LVCLLLSLDEPSGAVWDCAHPHL*SIDFII Trigger: TATGATGAAGTCAATAGAGCAGAGGTGAGGGTGAGC...ACAGTCCCACACTGCGCCACTTGGTTCATCCAGGGATAGCAACAAACAAACGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR-3UTR TCA 90 bp | CCACAATTGAACCTCTGGCTTGATCCCTCCCTGGCAGACGTGGTTAAATCAGTTGCCAGAGTAGGGCTGTaGGCAATGAAACTTAAAAAC | + |
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Preference number: 2 (lower is better) Translates to: PQLNLWLDPSLADVVKSVARVGL*AMKLKN Trigger: GTTTTTAAGTTTCATTGCTCACAGCCCTACTCTGGC...AACTGATTTAACCACGTCTGCCAGGGAGGGATCAAGCCAGAGGTTCAATTGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR-3UTR GCA 90 bp | TCTATTGACTTCATCATAGTCCAAGGCCTTGGCCAAGAGCCCAGACAGAGTGAGACAAGAAGATTACAGTaGAGGAAGGGCCTAGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: SIDFIIVQGLGQEPRQSETRRLQ*RKGLGK Trigger: CTTTCCTAGGCCCTTCCTGCACTGTAATCTTCTTGT...CTCACTCTGTCTGGGCTCTTGGCCAAGGCCTTGGACTATGATGAAGTCAATAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR-3UTR GCA 90 bp | CCACAATTGAACCTCTGGCTTGATCCCTCCCTGGCAGACGTGGTTAAATCAGTTGGGAATCCTGGAGGATaGAGGATGATATCATGTCTT | + |
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Preference number: 2 (lower is better) Translates to: PQLNLWLDPSLADVVKSVGNPGG*RMISCL Trigger: AAGACATGATATCATCCTGCATCCTCCAGGATTCCC...AACTGATTTAACCACGTCTGCCAGGGAGGGATCAAGCCAGAGGTTCAATTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR-3UTR GCA 90 bp | TGGACAAATGTTTCAGATGGCCATCCTTCAATCAGAAGGTACTCAGGTGTAGCTACAGACACTCGCTGGTaGTTTTGTGGTTCTATAGGC | + |
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Preference number: 2 (lower is better) Translates to: WTNVSDGHPSIRRYSGVATDTRW*FCGSIG Trigger: GCCTATAGAACCACAAAAGCACCAGCGAGTGTCTGT...AGCTACACCTGAGTACCTTCTGATTGAAGGATGGCCATCTGAAACATTTGTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR-3UTR CCA 90 bp | GTTTCAGATGGCCATCCTTCAATCAGAAGGTACTCAGGTGTAGCTGTCACGAGATCGCTGGTGCTTTTGTaGTTCTATAGGCACTTCATA | + |
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Preference number: 2 (lower is better) Translates to: VSDGHPSIRRYSGVAVTRSLVLL*FYRHFI Trigger: TATGAAGTGCCTATAGAACCACAAAAGCACCAGCGA...TCTCGTGACAGCTACACCTGAGTACCTTCTGATTGAAGGATGGCCATCTGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR-3UTR CCA 90 bp | CCACAATTGAACCTCTGGCTTGATCCCTCCCTGGCAGACGTGGTTAAATCAGTTCTCAAAGCCCAAGGATaGATATTAGAAGGAAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: PQLNLWLDPSLADVVKSVLKAQG*ILEGRK Trigger: CTTTCTTCCTTCTAATATCCATCCTTGGGCTTTGAG...AACTGATTTAACCACGTCTGCCAGGGAGGGATCAAGCCAGAGGTTCAATTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR-3UTR GCA 90 bp | CTCGTTTGTTTGTTGCTATCCCTGGATGAACCAAGTGGCGCAGTGTGGGACTGTAGTGGCTGTGGTATTTaGTCTTTAAAGGTTGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: LVCLLLSLDEPSGAVWDCSGCGI*SLKVEK Trigger: TTTTTCAACCTTTAAAGAGCAAATACCACAGCCACT...ACAGTCCCACACTGCGCCACTTGGTTCATCCAGGGATAGCAACAAACAAACGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR-3UTR CCA 90 bp | ACAAAAAGGAAAGGATTTTATTGTCTCGTTTGTTTGTTGCTATCCCTGGATGAACATAGTCCAAGGCCTTaGCCAAGAGCCCAGACAGAG | + |
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Preference number: 2 (lower is better) Translates to: TKRKGFYCLVCLLLSLDEHSPRP*PRAQTE Trigger: CTCTGTCTGGGCTCTTGGCCAAGGCCTTGGACTATG...TTCATCCAGGGATAGCAACAAACAAACGAGACAATAAAATCCTTTCCTTTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR-3UTR CCA 90 bp | ACAAAAAGGAAAGGATTTTATTGTCTCGTTTGTTTGTTGCTATCCCTGGATGAACCACAATTGAACCTCTaGCTTGATCCCTCCCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: TKRKGFYCLVCLLLSLDEPQLNL*LDPSLA Trigger: TGCCAGGGAGGGATCAAGCCAGAGGTTCAATTGTGG...TTCATCCAGGGATAGCAACAAACAAACGAGACAATAAAATCCTTTCCTTTTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR-3UTR CCA 90 bp | ACAAAAAGGAAAGGATTTTATTGTCTCGTTTGTTTGTTGCTATCCCTGGATGAATCTATTAGGGAATCCTaGAGGATGCAGGATGATATC | + |
