RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GLI3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021318

Ensembl transcript IDs: ENSMUST00000110510.4, ENSMUST00000130065.8

Found 383 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTGAAAGCCAAGGCAGAGTTCATGTTTCTGGGCTGCCATTCTCATaGCTTAGGAGCACTGAGCAGCCACAGGCTTTTCCAAGGAAGGCC +
Preference number: 1 (lower is better)
Translates to: SESQGRVHVSGLPFS*LRSTEQPQAFPRKA
Trigger: GGCCTTCCTTGGAAAAGCCTGTGGCTGCTCAGTGCTCCTAAGCCATGAGAATGGCAGCCCAGAAACATGAACTCTGCCTTGGCTTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR TCA 90 bp CCTTTGATTTATAAGGAACCTCTGGGAGAAGGCTGCAGGGCACGGTaGACTTACAGATGGTTTGACTGGTCCTGGGGACATCTATCAGAA +
Preference number: 1 (lower is better)
Translates to: PLIYKEPLGEGCRAR*TYRWFDWSWGHLSE
Trigger: TTCTGATAGATGTCCCCAGGACCAGTCAAACCATCTGTAAGTTCACCGTGCCCTGCAGCCTTCTCCCAGAGGTTCCTTATAAATCAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR CCA 90 bp ATGAGAGAGCCAAAGCTGTTTCTCCTAAATACAAGAGCCAAGGACTaGAAAGGGGCTGCTGACCAGGAGTGGGATTTTGACAGGAAAGAC +
Preference number: 1 (lower is better)
Translates to: MREPKLFLLNTRAKD*KGAADQEWDFDRKD
Trigger: GTCTTTCCTGTCAAAATCCCACTCCTGGTCAGCAGCCCCTTTCCAGTCCTTGGCTCTTGTATTTAGGAGAAACAGCTTTGGCTCTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR CCA 90 bp GAGAAACATAAAATAAGGCACATACATTGCAAGAATCAAAACCCGTaGCTCAGGACAAGCCAACACGTGAGGAGCAGGGAAGTGAGTTCT +
Preference number: 1 (lower is better)
Translates to: EKHKIRHIHCKNQNP*LRTSQHVRSREVSS
Trigger: AGAACTCACTTCCCTGCTCCTCACGTGTTGGCTTGTCCTGAGCCACGGGTTTTGATTCTTGCAATGTATGTGCCTTATTTTATGTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR GCA 90 bp ACTTCGTACCAAAAAGCTAAAAGTGTGACACATCTGAACACCAACTaGCTGTCCACTCTCACTGCAGTGCTAAATAACACTGAATGTTCA +
Preference number: 1 (lower is better)
Translates to: TSYQKAKSVTHLNTN*LSTLTAVLNNTECS
Trigger: TGAACATTCAGTGTTATTTAGCACTGCAGTGAGAGTGGACAGGCAGTTGGTGTTCAGATGTGTCACACTTTTAGCTTTTTGGTACGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR TCA 90 bp AGTACCATGTATGAGCCTGTACTTTCATTAAAAAGCAGCTGTGTGTaGCATGAGAGAGCCAAAGCTGTTTCTCCTAAATACAAGAGCCAA +
Preference number: 1 (lower is better)
Translates to: STMYEPVLSLKSSCV*HERAKAVSPKYKSQ
Trigger: TTGGCTCTTGTATTTAGGAGAAACAGCTTTGGCTCTCTCATGTCACACACAGCTGCTTTTTAATGAAAGTACAGGCTCATACATGGTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR TCA 90 bp AATGTTCATAAAGGTGAAGGGAATGTACAGGAGATAATGGAGAGCTaGCCATATAGACATACCCACGGGATGCGTACTTACATAAGAATT +
Preference number: 1 (lower is better)
Translates to: NVHKGEGNVQEIMES*PYRHTHGMRTYIRI
Trigger: AATTCTTATGTAAGTACGCATCCCGTGGGTATGTCTATATGGTCAGCTCTCCATTATCTCCTGTACATTCCCTTCACCTTTATGAACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR CAA 90 bp AACCTCTGGGAGAAGGCTGCAGGGCACGGTGAACTTACAGATGGTTaGACTGGTCCTGGGGACATCTATCAGAAAGCTAGCTTAGCCACA +
Preference number: 2 (lower is better)
Translates to: NLWEKAAGHGELTDG*TGPGDIYQKASLAT
Trigger: TGTGGCTAAGCTAGCTTTCTGATAGATGTCCCCAGGACCAGTCAAACCATCTGTAAGTTCACCGTGCCCTGCAGCCTTCTCCCAGAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR CAA 90 bp CAAGAGCCAAGGACTGGAAAGGGGCTGCTGACCAGGAGTGGGATTTaGACAGGAAAGACCAAGCCTAAAGAGATCTCATGTCCCATGGGT +
Preference number: 2 (lower is better)
Translates to: QEPRTGKGLLTRSGI*TGKTKPKEISCPMG
Trigger: ACCCATGGGACATGAGATCTCTTTAGGCTTGGTCTTTCCTGTCAAAATCCCACTCCTGGTCAGCAGCCCCTTTCCAGTCCTTGGCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR CCA 90 bp CAGGAAAGACCAAGCCTAAAGAGATCTCATGTCCCATGGGTTAGCTATAGTGACAGAAGGCAGGGGTGCTaGCTCTGTGCACTGCATTCC +
Preference number: 2 (lower is better)
Translates to: QERPSLKRSHVPWVSYSDRRQGC*LCALHS
Trigger: GGAATGCAGTGCACAGAGCCAGCACCCCTGCCTTCT...GTCACTATAGCTAACCCATGGGACATGAGATCTCTTTAGGCTTGGTCTTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR TCA 90 bp CAGGAAAGACCAAGCCTAAAGAGATCTCATGTCCCATGGGTTAGCTATAGTGACAGGAGGCAATGGGTGTaGCCAGAAACCAAGCTCATT +
Preference number: 2 (lower is better)
Translates to: QERPSLKRSHVPWVSYSDRRQWV*PETKLI
Trigger: AATGAGCTTGGTTTCTGGTCACACCCATTGCCTCCT...GTCACTATAGCTAACCCATGGGACATGAGATCTCTTTAGGCTTGGTCTTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR TCA 90 bp TTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACACCCTCCTAGCAGCCTCTGAGTGCTaGCTGGACAACAACAACAAC +
Preference number: 2 (lower is better)
Translates to: LHICRIYKRNLSEENTLLAASEC*LDNNNN
Trigger: GTTGTTGTTGTTGTCCAGTCAGCACTCAGAGGCTGC...TAGGAGGGTGTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR CAA 90 bp GCTGCAGGAGGCAATGGGTGTGACCAGAAACCAAGCTCATTCTTCTaGCTGAGGAAGGAAGAATTCCTGAACCCCTTCTTTGAAATCAAA +
Preference number: 2 (lower is better)
Translates to: AAGGNGCDQKPSSFF*LRKEEFLNPFFEIK
Trigger: TTTGATTTCAAAGAAGGGGTTCAGGAATTCTTCCTTCCTCAGCAAGAAGAATGAGCTTGGTTTCTGGTCACACCCATTGCCTCCTGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR TCA 90 bp TTTCTTGTGGGCTGTCCTTTGATTTATAAGGAACCTCTGGGAGAAGGCTGCAGGAAGTTTCTTCCCTGGTaGAGTTTGGGCTCCAAAAGA +
Preference number: 2 (lower is better)
Translates to: FLVGCPLIYKEPLGEGCRKFLPW*SLGSKR
Trigger: TCTTTTGGAGCCCAAACTTCACCAGGGAAGAAACTT...CCTGCAGCCTTCTCCCAGAGGTTCCTTATAAATCAAAGGACAGCCCACAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR TCA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACGTGTTCACTTCCTGGTaGCACTGTCTGGGCATGCAG +
Preference number: 2 (lower is better)
Translates to: QFILHICRIYKRNLSEENVFTSW*HCLGMQ
Trigger: CTGCATGCCCAGACAGTGTCACCAGGAAGTGAACAC...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR GCA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACGTAAGAAGGCAGGGGTaGTGGCTCTGTGCACTGCAT +
Preference number: 2 (lower is better)
Translates to: QFILHICRIYKRNLSEENVRRQG*WLCALH
Trigger: ATGCAGTGCACAGAGCCAGCACCCCTGCCTTCTTAC...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR CCA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACACAAGAGCCAAGGACTaGAAAGGGGCTGCTGACCAG +
Preference number: 2 (lower is better)
Translates to: QFILHICRIYKRNLSEENTRAKD*KGAADQ
Trigger: CTGGTCAGCAGCCCCTTTCCAGTCCTTGGCTCTTGT...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR CCA 90 bp TTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACACCCTCCTACCTCTGAGTGCTGACTaGACAACAACAACAACTGGT +
Preference number: 2 (lower is better)
Translates to: LHICRIYKRNLSEENTLLPLSAD*TTTTTG
Trigger: ACCAGTTGTTGTTGTTGTCCAGTCAGCACTCAGAGG...TAGGAGGGTGTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR TCA 90 bp TTTCTTGTGGGCTGTCCTTTGATTTATAAGGAACCTCTGGGAGAAGGCTGCAGGCACATCCCAATCAGGTaGGATGAGATTGCTAAAATA +
Preference number: 2 (lower is better)
Translates to: FLVGCPLIYKEPLGEGCRHIPIR*DEIAKI
Trigger: TATTTTAGCAATCTCATCTCACCTGATTGGGATGTG...CCTGCAGCCTTCTCCCAGAGGTTCCTTATAAATCAAAGGACAGCCCACAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR TCA 90 bp TTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACACCCTCCTAGAGATAATGGAGAGCTaGCCATATAGACATACCCAC +
Preference number: 2 (lower is better)
Translates to: LHICRIYKRNLSEENTLLEIMES*PYRHTH
Trigger: GTGGGTATGTCTATATGGTCAGCTCTCCATTATCTC...TAGGAGGGTGTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR TCA 90 bp CAGGAAAGACCAAGCCTAAAGAGATCTCATGTCCCATGGGTTAGCTATAGTGACTGTGTACACACAGTATaGCTCTCATATCTGATCTAC +
Preference number: 2 (lower is better)
Translates to: QERPSLKRSHVPWVSYSDCVHTV*LSYLIY
Trigger: GTAGATCAGATATGAGAGTCATACTGTGTGTACACA...GTCACTATAGCTAACCCATGGGACATGAGATCTCTTTAGGCTTGGTCTTTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR CCA 90 bp TTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACACCCTCCTATTCCCTGGTGAAGTTTaGGCTCCAAAAGAGAGAAAA +
Preference number: 2 (lower is better)
Translates to: LHICRIYKRNLSEENTLLFPGEV*APKERK
Trigger: TTTTCTCTCTTTTGGAGCCCAAACTTCACCAGGGAA...TAGGAGGGTGTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR CCA 90 bp AGTGACCAAATGATCATTCTTGAACTGGACTATCAGGACAGATTGGTGAAATCTTGGTTTGACTGGTCCTaGGGACATCTATCAGAAAGC +
Preference number: 2 (lower is better)
Translates to: SDQMIILELDYQDRLVKSWFDWS*GHLSES
Trigger: GCTTTCTGATAGATGTCCCCAGGACCAGTCAAACCA...AGATTTCACCAATCTGTCCTGATAGTCCAGTTCAAGAATGATCATTTGGTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR TCA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACTATCTGATCTACATGTaGAGAGCAGCTGCACTGTGT +
Preference number: 2 (lower is better)
Translates to: QFILHICRIYKRNLSEENYLIYM*RAAALC
Trigger: ACACAGTGCAGCTGCTCTTCACATGTAGATCAGATA...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR TCA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACTTGTGGGCTGTCCTTTaGTTTATAAGGAACCTCTGG +
Preference number: 2 (lower is better)
Translates to: QFILHICRIYKRNLSEENLWAVL*FIRNLW
Trigger: CCAGAGGTTCCTTATAAATCAAAGGACAGCCCACAA...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR GCA 90 bp CAGGAAAGACCAAGCCTAAAGAGATCTCATGTCCCATGGGTTAGCTATAGTGACAAGCTGTTAAAAGTATaGCCTGAATTGAATCAAGGT +
Preference number: 2 (lower is better)
Translates to: QERPSLKRSHVPWVSYSDKLLKV*PELNQG
Trigger: ACCTTGATTCAATTCAGGGCATACTTTTAACAGCTT...GTCACTATAGCTAACCCATGGGACATGAGATCTCTTTAGGCTTGGTCTTTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR CCA 90 bp CAGGAAAGACCAAGCCTAAAGAGATCTCATGTCCCATGGGTTAGCTATAGTGACAGTATACATTTACATTaGTTCACTCAAAAGAGGGCA +
Preference number: 2 (lower is better)
Translates to: QERPSLKRSHVPWVSYSDSIHLH*FTQKRA
Trigger: TGCCCTCTTTTGAGTGAACCAATGTAAATGTATACT...GTCACTATAGCTAACCCATGGGACATGAGATCTCTTTAGGCTTGGTCTTTCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR TCA 90 bp AGTGACCAAATGATCATTCTTGAACTGGACTATCAGGACAGATTGGTGAAATCTGAAAATCACTGCACTTaGGAACATCAAGGTCACATG +
Preference number: 2 (lower is better)
Translates to: SDQMIILELDYQDRLVKSENHCT*EHQGHM
Trigger: CATGTGACCTTGATGTTCTCAAGTGCAGTGATTTTC...AGATTTCACCAATCTGTCCTGATAGTCCAGTTCAAGAATGATCATTTGGTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR TCA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACCCAAATGATCATTCTTaGACTGGACTATCAGGACAG +
Preference number: 2 (lower is better)
Translates to: QFILHICRIYKRNLSEENPNDHS*TGLSGQ
Trigger: CTGTCCTGATAGTCCAGTTCAAGAATGATCATTTGG...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR CAA 90 bp TTCCTAGTTCCTGGGTTAGCAGAGAAGCAGGCCAAATCTTTTAACTaGATGACTTCTCTTCTAAAAGAAAGAACATGCGCAGTATACATT +
Preference number: 2 (lower is better)
Translates to: FLVPGLAEKQAKSFN*MTSLLKERTCAVYI
Trigger: AATGTATACTGCGCATGTTCTTTCTTTTAGAAGAGAAGTCATCAAGTTAAAAGATTTGGCCTGCTTCTCTGCTAACCCAGGAACTAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR TCA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACATTCCATGTTGGGGCTaGTGGGTAAACACTTTAATT +
Preference number: 2 (lower is better)
Translates to: QFILHICRIYKRNLSEENIPCWG*WVNTLI
Trigger: AATTAAAGTGTTTACCCATCAGCCCCAACATGGAAT...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR GCA 90 bp AGTGACCAAATGATCATTCTTGAACTGGACTATCAGGACAGATTGGTGAAATCTTATCCAGTTGTGGGCTaGTTAAATACCTACTTAGAG +
Preference number: 2 (lower is better)
Translates to: SDQMIILELDYQDRLVKSYPVVG*LNTYLE
Trigger: CTCTAAGTAGGTATTTAAGCAGCCCACAACTGGATA...AGATTTCACCAATCTGTCCTGATAGTCCAGTTCAAGAATGATCATTTGGTCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR TCA 90 bp GGCTGCTTAAATACCTACTTAGAGCTATGTATAGTCAATTCAATTCTCAGTTACGTTAAAAGTATGCCCTaGATTGAATCAAGGTGGAGG +
Preference number: 2 (lower is better)
Translates to: GCLNTYLELCIVNSILSYVKSMP*IESRWR
Trigger: CCTCCACCTTGATTCAATTCAGGGCATACTTTTAAC...GTAACTGAGAATTGAATTGACTATACATAGCTCTAAGTAGGTATTTAAGCAGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR CCA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACAGATTGGTGAAATCTTaGGATAGAACACTTTTGACT +
Preference number: 2 (lower is better)
Translates to: QFILHICRIYKRNLSEENRLVKS*DRTLLT
Trigger: AGTCAAAAGTGTTCTATCCCAAGATTTCACCAATCT...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR TCA 72 bp TATAAGGAACCTCTGGGAGAAGGCTGCAGGGCACGGTaGACTTACAGATGGTTTGACTGGTCCTGGGGACAT +
Preference number: 3 (lower is better)
Translates to: YKEPLGEGCRAR*TYRWFDWSWGH
Trigger: ATGTCCCCAGGACCAGTCAAACCATCTGTAAGTTCACCGTGCCCTGCAGCCTTCTCCCAGAGGTTCCTTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR TCA 72 bp TCACTTCCTGGTGACACTGTCTGGGCATGCAGCCTCTaGGTGCTGACTGGACAACAACAACAACTGGTCCTT +
Preference number: 3 (lower is better)
Translates to: SLPGDTVWACSL*VLTGQQQQLVL
Trigger: AAGGACCAGTTGTTGTTGTTGTCCAGTCAGCACTCAGAGGCTGCATGCCCAGACAGTGTCACCAGGAAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR GCA 72 bp GTTCTGAAAGCCAAGGCAGAGTTCATGTTTCTGGGCTaGCATTCTCATGGCTTAGGAGCACTGAGCAGCCAC +
Preference number: 3 (lower is better)
Translates to: VLKAKAEFMFLG*HSHGLGALSSH
Trigger: GTGGCTGCTCAGTGCTCCTAAGCCATGAGAATGGCAGCCCAGAAACATGAACTCTGCCTTGGCTTTCAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR CCA 72 bp CAAGGCAGAGTTCATGTTTCTGGGCTGCCATTCTCATaGCTTAGGAGCACTGAGCAGCCACAGGCTTTTCCA +
Preference number: 3 (lower is better)
Translates to: QGRVHVSGLPFS*LRSTEQPQAFP
Trigger: TGGAAAAGCCTGTGGCTGCTCAGTGCTCCTAAGCCATGAGAATGGCAGCCCAGAAACATGAACTCTGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR TCA 72 bp CAGACCAGTAATTCCCCTTTCTTGTGGGCTGTCCTTTaGTTTATAAGGAACCTCTGGGAGAAGGCTGCAGGG +
Preference number: 3 (lower is better)
Translates to: QTSNSPFLWAVL*FIRNLWEKAAG
Trigger: CCCTGCAGCCTTCTCCCAGAGGTTCCTTATAAATCAAAGGACAGCCCACAAGAAAGGGGAATTACTGGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR CAA 90 bp TTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACACCCTCCTATGGGGAAATTCCATGTaGGGGCTGATGGGTAAACAC +
Preference number: 3 (lower is better)
Translates to: LHICRIYKRNLSEENTLLWGNSM*GLMGKH
Trigger: GTGTTTACCCATCAGCCCCAACATGGAATTTCCCCA...TAGGAGGGTGTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR CCA 72 bp AAAATAAGGCACATACATTGCAAGAATCAAAACCCGTaGCTCAGGACAAGCCAACACGTGAGGAGCAGGGAA +
Preference number: 3 (lower is better)
Translates to: KIRHIHCKNQNP*LRTSQHVRSRE
Trigger: TTCCCTGCTCCTCACGTGTTGGCTTGTCCTGAGCCACGGGTTTTGATTCTTGCAATGTATGTGCCTTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR TCA 72 bp AAAGGTGAAGGGAATGTACAGGAGATAATGGAGAGCTaGCCATATAGACATACCCACGGGATGCGTACTTAC +
Preference number: 3 (lower is better)
Translates to: KGEGNVQEIMES*PYRHTHGMRTY
