Pregenerated sensors for GLIPR1L2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020214Ensembl transcript IDs: ENSMUST00000020434.4, ENSMUST00000148897.8
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACTCTCAGGAAGAGGATAAATATGCACATTGGATTACACACGACTaGGCGGGGCTTTTCCCAAGGTGGGTACCAGAACTGGTAGTATGT | + |
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Preference number: 1 (lower is better) Translates to: HSQEEDKYAHWITHD*AGLFPRWVPELVVC Trigger: ACATACTACCAGTTCTGGTACCCACCTTGGGAAAAGCCCCGCCCAGTCGTGTGTAATCCAATGTGCATATTTATCCTCTTCCTGAGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148897.8 |
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| 3UTR CAA 90 bp | TCCTGCATCTCTTCCTCTCCTTCCTCTGGGGTTATCTTCTTCCTATaGTTCATCTTCTTCCAGCATCTCTTCCTCTTCCTTTTCCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: SCISSSPSSGVIFFL*FIFFQHLFLFLFLS Trigger: GGAGAGGAAAAGGAAGAGGAAGAGATGCTGGAAGAAGATGAACAATAGGAAGAAGATAACCCCAGAGGAAGGAGAGGAAGAGATGCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148897.8 |
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| 3UTR-3UTR TCA 90 bp | GGCATCTTTTTGCTGATGTTGCTGCTCCTATTATCCATTCTCTGTGTCTTTAAGGGCTTTGGCTTCTATTaGGTTGTCTTCTTCCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: GIFLLMLLLLLSILCVFKGFGFY*VVFFLH Trigger: ATGCAGGAAGAAGACAACTCAATAGAAGCCAAAGCC...CTTAAAGACACAGAGAATGGATAATAGGAGCAGCAACATCAGCAAAAAGATGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020434.4 |
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| 3UTR-3UTR TCA 90 bp | TTCCCTTCCTCCTCTGCTGAAATTATCGTTGGAGTTTCCATTAAGATAACTGGAGGCTTTGGCTTCTATTaGGTTGTCTTCTTCCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: FPSSSAEIIVGVSIKITGGFGFY*VVFFLH Trigger: ATGCAGGAAGAAGACAACTCAATAGAAGCCAAAGCC...TCCAGTTATCTTAATGGAAACTCCAACGATAATTTCAGCAGAGGAGGAAGGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148897.8 |
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| 3UTR-3UTR CCA 90 bp | GGCATCTTTTTGCTGATGTTGCTGCTCCTATTATCCATTCTCTGTGTCTTTAAGTTTCCTGTTGGGCTTTaGCTTCTATTGAGTTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: GIFLLMLLLLLSILCVFKFPVGL*LLLSCL Trigger: AAGACAACTCAATAGAAGCCAAAGCCCAACAGGAAA...CTTAAAGACACAGAGAATGGATAATAGGAGCAGCAACATCAGCAAAAAGATGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020434.4 |
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| 3UTR-3UTR GCA 90 bp | ATTTATCAAATGGCTATTCTAAACTCAGAGTGGTCCTTAGTGTCTTATATGGACATATTTTCTGTACAATaGAAGCCTTGCATTCACACT | + |
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Preference number: 2 (lower is better) Translates to: IYQMAILNSEWSLVSYMDIFSVQ*KPCIHT Trigger: AGTGTGAATGCAAGGCTTGCATTGTACAGAAAATAT...GTCCATATAAGACACTAAGGACCACTCTGAGTTTAGAATAGCCATTTGATAAAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020434.4 |
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| 3UTR-3UTR CAA 90 bp | TCCTCTCCTTCCTCTGGGGTTATCTTCTTCCTATTGTTCATCTTCTTCCAGCATGGGCTTTGGCTTCTATaGAGTTGTCTTCTTCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: SSPSSGVIFFLLFIFFQHGLWLL*SCLLPA Trigger: TGCAGGAAGAAGACAACTCAATAGAAGCCAAAGCCC...ATGCTGGAAGAAGATGAACAATAGGAAGAAGATAACCCCAGAGGAAGGAGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148897.8 |
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| 3UTR-3UTR CAA 90 bp | GGCATCTTTTTGCTGATGTTGCTGCTCCTATTATCCATTCTCTGTGTCTTTAAGGGGCTTTGGCTTCTATaGAGTTGTCTTCTTCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: GIFLLMLLLLLSILCVFKGLWLL*SCLLPA Trigger: TGCAGGAAGAAGACAACTCAATAGAAGCCAAAGCCC...CTTAAAGACACAGAGAATGGATAATAGGAGCAGCAACATCAGCAAAAAGATGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020434.4 |