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Preference number: 2 (lower is better) Translates to: TKRKGFYCLVCLLLSLDESIRES*RMQDDI Trigger: GATATCATCCTGCATCCTCCAGGATTCCCTAATAGA...TTCATCCAGGGATAGCAACAAACAAACGAGACAATAAAATCCTTTCCTTTTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR-3UTR GCA 90 bp | ACAAAAAGGAAAGGATTTTATTGTCTCGTTTGTTTGTTGCTATCCCTGGATGAAAGTGGCTGTGGTATTTaGTCTTTAAAGGTTGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: TKRKGFYCLVCLLLSLDESGCGI*SLKVEK Trigger: TTTTTCAACCTTTAAAGAGCAAATACCACAGCCACT...TTCATCCAGGGATAGCAACAAACAAACGAGACAATAAAATCCTTTCCTTTTTGT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR-3UTR CAA 90 bp | GCATCTGGGCTTGTCACACATTCCGGGAGGAAGCCAAGGCGCAGCTGTAGCCACCCTTTAATCCCACACTaGGGAGGCACAGGCAGGTGC | + |
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Preference number: 3 (lower is better) Translates to: ASGLVTHSGRKPRRSCSHPLIPH*GGTGRC Trigger: GCACCTGCCTGTGCCTCCCAAGTGTGGGATTAAAGG...GTGGCTACAGCTGCGCCTTGGCTTCCTCCCGGAATGTGTGACAAGCCCAGATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR-3UTR CAA 90 bp | GGAGCATCTGGGCTTGTCACACATTCCGGGAGGAAGCCAAGGCGCAGCTGTAGCTCACCGCCTGCAGAGTaGGGGAAGGACAGAGGCTTT | + |
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Preference number: 3 (lower is better) Translates to: GASGLVTHSGRKPRRSCSSPPAE*GKDRGF Trigger: AAAGCCTCTGTCCTTCCCCAACTCTGCAGGCGGTGA...GCTACAGCTGCGCCTTGGCTTCCTCCCGGAATGTGTGACAAGCCCAGATGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR GCA 72 bp | GGAGGCACAGGCAGGTGCATCTCTGCCAGCCTGGTCTaGAGAGCAAATTCTAGGACAGCCAAGGCTACACCG | + |
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Preference number: 3 (lower is better) Translates to: GGTGRCISASLV*RANSRTAKATP Trigger: CGGTGTAGCCTTGGCTGTCCTAGAATTTGCTCTGCAGACCAGGCTGGCAGAGATGCACCTGCCTGTGCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR CCA 72 bp | CTAATCTCCTTGTTTGGGCCTCCTCCCGGGAGCATCTaGGCTTGTCACACATTCCGGGAGGAAGCCAAGGCG | + |
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Preference number: 3 (lower is better) Translates to: LISLFGPPPGSI*ACHTFREEAKA Trigger: CGCCTTGGCTTCCTCCCGGAATGTGTGACAAGCCCAGATGCTCCCGGGAGGAGGCCCAAACAAGGAGATTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR-3UTR CAA 90 bp | ATCTCCTTGTTTGGGCCTCCTCCCGGGAGCATCTGGGCTTGTCACACATTCCGGTCACCGCCTGCAGAGTaGGGGAAGGACAGAGGCTTT | + |
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Preference number: 3 (lower is better) Translates to: ISLFGPPPGSIWACHTFRSPPAE*GKDRGF Trigger: AAAGCCTCTGTCCTTCCCCAACTCTGCAGGCGGTGA...CCGGAATGTGTGACAAGCCCAGATGCTCCCGGGAGGAGGCCCAAACAAGGAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR TCA 72 bp | GCAGGAGGGGATACCACCATTTCAGGGATCCACAATTaGACCTCTGGCTTGATCCCTCCCTGGCAGACGTGG | + |
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Preference number: 3 (lower is better) Translates to: AGGDTTISGIHN*TSGLIPPWQTW Trigger: CCACGTCTGCCAGGGAGGGATCAAGCCAGAGGTTCAATTGTGGATCCCTGAAATGGTGGTATCCCCTCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR CCA 72 bp | ACTTGGGAGGCACAGGCAGGTGCATCTCTGCCAGCCTaGTCTGCAGAGCAAATTCTAGGACAGCCAAGGCTA | + |
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Preference number: 3 (lower is better) Translates to: TWEAQAGASLPA*SAEQILGQPRL Trigger: TAGCCTTGGCTGTCCTAGAATTTGCTCTGCAGACCAGGCTGGCAGAGATGCACCTGCCTGTGCCTCCCAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR-3UTR CAA 90 bp | AGGACAGAGGCTTTGGGGCTTCCTCCAGGGAAGCTCACCCTCACCTCTGCTCTACACTCGCTGGTGCTTTaGTGGTTCTATAGGCACTTC | + |
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Preference number: 3 (lower is better) Translates to: RTEALGLPPGKLTLTSALHSLVL*WFYRHF Trigger: GAAGTGCCTATAGAACCACAAAAGCACCAGCGAGTG...TAGAGCAGAGGTGAGGGTGAGCTTCCCTGGAGGAAGCCCCAAAGCCTCTGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| 3UTR GCA 72 bp | ATGCCTTTAATCCCACACTTGGGAGGCACAGGCAGGTaGATCTCTGCCAGCCTGGTCTGCAGAGCAAATTCT | + |
|
Preference number: 3 (lower is better) Translates to: MPLIPHLGGTGR*ISASLVCRANS Trigger: AGAATTTGCTCTGCAGACCAGGCTGGCAGAGATGCACCTGCCTGTGCCTCCCAAGTGTGGGATTAAAGGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| 3UTR GCA 72 bp | TTTGGGGCTTCCTCCAGGGAAGCTCACCCTCACCTCTaGTCTATTGACTTCATCATAGTCCAAGGCCTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: FGASSREAHPHL*SIDFIIVQGLG Trigger: GCCAAGGCCTTGGACTATGATGAAGTCAATAGAGCAGAGGTGAGGGTGAGCTTCCCTGGAGGAAGCCCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| 3UTR CCA 72 bp | GGATACCACCATTTCAGGGATCCACAATTGAACCTCTaGCTTGATCCCTCCCTGGCAGACGTGGTTAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: GYHHFRDPQLNL*LDPSLADVVKS Trigger: TGATTTAACCACGTCTGCCAGGGAGGGATCAAGCCAGAGGTTCAATTGTGGATCCCTGAAATGGTGGTATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCGTTTGTTTGTTGCTATCCCTGGATGAACCAAGTGGCGCAGTGTGGGACTGTACTAATCTTACCCAATaGTGGTTAGCTAGCCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LVCLLLSLDEPSGAVWDCTNLTQ*WLASPL Trigger: CAGAGGGCTAGCTAACCACAATTGGGTAAGATTAGT...ACAGTCCCACACTGCGCCACTTGGTTCATCCAGGGATAGCAACAAACAAACGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| 3UTR GCA 72 bp | TCGATCCCTTCAGTATCTACCACAAGAAGATTACAGTaGAGGAAGGGCCTAGGAAAGGACCTCACTTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SIPSVSTTRRLQ*RKGLGKDLTSE Trigger: CTCAGAAGTGAGGTCCTTTCCTAGGCCCTTCCTGCACTGTAATCTTCTTGTGGTAGATACTGAAGGGATCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| 3UTR GCA 72 bp | CTTGCTGTCATTAGGCCAACAACCCTTTTATCTCCTTaGAGGAGGGGATACCACCATTTCAGGGATCCACAA | + |
|
Preference number: 3 (lower is better) Translates to: LAVIRPTTLLSP*RRGYHHFRDPQ Trigger: TTGTGGATCCCTGAAATGGTGGTATCCCCTCCTGCAAGGAGATAAAAGGGTTGTTGGCCTAATGACAGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| 3UTR-3UTR CAA 90 bp | AATCTTACCCAATTGTGGTTAGCTAGCCCTCTGGACAAATGTTTCAGATGGCCACACTCGCTGGTGCTTTaGTGGTTCTATAGGCACTTC | + |
|
Preference number: 3 (lower is better) Translates to: NLTQLWLASPLDKCFRWPHSLVL*WFYRHF Trigger: GAAGTGCCTATAGAACCACAAAAGCACCAGCGAGTG...TGGCCATCTGAAACATTTGTCCAGAGGGCTAGCTAACCACAATTGGGTAAGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCGTTTGTTTGTTGCTATCCCTGGATGAACCAAGTGGCGCAGTGTGGGACTGTGAAACTGTGTATAGTTaGAGGCAAAACACAGGATCA | + |
|
Preference number: 3 (lower is better) Translates to: LVCLLLSLDEPSGAVWDCETVYS*RQNTGS Trigger: TGATCCTGTGTTTTGCCTCAAACTATACACAGTTTC...ACAGTCCCACACTGCGCCACTTGGTTCATCCAGGGATAGCAACAAACAAACGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| 3UTR TCA 72 bp | ACAGTGCAGGAAGGGCCTAGGAAAGGACCTCACTTCTaGGAATGGCAAATATTCAGAATCCTCAAAGCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: TVQEGPRKGPHF*EWQIFRILKAQ Trigger: TTGGGCTTTGAGGATTCTGAATATTTGCCATTCTCAGAAGTGAGGTCCTTTCCTAGGCCCTTCCTGCACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| 3UTR CCA 72 bp | TTGTGGTTAGCTAGCCCTCTGGACAAATGTTTCAGATaGCCATCCTTCAATCAGAAGGTACTCAGGTGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: LWLASPLDKCFR*PSFNQKVLRCS Trigger: GCTACACCTGAGTACCTTCTGATTGAAGGATGGCCATCTGAAACATTTGTCCAGAGGGCTAGCTAACCACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| 3UTR TCA 72 bp | ATTTTATTGTCTCGTTTGTTTGTTGCTATCCCTGGATaGACCAAGTGGCGCAGTGTGGGACTGTTCACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: ILLSRLFVAIPG*TKWRSVGLFTV Trigger: CACTGTGAACAGTCCCACACTGCGCCACTTGGTTCATCCAGGGATAGCAACAAACAAACGAGACAATAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| 3UTR GCA 72 bp | GTGAGATGCAGCTGGCCAAATGTTTTTAACACTAGCTaGTTTATGTCACACCTAAAGGACGTGTCGATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: VRCSWPNVFNTS*FMSHLKDVSIP Trigger: AGGGATCGACACGTCCTTTAGGTGTGACATAAAGCAGCTAGTGTTAAAAACATTTGGCCAGCTGCATCTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| 3UTR CCA 72 bp | AAGGATTTTATTGTCTCGTTTGTTTGTTGCTATCCCTaGATGAACCAAGTGGCGCAGTGTGGGACTGTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: KDFIVSFVCCYP*MNQVAQCGTVH Trigger: GTGAACAGTCCCACACTGCGCCACTTGGTTCATCCAGGGATAGCAACAAACAAACGAGACAATAAAATCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| 3UTR GCA 72 bp | CAACTGAGAATGAGAGATCTCACTGGTCCTGTGAGATaGAGCTGGCCAAATGTTTTTAACACTAGCTGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: QLRMRDLTGPVR*SWPNVFNTSCF Trigger: AAAGCAGCTAGTGTTAAAAACATTTGGCCAGCTGCATCTCACAGGACCAGTGAGATCTCTCATTCTCAGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| 3UTR GCA 72 bp | TGCTCTTTGGCAGTTCTATTAGGGAATCCTGGAGGATaGAGGATGATATCATGTCTTCCAACTGAGAATGAG | + |
|
Preference number: 3 (lower is better) Translates to: CSLAVLLGNPGG*RMISCLPTENE Trigger: CTCATTCTCAGTTGGAAGACATGATATCATCCTGCATCCTCCAGGATTCCCTAATAGAACTGCCAAAGAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| 3UTR CCA 72 bp | AGAATGAGAGATCTCACTGGTCCTGTGAGATGCAGCTaGCCAAATGTTTTTAACACTAGCTGCTTTATGTCA | + |
|