Trigger: GTAAGTACGCATCCCGTGGGTATGTCTATATGGTCAGCTCTCCATTATCTCCTGTACATTCCCTTCACCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR CAA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACTGGACCTGTTACCCCTaGGTCACAAGCCCACCAATT +
Preference number: 3 (lower is better)
Translates to: QFILHICRIYKRNLSEENWTCYP*VTSPPI
Trigger: AATTGGTGGGCTTGTGACCAAGGGGTAACAGGTCCA...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR CAA 90 bp TTTCTTGTGGGCTGTCCTTTGATTTATAAGGAACCTCTGGGAGAAGGCTGCAGGATAAAAGGAATATACTaGAGACACATCCCAATCAGG +
Preference number: 3 (lower is better)
Translates to: FLVGCPLIYKEPLGEGCRIKGIY*RHIPIR
Trigger: CCTGATTGGGATGTGTCTCAAGTATATTCCTTTTAT...CCTGCAGCCTTCTCCCAGAGGTTCCTTATAAATCAAAGGACAGCCCACAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR CAA 90 bp AGTGACCAAATGATCATTCTTGAACTGGACTATCAGGACAGATTGGTGAAATCTGAACTTACAGATGGTTaGACTGGTCCTGGGGACATC +
Preference number: 3 (lower is better)
Translates to: SDQMIILELDYQDRLVKSELTDG*TGPGDI
Trigger: GATGTCCCCAGGACCAGTCAAACCATCTGTAAGTTC...AGATTTCACCAATCTGTCCTGATAGTCCAGTTCAAGAATGATCATTTGGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR TCA 72 bp TTGAGGCAAAAAGAAGCCTTGCTTTATTTACTCTCCTaGACTCAGACCAGTAATTCCCCTTTCTTGTGGGCT +
Preference number: 3 (lower is better)
Translates to: LRQKEALLYLLS*TQTSNSPFLWA
Trigger: AGCCCACAAGAAAGGGGAATTACTGGTCTGAGTTCAGGAGAGTAAATAAAGCAAGGCTTCTTTTTGCCTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR TCA 72 bp GATCTCATGTCCCATGGGTTAGCTATAGTGACCAAATaGTCATTCTTGAACTGGACTATCAGGACAGATTGG +
Preference number: 3 (lower is better)
Translates to: DLMSHGLAIVTK*SFLNWTIRTDW
Trigger: CCAATCTGTCCTGATAGTCCAGTTCAAGAATGATCATTTGGTCACTATAGCTAACCCATGGGACATGAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR CAA 90 bp TTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACACCCTCCTACAGTATACATTTACATaGGTTCACTCAAAAGAGGGC +
Preference number: 3 (lower is better)
Translates to: LHICRIYKRNLSEENTLLQYTFT*VHSKEG
Trigger: GCCCTCTTTTGAGTGAACCAATGTAAATGTATACTG...TAGGAGGGTGTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR CAA 90 bp TTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACACCCTCCTAAATAAGGCACATACATaGCAAGAATCAAAACCCGTG +
Preference number: 3 (lower is better)
Translates to: LHICRIYKRNLSEENTLLNKAHT*QESKPV
Trigger: CACGGGTTTTGATTCTTGCAATGTATGTGCCTTATT...TAGGAGGGTGTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR TCA 72 bp CTGAACTCTGTGTACACACAGTATGACTCTCATATCTaGTCTACATGTGAAGAGCAGCTGCACTGTGTAAAT +
Preference number: 3 (lower is better)
Translates to: LNSVYTQYDSHI*STCEEQLHCVN
Trigger: ATTTACACAGTGCAGCTGCTCTTCACATGTAGATCAGATATGAGAGTCATACTGTGTGTACACAGAGTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR GCA 72 bp TGGTGGCGAAAAGGAACACAGTTTATTTTACACATCTaGAGGATATACAAGCGTAACTTGTCAGAGGAGAAC +
Preference number: 3 (lower is better)
Translates to: WWRKGTQFILHI*RIYKRNLSEEN
Trigger: GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTGTGTTCCTTTTCGCCACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR CCA 72 bp CAGGAAAGACCAAGCCTAAAGAGATCTCATGTCCCATaGGTTAGCTATAGTGACCAAATGATCATTCTTGAA +
Preference number: 3 (lower is better)
Translates to: QERPSLKRSHVP*VSYSDQMIILE
Trigger: TTCAAGAATGATCATTTGGTCACTATAGCTAACCCATGGGACATGAGATCTCTTTAGGCTTGGTCTTTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR CAA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATGACACTGTGACCTGTTaGAGGCAAAAAGAAGCCTTG +
Preference number: 3 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNDTVTC*RQKEAL
Trigger: CAAGGCTTCTTTTTGCCTCAAACAGGTCACAGTGTC...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR CAA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACAAGTCATTTCAGTCTTaGTGTTTGTGGTCCTCCTTG +
Preference number: 3 (lower is better)
Translates to: QFILHICRIYKRNLSEENKSFQS*CLWSSL
Trigger: CAAGGAGGACCACAAACACAAAGACTGAAATGACTT...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR CAA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATCTTGTGGGCTGTCCTTaGATTTATAAGGAACCTCTG +
Preference number: 3 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNLVGCP*IYKEPL
Trigger: CAGAGGTTCCTTATAAATCAAAGGACAGCCCACAAG...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR-3UTR CAA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATCCAAGCTCATTCTTCTaGCTGAGGAAGGAAGAATTC +
Preference number: 3 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNPSSFF*LRKEEF
Trigger: GAATTCTTCCTTCCTCAGCAAGAAGAATGAGCTTGG...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR CCA 72 bp CTGAAATCTTCATATCAAGAAAGGTCAGATAGTGAGTaGAAACATCAACTCCAAAAATCTAAAGGCAATAGC +
Preference number: 3 (lower is better)
Translates to: LKSSYQERSDSE*KHQLQKSKGNS
Trigger: GCTATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTGATATGAAGATTTCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp CAGAAAGCTAGCTTAGCCACAACGTCATCCTACATGGCAAAGTTTCTTCCCTGGTTCCTGCTGGCCCCGTaGCCCTGGGCTGGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: QKASLATTSSYMAKFLPWFLLAP*PWAGEV
Trigger: GACCTCCCCAGCCCAGGGTCACGGGGCCAGCAGGAA...CCAGGGAAGAAACTTTGCCATGTAGGATGACGTTGTGGCTAAGCTAGCTTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp CAGAAAGCTAGCTTAGCCACAACGTCATCCTACATGGCAAAGTTTCTTCCCTGGGGGCGGCTGGGCCCCTaGTGTTGCATGCTGCCACTG +
Preference number: 4 (lower is better)
Translates to: QKASLATTSSYMAKFLPWGRLGP*CCMLPL
Trigger: CAGTGGCAGCATGCAACACCAGGGGCCCAGCCGCCC...CCAGGGAAGAAACTTTGCCATGTAGGATGACGTTGTGGCTAAGCTAGCTTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp TTTCTTGTGGGCTGTCCTTTGATTTATAAGGAACCTCTGGGAGAAGGCTGCAGGCAGAGGTGTGGGTGGTaGGCCACCTGTGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FLVGCPLIYKEPLGEGCRQRCGW*ATCGSC
Trigger: GCAGCTGCCACAGGTGGCCCACCACCCACACCTCTG...CCTGCAGCCTTCTCCCAGAGGTTCCTTATAAATCAAAGGACAGCCCACAAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp TTTCTTGTGGGCTGTCCTTTGATTTATAAGGAACCTCTGGGAGAAGGCTGCAGGTGGGAATGGGAGGGATaGCCGCGGAGTGGTGAGACG +
Preference number: 4 (lower is better)
Translates to: FLVGCPLIYKEPLGEGCRWEWEG*PRSGET
Trigger: CGTCTCACCACTCCGCGGGCATCCCTCCCATTCCCA...CCTGCAGCCTTCTCCCAGAGGTTCCTTATAAATCAAAGGACAGCCCACAAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp TTTCTTGTGGGCTGTCCTTTGATTTATAAGGAACCTCTGGGAGAAGGCTGCAGGCGCTGGACCTGCGGCTaGAAAAGCAGGGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: FLVGCPLIYKEPLGEGCRRWTCG*KSRGRC
Trigger: GCATCTCCCCCTGCTTTTCCAGCCGCAGGTCCAGCG...CCTGCAGCCTTCTCCCAGAGGTTCCTTATAAATCAAAGGACAGCCCACAAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp CAGGAAAGACCAAGCCTAAAGAGATCTCATGTCCCATGGGTTAGCTATAGTGACGTTGACCAGGGCGGCTaGGCCCCTGGTGTTGCATGC +
Preference number: 4 (lower is better)
Translates to: QERPSLKRSHVPWVSYSDVDQGG*APGVAC
Trigger: GCATGCAACACCAGGGGCCCAGCCGCCCTGGTCAAC...GTCACTATAGCTAACCCATGGGACATGAGATCTCTTTAGGCTTGGTCTTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp CAGAAAGCTAGCTTAGCCACAACGTCATCCTACATGGCAAAGTTTCTTCCCTGGCAGAAGGGCCAGAGCTaGCCTGGACGGGGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: QKASLATTSSYMAKFLPWQKGQS*PGRGSE
Trigger: TTCTGAACCCCGTCCAGGTCAGCTCTGGCCCTTCTG...CCAGGGAAGAAACTTTGCCATGTAGGATGACGTTGTGGCTAAGCTAGCTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp CAGGAAAGACCAAGCCTAAAGAGATCTCATGTCCCATGGGTTAGCTATAGTGACGGGAGGGCAAGGGGATaGCTGGAAGTACCGGGGTTG +
Preference number: 4 (lower is better)
Translates to: QERPSLKRSHVPWVSYSDGRARG*LEVPGL
Trigger: CAACCCCGGTACTTCCAGGCATCCCCTTGCCCTCCC...GTCACTATAGCTAACCCATGGGACATGAGATCTCTTTAGGCTTGGTCTTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp TTTCTTGTGGGCTGTCCTTTGATTTATAAGGAACCTCTGGGAGAAGGCTGCAGGGCCACACTCACATTCTaGGGTCGCCCTTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: FLVGCPLIYKEPLGEGCRATLTF*GRPSAW
Trigger: CCAGGCTGAAGGGCGACCCCAGAATGTGAGTGTGGC...CCTGCAGCCTTCTCCCAGAGGTTCCTTATAAATCAAAGGACAGCCCACAAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp TTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACACCCTCCTATGTGGGGCAGAGGTGTaGGTGGTGGGCCACCTGTGG +
Preference number: 4 (lower is better)
Translates to: LHICRIYKRNLSEENTLLCGAEV*VVGHLW
Trigger: CCACAGGTGGCCCACCACCCACACCTCTGCCCCACA...TAGGAGGGTGTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp CAGAAAGCTAGCTTAGCCACAACGTCATCCTACATGGCAAAGTTTCTTCCCTGGGGGCTGCTCCAGAGCTaGGTACTCCTGGCCAACATG +
Preference number: 4 (lower is better)
Translates to: QKASLATTSSYMAKFLPWGLLQS*VLLANM
Trigger: CATGTTGGCCAGGAGTACCCAGCTCTGGAGCAGCCC...CCAGGGAAGAAACTTTGCCATGTAGGATGACGTTGTGGCTAAGCTAGCTTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp CAGGAAAGACCAAGCCTAAAGAGATCTCATGTCCCATGGGTTAGCTATAGTGACGCTGAAGGGGGACTCTaGGGCTGCAGTGGGATTACG +
Preference number: 4 (lower is better)
Translates to: QERPSLKRSHVPWVSYSDAEGGL*GCSGIT
Trigger: CGTAATCCCACTGCAGCCTCAGAGTCCCCCTTCAGC...GTCACTATAGCTAACCCATGGGACATGAGATCTCTTTAGGCTTGGTCTTTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp TTTCTTGTGGGCTGTCCTTTGATTTATAAGGAACCTCTGGGAGAAGGCTGCAGGCTGTTGGCTGCTGCATaGAGACTGACCACCAGGGCT +
Preference number: 4 (lower is better)
Translates to: FLVGCPLIYKEPLGEGCRLLAAA*RLTTRA
Trigger: AGCCCTGGTGGTCAGTCTTCATGCAGCAGCCAACAG...CCTGCAGCCTTCTCCCAGAGGTTCCTTATAAATCAAAGGACAGCCCACAAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp CAGGAAAGACCAAGCCTAAAGAGATCTCATGTCCCATGGGTTAGCTATAGTGACAGATGCCCGAGGATCTaGGGCTGCTCAGGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: QERPSLKRSHVPWVSYSDRCPRI*GCSGRQ
Trigger: CTGCCTACCTGAGCAGCCGCAGATCCTCGGGCATCT...GTCACTATAGCTAACCCATGGGACATGAGATCTCTTTAGGCTTGGTCTTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp CAGAAAGCTAGCTTAGCCACAACGTCATCCTACATGGCAAAGTTTCTTCCCTGGTTAAGGCGGTACTGCTaGACGGGTGTGAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: QKASLATTSSYMAKFLPWLRRYC*TGVRLS
Trigger: GCTCAGCCTCACACCCGTGCAGCAGTACCGCCTTAA...CCAGGGAAGAAACTTTGCCATGTAGGATGACGTTGTGGCTAAGCTAGCTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp CAGAAAGCTAGCTTAGCCACAACGTCATCCTACATGGCAAAGTTTCTTCCCTGGCTGGAAGTCAGTGGCTaGCTGTTGAGCTGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: QKASLATTSSYMAKFLPWLEVSG*LLSWLP
Trigger: TGGGAGCCAGCTCAACAGGCAGCCACTGACTTCCAG...CCAGGGAAGAAACTTTGCCATGTAGGATGACGTTGTGGCTAAGCTAGCTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp CAGGAAAGACCAAGCCTAAAGAGATCTCATGTCCCATGGGTTAGCTATAGTGACCCCCTGCACCAGCAGTaGCAGCTGAGGGAAGGATGT +
Preference number: 4 (lower is better)
Translates to: QERPSLKRSHVPWVSYSDPLHQQ*QLREGC
Trigger: ACATCCTTCCCTCAGCTGCCACTGCTGGTGCAGGGG...GTCACTATAGCTAACCCATGGGACATGAGATCTCTTTAGGCTTGGTCTTTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp TTTCTTGTGGGCTGTCCTTTGATTTATAAGGAACCTCTGGGAGAAGGCTGCAGGCTGCCGGGTTTCTCCTaGCTTGCAAAGCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: FLVGCPLIYKEPLGEGCRLPGFS*LAKQGL
Trigger: CAGCCCTTGCTTTGCAAGCCAGGAGAAACCCGGCAG...CCTGCAGCCTTCTCCCAGAGGTTCCTTATAAATCAAAGGACAGCCCACAAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp CAGGAAAGACCAAGCCTAAAGAGATCTCATGTCCCATGGGTTAGCTATAGTGACGGCTGCCTGTTGAGCTaGCTCCCATACTGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: QERPSLKRSHVPWVSYSDGCLLS*LPYCWV
Trigger: GACCCAGCAGTATGGGAGCCAGCTCAACAGGCAGCC...GTCACTATAGCTAACCCATGGGACATGAGATCTCTTTAGGCTTGGTCTTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp CAGGAAAGACCAAGCCTAAAGAGATCTCATGTCCCATGGGTTAGCTATAGTGACCCACCAGGGCTTGGCTaGGATGTCATGGGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: QERPSLKRSHVPWVSYSDPPGLG*DVMGFS
Trigger: TGAGAAGCCCATGACATCTCAGCCAAGCCCTGGTGG...GTCACTATAGCTAACCCATGGGACATGAGATCTCTTTAGGCTTGGTCTTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp CAGAAAGCTAGCTTAGCCACAACGTCATCCTACATGGCAAAGTTTCTTCCCTGGTGCTTGATGGCTGGCTaGTGTTGTCCTGAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: QKASLATTSSYMAKFLPWCLMAG*CCPESL
Trigger: CAGGGACTCAGGACAACAGCAGCCAGCCATCAAGCA...CCAGGGAAGAAACTTTGCCATGTAGGATGACGTTGTGGCTAAGCTAGCTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACTCCGGCTGTTCCTGCTaGCCCCGTGACCCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: QFILHICRIYKRNLSEENSGCSC*PRDPGL
Trigger: CAGCCCAGGGTCACGGGGCCAGCAGGAACAGCCGGA...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp CAGAAAGCTAGCTTAGCCACAACGTCATCCTACATGGCAAAGTTTCTTCCCTGGTGTGCTCCATCCATTTaGTCCCTGCCGGGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: QKASLATTSSYMAKFLPWCAPSI*SLPGFS
Trigger: GGAGAAACCCGGCAGGGACCAAATGGATGGAGCACA...CCAGGGAAGAAACTTTGCCATGTAGGATGACGTTGTGGCTAAGCTAGCTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACGGGCAGAGGTGTGGGTaGTGGGCCACCTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: QFILHICRIYKRNLSEENGQRCG*WATCGS
Trigger: GCTGCCACAGGTGGCCCACCACCCACACCTCTGCCC...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp TTTCTTGTGGGCTGTCCTTTGATTTATAAGGAACCTCTGGGAGAAGGCTGCAGGCTTGGAGCAGGCAGTTaGCATCTGAGAGGGAGAACG +
Preference number: 4 (lower is better)
Translates to: FLVGCPLIYKEPLGEGCRLGAGS*HLRGRT
Trigger: CGTTCTCCCTCTCAGATGCCAACTGCCTGCTCCAAG...CCTGCAGCCTTCTCCCAGAGGTTCCTTATAAATCAAAGGACAGCCCACAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp CAGGAAAGACCAAGCCTAAAGAGATCTCATGTCCCATGGGTTAGCTATAGTGACTGTCCGCTTCCTCCTTaGCTAGGGTTGTTCCTTCCG +
Preference number: 4 (lower is better)
Translates to: QERPSLKRSHVPWVSYSDCPLPP*LGLFLP
Trigger: CGGAAGGAACAACCCTAGTCAAGGAGGAAGCGGACA...GTCACTATAGCTAACCCATGGGACATGAGATCTCTTTAGGCTTGGTCTTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp TTTCTTGTGGGCTGTCCTTTGATTTATAAGGAACCTCTGGGAGAAGGCTGCAGGTGCTTCTTGGTAACATaGGCCTCAGGGCCATGCACA +
Preference number: 4 (lower is better)
Translates to: FLVGCPLIYKEPLGEGCRCFLVT*ASGPCT
Trigger: TGTGCATGGCCCTGAGGCTCATGTTACCAAGAAGCA...CCTGCAGCCTTCTCCCAGAGGTTCCTTATAAATCAAAGGACAGCCCACAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp TTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACACCCTCCTAAGGGGACCTGGACTGTaGATGGCTGCCGGAATCTCT +
Preference number: 4 (lower is better)
Translates to: LHICRIYKRNLSEENTLLRGPGL*MAAGIS