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| 3UTR-3UTR CAA 90 bp | GGCATCTTTTTGCTGATGTTGCTGCTCCTATTATCCATTCTCTGTGTCTTTAAGTTGGCTTCTATTGAGTaGTCTTCTTCCTGCATCTCT | + |
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Preference number: 3 (lower is better) Translates to: GIFLLMLLLLLSILCVFKLASIE*SSSCIS Trigger: AGAGATGCAGGAAGAAGACAACTCAATAGAAGCCAA...CTTAAAGACACAGAGAATGGATAATAGGAGCAGCAACATCAGCAAAAAGATGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020434.4 |
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| CDS-3UTR GCA 90 bp | TGCATCTCTTCCTCTCCTTCCTCTGGGGTTATCTTCTTCCTATTGTTCATCTTCCTCTTCCTCTCCTCATaGCAACTTCTGATGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: CISSSPSSGVIFFLLFIFLFLSS*QLLMAV Trigger: CACTGCCATCAGAAGTTGGCATGAGGAGAGGAAGAG...GAAGATGAACAATAGGAAGAAGATAACCCCAGAGGAAGGAGAGGAAGAGATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148897.8 |
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| CDS-3UTR CCA 90 bp | CCTGCATCTCTTCCTCTCCTTCCTCTGGGGTTATCTTCTTCCTATTGTTCATCTTTTTCCCCCATGCTCTaGCAGTACGCGATAAAGCTA | + |
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Preference number: 4 (lower is better) Translates to: PASLPLLPLGLSSSYCSSFSPML*QYAIKL Trigger: TAGCTTTATCGCGTACTGCCAGAGCATGGGGGAAAA...AGATGAACAATAGGAAGAAGATAACCCCAGAGGAAGGAGAGGAAGAGATGCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000148897.8 |
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| CDS-3UTR CCA 90 bp | TTCCCAAGGTGGGTACCAGAACTGGTAGTATGTAGCTTCATCACGAACTGTGTTTGTCAGGGTTCCTCCTaGTGCATAATTGCATATGAA | + |
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Preference number: 4 (lower is better) Translates to: FPRWVPELVVCSFITNCVCQGSS*CIIAYE Trigger: TTCATATGCAATTATGCACCAGGAGGAACCCTGACA...AACACAGTTCGTGATGAAGCTACATACTACCAGTTCTGGTACCCACCTTGGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148897.8 |
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| CDS-3UTR TCA 90 bp | GGCATCTTTTTGCTGATGTTGCTGCTCCTATTATCCATTCTCTGTGTCTTTAAGCCCTTCCTCCTCTGCTaGAATTATCGTTGGAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: GIFLLMLLLLLSILCVFKPFLLC*NYRWSF Trigger: GAAACTCCAACGATAATTTCAGCAGAGGAGGAAGGG...CTTAAAGACACAGAGAATGGATAATAGGAGCAGCAACATCAGCAAAAAGATGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020434.4 |
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| CDS-3UTR GCA 90 bp | ATCAGAACGACAATGACACATAGCAGCAAAGATGCCACTCTCAGGAAGAGGATAATTGCATATGAAAAGTaGTGCGTGTGTGAAACCTCC | + |
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Preference number: 4 (lower is better) Translates to: IRTTMTHSSKDATLRKRIIAYEK*CVCETS Trigger: GGAGGTTTCACACACGCAGCACTTTTCATATGCAAT...TATCCTCTTCCTGAGAGTGGCATCTTTGCTGCTATGTGTCATTGTCGTTCTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148897.8 |
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| CDS-3UTR TCA 90 bp | GGCATCTTTTTGCTGATGTTGCTGCTCCTATTATCCATTCTCTGTGTCTTTAAGCTATCAGAACGACAATaGCACATAGCAGCAAAGATG | + |
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Preference number: 4 (lower is better) Translates to: GIFLLMLLLLLSILCVFKLSERQ*HIAAKM Trigger: CATCTTTGCTGCTATGTGTCATTGTCGTTCTGATAG...CTTAAAGACACAGAGAATGGATAATAGGAGCAGCAACATCAGCAAAAAGATGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020434.4 |
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| CDS-3UTR GCA 90 bp | ATTTATCAAATGGCTATTCTAAACTCAGAGTGGTCCTTAGTGTCTTATATGGACCTCTTCCTCTCCTCATaGCAACTTCTGATGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: IYQMAILNSEWSLVSYMDLFLSS*QLLMAV Trigger: CACTGCCATCAGAAGTTGGCATGAGGAGAGGAAGAG...GTCCATATAAGACACTAAGGACCACTCTGAGTTTAGAATAGCCATTTGATAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020434.4 |