Preference number: 3 (lower is better) Translates to: RMRDLTGPVRCS*PNVFNTSCFMS Trigger: TGACATAAAGCAGCTAGTGTTAAAAACATTTGGCCAGCTGCATCTCACAGGACCAGTGAGATCTCTCATTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| 3UTR TCA 72 bp | AAACAAAAACAAACGAACAAACAAACAACCCACATATaGGGTGTGAGAGGTGCTAGTGGCTGTGGTATTTGC | + |
|
Preference number: 3 (lower is better) Translates to: KQKQTNKQTTHI*GVRGASGCGIC Trigger: GCAAATACCACAGCCACTAGCACCTCTCACACCTCATATGTGGGTTGTTTGTTTGTTCGTTTGTTTTTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAAAAAGGAAAGGATTTTATTGTCTCGTTTGTTTGTTGCTATCCCTGGATGAAAACCCTTTTATCTCCTaGCAGGAGGGGATACCACCA | + |
|
Preference number: 3 (lower is better) Translates to: TKRKGFYCLVCLLLSLDENPFIS*QEGIPP Trigger: TGGTGGTATCCCCTCCTGCAAGGAGATAAAAGGGTT...TTCATCCAGGGATAGCAACAAACAAACGAGACAATAAAATCCTTTCCTTTTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAAAAAGGAAAGGATTTTATTGTCTCGTTTGTTTGTTGCTATCCCTGGATGAAACTAATCTTACCCAATaGTGGTTAGCTAGCCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TKRKGFYCLVCLLLSLDETNLTQ*WLASPL Trigger: CAGAGGGCTAGCTAACCACAATTGGGTAAGATTAGT...TTCATCCAGGGATAGCAACAAACAAACGAGACAATAAAATCCTTTCCTTTTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| 3UTR CAA 72 bp | CTCCTTGTTTGGGCCTCCTCCCGGGAGCATCTGGGCTaGTCACACATTCCGGGAGGAAGCCAAGGCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLVWASSREHLG*SHIPGGSQGAA Trigger: AGCTGCGCCTTGGCTTCCTCCCGGAATGTGTGACAAGCCCAGATGCTCCCGGGAGGAGGCCCAAACAAGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| CDS-3UTR TCA 90 bp | AGGACAGAGGCTTTGGGGCTTCCTCCAGGGAAGCTCACCCTCACCTCTGCTCTAGCCCAGTCCCTGAAGTaGAACCAGGCTGCTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RTEALGLPPGKLTLTSALAQSLK*NQAAGS Trigger: ACTTCCAGCAGCCTGGTTTCACTTCAGGGACTGGGC...TAGAGCAGAGGTGAGGGTGAGCTTCCCTGGAGGAAGCCCCAAAGCCTCTGTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| CDS-3UTR TCA 90 bp | AGGACAGAGGCTTTGGGGCTTCCTCCAGGGAAGCTCACCCTCACCTCTGCTCTAAAAGTGCCCAGTCCCTaGAGTGAAACCAGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RTEALGLPPGKLTLTSALKVPSP*SETRLL Trigger: CAGCAGCCTGGTTTCACTTCAGGGACTGGGCACTTT...TAGAGCAGAGGTGAGGGTGAGCTTCCCTGGAGGAAGCCCCAAAGCCTCTGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| CDS-3UTR CCA 90 bp | ACTTGGGAGGCACAGGCAGGTGCATCTCTGCCAGCCTGGTCTGCAGAGCAAATTGCCCGGTACTCGTTGTaGGCCTTCAGGACCTCGTTA | + |
|
Preference number: 4 (lower is better) Translates to: TWEAQAGASLPAWSAEQIARYSL*AFRTSL Trigger: TAACGAGGTCCTGAAGGCCCACAACGAGTACCGGGC...AATTTGCTCTGCAGACCAGGCTGGCAGAGATGCACCTGCCTGTGCCTCCCAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030202.14 |
||
| CDS-3UTR CCA 90 bp | GTTTCAGATGGCCATCCTTCAATCAGAAGGTACTCAGGTGTAGCTGTCACGAGAGGCGGGACACCGTGCTaGGCCCGGTACTCGTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSDGHPSIRRYSGVAVTRGGTPC*ARYSLW Trigger: CCACAACGAGTACCGGGCCCAGCACGGTGTCCCGCC...TCTCGTGACAGCTACACCTGAGTACCTTCTGATTGAAGGATGGCCATCTGAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030202.14 |
||
| CDS-3UTR GCA 90 bp | GCATCTGGGCTTGTCACACATTCCGGGAGGAAGCCAAGGCGCAGCTGTAGCCACACCATGGCTGTAAAGTaGCCAGTCCCTGAAGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ASGLVTHSGRKPRRSCSHTMAVK*PVPEVK Trigger: TTTCACTTCAGGGACTGGGCACTTTACAGCCATGGT...GTGGCTACAGCTGCGCCTTGGCTTCCTCCCGGAATGTGTGACAAGCCCAGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| CDS-3UTR GCA 90 bp | GGAGCATCTGGGCTTGTCACACATTCCGGGAGGAAGCCAAGGCGCAGCTGTAGCACCATGGCTGTAAAGTaGCCAGTCCCTGAAGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GASGLVTHSGRKPRRSCSTMAVK*PVPEVK Trigger: TTTCACTTCAGGGACTGGGCACTTTACAGCCATGGT...GCTACAGCTGCGCCTTGGCTTCCTCCCGGAATGTGTGACAAGCCCAGATGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| 3UTR CAA 72 bp | TGCAGGAGGGGATACCACCATTTCAGGGATCCACAATaGAACCTCTGGCTTGATCCCTCCCTGGCAGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: CRRGYHHFRDPQ*NLWLDPSLADV Trigger: CACGTCTGCCAGGGAGGGATCAAGCCAGAGGTTCAATTGTGGATCCCTGAAATGGTGGTATCCCCTCCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| CDS-3UTR GCA 90 bp | GGAGCATCTGGGCTTGTCACACATTCCGGGAGGAAGCCAAGGCGCAGCTGTAGCGTTGACAATATTCCCTaGTGGGAAGTATCTAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GASGLVTHSGRKPRRSCSVDNIP*WEVSSH Trigger: GTGGCTAGATACTTCCCAGCAGGGAATATTGTCAAC...GCTACAGCTGCGCCTTGGCTTCCTCCCGGAATGTGTGACAAGCCCAGATGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| CDS-3UTR