Trigger: AGAGATTCCGGCAGCCATTCACAGTCCAGGTCCCCT...TAGGAGGGTGTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp CAGAAAGCTAGCTTAGCCACAACGTCATCCTACATGGCAAAGTTTCTTCCCTGGTTCACCCTGCTGCTCTaGCTCATGTCACTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: QKASLATTSSYMAKFLPWFTLLL*LMSLSC
Trigger: ACAGCTCAGTGACATGAGTCAGAGCAGCAGGGTGAA...CCAGGGAAGAAACTTTGCCATGTAGGATGACGTTGTGGCTAAGCTAGCTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp TTTCTTGTGGGCTGTCCTTTGATTTATAAGGAACCTCTGGGAGAAGGCTGCAGGCTTGTGCCTCCATTTTaGTGCTGTTCACCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FLVGCPLIYKEPLGEGCRLVPPF*CCSPCC
Trigger: GCAGCAGGGTGAACAGCATCAAAATGGAGGCACAAG...CCTGCAGCCTTCTCCCAGAGGTTCCTTATAAATCAAAGGACAGCCCACAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATCCTTCCGGCTGTTCCTaGTGGCCCCGTGACCCTGGG +
Preference number: 4 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNPSGCS*WPRDPG
Trigger: CCCAGGGTCACGGGGCCAGCAGGAACAGCCGGAAGG...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp TTTCTTGTGGGCTGTCCTTTGATTTATAAGGAACCTCTGGGAGAAGGCTGCAGGACATGTACTGGGCTTTaGACGGTTTCTGCTCTCGTG +
Preference number: 4 (lower is better)
Translates to: FLVGCPLIYKEPLGEGCRTCTGL*TVSALV
Trigger: CACGAGAGCAGAAACCGTTCAAAGCCCAGTACATGT...CCTGCAGCCTTCTCCCAGAGGTTCCTTATAAATCAAAGGACAGCCCACAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp TTTCTTGTGGGCTGTCCTTTGATTTATAAGGAACCTCTGGGAGAAGGCTGCAGGTTTCATCGATGGCACTaGGGTCTGCTACACTACCTC +
Preference number: 4 (lower is better)
Translates to: FLVGCPLIYKEPLGEGCRFHRWH*GLLHYL
Trigger: GAGGTAGTGTAGCAGACCTCAGTGCCATCGATGAAA...CCTGCAGCCTTCTCCCAGAGGTTCCTTATAAATCAAAGGACAGCCCACAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACTTCTCCCCGAGGGTCTaGTATCCCCCAGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: QFILHICRIYKRNLSEENFSPRV*YPPAGP
Trigger: TGGCCCAGCTGGGGGATATCAGACCCTCGGGGAGAA...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp TTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACACCCTCCTAGATAGCTGCCATGCTTaGTGGCTGGCTGCTGTTGTC +
Preference number: 4 (lower is better)
Translates to: LHICRIYKRNLSEENTLLDSCHA*WLAAVV
Trigger: GACAACAGCAGCCAGCCATCAAGCATGGCAGCTATC...TAGGAGGGTGTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp CAGGAAAGACCAAGCCTAAAGAGATCTCATGTCCCATGGGTTAGCTATAGTGACTCAGAGATGCCACTCTaGAACTGCTGCCCATACCCT +
Preference number: 4 (lower is better)
Translates to: QERPSLKRSHVPWVSYSDSEMPL*NCCPYP
Trigger: AGGGTATGGGCAGCAGTTGCAGAGTGGCATCTCTGA...GTCACTATAGCTAACCCATGGGACATGAGATCTCTTTAGGCTTGGTCTTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp TTTCTTGTGGGCTGTCCTTTGATTTATAAGGAACCTCTGGGAGAAGGCTGCAGGGCAAATCAGTTTTACTaGCCTCAGAGCAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: FLVGCPLIYKEPLGEGCRANQFY*PQSRAA
Trigger: AGCAGCCCTGCTCTGAGGGCAGTAAAACTGATTTGC...CCTGCAGCCTTCTCCCAGAGGTTCCTTATAAATCAAAGGACAGCCCACAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp AGTGACCAAATGATCATTCTTGAACTGGACTATCAGGACAGATTGGTGAAATCTCCCGTGACCCTGGGCTaGGGAGGTCTTCATCAGGCT +
Preference number: 4 (lower is better)
Translates to: SDQMIILELDYQDRLVKSPVTLG*GGLHQA
Trigger: AGCCTGATGAAGACCTCCCCAGCCCAGGGTCACGGG...AGATTTCACCAATCTGTCCTGATAGTCCAGTTCAAGAATGATCATTTGGTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp AGTGACCAAATGATCATTCTTGAACTGGACTATCAGGACAGATTGGTGAAATCTGGAATCTCTCGGGGGTaGAGGCCGAGGGTGCATGTC +
Preference number: 4 (lower is better)
Translates to: SDQMIILELDYQDRLVKSGISRG*RPRVHV
Trigger: GACATGCACCCTCGGCCTCCACCCCCGAGAGATTCC...AGATTTCACCAATCTGTCCTGATAGTCCAGTTCAAGAATGATCATTTGGTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp GGCTGCTTAAATACCTACTTAGAGCTATGTATAGTCAATTCAATTCTCAGTTACGCCGGCCAGGGGACCTaGACTGTGAATGGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: GCLNTYLELCIVNSILSYAGQGT*TVNGCR
Trigger: CCGGCAGCCATTCACAGTCCAGGTCCCCTGGCCGGC...GTAACTGAGAATTGAATTGACTATACATAGCTCTAAGTAGGTATTTAAGCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp TTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACACCCTCCTAGCAAAGCAAGGGCTGTaGTTGCCGTGGAAATGGTCG +
Preference number: 4 (lower is better)
Translates to: LHICRIYKRNLSEENTLLAKQGL*LPWKWS
Trigger: CGACCATTTCCACGGCAACCACAGCCCTTGCTTTGC...TAGGAGGGTGTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATCCTGGGACGCCTCGCTaGACCTGCGGCTGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNPGTPR*TCGWKS
Trigger: GCTTTTCCAGCCGCAGGTCCAGCGAGGCGTCCCAGG...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp CAGAAAGCTAGCTTAGCCACAACGTCATCCTACATGGCAAAGTTTCTTCCCTGGAAATGGTCGAGTCCATaGTTGGGGTTTCATCGATGG +
Preference number: 4 (lower is better)
Translates to: QKASLATTSSYMAKFLPWKWSSP*LGFHRW
Trigger: CCATCGATGAAACCCCAATCATGGACTCGACCATTT...CCAGGGAAGAAACTTTGCCATGTAGGATGACGTTGTGGCTAAGCTAGCTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp CAGGAAAGACCAAGCCTAAAGAGATCTCATGTCCCATGGGTTAGCTATAGTGACTTGAACCCTGGCAAGTaGCATGTTCTCCGAGACTGT +
Preference number: 4 (lower is better)
Translates to: QERPSLKRSHVPWVSYSDLNPGK*HVLRDC
Trigger: ACAGTCTCGGAGAACATGTCACTTGCCAGGGTTCAA...GTCACTATAGCTAACCCATGGGACATGAGATCTCTTTAGGCTTGGTCTTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp TTTCTTGTGGGCTGTCCTTTGATTTATAAGGAACCTCTGGGAGAAGGCTGCAGGAGGCTGCATAGTGATTaGGTTTCTTCTCTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: FLVGCPLIYKEPLGEGCRRLHSD*VSSLSV
Trigger: CACCGAGAGAGAAGAAACGCAATCACTATGCAGCCT...CCTGCAGCCTTCTCCCAGAGGTTCCTTATAAATCAAAGGACAGCCCACAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp TTTCTTGTGGGCTGTCCTTTGATTTATAAGGAACCTCTGGGAGAAGGCTGCAGGTTGGACCGCTTATTATaGATAGGGTCACCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: FLVGCPLIYKEPLGEGCRLDRLL*IGSPVL
Trigger: CAGCACTGGTGACCCTATGCATAATAAGCGGTCCAA...CCTGCAGCCTTCTCCCAGAGGTTCCTTATAAATCAAAGGACAGCCCACAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp CAGAAAGCTAGCTTAGCCACAACGTCATCCTACATGGCAAAGTTTCTTCCCTGGCTTCAGGCTCCTGCTTaGTTTCATCTTTGTCCGCTT +
Preference number: 4 (lower is better)
Translates to: QKASLATTSSYMAKFLPWLQAPA*FHLCPL
Trigger: AAGCGGACAAAGATGAAAGCAAGCAGGAGCCTGAAG...CCAGGGAAGAAACTTTGCCATGTAGGATGACGTTGTGGCTAAGCTAGCTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp TTTCTTGTGGGCTGTCCTTTGATTTATAAGGAACCTCTGGGAGAAGGCTGCAGGCTGTGTAACGCTTGGTaGAGCCAGGGATTTTGCATA +
Preference number: 4 (lower is better)
Translates to: FLVGCPLIYKEPLGEGCRLCNAW*SQGFCI
Trigger: TATGCAAAATCCCTGGCTGCACCAAGCGTTACACAG...CCTGCAGCCTTCTCCCAGAGGTTCCTTATAAATCAAAGGACAGCCCACAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp CAGAAAGCTAGCTTAGCCACAACGTCATCCTACATGGCAAAGTTTCTTCCCTGGATGTCTGGCATCAATTaGTACAGGAGGATGGAAGGC +
Preference number: 4 (lower is better)
Translates to: QKASLATTSSYMAKFLPWMSGIN*YRRMEG
Trigger: GCCTTCCATCCTCCTGTACCAATTGATGCCAGACAT...CCAGGGAAGAAACTTTGCCATGTAGGATGACGTTGTGGCTAAGCTAGCTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACGGGCTGACTCCAGCATaGGGAGCATCTGTAGGGCTC +
Preference number: 4 (lower is better)
Translates to: QFILHICRIYKRNLSEENGLTPA*GASVGL
Trigger: GAGCCCTACAGATGCTCCCCATGCTGGAGTCAGCCC...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACGGGCCAGAGCTGACCTaGACGGGGTTCAGAACTGTC +
Preference number: 4 (lower is better)
Translates to: QFILHICRIYKRNLSEENGPELT*TGFRTV
Trigger: GACAGTTCTGAACCCCGTCCAGGTCAGCTCTGGCCC...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp TTTCTTGTGGGCTGTCCTTTGATTTATAAGGAACCTCTGGGAGAAGGCTGCAGGTCCTTGAAGCATCTGTaGAGATGGGATCGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: FLVGCPLIYKEPLGEGCRSLKHL*RWDRRS
Trigger: ACTCCTACGATCCCATCTCCACAGATGCTTCAAGGA...CCTGCAGCCTTCTCCCAGAGGTTCCTTATAAATCAAAGGACAGCCCACAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp AGTGACCAAATGATCATTCTTGAACTGGACTATCAGGACAGATTGGTGAAATCTCTCAGCCTCTCCATGTaGGGCAGAGGTGTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: SDQMIILELDYQDRLVKSLSLSM*GRGVGG
Trigger: ACCACCCACACCTCTGCCCCACATGGAGAGGCTGAG...AGATTTCACCAATCTGTCCTGATAGTCCAGTTCAAGAATGATCATTTGGTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp TTTCTTGTGGGCTGTCCTTTGATTTATAAGGAACCTCTGGGAGAAGGCTGCAGGGACCACACTTCAGCTTaGAGGATGACAGATCAGAAG +
Preference number: 4 (lower is better)
Translates to: FLVGCPLIYKEPLGEGCRDHTSA*RMTDQK
Trigger: CTTCTGATCTGTCATCCTCCAAGCTGAAGTGTGGTC...CCTGCAGCCTTCTCCCAGAGGTTCCTTATAAATCAAAGGACAGCCCACAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATTTGGAGCAGGGTGGATaGGAGGAGGGCTGTGTCCGA +
Preference number: 4 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNLEQGG*EEGCVR
Trigger: TCGGACACAGCCCTCCTCTCATCCACCCTGCTCCAA...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp AGTGACCAAATGATCATTCTTGAACTGGACTATCAGGACAGATTGGTGAAATCTTGTGGGCTTGCTCTGTaGGGACTCAGAAGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: SDQMIILELDYQDRLVKSCGLAL*GLRRAR
Trigger: TCTGGCCCTTCTGAGTCCTCACAGAGCAAGCCCACA...AGATTTCACCAATCTGTCCTGATAGTCCAGTTCAAGAATGATCATTTGGTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACTGGGCTTCTCAGCCTTaGCAGTCTTCACCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: QFILHICRIYKRNLSEENWASQP*QSSPGG
Trigger: GCCTCCAGGTGAAGACTGTCAAGGCTGAGAAGCCCA...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATGGGCAACATTCTCTGTaGTGCTGGGAGGGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNGQHSL*CWEGKG
Trigger: CCCCTTGCCCTCCCAGCATCACAGAGAATGTTGCCC...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp CAGGAAAGACCAAGCCTAAAGAGATCTCATGTCCCATGGGTTAGCTATAGTGACTATCCCTGTCCCATTTaGTCTTGGGTTTGCATGCCA +
Preference number: 4 (lower is better)
Translates to: QERPSLKRSHVPWVSYSDYPCPI*SWVCMP
Trigger: TGGCATGCAAACCCAAGATCAAATGGGACAGGGATA...GTCACTATAGCTAACCCATGGGACATGAGATCTCTTTAGGCTTGGTCTTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp AGTGACCAAATGATCATTCTTGAACTGGACTATCAGGACAGATTGGTGAAATCTTGGACTGTGAATGGCTaGCGGAATCTCTCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: SDQMIILELDYQDRLVKSWTVNG*RNLSGV
Trigger: CACCCCCGAGAGATTCCGGCAGCCATTCACAGTCCA...AGATTTCACCAATCTGTCCTGATAGTCCAGTTCAAGAATGATCATTTGGTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp TTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACACCCTCCTAATCCCCACTGTGGATTaGAAAGTGCTCTGGGCCATT +
Preference number: 4 (lower is better)
Translates to: LHICRIYKRNLSEENTLLIPTVD*KVLWAI
Trigger: AATGGCCCAGAGCACTTTGCAATCCACAGTGGGGAT...TAGGAGGGTGTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp TTTCTTGTGGGCTGTCCTTTGATTTATAAGGAACCTCTGGGAGAAGGCTGCAGGAAACCCCCATTCTCTTaGAAGCTGTTGCCTTTTAGC +
Preference number: 4 (lower is better)
Translates to: FLVGCPLIYKEPLGEGCRKPPFS*KLLPFS
Trigger: GCTAAAAGGCAACAGCTTGCAAGAGAATGGGGGTTT...CCTGCAGCCTTCTCCCAGAGGTTCCTTATAAATCAAAGGACAGCCCACAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp TTTCTTGTGGGCTGTCCTTTGATTTATAAGGAACCTCTGGGAGAAGGCTGCAGGGAACTTGCTTTCTTCTaGAAGGGAGGTCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: FLVGCPLIYKEPLGEGCRELAFF*KGGQQR
Trigger: TCTTTGCTGACCTCCCTTGCAGAAGAAAGCAAGTTC...CCTGCAGCCTTCTCCCAGAGGTTCCTTATAAATCAAAGGACAGCCCACAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp TTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACACCCTCCTAGGCCCTCATGATGTCTaGCATCAATTGGTACAGGAG +
Preference number: 4 (lower is better)
Translates to: LHICRIYKRNLSEENTLLGPHDV*HQLVQE
Trigger: CTCCTGTACCAATTGATGCCAGACATCATGAGGGCC...TAGGAGGGTGTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp TTTCTTGTGGGCTGTCCTTTGATTTATAAGGAACCTCTGGGAGAAGGCTGCAGGTGGAGGAATAGGAGATaGATCATAATGGTAACGGCC +
Preference number: 4 (lower is better)
Translates to: FLVGCPLIYKEPLGEGCRWRNRR*IIMVTA
Trigger: GGCCGTTACCATTATGATCCATCTCCTATTCCTCCA...CCTGCAGCCTTCTCCCAGAGGTTCCTTATAAATCAAAGGACAGCCCACAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATAAATGCTCCCTGAGTTaGCCGGCCAGGGGACCTGGA +
Preference number: 4 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNKCSLS*PARGPG
Trigger: TCCAGGTCCCCTGGCCGGCCAACTCAGGGAGCATTT...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACCATCTTCGAGGAGGATaGACTGGAGGCAGGGTCACC +
Preference number: 4 (lower is better)
Translates to: QFILHICRIYKRNLSEENHLRGG*TGGRVT
Trigger: GGTGACCCTGCCTCCAGTCCATCCTCCTCGAAGATG...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp CAGGAAAGACCAAGCCTAAAGAGATCTCATGTCCCATGGGTTAGCTATAGTGACGATTGCAAAGTGCTCTaGGCCATTGTAGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: QERPSLKRSHVPWVSYSDDCKVL*AIVGTA
Trigger: AGCAGTACCTACAATGGCCCAGAGCACTTTGCAATC...GTCACTATAGCTAACCCATGGGACATGAGATCTCTTTAGGCTTGGTCTTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp TTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACACCCTCCTACCCCTGACATTAGGCTaGTATGGTCCCCATCATCTA +
Preference number: 4 (lower is better)
Translates to: LHICRIYKRNLSEENTLLPLTLG*YGPHHL
Trigger: TAGATGATGGGGACCATACCAGCCTAATGTCAGGGG...TAGGAGGGTGTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR CAA 72 bp GGCAATGGGTGTGACCAGAAACCAAGCTCATTCTTCTaGCTGAGGAAGGAAGAATTCCTGAACCCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: GNGCDQKPSSFF*LRKEEFLNPFF
Trigger: AAAGAAGGGGTTCAGGAATTCTTCCTTCCTCAGCAAGAAGAATGAGCTTGGTTTCTGGTCACACCCATTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACAGACCCTGCACACTCTaGGGCTGCATAGTGATTGCG +
Preference number: 4 (lower is better)
Translates to: QFILHICRIYKRNLSEENRPCTL*GCIVIA
Trigger: CGCAATCACTATGCAGCCTCAGAGTGTGCAGGGTCT...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATAGTATTCCGCAGGGCTaGCTCCAGCATGGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNSIPQG*LQHGEH
Trigger: ATGCTCCCCATGCTGGAGTCAGCCCTGCGGAATACT...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp AGTGACCAAATGATCATTCTTGAACTGGACTATCAGGACAGATTGGTGAAATCTACCAGCAGTGGCAGCTaGGGGAAGGATGTCTGCATA +
Preference number: 4 (lower is better)
Translates to: SDQMIILELDYQDRLVKSTSSGS*GKDVCI
Trigger: TATGCAGACATCCTTCCCTCAGCTGCCACTGCTGGT...AGATTTCACCAATCTGTCCTGATAGTCCAGTTCAAGAATGATCATTTGGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp CAGGAAAGACCAAGCCTAAAGAGATCTCATGTCCCATGGGTTAGCTATAGTGACGGTCTTCATCAGGCTTaGTCTTGGACCGCTTATTAT +
Preference number: 4 (lower is better)
Translates to: QERPSLKRSHVPWVSYSDGLHQA*SWTAYY
Trigger: ATAATAAGCGGTCCAAGATCAAGCCTGATGAAGACC...GTCACTATAGCTAACCCATGGGACATGAGATCTCTTTAGGCTTGGTCTTTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATTACTCCTGGCCAACATaGCTGTCTGGCAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNYSWPT*LSGSPA