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| CDS-3UTR CCA 90 bp | ATTTATCAAATGGCTATTCTAAACTCAGAGTGGTCCTTAGTGTCTTATATGGACTTTTCCCCCATGCTCTaGCAGTACGCGATAAAGCTA | + |
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Preference number: 4 (lower is better) Translates to: IYQMAILNSEWSLVSYMDFSPML*QYAIKL Trigger: TAGCTTTATCGCGTACTGCCAGAGCATGGGGGAAAA...GTCCATATAAGACACTAAGGACCACTCTGAGTTTAGAATAGCCATTTGATAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020434.4 |
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| CDS-3UTR TCA 90 bp | GGCATCTTTTTGCTGATGTTGCTGCTCCTATTATCCATTCTCTGTGTCTTTAAGTGGAGTTTGTCTAGATaGGTATTACGGCTATACATA | + |
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Preference number: 4 (lower is better) Translates to: GIFLLMLLLLLSILCVFKWSLSR*VLRLYI Trigger: TATGTATAGCCGTAATACTCATCTAGACAAACTCCA...CTTAAAGACACAGAGAATGGATAATAGGAGCAGCAACATCAGCAAAAAGATGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020434.4 |
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| CDS-3UTR TCA 90 bp | CATAGCAGCAAAGATGCCACTCTCAGGAAGAGGATAAATATGCACATTGGATTATGGAGTTTGTCTAGATaGGTATTACGGCTATACATA | + |
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Preference number: 4 (lower is better) Translates to: HSSKDATLRKRINMHIGLWSLSR*VLRLYI Trigger: TATGTATAGCCGTAATACTCATCTAGACAAACTCCA...TAATCCAATGTGCATATTTATCCTCTTCCTGAGAGTGGCATCTTTGCTGCTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148897.8 |
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| CDS-3UTR GCA 90 bp | ATTTATCAAATGGCTATTCTAAACTCAGAGTGGTCCTTAGTGTCTTATATGGACATTGCATATGAAAAGTaGTGCGTGTGTGAAACCTCC | + |
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Preference number: 4 (lower is better) Translates to: IYQMAILNSEWSLVSYMDIAYEK*CVCETS Trigger: GGAGGTTTCACACACGCAGCACTTTTCATATGCAAT...GTCCATATAAGACACTAAGGACCACTCTGAGTTTAGAATAGCCATTTGATAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020434.4 |
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| CDS-3UTR GCA 90 bp | ATTTATCAAATGGCTATTCTAAACTCAGAGTGGTCCTTAGTGTCTTATATGGACCAGGGTTCCTCCTGGTaGATAATTGCATATGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: IYQMAILNSEWSLVSYMDQGSSW*IIAYEK Trigger: CTTTTCATATGCAATTATGCACCAGGAGGAACCCTG...GTCCATATAAGACACTAAGGACCACTCTGAGTTTAGAATAGCCATTTGATAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020434.4 |
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| CDS-3UTR CCA 90 bp | ATTTATCAAATGGCTATTCTAAACTCAGAGTGGTCCTTAGTGTCTTATATGGACTGTCAGGGTTCCTCCTaGTGCATAATTGCATATGAA | + |
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Preference number: 4 (lower is better) Translates to: IYQMAILNSEWSLVSYMDCQGSS*CIIAYE Trigger: TTCATATGCAATTATGCACCAGGAGGAACCCTGACA...GTCCATATAAGACACTAAGGACCACTCTGAGTTTAGAATAGCCATTTGATAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020434.4 |
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| CDS-3UTR CCA 90 bp | ATTTATCAAATGGCTATTCTAAACTCAGAGTGGTCCTTAGTGTCTTATATGGACGATAAATATGCACATTaGATTACACACGACTGGGCG | + |
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Preference number: 4 (lower is better) Translates to: IYQMAILNSEWSLVSYMDDKYAH*ITHDWA Trigger: CGCCCAGTCGTGTGTAATCCAATGTGCATATTTATC...GTCCATATAAGACACTAAGGACCACTCTGAGTTTAGAATAGCCATTTGATAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020434.4 |
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| CDS GCA 90 bp | CCTCCTTGTCAGGGTTCCTCCTGGTGCATAATTGCATATGAAAAGTaGTGCGTGTGTGAAACCTCCAGCCCTTGCACACGAAGTAACAGC | + |