TCA 90 bp | CTCGTTTGTTTGTTGCTATCCCTGGATGAACCAAGTGGCGCAGTGTGGGACTGTAAAGTGCCCAGTCCCTaGAGTGAAACCAGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LVCLLLSLDEPSGAVWDCKVPSP*SETRLL Trigger: CAGCAGCCTGGTTTCACTTCAGGGACTGGGCACTTT...ACAGTCCCACACTGCGCCACTTGGTTCATCCAGGGATAGCAACAAACAAACGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| CDS-3UTR GCA 90 bp | CCACAATTGAACCTCTGGCTTGATCCCTCCCTGGCAGACGTGGTTAAATCAGTTCCCGTCACTCGCAGATaGCTTCCCCACGCCTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: PQLNLWLDPSLADVVKSVPVTRR*LPHAYL Trigger: AAGATAGGCGTGGGGAAGGCATCTGCGAGTGACGGG...AACTGATTTAACCACGTCTGCCAGGGAGGGATCAAGCCAGAGGTTCAATTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| CDS-3UTR GCA 90 bp | TCTATTGACTTCATCATAGTCCAAGGCCTTGGCCAAGAGCCCAGACAGAGTGAGCCCGTCACTCGCAGATaGCTTCCCCACGCCTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SIDFIIVQGLGQEPRQSEPVTRR*LPHAYL Trigger: AAGATAGGCGTGGGGAAGGCATCTGCGAGTGACGGG...CTCACTCTGTCTGGGCTCTTGGCCAAGGCCTTGGACTATGATGAAGTCAATAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| CDS-3UTR TCA 90 bp | CCACAATTGAACCTCTGGCTTGATCCCTCCCTGGCAGACGTGGTTAAATCAGTTACTCTGGGCTGTGCTTaGGAATTCTCGTGCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PQLNLWLDPSLADVVKSVTLGCA*EFSCWP Trigger: TGGCCAGCACGAGAATTCTCAAGCACAGCCCAGAGT...AACTGATTTAACCACGTCTGCCAGGGAGGGATCAAGCCAGAGGTTCAATTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030202.14 |
||
| CDS-3UTR CCA 90 bp | ATCTCCTTGTTTGGGCCTCCTCCCGGGAGCATCTGGGCTTGTCACACATTCCGGCTACTTCTTTGGAGGTaGGACATTCTCTTCGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ISLFGPPPGSIWACHTFRLLLWR*DILFEE Trigger: TTCTTCGAAGAGAATGTCCCACCTCCAAAGAAGTAG...CCGGAATGTGTGACAAGCCCAGATGCTCCCGGGAGGAGGCCCAAACAAGGAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| 3UTR CAA 72 bp | GCAAAACACAGGATCAAATTAGCGTTCCTAATCTCCTaGTTTGGGCCTCCTCCCGGGAGCATCTGGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AKHRIKLAFLIS*FGPPPGSIWAC Trigger: ACAAGCCCAGATGCTCCCGGGAGGAGGCCCAAACAAGGAGATTAGGAACGCTAATTTGATCCTGTGTTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| CDS-3UTR TCA 90 bp | TGGACAAATGTTTCAGATGGCCATCCTTCAATCAGAAGGTACTCAGGTGTAGCTGCCCAGTCCCTGAAGTaGAACCAGGCTGCTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: WTNVSDGHPSIRRYSGVAAQSLK*NQAAGS Trigger: ACTTCCAGCAGCCTGGTTTCACTTCAGGGACTGGGC...AGCTACACCTGAGTACCTTCTGATTGAAGGATGGCCATCTGAAACATTTGTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| CDS-3UTR CCA 90 bp | GTTTCAGATGGCCATCCTTCAATCAGAAGGTACTCAGGTGTAGCTGTCACGAGAGCCACGACTGGACTCTaGGCTGTGCTTGAGAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSDGHPSIRRYSGVAVTRATTGL*AVLENS Trigger: AGAATTCTCAAGCACAGCCCAGAGTCCAGTCGTGGC...TCTCGTGACAGCTACACCTGAGTACCTTCTGATTGAAGGATGGCCATCTGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030202.14 |
||
| CDS-3UTR CCA 90 bp | CCACAATTGAACCTCTGGCTTGATCCCTCCCTGGCAGACGTGGTTAAATCAGTTCCACGCCTATCTTCTTaGTATTCTTCCATACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: PQLNLWLDPSLADVVKSVPRLSS*YSSIPW Trigger: CCATGGTATGGAAGAATACCAAGAAGATAGGCGTGG...AACTGATTTAACCACGTCTGCCAGGGAGGGATCAAGCCAGAGGTTCAATTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| CDS-3UTR CCA 90 bp | GTTTCAGATGGCCATCCTTCAATCAGAAGGTACTCAGGTGTAGCTGTCACGAGACCACGCCTATCTTCTTaGTATTCTTCCATACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: VSDGHPSIRRYSGVAVTRPRLSS*YSSIPW Trigger: CCATGGTATGGAAGAATACCAAGAAGATAGGCGTGG...TCTCGTGACAGCTACACCTGAGTACCTTCTGATTGAAGGATGGCCATCTGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| CDS-3UTR CCA 90 bp | TCTATTGACTTCATCATAGTCCAAGGCCTTGGCCAAGAGCCCAGACAGAGTGAGCTACTTCTTTGGAGGTaGGACATTCTCTTCGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SIDFIIVQGLGQEPRQSELLLWR*DILFEE Trigger: TTCTTCGAAGAGAATGTCCCACCTCCAAAGAAGTAG...CTCACTCTGTCTGGGCTCTTGGCCAAGGCCTTGGACTATGATGAAGTCAATAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| CDS-3UTR CCA 90 bp | TGGACAAATGTTTCAGATGGCCATCCTTCAATCAGAAGGTACTCAGGTGTAGCTGACAATATTCCCTGCTaGGAAGTATCTAGCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: WTNVSDGHPSIRRYSGVADNIPC*EVSSHH Trigger: GTGGTGGCTAGATACTTCCCAGCAGGGAATATTGTC...AGCTACACCTGAGTACCTTCTGATTGAAGGATGGCCATCTGAAACATTTGTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| 3UTR CAA 72 bp | ACAAAAAGGAAAGGATTTTATTGTCTCGTTTGTTTGTaGCTATCCCTGGATGAACCAAGTGGCGCAGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TKRKGFYCLVCL*LSLDEPSGAVW Trigger: CCACACTGCGCCACTTGGTTCATCCAGGGATAGCAACAAACAAACGAGACAATAAAATCCTTTCCTTTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