Trigger: AGCAGGGCTGCCAGACAGTCATGTTGGCCAGGAGTA...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATTCAGTGGCTGCCTGTTaGGCTGGCTCCCATACTGCT +
Preference number: 4 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNSVAAC*AGSHTA
Trigger: AGCAGTATGGGAGCCAGCTCAACAGGCAGCCACTGA...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp TTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACACCCTCCTAATAGATGTTGATATGTaGGGTAGCACCAACCTGCCC +
Preference number: 4 (lower is better)
Translates to: LHICRIYKRNLSEENTLLIDVDM*GSTNLP
Trigger: GGGCAGGTTGGTGCTACCTCACATATCAACATCTAT...TAGGAGGGTGTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp GGCTGCTTAAATACCTACTTAGAGCTATGTATAGTCAATTCAATTCTCAGTTACTGGCTGCTGTTGTCCTaGGTCCCTGGTAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GCLNTYLELCIVNSILSYWLLLS*VPGRQL
Trigger: GAGCTGCCTACCAGGGACTCAGGACAACAGCAGCCA...GTAACTGAGAATTGAATTGACTATACATAGCTCTAAGTAGGTATTTAAGCAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp GGCTGCTTAAATACCTACTTAGAGCTATGTATAGTCAATTCAATTCTCAGTTACCAGGCAGTTGGCATCTaGGAGGGAGAACGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GCLNTYLELCIVNSILSYQAVGI*EGERAS
Trigger: GCTGGCTCGTTCTCCCTCTCAGATGCCAACTGCCTG...GTAACTGAGAATTGAATTGACTATACATAGCTCTAAGTAGGTATTTAAGCAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp CAGGAAAGACCAAGCCTAAAGAGATCTCATGTCCCATGGGTTAGCTATAGTGACATGACTTCAGGCTCCTaGTTGCTTTCATCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: QERPSLKRSHVPWVSYSDMTSGS*LLSSLS
Trigger: GGACAAAGATGAAAGCAAGCAGGAGCCTGAAGTCAT...GTCACTATAGCTAACCCATGGGACATGAGATCTCTTTAGGCTTGGTCTTTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp CAGAAAGCTAGCTTAGCCACAACGTCATCCTACATGGCAAAGTTTCTTCCCTGGTGCAGCCAGGGATTTTaGATACATACGGTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: QKASLATTSSYMAKFLPWCSQGF*IHTVSH
Trigger: ATGAGAAACCGTATGTATGCAAAATCCCTGGCTGCA...CCAGGGAAGAAACTTTGCCATGTAGGATGACGTTGTGGCTAAGCTAGCTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATCTTCTGCTCACCAAATaGTCCCTGAGTTGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNLLLTK*SLSWPA
Trigger: GGCCGGCCAACTCAGGGAGCATTTGGTGAGCAGAAG...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp AGTGACCAAATGATCATTCTTGAACTGGACTATCAGGACAGATTGGTGAAATCTGGGACTGTTGGCTGCTaGATGAAGACTGACCACCAG +
Preference number: 4 (lower is better)
Translates to: SDQMIILELDYQDRLVKSGTVGC*MKTDHQ
Trigger: CTGGTGGTCAGTCTTCATGCAGCAGCCAACAGTCCC...AGATTTCACCAATCTGTCCTGATAGTCCAGTTCAAGAATGATCATTTGGTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp TTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACACCCTCCTAGATCTTGGGTTTGCATaGCATTCACTGTGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: LHICRIYKRNLSEENTLLDLGFA*HSLCCQ
Trigger: CTGGCAACACAGTGAATGGCATGCAAACCCAAGATC...TAGGAGGGTGTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp GGCTGCTTAAATACCTACTTAGAGCTATGTATAGTCAATTCAATTCTCAGTTACCTGGGCCCCTGGTGTTaGATGCTGCCACTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: GCLNTYLELCIVNSILSYLGPWC*MLPLSS
Trigger: GCTACTCAGTGGCAGCATGCAACACCAGGGGCCCAG...GTAACTGAGAATTGAATTGACTATACATAGCTCTAAGTAGGTATTTAAGCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp AGTGACCAAATGATCATTCTTGAACTGGACTATCAGGACAGATTGGTGAAATCTCATTCCGGGGATCCATaGCAAACACAGTCCCACGGT +
Preference number: 4 (lower is better)
Translates to: SDQMIILELDYQDRLVKSHSGDP*QTQSHG
Trigger: ACCGTGGGACTGTGTTTGCCATGGATCCCCGGAATG...AGATTTCACCAATCTGTCCTGATAGTCCAGTTCAAGAATGATCATTTGGTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp AGTGACCAAATGATCATTCTTGAACTGGACTATCAGGACAGATTGGTGAAATCTCTGACCACCAGGGCTTaGCTGAGATGTCATGGGCTT +
Preference number: 4 (lower is better)
Translates to: SDQMIILELDYQDRLVKSLTTRA*LRCHGL
Trigger: AAGCCCATGACATCTCAGCCAAGCCCTGGTGGTCAG...AGATTTCACCAATCTGTCCTGATAGTCCAGTTCAAGAATGATCATTTGGTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp CAGGAAAGACCAAGCCTAAAGAGATCTCATGTCCCATGGGTTAGCTATAGTGACCTGACCTCGTTCCACTaGATGGGCAAATCAGTTTTA +
Preference number: 4 (lower is better)
Translates to: QERPSLKRSHVPWVSYSDLTSFH*MGKSVL
Trigger: TAAAACTGATTTGCCCATCCAGTGGAACGAGGTCAG...GTCACTATAGCTAACCCATGGGACATGAGATCTCTTTAGGCTTGGTCTTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACAGCACTGGAAGTCAGTaGCTGCCTGTTGAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: QFILHICRIYKRNLSEENSTGSQ*LPVELA
Trigger: AGCCAGCTCAACAGGCAGCCACTGACTTCCAGTGCT...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp GGCTGCTTAAATACCTACTTAGAGCTATGTATAGTCAATTCAATTCTCAGTTACTGTTACCCCCATAGCTaGCACAGGGCTGGTAGCCCC +
Preference number: 4 (lower is better)
Translates to: GCLNTYLELCIVNSILSYCYPHS*HRAGSP
Trigger: GGGGCTACCAGCCCTGTGCCAGCTATGGGGGTAACA...GTAACTGAGAATTGAATTGACTATACATAGCTCTAAGTAGGTATTTAAGCAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATGCACTCTTCCCGCTTTaGGGTAGTGTTGCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNALFPL*GSVAQL
Trigger: GAGCTGAGCAACACTACCTCAAAGCGGGAAGAGTGC...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp AGTGACCAAATGATCATTCTTGAACTGGACTATCAGGACAGATTGGTGAAATCTTGTTGGAATAGTTGCTaGTGGGGGACTGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SDQMIILELDYQDRLVKSCWNSC*WGTVGC
Trigger: GCAGCCAACAGTCCCCCATCAGCAACTATTCCAACA...AGATTTCACCAATCTGTCCTGATAGTCCAGTTCAAGAATGATCATTTGGTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp CAGGAAAGACCAAGCCTAAAGAGATCTCATGTCCCATGGGTTAGCTATAGTGACTTAGCCTTTCAAGTTTaGTGTGCTCCATCCATTTGG +
Preference number: 4 (lower is better)
Translates to: QERPSLKRSHVPWVSYSDLAFQV*CAPSIW
Trigger: CCAAATGGATGGAGCACATCAAACTTGAAAGGCTAA...GTCACTATAGCTAACCCATGGGACATGAGATCTCTTTAGGCTTGGTCTTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp GGCTGCTTAAATACCTACTTAGAGCTATGTATAGTCAATTCAATTCTCAGTTACCGCCCTCTGTATGTGTaGCCTCCCCCATCACTGCAT +
Preference number: 4 (lower is better)
Translates to: GCLNTYLELCIVNSILSYRPLYV*PPPSLH
Trigger: ATGCAGTGATGGGGGAGGTCACACATACAGAGGGCG...GTAACTGAGAATTGAATTGACTATACATAGCTCTAAGTAGGTATTTAAGCAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACGCTTTCCTGTCTTGCTaGCTGAAGCCCATGGTTTGG +
Preference number: 4 (lower is better)
Translates to: QFILHICRIYKRNLSEENAFLSC*LKPMVW
Trigger: CCAAACCATGGGCTTCAGTCAGCAAGACAGGAAAGC...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp GGCTGCTTAAATACCTACTTAGAGCTATGTATAGTCAATTCAATTCTCAGTTACTGTCTGCATAAGGGCTaGGCTGGCCTGTCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: GCLNTYLELCIVNSILSYCLHKG*AGLSAE
Trigger: CTCTGCTGACAGGCCAGCGCAGCCCTTATGCAGACA...GTAACTGAGAATTGAATTGACTATACATAGCTCTAAGTAGGTATTTAAGCAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp AGTGACCAAATGATCATTCTTGAACTGGACTATCAGGACAGATTGGTGAAATCTGCGGAGCCTAAGCTTTaGTGTCGGCTTAGGATCTGT +
Preference number: 4 (lower is better)
Translates to: SDQMIILELDYQDRLVKSAEPKL*CRLRIC
Trigger: ACAGATCCTAAGCCGACAGCAAAGCTTAGGCTCCGC...AGATTTCACCAATCTGTCCTGATAGTCCAGTTCAAGAATGATCATTTGGTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATTGGGGGACTGTTGGCTaGTGCATGAAGACTGACCAC +
Preference number: 4 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNWGTVG*CMKTDH
Trigger: GTGGTCAGTCTTCATGCAGCAGCCAACAGTCCCCCA...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATAGCAAGGGCTGTGGTTaGCGTGGAAATGGTCGAGTC +
Preference number: 4 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNSKGCG*RGNGRV
Trigger: GACTCGACCATTTCCACGGCAACCACAGCCCTTGCT...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp CAGGAAAGACCAAGCCTAAAGAGATCTCATGTCCCATGGGTTAGCTATAGTGACCTTTCAAGTTTGATGTaGTCCATCCATTTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: QERPSLKRSHVPWVSYSDLSSLM*SIHLVP
Trigger: AGGGACCAAATGGATGGAGCACATCAAACTTGAAAG...GTCACTATAGCTAACCCATGGGACATGAGATCTCTTTAGGCTTGGTCTTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp GGCTGCTTAAATACCTACTTAGAGCTATGTATAGTCAATTCAATTCTCAGTTACGCCACCTGTGGCAGCTaGATACTTGGCCTTAAGGCG +
Preference number: 4 (lower is better)
Translates to: GCLNTYLELCIVNSILSYATCGS*ILGLKA
Trigger: CGCCTTAAGGCCAAGTATGCAGCTGCCACAGGTGGC...GTAACTGAGAATTGAATTGACTATACATAGCTCTAAGTAGGTATTTAAGCAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp TTTCTTGTGGGCTGTCCTTTGATTTATAAGGAACCTCTGGGAGAAGGCTGCAGGTGGGACATTTCCCAATaGAATTTTCAGCTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: FLVGCPLIYKEPLGEGCRWDISQ*NFQLSS
Trigger: GGAAGAAAGCTGAAAATTCCATTGGGAAATGTCCCA...CCTGCAGCCTTCTCCCAGAGGTTCCTTATAAATCAAAGGACAGCCCACAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp TTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACACCCTCCTAACTACCAACATGTACTaGGCTTTGAACGGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: LHICRIYKRNLSEENTLLTTNMY*ALNGFC
Trigger: GCAGAAACCGTTCAAAGCCCAGTACATGTTGGTAGT...TAGGAGGGTGTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACTGTTGGTGGTGCCCATaGATAGGGATGGGAATGGGA +
Preference number: 4 (lower is better)
Translates to: QFILHICRIYKRNLSEENCWWCP*IGMGMG
Trigger: TCCCATTCCCATCCCTATCCATGGGCACCACCAACA...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp AGTGACCAAATGATCATTCTTGAACTGGACTATCAGGACAGATTGGTGAAATCTAGTTTGTCTCGTAGATaGCTTCAGGCTCCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: SDQMIILELDYQDRLVKSSLSRR*LQAPAC
Trigger: GCAAGCAGGAGCCTGAAGTCATCTACGAGACAAACT...AGATTTCACCAATCTGTCCTGATAGTCCAGTTCAAGAATGATCATTTGGTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACGTGCTTGGCCCGATCTaGAGCATTAGAGAAAGCCTT +
Preference number: 4 (lower is better)
Translates to: QFILHICRIYKRNLSEENVLGPI*SIRESL
Trigger: AAGGCTTTCTCTAATGCTTCAGATCGGGCCAAGCAC...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp AGTGACCAAATGATCATTCTTGAACTGGACTATCAGGACAGATTGGTGAAATCTTCTGACTCATGTCACTaGGCTGTCCTTGTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: SDQMIILELDYQDRLVKSSDSCH*AVLVAE
Trigger: CTCTGCAACAAGGACAGCTCAGTGACATGAGTCAGA...AGATTTCACCAATCTGTCCTGATAGTCCAGTTCAAGAATGATCATTTGGTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACGATGGCACTGAGGTCTaGTACACTACCTCCATCAGT +
Preference number: 4 (lower is better)
Translates to: QFILHICRIYKRNLSEENDGTEV*YTTSIS
Trigger: ACTGATGGAGGTAGTGTAGCAGACCTCAGTGCCATC...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp GGCTGCTTAAATACCTACTTAGAGCTATGTATAGTCAATTCAATTCTCAGTTACCATCCATTTGGTCCCTaGCGGGTTTCTCCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: GCLNTYLELCIVNSILSYHPFGP*RVSPGL
Trigger: CAAGCCAGGAGAAACCCGGCAGGGACCAAATGGATG...GTAACTGAGAATTGAATTGACTATACATAGCTCTAAGTAGGTATTTAAGCAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp GGCTGCTTAAATACCTACTTAGAGCTATGTATAGTCAATTCAATTCTCAGTTACGACCTCCCCCATCACTaGATCTTCGAGGAGGATGGA +
Preference number: 4 (lower is better)
Translates to: GCLNTYLELCIVNSILSYDLPHH*IFEEDG
Trigger: TCCATCCTCCTCGAAGATGCAGTGATGGGGGAGGTC...GTAACTGAGAATTGAATTGACTATACATAGCTCTAAGTAGGTATTTAAGCAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACAGTGGGATTACGGTGTaGGGAGATCCTAATGAAGGG +
Preference number: 4 (lower is better)
Translates to: QFILHICRIYKRNLSEENSGITV*GDPNEG
Trigger: CCCTTCATTAGGATCTCCCCACACCGTAATCCCACT...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp GGCTGCTTAAATACCTACTTAGAGCTATGTATAGTCAATTCAATTCTCAGTTACACTCTGAGGCTGCAGTaGGATTACGGTGTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: GCLNTYLELCIVNSILSYTLRLQ*DYGVGR
Trigger: TCTCCCCACACCGTAATCCCACTGCAGCCTCAGAGT...GTAACTGAGAATTGAATTGACTATACATAGCTCTAAGTAGGTATTTAAGCAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACCTGTGTTGGAAATGTTaGAGCAGGGTGGATGAGAGG +
Preference number: 4 (lower is better)
Translates to: QFILHICRIYKRNLSEENLCWKC*SRVDER
Trigger: CCTCTCATCCACCCTGCTCCAACATTTCCAACACAG...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATTCAGTGCCATTCCCTTaGAGCAGGCAGTTGGCATCT +
Preference number: 4 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNSVPFP*SRQLAS
Trigger: AGATGCCAACTGCCTGCTCCAAGGGAATGGCACTGA...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp AGTGACCAAATGATCATTCTTGAACTGGACTATCAGGACAGATTGGTGAAATCTACTGTGCTTGTTACCTaGTTAGCACCTGGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: SDQMIILELDYQDRLVKSTVLVT*LAPGES
Trigger: ACTCTCCCCAGGTGCTAACCAGGTAACAAGCACAGT...AGATTTCACCAATCTGTCCTGATAGTCCAGTTCAAGAATGATCATTTGGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp AGTGACCAAATGATCATTCTTGAACTGGACTATCAGGACAGATTGGTGAAATCTCAGGTTTTCGAGTCTTaGGTAGGCTTTTGTGCAACC +
Preference number: 4 (lower is better)
Translates to: SDQMIILELDYQDRLVKSQVFES*VGFCAT
Trigger: GGTTGCACAAAAGCCTACTCAAGACTCGAAAACCTG...AGATTTCACCAATCTGTCCTGATAGTCCAGTTCAAGAATGATCATTTGGTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp GGCTGCTTAAATACCTACTTAGAGCTATGTATAGTCAATTCAATTCTCAGTTACTGTGAAGTCTACACCTaGCAGGTCACTTCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: GCLNTYLELCIVNSILSYCEVYT*QVTSAR
Trigger: CCGAGCAGAAGTGACCTGTCAGGTGTAGACTTCACA...GTAACTGAGAATTGAATTGACTATACATAGCTCTAAGTAGGTATTTAAGCAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATGTGTGTTCAGCACTGTaGAGTCTACACCTGACAGGT +
Preference number: 4 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNVCSAL*SLHLTG
Trigger: ACCTGTCAGGTGTAGACTTCACAGTGCTGAACACAC...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACCTTCAGCTTGGAGGATaGCAGATCAGAAGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: QFILHICRIYKRNLSEENLQLGG*QIRSSR
Trigger: TCTGGAACTTCTGATCTGTCATCCTCCAAGCTGAAG...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATGCTCATGGGCTACTTTaGTGTCTTCAGAGATGCCAC +
Preference number: 4 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNAHGLL*CLQRCH
Trigger: GTGGCATCTCTGAAGACAGCAAAGTAGCCCATGAGC...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR GCA 90 bp GGCTGCTTAAATACCTACTTAGAGCTATGTATAGTCAATTCAATTCTCAGTTACCTGAGCTGTCCTTGTTaGAGAGTGAGGTTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: GCLNTYLELCIVNSILSYLSCPC*RVRLPL
Trigger: AAGGGGCAACCTCACTCTGCAACAAGGACAGCTCAG...GTAACTGAGAATTGAATTGACTATACATAGCTCTAAGTAGGTATTTAAGCAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACAATGAAGGGCAAGTCTaGATACGTCGGGCTACTAGA +