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Preference number: 5 (lower is better) Translates to: PPCQGSSWCIIAYEK*CVCETSSPCTRSNS Trigger: GCTGTTACTTCGTGTGCAAGGGCTGGAGGTTTCACACACGCAGCACTTTTCATATGCAATTATGCACCAGGAGGAACCCTGACAAGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020434.4 ENSMUST00000148897.8 |
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| CDS GCA 90 bp | CCTTGTCAGGGTTCCTCCTGGTGCATAATTGCATATGAAAAGTGCTaGGTGTGTGAAACCTCCAGCCCTTGCACACGAAGTAACAGCACA | + |
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Preference number: 5 (lower is better) Translates to: PCQGSSWCIIAYEKC*VCETSSPCTRSNST Trigger: TGTGCTGTTACTTCGTGTGCAAGGGCTGGAGGTTTCACACACGCAGCACTTTTCATATGCAATTATGCACCAGGAGGAACCCTGACAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020434.4 ENSMUST00000148897.8 |
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| CDS GCA 90 bp | AAATTGCCCTGCTTGATAAGGCCTCCTTGTCAGGGTTCCTCCTGGTaGATAATTGCATATGAAAAGTGCTGCGTGTGTGAAACCTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: KLPCLIRPPCQGSSW*IIAYEKCCVCETSS Trigger: GCTGGAGGTTTCACACACGCAGCACTTTTCATATGCAATTATGCACCAGGAGGAACCCTGACAAGGAGGCCTTATCAAGCAGGGCAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020434.4 ENSMUST00000148897.8 |
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| CDS-3UTR CAA 90 bp | TTCCCTTCCTCCTCTGCTGAAATTATCGTTGGAGTTTCCATTAAGATAACTGGAACACCGAGAACAAAATaGCCCTGCTTGATAAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: FPSSSAEIIVGVSIKITGTPRTK*PCLIRP Trigger: AGGCCTTATCAAGCAGGGCAATTTTGTTCTCGGTGT...TCCAGTTATCTTAATGGAAACTCCAACGATAATTTCAGCAGAGGAGGAAGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148897.8 |
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| CDS-3UTR CAA 90 bp | ATTTATCAAATGGCTATTCTAAACTCAGAGTGGTCCTTAGTGTCTTATATGGACACACCGAGAACAAAATaGCCCTGCTTGATAAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: IYQMAILNSEWSLVSYMDTPRTK*PCLIRP Trigger: AGGCCTTATCAAGCAGGGCAATTTTGTTCTCGGTGT...GTCCATATAAGACACTAAGGACCACTCTGAGTTTAGAATAGCCATTTGATAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020434.4 |
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| CDS CCA 72 bp | AGCTACATCCCAAGTCATGAAGCGCAGGTTCACCCCTaGGGGGAAGACCGTGCCTCGAAGCTCATTATGGAG | + |
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Preference number: 6 (lower is better) Translates to: SYIPSHEAQVHP*GEDRASKLIME Trigger: CTCCATAATGAGCTTCGAGGCACGGTCTTCCCCCCAGGGGTGAACCTGCGCTTCATGACTTGGGATGTAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020434.4 ENSMUST00000148897.8 |
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| CDS CAA 72 bp | GTCTCCAGGGCCACACCGAGAACAAAATTGCCCTGCTaGATAAGGCCTCCTTGTCAGGGTTCCTCCTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: VSRATPRTKLPC*IRPPCQGSSWC Trigger: GCACCAGGAGGAACCCTGACAAGGAGGCCTTATCAAGCAGGGCAATTTTGTTCTCGGTGTGGCCCTGGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020434.4 ENSMUST00000148897.8 |
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| CDS GCA 72 bp | TTGGTCTCCAGGGCCACACCGAGAACAAAATTGCCCTaGTTGATAAGGCCTCCTTGTCAGGGTTCCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: LVSRATPRTKLP*LIRPPCQGSSW Trigger: CCAGGAGGAACCCTGACAAGGAGGCCTTATCAAGCAGGGCAATTTTGTTCTCGGTGTGGCCCTGGAGACCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020434.4 ENSMUST00000148897.8 |
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| CDS CAA 72 bp | TGTGCATTGGTCTCCAGGGCCACACCGAGAACAAAATaGCCCTGCTTGATAAGGCCTCCTTGTCAGGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: CALVSRATPRTK*PCLIRPPCQGS Trigger: GGAACCCTGACAAGGAGGCCTTATCAAGCAGGGCAATTTTGTTCTCGGTGTGGCCCTGGAGACCAATGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020434.4 ENSMUST00000148897.8 |