||
| CDS CCA 90 bp | GGACGCCCACGCAAGGTTCTCTCCACACTGGCCACGACTGGACTCTaGGCTGTGCTTGAGAATTCTCGTGCTGGCCAGGGCCTCCGAATA | + |
|
Preference number: 5 (lower is better) Translates to: GRPRKVLSTLATTGL*AVLENSRAGQGLRI Trigger: TATTCGGAGGCCCTGGCCAGCACGAGAATTCTCAAGCACAGCCCAGAGTCCAGTCGTGGCCAGTGTGGAGAGAACCTTGCGTGGGCGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030202.14 |
||
| CDS GCA 90 bp | CACGCAAGGTTCTCTCCACACTGGCCACGACTGGACTCTGGGCTGTaGTTGAGAATTCTCGTGCTGGCCAGGGCCTCCGAATACTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HARFSPHWPRLDSGL*LRILVLARASEYCW Trigger: CCAGCAGTATTCGGAGGCCCTGGCCAGCACGAGAATTCTCAAGCACAGCCCAGAGTCCAGTCGTGGCCAGTGTGGAGAGAACCTTGCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030202.14 |
||
| CDS-3UTR CAA 90 bp | GCATCTGGGCTTGTCACACATTCCGGGAGGAAGCCAAGGCGCAGCTGTAGCCACGACTCTGGGCTGTGCTaGAGAATTCTCGTGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ASGLVTHSGRKPRRSCSHDSGLC*RILVLA Trigger: GGCCAGCACGAGAATTCTCAAGCACAGCCCAGAGTC...GTGGCTACAGCTGCGCCTTGGCTTCCTCCCGGAATGTGTGACAAGCCCAGATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030202.14 |
||
| CDS TCA 90 bp | CAAGGTTCTCTCCACACTGGCCACGACTGGACTCTGGGCTGTGCTTaGGAATTCTCGTGCTGGCCAGGGCCTCCGAATACTGCTGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QGSLHTGHDWTLGCA*EFSCWPGPPNTAGL Trigger: AAGCCCAGCAGTATTCGGAGGCCCTGGCCAGCACGAGAATTCTCAAGCACAGCCCAGAGTCCAGTCGTGGCCAGTGTGGAGAGAACCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030202.14 |
||
| CDS GCA 90 bp | GCTTCCCGGTTGAGCTTCTTACAAAGCTTCAGGGGCGGGACACCGTaGTGGGCCCGGTACTCGTTGTGGGCCTTCAGGACCTCGTTATTA | + |
|
Preference number: 5 (lower is better) Translates to: ASRLSFLQSFRGGTP*WARYSLWAFRTSLL Trigger: TAATAACGAGGTCCTGAAGGCCCACAACGAGTACCGGGCCCAGCACGGTGTCCCGCCCCTGAAGCTTTGTAAGAAGCTCAACCGGGAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030202.14 |
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| CDS CCA 90 bp | TCCCGGTTGAGCTTCTTACAAAGCTTCAGGGGCGGGACACCGTGCTaGGCCCGGTACTCGTTGTGGGCCTTCAGGACCTCGTTATTAAAC | + |
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Preference number: 5 (lower is better) Translates to: SRLSFLQSFRGGTPC*ARYSLWAFRTSLLN Trigger: GTTTAATAACGAGGTCCTGAAGGCCCACAACGAGTACCGGGCCCAGCACGGTGTCCCGCCCCTGAAGCTTTGTAAGAAGCTCAACCGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030202.14 |
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| CDS-3UTR CAA 90 bp | CCACAATTGAACCTCTGGCTTGATCCCTCCCTGGCAGACGTGGTTAAATCAGTTTGGGCCCGGTACTCGTaGTGGGCCTTCAGGACCTCG | + |
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Preference number: 5 (lower is better) Translates to: PQLNLWLDPSLADVVKSVWARYS*WAFRTS Trigger: CGAGGTCCTGAAGGCCCACAACGAGTACCGGGCCCA...AACTGATTTAACCACGTCTGCCAGGGAGGGATCAAGCCAGAGGTTCAATTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030202.14 |
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| CDS-3UTR CAA 90 bp | TCCCACACTTGGGAGGCACAGGCAGGTGCATCTCTGCCAGCCTGGTCTGCAGAGCCCACGCCTATCTTCTaGGTATTCTTCCATACCATG | + |
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Preference number: 5 (lower is better) Translates to: SHTWEAQAGASLPAWSAEPTPIF*VFFHTM Trigger: CATGGTATGGAAGAATACCAAGAAGATAGGCGTGGG...CTCTGCAGACCAGGCTGGCAGAGATGCACCTGCCTGTGCCTCCCAAGTGTGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| CDS CCA 90 bp | CAAAGCTTCAGGGGCGGGACACCGTGCTGGGCCCGGTACTCGTTGTaGGCCTTCAGGACCTCGTTATTAAACTGTTTGGAAGCTGATTTG | + |
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Preference number: 5 (lower is better) Translates to: QSFRGGTPCWARYSL*AFRTSLLNCLEADL Trigger: CAAATCAGCTTCCAAACAGTTTAATAACGAGGTCCTGAAGGCCCACAACGAGTACCGGGCCCAGCACGGTGTCCCGCCCCTGAAGCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030202.14 |