Preference number: 4 (lower is better)
Translates to: QFILHICRIYKRNLSEENNEGQV*IRRATR
Trigger: TCTAGTAGCCCGACGTATCCAGACTTGCCCTTCATT...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp AGTGACCAAATGATCATTCTTGAACTGGACTATCAGGACAGATTGGTGAAATCTGATAGGTCTCTGTGTTaGAAATGTTGGAGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SDQMIILELDYQDRLVKSDRSLC*KCWSRV
Trigger: CACCCTGCTCCAACATTTCCAACACAGAGACCTATC...AGATTTCACCAATCTGTCCTGATAGTCCAGTTCAAGAATGATCATTTGGTCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATGGTCGAGTCCATGATTaGGGTTTCATCGATGGCACT +
Preference number: 4 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNGRVHD*GFIDGT
Trigger: AGTGCCATCGATGAAACCCCAATCATGGACTCGACC...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACGGAAAGTATTTCCATTaGTGCCAAGTCCATCCCCAC +
Preference number: 4 (lower is better)
Translates to: QFILHICRIYKRNLSEENGKYFH*CQVHPH
Trigger: GTGGGGATGGACTTGGCACCAATGGAAATACTTTCC...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp CAGGAAAGACCAAGCCTAAAGAGATCTCATGTCCCATGGGTTAGCTATAGTGACTTAAAGGGCTGTTCATaGAAAGTATTTCCATTGGTG +
Preference number: 4 (lower is better)
Translates to: QERPSLKRSHVPWVSYSDLKGCS*KVFPLV
Trigger: CACCAATGGAAATACTTTCCATGAACAGCCCTTTAA...GTCACTATAGCTAACCCATGGGACATGAGATCTCTTTAGGCTTGGTCTTTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp GGCTGCTTAAATACCTACTTAGAGCTATGTATAGTCAATTCAATTCTCAGTTACCATGGATCTCTTTCTTaGTCAGCGAGGCCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: GCLNTYLELCIVNSILSYHGSLS*SARPSH
Trigger: ATGAGAGGGCCTCGCTGATCAAGAAAGAGATCCATG...GTAACTGAGAATTGAATTGACTATACATAGCTCTAAGTAGGTATTTAAGCAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATATAGGAACCACTTGCTaGAGAGCTGCTACGGGAATT +
Preference number: 4 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNIGTTC*RAATGI
Trigger: AATTCCCGTAGCAGCTCTTCAGCAAGTGGTTCCTAT...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp AGTGACCAAATGATCATTCTTGAACTGGACTATCAGGACAGATTGGTGAAATCTACACCTTCTAGGTCATaGCTCTCAAAGCTGTCAACT +
Preference number: 4 (lower is better)
Translates to: SDQMIILELDYQDRLVKSTPSRS*LSKLST
Trigger: AGTTGACAGCTTTGAGAGTCATGACCTAGAAGGTGT...AGATTTCACCAATCTGTCCTGATAGTCCAGTTCAAGAATGATCATTTGGTCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACTGTGGTAGAGAGCCATaGATCTCTTTCTTGATCAGC +
Preference number: 4 (lower is better)
Translates to: QFILHICRIYKRNLSEENCGREP*ISFLIS
Trigger: GCTGATCAAGAAAGAGATCCATGGCTCTCTACCACA...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp AGTGACCAAATGATCATTCTTGAACTGGACTATCAGGACAGATTGGTGAAATCTGAATGTGTTCTGTTTTaGTGCTTGGCCCGATCTGAA +
Preference number: 4 (lower is better)
Translates to: SDQMIILELDYQDRLVKSECVLF*CLARSE
Trigger: TTCAGATCGGGCCAAGCACCAAAACAGAACACATTC...AGATTTCACCAATCTGTCCTGATAGTCCAGTTCAAGAATGATCATTTGGTCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp GGCTGCTTAAATACCTACTTAGAGCTATGTATAGTCAATTCAATTCTCAGTTACTTGACAGTCTTCACCTaGAGGCACTCTTCCCGCTTT +
Preference number: 4 (lower is better)
Translates to: GCLNTYLELCIVNSILSYLTVFT*RHSSRF
Trigger: AAAGCGGGAAGAGTGCCTCCAGGTGAAGACTGTCAA...GTAACTGAGAATTGAATTGACTATACATAGCTCTAAGTAGGTATTTAAGCAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp GGCTGCTTAAATACCTACTTAGAGCTATGTATAGTCAATTCAATTCTCAGTTACTGGCTCCCATACTGCTaGGTCTTAAAGGGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: GCLNTYLELCIVNSILSYWLPYC*VLKGCS
Trigger: TGAACAGCCCTTTAAGACCCAGCAGTATGGGAGCCA...GTAACTGAGAATTGAATTGACTATACATAGCTCTAAGTAGGTATTTAAGCAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATCTGTGGGAAAGGTTCTaGATAATACTTGGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNLWERF*IILGLK
Trigger: CTTGAGCCCAAGTATTATTCAGAACCTTTCCCACAG...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACGGGATGTTCTTATCATaGTCTGAAGGTCGAAGCTAT +
Preference number: 4 (lower is better)
Translates to: QFILHICRIYKRNLSEENGMFLS*SEGRSY
Trigger: ATAGCTTCGACCTTCAGACCATGATAAGAACATCCC...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR TCA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATGGTCCCCATCATCTATaGTGGCATCAAAATCAATCT +
Preference number: 4 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNGPHHL*WHQNQS
Trigger: AGATTGATTTTGATGCCATCATAGATGATGGGGACC...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
3UTR CAA 72 bp CAAATGATCATTCTTGAACTGGACTATCAGGACAGATaGGTGAAATCTTGGGATAGAACACTTTTGACTCTC +
Preference number: 4 (lower is better)
Translates to: QMIILELDYQDR*VKSWDRTLLTL
Trigger: GAGAGTCAAAAGTGTTCTATCCCAAGATTTCACCAATCTGTCCTGATAGTCCAGTTCAAGAATGATCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACAATAGGGTTCAGTCTTaGAAACATTCCATTCACTTG +
Preference number: 4 (lower is better)
Translates to: QFILHICRIYKRNLSEENNRVQS*KHSIHL
Trigger: CAAGTGAATGGAATGTTTCCAAGACTGAACCCTATT...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp AGTGACCAAATGATCATTCTTGAACTGGACTATCAGGACAGATTGGTGAAATCTTACCCTGTTTGGTTCTaGGAATTTAAATACTGTACC +
Preference number: 4 (lower is better)
Translates to: SDQMIILELDYQDRLVKSYPVWF*EFKYCT
Trigger: GGTACAGTATTTAAATTCCCAGAACCAAACAGGGTA...AGATTTCACCAATCTGTCCTGATAGTCCAGTTCAAGAATGATCATTTGGTCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATTGCCCATACCCTGTTTaGTTCTGGGAATTTAAATAC +
Preference number: 4 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNCPYPV*FWEFKY
Trigger: GTATTTAAATTCCCAGAACCAAACAGGGTATGGGCA...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CCA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATCATACGGTTTCTCATTaGAATGTGTTCTGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNHTVSH*NVFCFG
Trigger: ACCAAAACAGAACACATTCCAATGAGAAACCGTATG...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 90 bp GGGCCACCTGTGGCAGCTGCATACTTGGCCTTAAGGCGGTACTGCTaGACGGGTGTGAGGCTGAGCAGACTGGGCAGCCCGTCACCCTGG +
Preference number: 5 (lower is better)
Translates to: GPPVAAAYLALRRYC*TGVRLSRLGSPSPW
Trigger: CCAGGGTGACGGGCTGCCCAGTCTGCTCAGCCTCACACCCGTGCAGCAGTACCGCCTTAAGGCCAAGTATGCAGCTGCCACAGGTGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 90 bp GGTGGGCCACCTGTGGCAGCTGCATACTTGGCCTTAAGGCGGTACTaGTGCACGGGTGTGAGGCTGAGCAGACTGGGCAGCCCGTCACCC +
Preference number: 5 (lower is better)
Translates to: GGPPVAAAYLALRRY*CTGVRLSRLGSPSP
Trigger: GGGTGACGGGCTGCCCAGTCTGCTCAGCCTCACACCCGTGCAGCAGTACCGCCTTAAGGCCAAGTATGCAGCTGCCACAGGTGGCCCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS TCA 90 bp CTCACCAAATGCTCCCTGAGTTGGCCGGCCAGGGGACCTGGACTGTaGATGGCTGCCGGAATCTCTCGGGGGTGGAGGCCGAGGGTGCAT +
Preference number: 5 (lower is better)
Translates to: LTKCSLSWPARGPGL*MAAGISRGWRPRVH
Trigger: ATGCACCCTCGGCCTCCACCCCCGAGAGATTCCGGCAGCCATTCACAGTCCAGGTCCCCTGGCCGGCCAACTCAGGGAGCATTTGGTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 90 bp CCTTCTGCTCACCAAATGCTCCCTGAGTTGGCCGGCCAGGGGACCTaGACTGTGAATGGCTGCCGGAATCTCTCGGGGGTGGAGGCCGAG +
Preference number: 5 (lower is better)
Translates to: PSAHQMLPELAGQGT*TVNGCRNLSGVEAE
Trigger: CTCGGCCTCCACCCCCGAGAGATTCCGGCAGCCATTCACAGTCCAGGTCCCCTGGCCGGCCAACTCAGGGAGCATTTGGTGAGCAGAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 90 bp CTCCATGTGGGGCAGAGGTGTGGGTGGTGGGCCACCTGTGGCAGCTaGATACTTGGCCTTAAGGCGGTACTGCTGCACGGGTGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: LHVGQRCGWWATCGS*ILGLKAVLLHGCEA
Trigger: AGCCTCACACCCGTGCAGCAGTACCGCCTTAAGGCCAAGTATGCAGCTGCCACAGGTGGCCCACCACCCACACCTCTGCCCCACATGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 90 bp GGTCTTCAGGCTCAGCCTCTCCATGTGGGGCAGAGGTGTGGGTGGTaGGCCACCTGTGGCAGCTGCATACTTGGCCTTAAGGCGGTACTG +
Preference number: 5 (lower is better)
Translates to: GLQAQPLHVGQRCGW*ATCGSCILGLKAVL
Trigger: CAGTACCGCCTTAAGGCCAAGTATGCAGCTGCCACAGGTGGCCCACCACCCACACCTCTGCCCCACATGGAGAGGCTGAGCCTGAAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 90 bp GAGGCATCAGGTGACGCCCTCTGTATGTGTGACCTCCCCCATCACTaGATCTTCGAGGAGGATGGACTGGAGGCAGGGTCACCCCAGAGT +
Preference number: 5 (lower is better)
Translates to: EASGDALCMCDLPHH*IFEEDGLEAGSPQS
Trigger: ACTCTGGGGTGACCCTGCCTCCAGTCCATCCTCCTCGAAGATGCAGTGATGGGGGAGGTCACACATACAGAGGGCGTCACCTGATGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 90 bp GAGGAGGGTGGTAGTGAGGCTCCATGTAGCCATTCCGGGGATCCATaGCAAACACAGTCCCACGGTAAGGGAGAGAGGGCTCCGCCAGAT +
Preference number: 5 (lower is better)
Translates to: EEGGSEAPCSHSGDP*QTQSHGKGERAPPD
Trigger: ATCTGGCGGAGCCCTCTCTCCCTTACCGTGGGACTGTGTTTGCCATGGATCCCCGGAATGGCTACATGGAGCCTCACTACCACCCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS CCA 90 bp CCATGGCATGAAGGTACTCCATATGGATGGCCCCTGCACCAGCAGTaGCAGCTGAGGGAAGGATGTCTGCATAAGGGCTGCGCTGGCCTG +
Preference number: 5 (lower is better)
Translates to: PWHEGTPYGWPLHQQ*QLREGCLHKGCAGL
Trigger: CAGGCCAGCGCAGCCCTTATGCAGACATCCTTCCCTCAGCTGCCACTGCTGGTGCAGGGGCCATCCATATGGAGTACCTTCATGCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS TCA 90 bp ATGAAGGTACTCCATATGGATGGCCCCTGCACCAGCAGTGGCAGCTaGGGGAAGGATGTCTGCATAAGGGCTGCGCTGGCCTGTCAGCAG +
Preference number: 5 (lower is better)
Translates to: MKVLHMDGPCTSSGS*GKDVCIRAALACQQ
Trigger: CTGCTGACAGGCCAGCGCAGCCCTTATGCAGACATCCTTCCCTCAGCTGCCACTGCTGGTGCAGGGGCCATCCATATGGAGTACCTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS TCA 90 bp CCTGTTGACCAGGGCGGCTGGGCCCCTGGTGTTGCATGCTGCCACTaGGTAGCTGATGGGCAATGTATCCCTGTCCCATTTGATCTTGGG +
Preference number: 5 (lower is better)
Translates to: PVDQGGWAPGVACCH*VADGQCIPVPFDLG
Trigger: CCCAAGATCAAATGGGACAGGGATACATTGCCCATCAGCTACTCAGTGGCAGCATGCAACACCAGGGGCCCAGCCGCCCTGGTCAACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS TCA 90 bp TTTGAGGTAGTGTTGCTCAGCTCCTTCTGCTCACCAAATGCTCCCTaGGTTGGCCGGCCAGGGGACCTGGACTGTGAATGGCTGCCGGAA +
Preference number: 5 (lower is better)
Translates to: FEVVLLSSFCSPNAP*VGRPGDLDCEWLPE
Trigger: TTCCGGCAGCCATTCACAGTCCAGGTCCCCTGGCCGGCCAACTCAGGGAGCATTTGGTGAGCAGAAGGAGCTGAGCAACACTACCTCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 90 bp GGTCCCTGCCGGGTTTCTCCTGGCTTGCAAAGCAAGGGCTGTGGTTaGCGTGGAAATGGTCGAGTCCATGATTGGGGTTTCATCGATGGC +
Preference number: 5 (lower is better)
Translates to: GPCRVSPGLQSKGCG*RGNGRVHDWGFIDG
Trigger: GCCATCGATGAAACCCCAATCATGGACTCGACCATTTCCACGGCAACCACAGCCCTTGCTTTGCAAGCCAGGAGAAACCCGGCAGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 90 bp CTTGTGGGCTTGCTCTGTGAGGACTCAGAAGGGCCAGAGCTGACCTaGACGGGGTTCAGAACTGTCGGAATCCCAGGGATAGGTCTCTGT +
Preference number: 5 (lower is better)
Translates to: LVGLLCEDSEGPELT*TGFRTVGIPGIGLC
Trigger: ACAGAGACCTATCCCTGGGATTCCGACAGTTCTGAACCCCGTCCAGGTCAGCTCTGGCCCTTCTGAGTCCTCACAGAGCAAGCCCACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS TCA 90 bp CTCCATCAGTCAGAGGAAGCTCGAGCCCACTGTTGGAATAGTTGCTaGTGGGGGACTGTTGGCTGCTGCATGAAGACTGACCACCAGGGC +
Preference number: 5 (lower is better)
Translates to: LHQSEEARAHCWNSC*WGTVGCCMKTDHQG
Trigger: GCCCTGGTGGTCAGTCTTCATGCAGCAGCCAACAGTCCCCCATCAGCAACTATTCCAACAGTGGGCTCGAGCTTCCTCTGACTGATGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS TCA 90 bp CTGCTGTGCGCTAGGGCGCTGCTGACCACACTTCAGCTTGGAGGATaGCAGATCAGAAGTTCCAGAACTGACCTCGTTCCACTGGATGGG +
Preference number: 5 (lower is better)
Translates to: LLCARALLTTLQLGG*QIRSSRTDLVPLDG
Trigger: CCCATCCAGTGGAACGAGGTCAGTTCTGGAACTTCTGATCTGTCATCCTCCAAGCTGAAGTGTGGTCAGCAGCGCCCTAGCGCACAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS TCA 90 bp GATGCCCGCGGAGTGGTGAGACGGGAGGAGCTGTGGGAAAGGTTCTaGATAATACTTGGGCTCAAGGCCCCTGACATTAGGCTGGTATGG +
Preference number: 5 (lower is better)
Translates to: DARGVVRREELWERF*IILGLKAPDIRLVW
Trigger: CCATACCAGCCTAATGTCAGGGGCCTTGAGCCCAAGTATTATTCAGAACCTTTCCCACAGCTCCTCCCGTCTCACCACTCCGCGGGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 90 bp GGGCTGGGGAGGTCTTCATCAGGCTTGATCTTGGACCGCTTATTATaGATAGGGTCACCAGTGCTGCTCACTGCAGACTCGCTTGTGGGC +
Preference number: 5 (lower is better)
Translates to: GLGRSSSGLILDRLL*IGSPVLLTADSLVG
Trigger: GCCCACAAGCGAGTCTGCAGTGAGCAGCACTGGTGACCCTATGCATAATAAGCGGTCCAAGATCAAGCCTGATGAAGACCTCCCCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS CCA 90 bp CAGAACTGTCGGAATCCCAGGGATAGGTCTCTGTGTTGGAAATGTTaGAGCAGGGTGGATGAGAGGAGGGCTGTGTCCGAATGCGGAGCC +
Preference number: 5 (lower is better)
Translates to: QNCRNPRDRSLCWKC*SRVDERRAVSECGA
Trigger: GGCTCCGCATTCGGACACAGCCCTCCTCTCATCCACCCTGCTCCAACATTTCCAACACAGAGACCTATCCCTGGGATTCCGACAGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS TCA 90 bp CCCACTGTTGGAATAGTTGCTGATGGGGGACTGTTGGCTGCTGCATaGAGACTGACCACCAGGGCTTGGCTGAGATGTCATGGGCTTCTC +
Preference number: 5 (lower is better)
Translates to: PTVGIVADGGLLAAA*RLTTRAWLRCHGLL
Trigger: GAGAAGCCCATGACATCTCAGCCAAGCCCTGGTGGTCAGTCTTCATGCAGCAGCCAACAGTCCCCCATCAGCAACTATTCCAACAGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 90 bp TTGATGTGCTCCATCCATTTGGTCCCTGCCGGGTTTCTCCTGGCTTaGAAAGCAAGGGCTGTGGTTGCCGTGGAAATGGTCGAGTCCATG +
Preference number: 5 (lower is better)
Translates to: LMCSIHLVPAGFLLA*KARAVVAVEMVESM
Trigger: CATGGACTCGACCATTTCCACGGCAACCACAGCCCTTGCTTTGCAAGCCAGGAGAAACCCGGCAGGGACCAAATGGATGGAGCACATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 90 bp TGGGAAATCTGGTGCTGTCCATGGCATGAAGGTACTCCATATGGATaGCCCCTGCACCAGCAGTGGCAGCTGAGGGAAGGATGTCTGCAT +
Preference number: 5 (lower is better)
Translates to: WEIWCCPWHEGTPYG*PLHQQWQLREGCLH
Trigger: ATGCAGACATCCTTCCCTCAGCTGCCACTGCTGGTGCAGGGGCCATCCATATGGAGTACCTTCATGCCATGGACAGCACCAGATTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS CCA 90 bp GGAATCCCAGGGATAGGTCTCTGTGTTGGAAATGTTGGAGCAGGGTaGATGAGAGGAGGGCTGTGTCCGAATGCGGAGCCTAAGCTTTGC +
Preference number: 5 (lower is better)
Translates to: GIPGIGLCVGNVGAG*MRGGLCPNAEPKLC
Trigger: GCAAAGCTTAGGCTCCGCATTCGGACACAGCCCTCCTCTCATCCACCCTGCTCCAACATTTCCAACACAGAGACCTATCCCTGGGATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS CCA 90 bp GACGGGGTTCAGAACTGTCGGAATCCCAGGGATAGGTCTCTGTGTTaGAAATGTTGGAGCAGGGTGGATGAGAGGAGGGCTGTGTCCGAA +
Preference number: 5 (lower is better)
Translates to: DGVQNCRNPRDRSLC*KCWSRVDERRAVSE
Trigger: TTCGGACACAGCCCTCCTCTCATCCACCCTGCTCCAACATTTCCAACACAGAGACCTATCCCTGGGATTCCGACAGTTCTGAACCCCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS-3UTR CAA 90 bp CAGAAAGCTAGCTTAGCCACAACGTCATCCTACATGGCAAAGTTTCTTCCCTGGCAAATGCTCCCTGAGTaGGCCGGCCAGGGGACCTGG +