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| CDS CAA 90 bp | TGTGCATTGGTCTCCAGGGCCACACCGAGAACAAAATTGCCCTGCTaGATAAGGCCTCCTTGTCAGGGTTCCTCCTGGTGCATAATTGCA | + |
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Preference number: 6 (lower is better) Translates to: CALVSRATPRTKLPC*IRPPCQGSSWCIIA Trigger: TGCAATTATGCACCAGGAGGAACCCTGACAAGGAGGCCTTATCAAGCAGGGCAATTTTGTTCTCGGTGTGGCCCTGGAGACCAATGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020434.4 ENSMUST00000148897.8 |
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| CDS GCA 72 bp | CAGGGTTCCTCCTGGTGCATAATTGCATATGAAAAGTaGTGCGTGTGTGAAACCTCCAGCCCTTGCACACGA | + |
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Preference number: 6 (lower is better) Translates to: QGSSWCIIAYEK*CVCETSSPCTR Trigger: TCGTGTGCAAGGGCTGGAGGTTTCACACACGCAGCACTTTTCATATGCAATTATGCACCAGGAGGAACCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020434.4 ENSMUST00000148897.8 |
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| CDS GCA 72 bp | GGTTCCTCCTGGTGCATAATTGCATATGAAAAGTGCTaGGTGTGTGAAACCTCCAGCCCTTGCACACGAAGT | + |
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Preference number: 6 (lower is better) Translates to: GSSWCIIAYEKC*VCETSSPCTRS Trigger: ACTTCGTGTGCAAGGGCTGGAGGTTTCACACACGCAGCACTTTTCATATGCAATTATGCACCAGGAGGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020434.4 ENSMUST00000148897.8 |
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| CDS GCA 72 bp | TGCTTGATAAGGCCTCCTTGTCAGGGTTCCTCCTGGTaGATAATTGCATATGAAAAGTGCTGCGTGTGTGAA | + |
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Preference number: 6 (lower is better) Translates to: CLIRPPCQGSSW*IIAYEKCCVCE Trigger: TTCACACACGCAGCACTTTTCATATGCAATTATGCACCAGGAGGAACCCTGACAAGGAGGCCTTATCAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020434.4 ENSMUST00000148897.8 |
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| CDS GCA 72 bp | CTTCATCACGAACTGTGTTACTGCATAGGTAGTCTGTaGATTGGTCTCCAGGGCCACACCGAGAACAAAATT | + |
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Preference number: 6 (lower is better) Translates to: LHHELCYCIGSL*IGLQGHTENKI Trigger: AATTTTGTTCTCGGTGTGGCCCTGGAGACCAATGCACAGACTACCTATGCAGTAACACAGTTCGTGATGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020434.4 |
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| CDS CAA 90 bp | CCCACATATTCATTGATAAAGTCTACATCCTCTTCAAGCGGAAGTTaGGCGTTCAAACCTGAGCCCACCAATAGAAGCCACAGTTCACAC | + |
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Preference number: 6 (lower is better) Translates to: PTYSLIKSTSSSSGS*AFKPEPTNRSHSSH Trigger: GTGTGAACTGTGGCTTCTATTGGTGGGCTCAGGTTTGAACGCCAAACTTCCGCTTGAAGAGGATGTAGACTTTATCAATGAATATGTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020434.4 ENSMUST00000148897.8 |
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| CDS CAA 90 bp | GGGAAGACCGTGCCTCGAAGCTCATTATGGAGACCCACATATTCATaGATAAAGTCTACATCCTCTTCAAGCGGAAGTTTGGCGTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: GKTVPRSSLWRPTYS*IKSTSSSSGSLAFK Trigger: TTTGAACGCCAAACTTCCGCTTGAAGAGGATGTAGACTTTATCAATGAATATGTGGGTCTCCATAATGAGCTTCGAGGCACGGTCTTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020434.4 ENSMUST00000148897.8 |
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| CDS CAA 72 bp | TCATTGATAAAGTCTACATCCTCTTCAAGCGGAAGTTaGGCGTTCAAACCTGAGCCCACCAATAGAAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: SLIKSTSSSSGS*AFKPEPTNRSH Trigger: GTGGCTTCTATTGGTGGGCTCAGGTTTGAACGCCAAACTTCCGCTTGAAGAGGATGTAGACTTTATCAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020434.4 ENSMUST00000148897.8 |
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