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| CDS GCA 90 bp | TGGGAAGTATCTAGCCACCACAAAGGAGGACCCGTCACTCGCAGATaGCTTCCCCACGCCTATCTTCTTGGTATTCTTCCATACCATGGC | + |
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Preference number: 5 (lower is better) Translates to: WEVSSHHKGGPVTRR*LPHAYLLGILPYHG Trigger: GCCATGGTATGGAAGAATACCAAGAAGATAGGCGTGGGGAAGGCATCTGCGAGTGACGGGTCCTCCTTTGTGGTGGCTAGATACTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| CDS GCA 90 bp | AGGTGGGACATTCTCTTCGAAGAAGCCCTGGTTGACAATATTCCCTaGTGGGAAGTATCTAGCCACCACAAAGGAGGACCCGTCACTCGC | + |
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Preference number: 5 (lower is better) Translates to: RWDILFEEALVDNIP*WEVSSHHKGGPVTR Trigger: GCGAGTGACGGGTCCTCCTTTGTGGTGGCTAGATACTTCCCAGCAGGGAATATTGTCAACCAGGGCTTCTTCGAAGAGAATGTCCCACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| CDS CCA 90 bp | TGGGACATTCTCTTCGAAGAAGCCCTGGTTGACAATATTCCCTGCTaGGAAGTATCTAGCCACCACAAAGGAGGACCCGTCACTCGCAGA | + |
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Preference number: 5 (lower is better) Translates to: WDILFEEALVDNIPC*EVSSHHKGGPVTRR Trigger: TCTGCGAGTGACGGGTCCTCCTTTGTGGTGGCTAGATACTTCCCAGCAGGGAATATTGTCAACCAGGGCTTCTTCGAAGAGAATGTCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| CDS-3UTR CAA 90 bp | GCTTTGGGGCTTCCTCCAGGGAAGCTCACCCTCACCTCTGCTCTATTGACTTCACCCACGCCTATCTTCTaGGTATTCTTCCATACCATG | + |
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Preference number: 5 (lower is better) Translates to: ALGLPPGKLTLTSALLTSPTPIF*VFFHTM Trigger: CATGGTATGGAAGAATACCAAGAAGATAGGCGTGGG...TGAAGTCAATAGAGCAGAGGTGAGGGTGAGCTTCCCTGGAGGAAGCCCCAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| CDS-3UTR CAA 90 bp | CCACAATTGAACCTCTGGCTTGATCCCTCCCTGGCAGACGTGGTTAAATCAGTTTCGAAGAAGCCCTGGTaGACAATATTCCCTGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: PQLNLWLDPSLADVVKSVSKKPW*TIFPAG Trigger: CCCAGCAGGGAATATTGTCAACCAGGGCTTCTTCGA...AACTGATTTAACCACGTCTGCCAGGGAGGGATCAAGCCAGAGGTTCAATTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| CDS CAA 90 bp | ATTCTCGTGCTGGCCAGGGCCTCCGAATACTGCTGGGCTTCCCGGTaGAGCTTCTTACAAAGCTTCAGGGGCGGGACACCGTGCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: ILVLARASEYCWASR*SFLQSFRGGTPCWA Trigger: GGCCCAGCACGGTGTCCCGCCCCTGAAGCTTTGTAAGAAGCTCAACCGGGAAGCCCAGCAGTATTCGGAGGCCCTGGCCAGCACGAGAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030202.14 |
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| CDS CCA 72 bp | AGCTTCTTACAAAGCTTCAGGGGCGGGACACCGTGCTaGGCCCGGTACTCGTTGTGGGCCTTCAGGACCTCG | + |
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Preference number: 6 (lower is better) Translates to: SFLQSFRGGTPC*ARYSLWAFRTS Trigger: CGAGGTCCTGAAGGCCCACAACGAGTACCGGGCCCAGCACGGTGTCCCGCCCCTGAAGCTTTGTAAGAAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030202.14 |
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| CDS TCA 72 bp | TGGCCAGGGCCTCCGAATACTGCTGGGCTTCCCGGTTaGGCTTCTTACAAAGCTTCAGGGGCGGGACACCGT | + |
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Preference number: 6 (lower is better) Translates to: WPGPPNTAGLPG*ASYKASGAGHR Trigger: ACGGTGTCCCGCCCCTGAAGCTTTGTAAGAAGCTCAACCGGGAAGCCCAGCAGTATTCGGAGGCCCTGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030202.14 |
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| CDS GCA 72 bp | TTGAGCTTCTTACAAAGCTTCAGGGGCGGGACACCGTaGTGGGCCCGGTACTCGTTGTGGGCCTTCAGGACC | + |
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Preference number: 6 (lower is better) Translates to: LSFLQSFRGGTP*WARYSLWAFRT Trigger: GGTCCTGAAGGCCCACAACGAGTACCGGGCCCAGCACGGTGTCCCGCCCCTGAAGCTTTGTAAGAAGCTCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030202.14 |
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| CDS CCA 72 bp | CGCAAGGTTCTCTCCACACTGGCCACGACTGGACTCTaGGCTGTGCTTGAGAATTCTCGTGCTGGCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: RKVLSTLATTGL*AVLENSRAGQG Trigger: GCCCTGGCCAGCACGAGAATTCTCAAGCACAGCCCAGAGTCCAGTCGTGGCCAGTGTGGAGAGAACCTTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030202.14 |
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| CDS TCA 72 bp | CTCCACACTGGCCACGACTGGACTCTGGGCTGTGCTTaGGAATTCTCGTGCTGGCCAGGGCCTCCGAATACT | + |