Preference number: 5 (lower is better)
Translates to: QKASLATTSSYMAKFLPWQMLPE*AGQGTW
Trigger: CCAGGTCCCCTGGCCGGCCAACTCAGGGAGCATTTG...CCAGGGAAGAAACTTTGCCATGTAGGATGACGTTGTGGCTAAGCTAGCTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS TCA 90 bp CTTCTCAGCCTTGACAGTCTTCACCTGGAGGCACTCTTCCCGCTTTaGGGTAGTGTTGCTCAGCTCCTTCTGCTCACCAAATGCTCCCTG +
Preference number: 5 (lower is better)
Translates to: LLSLDSLHLEALFPL*GSVAQLLLLTKCSL
Trigger: CAGGGAGCATTTGGTGAGCAGAAGGAGCTGAGCAACACTACCTCAAAGCGGGAAGAGTGCCTCCAGGTGAAGACTGTCAAGGCTGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS TCA 90 bp TTGTATAGCCCAAAACCCCGAGGCTGCTGTGCGCTAGGGCGCTGCTaGCCACACTTCAGCTTGGAGGATGACAGATCAGAAGTTCCAGAA +
Preference number: 5 (lower is better)
Translates to: LYSPKPRGCCALGRC*PHFSLEDDRSEVPE
Trigger: TTCTGGAACTTCTGATCTGTCATCCTCCAAGCTGAAGTGTGGTCAGCAGCGCCCTAGCGCACAGCAGCCTCGGGGTTTTGGGCTATACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS TCA 90 bp AGGATTAAAGCTATTGAGGCTGCTGAAGCGTTGAACCCTGGCAAGTaGCATGTTCTCCGAGACTGTCCTCACAGGGTCGCTGGCTCTCCT +
Preference number: 5 (lower is better)
Translates to: RIKAIEAAEALNPGK*HVLRDCPHRVAGSP
Trigger: AGGAGAGCCAGCGACCCTGTGAGGACAGTCTCGGAGAACATGTCACTTGCCAGGGTTCAACGCTTCAGCAGCCTCAATAGCTTTAATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 90 bp CAAAGCAAGGGCTGTGGTTGCCGTGGAAATGGTCGAGTCCATGATTaGGGTTTCATCGATGGCACTGAGGTCTGCTACACTACCTCCATC +
Preference number: 5 (lower is better)
Translates to: QSKGCGCRGNGRVHD*GFIDGTEVCYTTSI
Trigger: GATGGAGGTAGTGTAGCAGACCTCAGTGCCATCGATGAAACCCCAATCATGGACTCGACCATTTCCACGGCAACCACAGCCCTTGCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 90 bp ATTGTAGGTACTGCTATTCTCCCCGAGGGTCTGATATCCCCCAGCTaGGCCAGTGCCAACCTTCCACAGATTATGTGGGTGTACCACCAT +
Preference number: 5 (lower is better)
Translates to: IVGTAILPEGLISPS*ASANLPQIMWVYHH
Trigger: ATGGTGGTACACCCACATAATCTGTGGAAGGTTGGCACTGGCCCAGCTGGGGGATATCAGACCCTCGGGGAGAATAGCAGTACCTACAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 90 bp TCCATTGGTGCCAAGTCCATCCCCACTGTGGATTGCAAAGTGCTCTaGGCCATTGTAGGTACTGCTATTCTCCCCGAGGGTCTGATATCC +
Preference number: 5 (lower is better)
Translates to: SIGAKSIPTVDCKVL*AIVGTAILPEGLIS
Trigger: GGATATCAGACCCTCGGGGAGAATAGCAGTACCTACAATGGCCCAGAGCACTTTGCAATCCACAGTGGGGATGGACTTGGCACCAATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 90 bp TTAGCACCTGGGGAGAGTAACTCAGAGTTTTCAGTGCCATTCCCTTaGAGCAGGCAGTTGGCATCTGAGAGGGAGAACGAGCCAGCTTTC +
Preference number: 5 (lower is better)
Translates to: LAPGESNSEFSVPFP*SRQLASERENEPAF
Trigger: GAAAGCTGGCTCGTTCTCCCTCTCAGATGCCAACTGCCTGCTCCAAGGGAATGGCACTGAAAACTCTGAGTTACTCTCCCCAGGTGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 90 bp AATGGTCGAGTCCATGATTGGGGTTTCATCGATGGCACTGAGGTCTaGTACACTACCTCCATCAGTCAGAGGAAGCTCGAGCCCACTGTT +
Preference number: 5 (lower is better)
Translates to: NGRVHDWGFIDGTEV*YTTSISQRKLEPTV
Trigger: AACAGTGGGCTCGAGCTTCCTCTGACTGATGGAGGTAGTGTAGCAGACCTCAGTGCCATCGATGAAACCCCAATCATGGACTCGACCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 90 bp AGTCCAAGTCCTCTGGCTCATGGGCTACTTTGCTGTCTTCAGAGATaGCACTCTGCAACTGCTGCCCATACCCTGTTTGGTTCTGGGAAT +
Preference number: 5 (lower is better)
Translates to: SPSPLAHGLLCCLQR*HSATAAHTLFGSGN
Trigger: ATTCCCAGAACCAAACAGGGTATGGGCAGCAGTTGCAGAGTGGCATCTCTGAAGACAGCAAAGTAGCCCATGAGCCAGAGGACTTGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 90 bp TACTGCTATTCTCCCCGAGGGTCTGATATCCCCCAGCTGGGCCAGTaGCAACCTTCCACAGATTATGTGGGTGTACCACCATATTGTTGT +
Preference number: 5 (lower is better)
Translates to: YCYSPRGSDIPQLGQ*QPSTDYVGVPPYCC
Trigger: ACAACAATATGGTGGTACACCCACATAATCTGTGGAAGGTTGGCACTGGCCCAGCTGGGGGATATCAGACCCTCGGGGAGAATAGCAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 90 bp TTGGAGGATGACAGATCAGAAGTTCCAGAACTGACCTCGTTCCACTaGATGGGCAAATCAGTTTTACTGCCCTCAGAGCAGGGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LEDDRSEVPELTSFH*MGKSVLLPSEQGCS
Trigger: GGAGCAGCCCTGCTCTGAGGGCAGTAAAACTGATTTGCCCATCCAGTGGAACGAGGTCAGTTCTGGAACTTCTGATCTGTCATCCTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 90 bp GCACTGGAAGTCAGTGGCTGCCTGTTGAGCTGGCTCCCATACTGCTaGGTCTTAAAGGGCTGTTCATGGAAAGTATTTCCATTGGTGCCA +
Preference number: 5 (lower is better)
Translates to: ALEVSGCLLSWLPYC*VLKGCSWKVFPLVP
Trigger: TGGCACCAATGGAAATACTTTCCATGAACAGCCCTTTAAGACCCAGCAGTATGGGAGCCAGCTCAACAGGCAGCCACTGACTTCCAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 90 bp AGAGTAACTCAGAGTTTTCAGTGCCATTCCCTTGGAGCAGGCAGTTaGCATCTGAGAGGGAGAACGAGCCAGCTTTCCTGTCTTGCTGAC +
Preference number: 5 (lower is better)
Translates to: RVTQSFQCHSLGAGS*HLRGRTSQLSCLAD
Trigger: GTCAGCAAGACAGGAAAGCTGGCTCGTTCTCCCTCTCAGATGCCAACTGCCTGCTCCAAGGGAATGGCACTGAAAACTCTGAGTTACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 90 bp AGAGCACTGGAAGTCAGTGGCTGCCTGTTGAGCTGGCTCCCATACTaGTGGGTCTTAAAGGGCTGTTCATGGAAAGTATTTCCATTGGTG +
Preference number: 5 (lower is better)
Translates to: RALEVSGCLLSWLPY*WVLKGCSWKVFPLV
Trigger: CACCAATGGAAATACTTTCCATGAACAGCCCTTTAAGACCCAGCAGTATGGGAGCCAGCTCAACAGGCAGCCACTGACTTCCAGTGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp TTTCTTGTGGGCTGTCCTTTGATTTATAAGGAACCTCTGGGAGAAGGCTGCAGGAAGCAAGGGCTGTGGTaGCCGTGGAAATGGTCGAGT +
Preference number: 5 (lower is better)
Translates to: FLVGCPLIYKEPLGEGCRKQGLW*PWKWSS
Trigger: ACTCGACCATTTCCACGGCAACCACAGCCCTTGCTT...CCTGCAGCCTTCTCCCAGAGGTTCCTTATAAATCAAAGGACAGCCCACAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS TCA 90 bp GACCACACTTCAGCTTGGAGGATGACAGATCAGAAGTTCCAGAACTaGCCTCGTTCCACTGGATGGGCAAATCAGTTTTACTGCCCTCAG +
Preference number: 5 (lower is better)
Translates to: DHTSAWRMTDQKFQN*PRSTGWANQFYCPQ
Trigger: CTGAGGGCAGTAAAACTGATTTGCCCATCCAGTGGAACGAGGTCAGTTCTGGAACTTCTGATCTGTCATCCTCCAAGCTGAAGTGTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 90 bp ATGGAAAGTATTTCCATTGGTGCCAAGTCCATCCCCACTGTGGATTaGAAAGTGCTCTGGGCCATTGTAGGTACTGCTATTCTCCCCGAG +
Preference number: 5 (lower is better)
Translates to: MESISIGAKSIPTVD*KVLWAIVGTAILPE
Trigger: CTCGGGGAGAATAGCAGTACCTACAATGGCCCAGAGCACTTTGCAATCCACAGTGGGGATGGACTTGGCACCAATGGAAATACTTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 90 bp GCTGATGGGCAATGTATCCCTGTCCCATTTGATCTTGGGTTTGCATaGCATTCACTGTGTTGCCAGCTAACTCATTTGGTGCCACGGACA +
Preference number: 5 (lower is better)
Translates to: ADGQCIPVPFDLGFA*HSLCCQLTHLVPRT
Trigger: TGTCCGTGGCACCAAATGAGTTAGCTGGCAACACAGTGAATGGCATGCAAACCCAAGATCAAATGGGACAGGGATACATTGCCCATCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 90 bp CTGTTGAGCTGGCTCCCATACTGCTGGGTCTTAAAGGGCTGTTCATaGAAAGTATTTCCATTGGTGCCAAGTCCATCCCCACTGTGGATT +
Preference number: 5 (lower is better)
Translates to: LLSWLPYCWVLKGCS*KVFPLVPSPSPLWI
Trigger: AATCCACAGTGGGGATGGACTTGGCACCAATGGAAATACTTTCCATGAACAGCCCTTTAAGACCCAGCAGTATGGGAGCCAGCTCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp TTTCTTGTGGGCTGTCCTTTGATTTATAAGGAACCTCTGGGAGAAGGCTGCAGGGGCTCCTCACTGATTTaGTTGAGACCCTGCACACTC +
Preference number: 5 (lower is better)
Translates to: FLVGCPLIYKEPLGEGCRGSSLI*LRPCTL
Trigger: GAGTGTGCAGGGTCTCAACAAAATCAGTGAGGAGCC...CCTGCAGCCTTCTCCCAGAGGTTCCTTATAAATCAAAGGACAGCCCACAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp CAGAAAGCTAGCTTAGCCACAACGTCATCCTACATGGCAAAGTTTCTTCCCTGGCCATGGATCTCTTTCTaGATCAGCGAGGCCCTCTCA +
Preference number: 5 (lower is better)
Translates to: QKASLATTSSYMAKFLPWPWISF*ISEALS
Trigger: TGAGAGGGCCTCGCTGATCAAGAAAGAGATCCATGG...CCAGGGAAGAAACTTTGCCATGTAGGATGACGTTGTGGCTAAGCTAGCTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp TTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACACCCTCCTAGTGGCAGCTGCATACTaGGCCTTAAGGCGGTACTGC +
Preference number: 5 (lower is better)
Translates to: LHICRIYKRNLSEENTLLVAAAY*ALRRYC
Trigger: GCAGTACCGCCTTAAGGCCAAGTATGCAGCTGCCAC...TAGGAGGGTGTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 90 bp GGCTCATGGGCTACTTTGCTGTCTTCAGAGATGCCACTCTGCAACTaGTGCCCATACCCTGTTTGGTTCTGGGAATTTAAATACTGTACC +
Preference number: 5 (lower is better)
Translates to: GSWATLLSSEMPLCN*CPYPVWFWEFKYCT
Trigger: GGTACAGTATTTAAATTCCCAGAACCAAACAGGGTATGGGCAGCAGTTGCAGAGTGGCATCTCTGAAGACAGCAAAGTAGCCCATGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 90 bp TCCTCTGGCTCATGGGCTACTTTGCTGTCTTCAGAGATGCCACTCTaGAACTGCTGCCCATACCCTGTTTGGTTCTGGGAATTTAAATAC +
Preference number: 5 (lower is better)
Translates to: SSGSWATLLSSEMPL*NCCPYPVWFWEFKY
Trigger: GTATTTAAATTCCCAGAACCAAACAGGGTATGGGCAGCAGTTGCAGAGTGGCATCTCTGAAGACAGCAAAGTAGCCCATGAGCCAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 90 bp AGATGGATCATAATGGTAACGGCCCTCATGATGTCTGGCATCAATTaGTACAGGAGGATGGAAGGCAGGGAAAAGATGAGGAGGGTGGTA +
Preference number: 5 (lower is better)
Translates to: RWIIMVTALMMSGIN*YRRMEGREKMRRVV
Trigger: TACCACCCTCCTCATCTTTTCCCTGCCTTCCATCCTCCTGTACCAATTGATGCCAGACATCATGAGGGCCGTTACCATTATGATCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS CCA 90 bp CTGTCTTCAGAGATGCCACTCTGCAACTGCTGCCCATACCCTGTTTaGTTCTGGGAATTTAAATACTGTACCACATCATCTGGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: LSSEMPLCNCCPYPV*FWEFKYCTTSSGRR
Trigger: CCTCCTGCCAGATGATGTGGTACAGTATTTAAATTCCCAGAACCAAACAGGGTATGGGCAGCAGTTGCAGAGTGGCATCTCTGAAGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp CAGAAAGCTAGCTTAGCCACAACGTCATCCTACATGGCAAAGTTTCTTCCCTGGTTGCTGTCTCTCCTGTaGAGTGTGTTCAGCACTGTG +
Preference number: 5 (lower is better)
Translates to: QKASLATTSSYMAKFLPWLLSLL*SVFSTV
Trigger: CACAGTGCTGAACACACTCAACAGGAGAGACAGCAA...CCAGGGAAGAAACTTTGCCATGTAGGATGACGTTGTGGCTAAGCTAGCTTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACGGTTGCCCCTTGGCATaGCCTGACGCCTGTTACCCC +
Preference number: 5 (lower is better)
Translates to: QFILHICRIYKRNLSEENGCPLA*PDACYP
Trigger: GGGGTAACAGGCGTCAGGCAATGCCAAGGGGCAACC...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp TTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACACCCTCCTATTCAGTGCCATTCCCTaGGAGCAGGCAGTTGGCATC +
Preference number: 5 (lower is better)
Translates to: LHICRIYKRNLSEENTLLFSAIP*EQAVGI
Trigger: GATGCCAACTGCCTGCTCCAAGGGAATGGCACTGAA...TAGGAGGGTGTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 90 bp TCAGAGATGCCACTCTGCAACTGCTGCCCATACCCTGTTTGGTTCTaGGAATTTAAATACTGTACCACATCATCTGGCAGGAGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: SEMPLCNCCPYPVWF*EFKYCTTSSGRRSS
Trigger: TGAAGACCTCCTGCCAGATGATGTGGTACAGTATTTAAATTCCCAGAACCAAACAGGGTATGGGCAGCAGTTGCAGAGTGGCATCTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp CAGAAAGCTAGCTTAGCCACAACGTCATCCTACATGGCAAAGTTTCTTCCCTGGGTGCAGCCAGGGATTTaGCATACATACGGTTTCTCA +
Preference number: 5 (lower is better)
Translates to: QKASLATTSSYMAKFLPWVQPGI*HTYGFS
Trigger: TGAGAAACCGTATGTATGCAAAATCCCTGGCTGCAC...CCAGGGAAGAAACTTTGCCATGTAGGATGACGTTGTGGCTAAGCTAGCTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACGTCAGTGGCTGCCTGTaGAGCTGGCTCCCATACTGC +
Preference number: 5 (lower is better)
Translates to: QFILHICRIYKRNLSEENVSGCL*SWLPYC
Trigger: GCAGTATGGGAGCCAGCTCAACAGGCAGCCACTGAC...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 90 bp TCATGGGCTACTTTGCTGTCTTCAGAGATGCCACTCTGCAACTGCTaGCCATACCCTGTTTGGTTCTGGGAATTTAAATACTGTACCACA +
Preference number: 5 (lower is better)
Translates to: SWATLLSSEMPLCNC*PYPVWFWEFKYCTT
Trigger: TGTGGTACAGTATTTAAATTCCCAGAACCAAACAGGGTATGGGCAGCAGTTGCAGAGTGGCATCTCTGAAGACAGCAAAGTAGCCCATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp CAGAAAGCTAGCTTAGCCACAACGTCATCCTACATGGCAAAGTTTCTTCCCTGGCTGCTACGGGAATTATaGAGGATTGTAACCAAGGAG +
Preference number: 5 (lower is better)
Translates to: QKASLATTSSYMAKFLPWLLREL*RIVTKE
Trigger: CTCCTTGGTTACAATCCTCAATAATTCCCGTAGCAG...CCAGGGAAGAAACTTTGCCATGTAGGATGACGTTGTGGCTAAGCTAGCTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp AGTGACCAAATGATCATTCTTGAACTGGACTATCAGGACAGATTGGTGAAATCTACTGACCACCAGGGCTaGGCTGAGATGTCATGGGCT +
Preference number: 5 (lower is better)
Translates to: SDQMIILELDYQDRLVKSTDHQG*AEMSWA
Trigger: AGCCCATGACATCTCAGCCAAGCCCTGGTGGTCAGT...AGATTTCACCAATCTGTCCTGATAGTCCAGTTCAAGAATGATCATTTGGTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp AGTGACCAAATGATCATTCTTGAACTGGACTATCAGGACAGATTGGTGAAATCTCGGGTTTCTCCTGGCTaGCAAAGCAAGGGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: SDQMIILELDYQDRLVKSRVSPG*QSKGCG
Trigger: ACCACAGCCCTTGCTTTGCAAGCCAGGAGAAACCCG...AGATTTCACCAATCTGTCCTGATAGTCCAGTTCAAGAATGATCATTTGGTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACCCTCGCTGGACCTCCTaGAAGCATCTGTGGAGATGG +
Preference number: 5 (lower is better)
Translates to: QFILHICRIYKRNLSEENPRWTS*KHLWRW
Trigger: CCATCTCCACAGATGCTTCAAGGAGGTCCAGCGAGG...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp CAGAAAGCTAGCTTAGCCACAACGTCATCCTACATGGCAAAGTTTCTTCCCTGGATGCCATTCACTGTGTaGCCAGCTAACTCATTTGGT +
Preference number: 5 (lower is better)
Translates to: QKASLATTSSYMAKFLPWMPFTV*PANSFG
Trigger: ACCAAATGAGTTAGCTGGCAACACAGTGAATGGCAT...CCAGGGAAGAAACTTTGCCATGTAGGATGACGTTGTGGCTAAGCTAGCTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp CAGGAAAGACCAAGCCTAAAGAGATCTCATGTCCCATGGGTTAGCTATAGTGACCTGTCCCATTTGATCTaGGGTTTGCATGCCATTCAC +
Preference number: 5 (lower is better)
Translates to: QERPSLKRSHVPWVSYSDLSHLI*GLHAIH
Trigger: GTGAATGGCATGCAAACCCAAGATCAAATGGGACAG...GTCACTATAGCTAACCCATGGGACATGAGATCTCTTTAGGCTTGGTCTTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp TTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACACCCTCCTAACTGAAGCCCATGGTTaGGTCATAGAACTGACCGGA +
Preference number: 5 (lower is better)
Translates to: LHICRIYKRNLSEENTLLTEAHG*VIELTG
Trigger: TCCGGTCAGTTCTATGACCAAACCATGGGCTTCAGT...TAGGAGGGTGTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACCCTTGGAGCAGGCAGTaGGCATCTGAGAGGGAGAAC +
Preference number: 5 (lower is better)
Translates to: QFILHICRIYKRNLSEENPWSRQ*ASEREN
Trigger: GTTCTCCCTCTCAGATGCCAACTGCCTGCTCCAAGG...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp CAGAAAGCTAGCTTAGCCACAACGTCATCCTACATGGCAAAGTTTCTTCCCTGGATAACTGCAAGGAACTaGCTTTCTTCTGCAAGGGAG +
Preference number: 5 (lower is better)
Translates to: QKASLATTSSYMAKFLPWITARN*LSSARE
Trigger: CTCCCTTGCAGAAGAAAGCAAGTTCCTTGCAGTTAT...CCAGGGAAGAAACTTTGCCATGTAGGATGACGTTGTGGCTAAGCTAGCTTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS TCA 90 bp TCAGTCTTGGAAACATTCCATTCACTTGTTTTAGCCTTTCAAGTTTaGTGTGCTCCATCCATTTGGTCCCTGCCGGGTTTCTCCTGGCTT +
Preference number: 5 (lower is better)
Translates to: SVLETFHSLVLAFQV*CAPSIWSLPGFSWL
Trigger: AAGCCAGGAGAAACCCGGCAGGGACCAAATGGATGGAGCACATCAAACTTGAAAGGCTAAAACAAGTGAATGGAATGTTTCCAAGACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 90 bp CTTGGAAACATTCCATTCACTTGTTTTAGCCTTTCAAGTTTGATGTaGTCCATCCATTTGGTCCCTGCCGGGTTTCTCCTGGCTTGCAAA +
Preference number: 5 (lower is better)
Translates to: LGNIPFTCFSLSSLM*SIHLVPAGFLLACK
Trigger: TTTGCAAGCCAGGAGAAACCCGGCAGGGACCAAATGGATGGAGCACATCAAACTTGAAAGGCTAAAACAAGTGAATGGAATGTTTCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATTCACTGCAGACTCGCTaGTGGGCTTGCTCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNSLQTR*WACSVR
Trigger: CCTCACAGAGCAAGCCCACAAGCGAGTCTGCAGTGA...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp TTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACACCCTCCTAGTTCTGTTTTGGTGCTaGGCCCGATCTGAAGCATTA +
Preference number: 5 (lower is better)
Translates to: LHICRIYKRNLSEENTLLVLFWC*ARSEAL
Trigger: TAATGCTTCAGATCGGGCCAAGCACCAAAACAGAAC...TAGGAGGGTGTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACGATACCGCAGGGGCTTaGGAGGGTAGAATAGGGTTC +
Preference number: 5 (lower is better)
Translates to: QFILHICRIYKRNLSEENDTAGA*EGRIGF
Trigger: GAACCCTATTCTACCCTCCAAAGCCCCTGCGGTATC...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACACTGAGCTGTCCTTGTaGCAGAGTGAGGTTGCCCCT +
Preference number: 5 (lower is better)
Translates to: QFILHICRIYKRNLSEENTELSL*QSEVAP
Trigger: AGGGGCAACCTCACTCTGCAACAAGGACAGCTCAGT...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACGCCAGCTTTCCTGTCTaGCTGACTGAAGCCCATGGT +
Preference number: 5 (lower is better)
Translates to: QFILHICRIYKRNLSEENASFPV*LTEAHG
Trigger: ACCATGGGCTTCAGTCAGCAAGACAGGAAAGCTGGC...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATATGTGCTCCATCCATTaGGTCCCTGCCGGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNMCSIH*VPAGFL
Trigger: GAGAAACCCGGCAGGGACCAAATGGATGGAGCACAT...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATTTGTCCGCTTCCTCCTaGACTAGGGTTGTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNLSASS*TRVVPS
Trigger: GGAAGGAACAACCCTAGTCAAGGAGGAAGCGGACAA...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACATGCACAAGCTGATCTaGGGTGTCGAACTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: QFILHICRIYKRNLSEENMHKLI*GVELSG
Trigger: ACCAGAGAGTTCGACACCCAAGATCAGCTTGTGCAT...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACGCATTAGAGAAAGCCTaGTTGCAGCCCTCATGCTCA +
Preference number: 5 (lower is better)
Translates to: QFILHICRIYKRNLSEENALEKA*LQPSCS
Trigger: TGAGCATGAGGGCTGCAACAAGGCTTTCTCTAATGC...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATCGCTTTGAGGTAGTGTaGCTCAGCTCCTTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNRFEVV*LSSFCS
Trigger: TGAGCAGAAGGAGCTGAGCAACACTACCTCAAAGCG...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp AGTGACCAAATGATCATTCTTGAACTGGACTATCAGGACAGATTGGTGAAATCTGTATCCCTGTCCCATTaGATCTTGGGTTTGCATGCC +
Preference number: 5 (lower is better)
Translates to: SDQMIILELDYQDRLVKSVSLSH*ILGLHA
Trigger: GGCATGCAAACCCAAGATCAAATGGGACAGGGATAC...AGATTTCACCAATCTGTCCTGATAGTCCAGTTCAAGAATGATCATTTGGTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp CAGTTTATTTTACACATCTGCAGGATATACAAGCGTAACTTGTCAGAGGAGAACTGCTTGCTTTCATCTTaGTCCGCTTCCTCCTTGACT +
Preference number: 5 (lower is better)
Translates to: QFILHICRIYKRNLSEENCLLSS*SASSLT
Trigger: AGTCAAGGAGGAAGCGGACAAAGATGAAAGCAAGCA...GTTCTCCTCTGACAAGTTACGCTTGTATATCCTGCAGATGTGTAAAATAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp GGCTGCTTAAATACCTACTTAGAGCTATGTATAGTCAATTCAATTCTCAGTTACGGCTCATGGGCTACTTaGCTGTCTTCAGAGATGCCA +
Preference number: 5 (lower is better)
Translates to: GCLNTYLELCIVNSILSYGSWAT*LSSEMP
Trigger: TGGCATCTCTGAAGACAGCAAAGTAGCCCATGAGCC...GTAACTGAGAATTGAATTGACTATACATAGCTCTAAGTAGGTATTTAAGCAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp GGCTGCTTAAATACCTACTTAGAGCTATGTATAGTCAATTCAATTCTCAGTTACGATGTCTGGCATCAATaGGTACAGGAGGATGGAAGG +
Preference number: 5 (lower is better)
Translates to: GCLNTYLELCIVNSILSYDVWHQ*VQEDGR
Trigger: CCTTCCATCCTCCTGTACCAATTGATGCCAGACATC...GTAACTGAGAATTGAATTGACTATACATAGCTCTAAGTAGGTATTTAAGCAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp GGCTGCTTAAATACCTACTTAGAGCTATGTATAGTCAATTCAATTCTCAGTTACACTTCAGGCTCCTGCTaGCTTTCATCTTTGTCCGCT +
Preference number: 5 (lower is better)
Translates to: GCLNTYLELCIVNSILSYTSGSC*LSSLSA
Trigger: AGCGGACAAAGATGAAAGCAAGCAGGAGCCTGAAGT...GTAACTGAGAATTGAATTGACTATACATAGCTCTAAGTAGGTATTTAAGCAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATAACATGTACTGGGCTTaGAACGGTTTCTGCTCTCGT +
Preference number: 5 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNNMYWA*NGFCSR
Trigger: ACGAGAGCAGAAACCGTTCAAAGCCCAGTACATGTT...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATCTGATAGTGCTGGTATaGCTGTCTCTCCTGTTGAGT +
Preference number: 5 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNLIVLV*LSLLLS
Trigger: ACTCAACAGGAGAGACAGCAATACCAGCACTATCAG...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATAGGTCTTCATCAGGCTaGATCTTGGACCGCTTATTA +
Preference number: 5 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNRSSSG*ILDRLL
Trigger: TAATAAGCGGTCCAAGATCAAGCCTGATGAAGACCT...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp AGTGACCAAATGATCATTCTTGAACTGGACTATCAGGACAGATTGGTGAAATCTGTCTTGAGTAGGCTTTaGTGCAACCTTCAAATGTAC +
Preference number: 5 (lower is better)
Translates to: SDQMIILELDYQDRLVKSVLSRL*CNLQMY
Trigger: GTACATTTGAAGGTTGCACAAAAGCCTACTCAAGAC...AGATTTCACCAATCTGTCCTGATAGTCCAGTTCAAGAATGATCATTTGGTCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp CAAGAAAGGTCAGATAGTGAGTGGAAACATCAACTCCAAAAATCTAAAGGCAATCATTTGATCTTGGGTTaGCATGCCATTCACTGTGTT +
Preference number: 5 (lower is better)
Translates to: QERSDSEWKHQLQKSKGNHLILG*HAIHCV
Trigger: AACACAGTGAATGGCATGCAAACCCAAGATCAAATG...ATTGCCTTTAGATTTTTGGAGTTGATGTTTCCACTCACTATCTGACCTTTCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS-3UTR CAA 90 bp GGCTGCTTAAATACCTACTTAGAGCTATGTATAGTCAATTCAATTCTCAGTTACACATACGGTTTCTCATaGGAATGTGTTCTGTTTTGG +
Preference number: 5 (lower is better)
Translates to: GCLNTYLELCIVNSILSYTYGFS*ECVLFW
Trigger: CCAAAACAGAACACATTCCAATGAGAAACCGTATGT...GTAACTGAGAATTGAATTGACTATACATAGCTCTAAGTAGGTATTTAAGCAGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS TCA 72 bp TGCTCCCTGAGTTGGCCGGCCAGGGGACCTGGACTGTaGATGGCTGCCGGAATCTCTCGGGGGTGGAGGCCG +
Preference number: 6 (lower is better)
Translates to: CSLSWPARGPGL*MAAGISRGWRP
Trigger: CGGCCTCCACCCCCGAGAGATTCCGGCAGCCATTCACAGTCCAGGTCCCCTGGCCGGCCAACTCAGGGAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 72 bp GAGTTGGCCGGCCAGGGGACCTGGACTGTGAATGGCTaGCGGAATCTCTCGGGGGTGGAGGCCGAGGGTGCA +
Preference number: 6 (lower is better)
Translates to: ELAGQGTWTVNG*RNLSGVEAEGA
Trigger: TGCACCCTCGGCCTCCACCCCCGAGAGATTCCGGCAGCCATTCACAGTCCAGGTCCCCTGGCCGGCCAACTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 72 bp CCTCGCTGGACCTGCGGCTGGAAAAGCAGGGGGAGATaGCCGAGGATCTGCGGCTGCTCAGGTAGGCAGAGC +
Preference number: 6 (lower is better)
Translates to: PRWTCGWKSRGR*PRICGCSGRQS
Trigger: GCTCTGCCTACCTGAGCAGCCGCAGATCCTCGGGCATCTCCCCCTGCTTTTCCAGCCGCAGGTCCAGCGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 72 bp GGGCAGAGGTGTGGGTGGTGGGCCACCTGTGGCAGCTaGATACTTGGCCTTAAGGCGGTACTGCTGCACGGG +
Preference number: 6 (lower is better)
Translates to: GQRCGWWATCGS*ILGLKAVLLHG
Trigger: CCCGTGCAGCAGTACCGCCTTAAGGCCAAGTATGCAGCTGCCACAGGTGGCCCACCACCCACACCTCTGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 72 bp GGTGTGAGGCTGAGCAGACTGGGCAGCCCGTCACCCTaGCTGGCCTCGCTGGACCTCCTTGAAGCATCTGTG +
Preference number: 6 (lower is better)
Translates to: GVRLSRLGSPSP*LASLDLLEASV
Trigger: CACAGATGCTTCAAGGAGGTCCAGCGAGGCCAGCCAGGGTGACGGGCTGCCCAGTCTGCTCAGCCTCACACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 72 bp GTGGCAGCTGCATACTTGGCCTTAAGGCGGTACTGCTaGACGGGTGTGAGGCTGAGCAGACTGGGCAGCCCG +
Preference number: 6 (lower is better)
Translates to: VAAAYLALRRYC*TGVRLSRLGSP
Trigger: CGGGCTGCCCAGTCTGCTCAGCCTCACACCCGTGCAGCAGTACCGCCTTAAGGCCAAGTATGCAGCTGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 72 bp ACCTCCCCCATCACTGCATCTTCGAGGAGGATGGACTaGAGGCAGGGTCACCCCAGAGTCCCTCCCTTCCCC +
Preference number: 6 (lower is better)
Translates to: TSPITASSRRMD*RQGHPRVPPFP
Trigger: GGGGAAGGGAGGGACTCTGGGGTGACCCTGCCTCCAGTCCATCCTCCTCGAAGATGCAGTGATGGGGGAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CAA 72 bp GGTGTGGGTGGTGGGCCACCTGTGGCAGCTGCATACTaGGCCTTAAGGCGGTACTGCTGCACGGGTGTGAGG +
Preference number: 6 (lower is better)
Translates to: GVGGGPPVAAAY*ALRRYCCTGVR
Trigger: CCTCACACCCGTGCAGCAGTACCGCCTTAAGGCCAAGTATGCAGCTGCCACAGGTGGCCCACCACCCACACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CAA 90 bp TGGGGCAGAGGTGTGGGTGGTGGGCCACCTGTGGCAGCTGCATACTaGGCCTTAAGGCGGTACTGCTGCACGGGTGTGAGGCTGAGCAGA +
Preference number: 6 (lower is better)
Translates to: WGRGVGGGPPVAAAY*ALRRYCCTGVRLSR
Trigger: TCTGCTCAGCCTCACACCCGTGCAGCAGTACCGCCTTAAGGCCAAGTATGCAGCTGCCACAGGTGGCCCACCACCCACACCTCTGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 72 bp CCTGTGGCAGCTGCATACTTGGCCTTAAGGCGGTACTaGTGCACGGGTGTGAGGCTGAGCAGACTGGGCAGC +
Preference number: 6 (lower is better)
Translates to: PVAAAYLALRRY*CTGVRLSRLGS
Trigger: GCTGCCCAGTCTGCTCAGCCTCACACCCGTGCAGCAGTACCGCCTTAAGGCCAAGTATGCAGCTGCCACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 72 bp GCTCAGCCTCTCCATGTGGGGCAGAGGTGTGGGTGGTaGGCCACCTGTGGCAGCTGCATACTTGGCCTTAAG +
Preference number: 6 (lower is better)
Translates to: AQPLHVGQRCGW*ATCGSCILGLK
Trigger: CTTAAGGCCAAGTATGCAGCTGCCACAGGTGGCCCACCACCCACACCTCTGCCCCACATGGAGAGGCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS TCA 72 bp TGGGCTTGCTCTGTGAGGACTCAGAAGGGCCAGAGCTaGCCTGGACGGGGTTCAGAACTGTCGGAATCCCAG +
Preference number: 6 (lower is better)
Translates to: WACSVRTQKGQS*PGRGSELSESQ
Trigger: CTGGGATTCCGACAGTTCTGAACCCCGTCCAGGTCAGCTCTGGCCCTTCTGAGTCCTCACAGAGCAAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS TCA 72 bp CAGGGCGGCTGGGCCCCTGGTGTTGCATGCTGCCACTaGGTAGCTGATGGGCAATGTATCCCTGTCCCATTT +
Preference number: 6 (lower is better)
Translates to: QGGWAPGVACCH*VADGQCIPVPF
Trigger: AAATGGGACAGGGATACATTGCCCATCAGCTACTCAGTGGCAGCATGCAACACCAGGGGCCCAGCCGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS TCA 72 bp ATATGTGAGGTAGCACCAACCTGCCCTAGTACCTGTTaGCCAGGGCGGCTGGGCCCCTGGTGTTGCATGCTG +
Preference number: 6 (lower is better)
Translates to: ICEVAPTCPSTC*PGRLGPWCCML
Trigger: CAGCATGCAACACCAGGGGCCCAGCCGCCCTGGTCAACAGGTACTAGGGCAGGTTGGTGCTACCTCACATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CAA 90 bp TCCTGCTGGCCCCGTGACCCTGGGCTGGGGAGGTCTTCATCAGGCTaGATCTTGGACCGCTTATTATGCATAGGGTCACCAGTGCTGCTC +
Preference number: 6 (lower is better)
Translates to: SCWPRDPGLGRSSSG*ILDRLLCIGSPVLL
Trigger: GAGCAGCACTGGTGACCCTATGCATAATAAGCGGTCCAAGATCAAGCCTGATGAAGACCTCCCCAGCCCAGGGTCACGGGGCCAGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS CAA 90 bp TGGCCCCGTGACCCTGGGCTGGGGAGGTCTTCATCAGGCTTGATCTaGGACCGCTTATTATGCATAGGGTCACCAGTGCTGCTCACTGCA +
Preference number: 6 (lower is better)
Translates to: WPRDPGLGRSSSGLI*DRLLCIGSPVLLTA
Trigger: TGCAGTGAGCAGCACTGGTGACCCTATGCATAATAAGCGGTCCAAGATCAAGCCTGATGAAGACCTCCCCAGCCCAGGGTCACGGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS TCA 72 bp CCTGTTGAGTGTGTTCAGCACTGTGAAGTCTACACCTaGCAGGTCACTTCTGCTCGGGAGGAGGGTCCCGGG +
Preference number: 6 (lower is better)
Translates to: PVECVQHCEVYT*QVTSAREEGPG
Trigger: CCCGGGACCCTCCTCCCGAGCAGAAGTGACCTGTCAGGTGTAGACTTCACAGTGCTGAACACACTCAACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS TCA 72 bp CATCCATGGTCAGAGCCTCCAGGGCAACATTCTCTGTaGTGCTGGGAGGGCAAGGGGATGCCTGGAAGTACC +
Preference number: 6 (lower is better)
Translates to: HPWSEPPGQHSL*CWEGKGMPGST
Trigger: GGTACTTCCAGGCATCCCCTTGCCCTCCCAGCATCACAGAGAATGTTGCCCTGGAGGCTCTGACCATGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS TCA 72 bp CCAAAACCCCGAGGCTGCTGTGCGCTAGGGCGCTGCTaGCCACACTTCAGCTTGGAGGATGACAGATCAGAA +
Preference number: 6 (lower is better)
Translates to: PKPRGCCALGRC*PHFSLEDDRSE
Trigger: TTCTGATCTGTCATCCTCCAAGCTGAAGTGTGGTCAGCAGCGCCCTAGCGCACAGCAGCCTCGGGGTTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 72 bp TCTCCCCGAGGGTCTGATATCCCCCAGCTGGGCCAGTaGCAACCTTCCACAGATTATGTGGGTGTACCACCA +
Preference number: 6 (lower is better)
Translates to: SPRGSDIPQLGQ*QPSTDYVGVPP
Trigger: TGGTGGTACACCCACATAATCTGTGGAAGGTTGGCACTGGCCCAGCTGGGGGATATCAGACCCTCGGGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 72 bp GGTAGTGAGGCTCCATGTAGCCATTCCGGGGATCCATaGCAAACACAGTCCCACGGTAAGGGAGAGAGGGCT +
Preference number: 6 (lower is better)
Translates to: GSEAPCSHSGDP*QTQSHGKGERA
Trigger: AGCCCTCTCTCCCTTACCGTGGGACTGTGTTTGCCATGGATCCCCGGAATGGCTACATGGAGCCTCACTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS CCA 72 bp GAAGGTACTCCATATGGATGGCCCCTGCACCAGCAGTaGCAGCTGAGGGAAGGATGTCTGCATAAGGGCTGC +
Preference number: 6 (lower is better)
Translates to: EGTPYGWPLHQQ*QLREGCLHKGC
Trigger: GCAGCCCTTATGCAGACATCCTTCCCTCAGCTGCCACTGCTGGTGCAGGGGCCATCCATATGGAGTACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS CAA 90 bp AGAGAGGGCTCCGCCAGATGTGGTAGAGAGCCATGGATCTCTTTCTaGATCAGCGAGGCCCTCTCATCACTAGACGTCGAGGGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: REGSARCGREPWISF*ISEALSSLDVEGSS
Trigger: TGAGGAGCCCTCGACGTCTAGTGATGAGAGGGCCTCGCTGATCAAGAAAGAGATCCATGGCTCTCTACCACATCTGGCGGAGCCCTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS CAA 90 bp TCTGCAAGGGAGGTCAGCAAAGAACTCATATCCCCGATAGCCATGTaGGTGGTGCCCATGGATAGGGATGGGAATGGGAGGGATGCCCGC +