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Preference number: 6 (lower is better) Translates to: LHTGHDWTLGCA*EFSCWPGPPNT Trigger: AGTATTCGGAGGCCCTGGCCAGCACGAGAATTCTCAAGCACAGCCCAGAGTCCAGTCGTGGCCAGTGTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030202.14 |
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| CDS GCA 72 bp | TTCTCTCCACACTGGCCACGACTGGACTCTGGGCTGTaGTTGAGAATTCTCGTGCTGGCCAGGGCCTCCGAA | + |
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Preference number: 6 (lower is better) Translates to: FSPHWPRLDSGL*LRILVLARASE Trigger: TTCGGAGGCCCTGGCCAGCACGAGAATTCTCAAGCACAGCCCAGAGTCCAGTCGTGGCCAGTGTGGAGAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030202.14 |
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| CDS CCA 72 bp | AGGGGCGGGACACCGTGCTGGGCCCGGTACTCGTTGTaGGCCTTCAGGACCTCGTTATTAAACTGTTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: RGGTPCWARYSL*AFRTSLLNCLE Trigger: TTCCAAACAGTTTAATAACGAGGTCCTGAAGGCCCACAACGAGTACCGGGCCCAGCACGGTGTCCCGCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030202.14 |
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| CDS CAA 72 bp | TTCAGGGGCGGGACACCGTGCTGGGCCCGGTACTCGTaGTGGGCCTTCAGGACCTCGTTATTAAACTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: FRGGTPCWARYS*WAFRTSLLNCL Trigger: CAAACAGTTTAATAACGAGGTCCTGAAGGCCCACAACGAGTACCGGGCCCAGCACGGTGTCCCGCCCCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030202.14 |
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| CDS CAA 90 bp | TTACAAAGCTTCAGGGGCGGGACACCGTGCTGGGCCCGGTACTCGTaGTGGGCCTTCAGGACCTCGTTATTAAACTGTTTGGAAGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: LQSFRGGTPCWARYS*WAFRTSLLNCLEAD Trigger: ATCAGCTTCCAAACAGTTTAATAACGAGGTCCTGAAGGCCCACAACGAGTACCGGGCCCAGCACGGTGTCCCGCCCCTGAAGCTTTGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030202.14 |
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| CDS GCA 72 bp | TCTAGCCACCACAAAGGAGGACCCGTCACTCGCAGATaGCTTCCCCACGCCTATCTTCTTGGTATTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: SSHHKGGPVTRR*LPHAYLLGILP Trigger: TGGAAGAATACCAAGAAGATAGGCGTGGGGAAGGCATCTGCGAGTGACGGGTCCTCCTTTGTGGTGGCTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| CDS CAA 90 bp | AAGGAGGACCCGTCACTCGCAGATGCCTTCCCCACGCCTATCTTCTaGGTATTCTTCCATACCATGGCTGTAAAGTGCCCAGTCCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: KEDPSLADAFPTPIF*VFFHTMAVKCPVPE Trigger: TTCAGGGACTGGGCACTTTACAGCCATGGTATGGAAGAATACCAAGAAGATAGGCGTGGGGAAGGCATCTGCGAGTGACGGGTCCTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| CDS CCA 72 bp | CTCTTCGAAGAAGCCCTGGTTGACAATATTCCCTGCTaGGAAGTATCTAGCCACCACAAAGGAGGACCCGTC | + |
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Preference number: 6 (lower is better) Translates to: LFEEALVDNIPC*EVSSHHKGGPV Trigger: GACGGGTCCTCCTTTGTGGTGGCTAGATACTTCCCAGCAGGGAATATTGTCAACCAGGGCTTCTTCGAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| CDS CAA 72 bp | CCGTCACTCGCAGATGCCTTCCCCACGCCTATCTTCTaGGTATTCTTCCATACCATGGCTGTAAAGTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: PSLADAFPTPIF*VFFHTMAVKCP Trigger: TGGGCACTTTACAGCCATGGTATGGAAGAATACCAAGAAGATAGGCGTGGGGAAGGCATCTGCGAGTGACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| CDS GCA 72 bp | ATTCTCTTCGAAGAAGCCCTGGTTGACAATATTCCCTaGTGGGAAGTATCTAGCCACCACAAAGGAGGACCC | + |
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Preference number: 6 (lower is better) Translates to: ILFEEALVDNIP*WEVSSHHKGGP Trigger: GGGTCCTCCTTTGTGGTGGCTAGATACTTCCCAGCAGGGAATATTGTCAACCAGGGCTTCTTCGAAGAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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| CDS CAA 72 bp | TTTGGAGGTGGGACATTCTCTTCGAAGAAGCCCTGGTaGACAATATTCCCTGCTGGGAAGTATCTAGCCACC | + |
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Preference number: 6 (lower is better) Translates to: FGGGTFSSKKPW*TIFPAGKYLAT Trigger: GGTGGCTAGATACTTCCCAGCAGGGAATATTGTCAACCAGGGCTTCTTCGAAGAGAATGTCCCACCTCCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030202.14 ENSMUST00000107855.2 |
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