Preference number: 6 (lower is better)
Translates to: SAREVSKELISPIAM*VVPMDRDGNGRDAR
Trigger: GCGGGCATCCCTCCCATTCCCATCCCTATCCATGGGCACCACCAACATGGCTATCGGGGATATGAGTTCTTTGCTGACCTCCCTTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS TCA 72 bp AGCCTAGGGCTGGGAAATCTGGTGCTGTCCATGGCATaGAGGTACTCCATATGGATGGCCCCTGCACCAGCA +
Preference number: 6 (lower is better)
Translates to: SLGLGNLVLSMA*RYSIWMAPAPA
Trigger: TGCTGGTGCAGGGGCCATCCATATGGAGTACCTTCATGCCATGGACAGCACCAGATTTCCCAGCCCTAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS GCA 72 bp CTGCACGGTAGAGCAGAGCTGCTGGGACTGACCTTGTaGCTCCATTTTGATGCTGTTCACCCTGCTGCTCTG +
Preference number: 6 (lower is better)
Translates to: LHGRAELLGLTL*LHFDAVHPAAL
Trigger: CAGAGCAGCAGGGTGAACAGCATCAAAATGGAGGCACAAGGTCAGTCCCAGCAGCTCTGCTCTACCGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 72 bp GGGAGAGAGGGCTCCGCCAGATGTGGTAGAGAGCCATaGATCTCTTTCTTGATCAGCGAGGCCCTCTCATCA +
Preference number: 6 (lower is better)
Translates to: GREGSARCGREP*ISFLISEALSS
Trigger: TGATGAGAGGGCCTCGCTGATCAAGAAAGAGATCCATGGCTCTCTACCACATCTGGCGGAGCCCTCTCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS CCA 72 bp GGGATAGGTCTCTGTGTTGGAAATGTTGGAGCAGGGTaGATGAGAGGAGGGCTGTGTCCGAATGCGGAGCCT +
Preference number: 6 (lower is better)
Translates to: GIGLCVGNVGAG*MRGGLCPNAEP
Trigger: AGGCTCCGCATTCGGACACAGCCCTCCTCTCATCCACCCTGCTCCAACATTTCCAACACAGAGACCTATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS CCA 72 bp TTGCTCTGTGAGGACTCAGAAGGGCCAGAGCTGACCTaGACGGGGTTCAGAACTGTCGGAATCCCAGGGATA +
Preference number: 6 (lower is better)
Translates to: LLCEDSEGPELT*TGFRTVGIPGI
Trigger: TATCCCTGGGATTCCGACAGTTCTGAACCCCGTCCAGGTCAGCTCTGGCCCTTCTGAGTCCTCACAGAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS CCA 72 bp TGTGCTCCATCCATTTGGTCCCTGCCGGGTTTCTCCTaGCTTGCAAAGCAAGGGCTGTGGTTGCCGTGGAAA +
Preference number: 6 (lower is better)
Translates to: CAPSIWSLPGFS*LAKQGLWLPWK
Trigger: TTTCCACGGCAACCACAGCCCTTGCTTTGCAAGCCAGGAGAAACCCGGCAGGGACCAAATGGATGGAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CAA 72 bp CCCCGTGACCCTGGGCTGGGGAGGTCTTCATCAGGCTaGATCTTGGACCGCTTATTATGCATAGGGTCACCA +
Preference number: 6 (lower is better)
Translates to: PRDPGLGRSSSG*ILDRLLCIGSP
Trigger: TGGTGACCCTATGCATAATAAGCGGTCCAAGATCAAGCCTGATGAAGACCTCCCCAGCCCAGGGTCACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS CAA 72 bp CTCCATCCATTTGGTCCCTGCCGGGTTTCTCCTGGCTaGCAAAGCAAGGGCTGTGGTTGCCGTGGAAATGGT +
Preference number: 6 (lower is better)
Translates to: LHPFGPCRVSPG*QSKGCGCRGNG
Trigger: ACCATTTCCACGGCAACCACAGCCCTTGCTTTGCAAGCCAGGAGAAACCCGGCAGGGACCAAATGGATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CAA 90 bp ATGACTTCAGGCTCCTGCTTGCTTTCATCTTTGTCCGCTTCCTCCTaGACTAGGGTTGTTCCTTCCGGCTGTTCCTGCTGGCCCCGTGAC +
Preference number: 6 (lower is better)
Translates to: MTSGSCLLSSLSASS*TRVVPSGCSCWPRD
Trigger: GTCACGGGGCCAGCAGGAACAGCCGGAAGGAACAACCCTAGTCAAGGAGGAAGCGGACAAAGATGAAAGCAAGCAGGAGCCTGAAGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS CAA 90 bp TCTGGCAGCCCTGCTAAGTCCAAGTCCTCTGGCTCATGGGCTACTTaGCTGTCTTCAGAGATGCCACTCTGCAACTGCTGCCCATACCCT +
Preference number: 6 (lower is better)
Translates to: SGSPAKSKSSGSWAT*LSSEMPLCNCCPYP
Trigger: AGGGTATGGGCAGCAGTTGCAGAGTGGCATCTCTGAAGACAGCAAAGTAGCCCATGAGCCAGAGGACTTGGACTTAGCAGGGCTGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS TCA 72 bp GCTATTGAGGCTGCTGAAGCGTTGAACCCTGGCAAGTaGCATGTTCTCCGAGACTGTCCTCACAGGGTCGCT +
Preference number: 6 (lower is better)
Translates to: AIEAAEALNPGK*HVLRDCPHRVA
Trigger: AGCGACCCTGTGAGGACAGTCTCGGAGAACATGTCACTTGCCAGGGTTCAACGCTTCAGCAGCCTCAATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 72 bp CGGGTTTCTCCTGGCTTGCAAAGCAAGGGCTGTGGTTaGCGTGGAAATGGTCGAGTCCATGATTGGGGTTTC +
Preference number: 6 (lower is better)
Translates to: RVSPGLQSKGCG*RGNGRVHDWGF
Trigger: GAAACCCCAATCATGGACTCGACCATTTCCACGGCAACCACAGCCCTTGCTTTGCAAGCCAGGAGAAACCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 72 bp CGGAATCCCAGGGATAGGTCTCTGTGTTGGAAATGTTaGAGCAGGGTGGATGAGAGGAGGGCTGTGTCCGAA +
Preference number: 6 (lower is better)
Translates to: RNPRDRSLCWKC*SRVDERRAVSE
Trigger: TTCGGACACAGCCCTCCTCTCATCCACCCTGCTCCAACATTTCCAACACAGAGACCTATCCCTGGGATTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS CCA 72 bp TCTGGCAGCCCTGCTAAGTCCAAGTCCTCTGGCTCATaGGCTACTTTGCTGTCTTCAGAGATGCCACTCTGC +
Preference number: 6 (lower is better)
Translates to: SGSPAKSKSSGS*ATLLSSEMPLC
Trigger: GCAGAGTGGCATCTCTGAAGACAGCAAAGTAGCCCATGAGCCAGAGGACTTGGACTTAGCAGGGCTGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 72 bp GCCAAGTCCATCCCCACTGTGGATTGCAAAGTGCTCTaGGCCATTGTAGGTACTGCTATTCTCCCCGAGGGT +
Preference number: 6 (lower is better)
Translates to: AKSIPTVDCKVL*AIVGTAILPEG
Trigger: ACCCTCGGGGAGAATAGCAGTACCTACAATGGCCCAGAGCACTTTGCAATCCACAGTGGGGATGGACTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CAA 72 bp GACCCTGGGCTGGGGAGGTCTTCATCAGGCTTGATCTaGGACCGCTTATTATGCATAGGGTCACCAGTGCTG +
Preference number: 6 (lower is better)
Translates to: DPGLGRSSSGLI*DRLLCIGSPVL
Trigger: CAGCACTGGTGACCCTATGCATAATAAGCGGTCCAAGATCAAGCCTGATGAAGACCTCCCCAGCCCAGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS CAA 72 bp GGCTCCTGCTTGCTTTCATCTTTGTCCGCTTCCTCCTaGACTAGGGTTGTTCCTTCCGGCTGTTCCTGCTGG +
Preference number: 6 (lower is better)
Translates to: GSCLLSSLSASS*TRVVPSGCSCW
Trigger: CCAGCAGGAACAGCCGGAAGGAACAACCCTAGTCAAGGAGGAAGCGGACAAAGATGAAAGCAAGCAGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS CAA 90 bp TTTGATGTGCTCCATCCATTTGGTCCCTGCCGGGTTTCTCCTGGCTaGCAAAGCAAGGGCTGTGGTTGCCGTGGAAATGGTCGAGTCCAT +
Preference number: 6 (lower is better)
Translates to: FDVLHPFGPCRVSPG*QSKGCGCRGNGRVH
Trigger: ATGGACTCGACCATTTCCACGGCAACCACAGCCCTTGCTTTGCAAGCCAGGAGAAACCCGGCAGGGACCAAATGGATGGAGCACATCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS TCA 72 bp TCAGAGGAAGCTCGAGCCCACTGTTGGAATAGTTGCTaGTGGGGGACTGTTGGCTGCTGCATGAAGACTGAC +
Preference number: 6 (lower is better)
Translates to: SEEARAHCWNSC*WGTVGCCMKTD
Trigger: GTCAGTCTTCATGCAGCAGCCAACAGTCCCCCATCAGCAACTATTCCAACAGTGGGCTCGAGCTTCCTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS TCA 72 bp GCTAGGGCGCTGCTGACCACACTTCAGCTTGGAGGATaGCAGATCAGAAGTTCCAGAACTGACCTCGTTCCA +
Preference number: 6 (lower is better)
Translates to: ARALLTTLQLGG*QIRSSRTDLVP
Trigger: TGGAACGAGGTCAGTTCTGGAACTTCTGATCTGTCATCCTCCAAGCTGAAGTGTGGTCAGCAGCGCCCTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS TCA 72 bp AGCAGAGCTGCTGGGACTGACCTTGTGCCTCCATTTTaGTGCTGTTCACCCTGCTGCTCTGACTCATGTCAC +
Preference number: 6 (lower is better)
Translates to: SRAAGTDLVPPF*CCSPCCSDSCH
Trigger: GTGACATGAGTCAGAGCAGCAGGGTGAACAGCATCAAAATGGAGGCACAAGGTCAGTCCCAGCAGCTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS TCA 72 bp GGAGTGGTGAGACGGGAGGAGCTGTGGGAAAGGTTCTaGATAATACTTGGGCTCAAGGCCCCTGACATTAGG +
Preference number: 6 (lower is better)
Translates to: GVVRREELWERF*IILGLKAPDIR
Trigger: CCTAATGTCAGGGGCCTTGAGCCCAAGTATTATTCAGAACCTTTCCCACAGCTCCTCCCGTCTCACCACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 72 bp CCTCTGGCTCATGGGCTACTTTGCTGTCTTCAGAGATaGCACTCTGCAACTGCTGCCCATACCCTGTTTGGT +
Preference number: 6 (lower is better)
Translates to: PLAHGLLCCLQR*HSATAAHTLFG
Trigger: ACCAAACAGGGTATGGGCAGCAGTTGCAGAGTGGCATCTCTGAAGACAGCAAAGTAGCCCATGAGCCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 72 bp CTGCTAAGTCCAAGTCCTCTGGCTCATGGGCTACTTTaGTGTCTTCAGAGATGCCACTCTGCAACTGCTGCC +
Preference number: 6 (lower is better)
Translates to: LLSPSPLAHGLL*CLQRCHSATAA
Trigger: GGCAGCAGTTGCAGAGTGGCATCTCTGAAGACAGCAAAGTAGCCCATGAGCCAGAGGACTTGGACTTAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 72 bp CAGAACTGTCGGAATCCCAGGGATAGGTCTCTGTGTTaGAAATGTTGGAGCAGGGTGGATGAGAGGAGGGCT +
Preference number: 6 (lower is better)
Translates to: QNCRNPRDRSLC*KCWSRVDERRA
Trigger: AGCCCTCCTCTCATCCACCCTGCTCCAACATTTCCAACACAGAGACCTATCCCTGGGATTCCGACAGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS CCA 72 bp GATGTCATGGGCTTCTCAGCCTTGACAGTCTTCACCTaGAGGCACTCTTCCCGCTTTGAGGTAGTGTTGCTC +
Preference number: 6 (lower is better)
Translates to: DVMGFSALTVFT*RHSSRFEVVLL
Trigger: GAGCAACACTACCTCAAAGCGGGAAGAGTGCCTCCAGGTGAAGACTGTCAAGGCTGAGAAGCCCATGACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 72 bp GGCTGTGGTTGCCGTGGAAATGGTCGAGTCCATGATTaGGGTTTCATCGATGGCACTGAGGTCTGCTACACT +
Preference number: 6 (lower is better)
Translates to: GCGCRGNGRVHD*GFIDGTEVCYT
Trigger: AGTGTAGCAGACCTCAGTGCCATCGATGAAACCCCAATCATGGACTCGACCATTTCCACGGCAACCACAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 72 bp CAGAGTTTTCAGTGCCATTCCCTTGGAGCAGGCAGTTaGCATCTGAGAGGGAGAACGAGCCAGCTTTCCTGT +
Preference number: 6 (lower is better)
Translates to: QSFQCHSLGAGS*HLRGRTSQLSC
Trigger: ACAGGAAAGCTGGCTCGTTCTCCCTCTCAGATGCCAACTGCCTGCTCCAAGGGAATGGCACTGAAAACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 72 bp GGGGAGAGTAACTCAGAGTTTTCAGTGCCATTCCCTTaGAGCAGGCAGTTGGCATCTGAGAGGGAGAACGAG +
Preference number: 6 (lower is better)
Translates to: GESNSEFSVPFP*SRQLASERENE
Trigger: CTCGTTCTCCCTCTCAGATGCCAACTGCCTGCTCCAAGGGAATGGCACTGAAAACTCTGAGTTACTCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CAA 72 bp TCCGCCAGATGTGGTAGAGAGCCATGGATCTCTTTCTaGATCAGCGAGGCCCTCTCATCACTAGACGTCGAG +
Preference number: 6 (lower is better)
Translates to: SARCGREPWISF*ISEALSSLDVE
Trigger: CTCGACGTCTAGTGATGAGAGGGCCTCGCTGATCAAGAAAGAGATCCATGGCTCTCTACCACATCTGGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS CAA 72 bp ATTCTGCACGGTAGAGCAGAGCTGCTGGGACTGACCTaGTGCCTCCATTTTGATGCTGTTCACCCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: ILHGRAELLGLT*CLHFDAVHPAA
Trigger: AGCAGCAGGGTGAACAGCATCAAAATGGAGGCACAAGGTCAGTCCCAGCAGCTCTGCTCTACCGTGCAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CAA 72 bp GAGGTCAGCAAAGAACTCATATCCCCGATAGCCATGTaGGTGGTGCCCATGGATAGGGATGGGAATGGGAGG +
Preference number: 6 (lower is better)
Translates to: EVSKELISPIAM*VVPMDRDGNGR
Trigger: CCTCCCATTCCCATCCCTATCCATGGGCACCACCAACATGGCTATCGGGGATATGAGTTCTTTGCTGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS TCA 72 bp CTTGACAGTCTTCACCTGGAGGCACTCTTCCCGCTTTaGGGTAGTGTTGCTCAGCTCCTTCTGCTCACCAAA +
Preference number: 6 (lower is better)
Translates to: LDSLHLEALFPL*GSVAQLLLLTK
Trigger: TTTGGTGAGCAGAAGGAGCTGAGCAACACTACCTCAAAGCGGGAAGAGTGCCTCCAGGTGAAGACTGTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 72 bp CCTTTCAAGTTTGATGTGCTCCATCCATTTGGTCCCTaGCGGGTTTCTCCTGGCTTGCAAAGCAAGGGCTGT +
Preference number: 6 (lower is better)
Translates to: PFKFDVLHPFGP*RVSPGLQSKGC
Trigger: ACAGCCCTTGCTTTGCAAGCCAGGAGAAACCCGGCAGGGACCAAATGGATGGAGCACATCAAACTTGAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CAA 90 bp ACCGGAATAATTCTGCACGGTAGAGCAGAGCTGCTGGGACTGACCTaGTGCCTCCATTTTGATGCTGTTCACCCTGCTGCTCTGACTCAT +
Preference number: 6 (lower is better)
Translates to: TGIILHGRAELLGLT*CLHFDAVHPAALTH
Trigger: ATGAGTCAGAGCAGCAGGGTGAACAGCATCAAAATGGAGGCACAAGGTCAGTCCCAGCAGCTCTGCTCTACCGTGCAGAATTATTCCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CAA 90 bp GGAGAACGAGCCAGCTTTCCTGTCTTGCTGACTGAAGCCCATGGTTaGGTCATAGAACTGACCGGAATAATTCTGCACGGTAGAGCAGAG +
Preference number: 6 (lower is better)
Translates to: GERASFPVLLTEAHG*VIELTGIILHGRAE
Trigger: CTCTGCTCTACCGTGCAGAATTATTCCGGTCAGTTCTATGACCAAACCATGGGCTTCAGTCAGCAAGACAGGAAAGCTGGCTCGTTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS TCA 72 bp GGCTCCTCACTGATTTTGTTGAGACCCTGCACACTCTaGGGCTGCATAGTGATTGCGTTTCTTCTCTCTCGG +
Preference number: 6 (lower is better)
Translates to: GSSLILLRPCTL*GCIVIAFLLSR
Trigger: CCGAGAGAGAAGAAACGCAATCACTATGCAGCCTCAGAGTGTGCAGGGTCTCAACAAAATCAGTGAGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS TCA 72 bp TGTGCCTCCATTTTGATGCTGTTCACCCTGCTGCTCTaGCTCATGTCACTGAGCTGTCCTTGTTGCAGAGTG +
Preference number: 6 (lower is better)
Translates to: CASILMLFTLLL*LMSLSCPCCRV
Trigger: CACTCTGCAACAAGGACAGCTCAGTGACATGAGTCAGAGCAGCAGGGTGAACAGCATCAAAATGGAGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 72 bp AGGTCTTCATCAGGCTTGATCTTGGACCGCTTATTATaGATAGGGTCACCAGTGCTGCTCACTGCAGACTCG +
Preference number: 6 (lower is better)
Translates to: RSSSGLILDRLL*IGSPVLLTADS
Trigger: CGAGTCTGCAGTGAGCAGCACTGGTGACCCTATGCATAATAAGCGGTCCAAGATCAAGCCTGATGAAGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS GCA 72 bp TCATGGGCTACTTTGCTGTCTTCAGAGATGCCACTCTaGAACTGCTGCCCATACCCTGTTTGGTTCTGGGAA +
Preference number: 6 (lower is better)
Translates to: SWATLLSSEMPL*NCCPYPVWFWE
Trigger: TTCCCAGAACCAAACAGGGTATGGGCAGCAGTTGCAGAGTGGCATCTCTGAAGACAGCAAAGTAGCCCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 72 bp GTCAGTGGCTGCCTGTTGAGCTGGCTCCCATACTGCTaGGTCTTAAAGGGCTGTTCATGGAAAGTATTTCCA +
Preference number: 6 (lower is better)
Translates to: VSGCLLSWLPYC*VLKGCSWKVFP
Trigger: TGGAAATACTTTCCATGAACAGCCCTTTAAGACCCAGCAGTATGGGAGCCAGCTCAACAGGCAGCCACTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CAA 72 bp CCAACCTTCCACAGATTATGTGGGTGTACCACCATATaGTTGTATAGCCCAAAACCCCGAGGCTGCTGTGCG +
Preference number: 6 (lower is better)
Translates to: PTFHRLCGCTTI*LYSPKPRGCCA
Trigger: CGCACAGCAGCCTCGGGGTTTTGGGCTATACAACAATATGGTGGTACACCCACATAATCTGTGGAAGGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CAA 90 bp GAGATGGATCATAATGGTAACGGCCCTCATGATGTCTGGCATCAATaGGTACAGGAGGATGGAAGGCAGGGAAAAGATGAGGAGGGTGGT +
Preference number: 6 (lower is better)
Translates to: EMDHNGNGPHDVWHQ*VQEDGRQGKDEEGG
Trigger: ACCACCCTCCTCATCTTTTCCCTGCCTTCCATCCTCCTGTACCAATTGATGCCAGACATCATGAGGGCCGTTACCATTATGATCCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS CAA 90 bp CCATTCACTTGTTTTAGCCTTTCAAGTTTGATGTGCTCCATCCATTaGGTCCCTGCCGGGTTTCTCCTGGCTTGCAAAGCAAGGGCTGTG +
Preference number: 6 (lower is better)
Translates to: PFTCFSLSSLMCSIH*VPAGFLLACKARAV
Trigger: CACAGCCCTTGCTTTGCAAGCCAGGAGAAACCCGGCAGGGACCAAATGGATGGAGCACATCAAACTTGAAAGGCTAAAACAAGTGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CAA 90 bp CATGGAAAGTATTTCCATTGGTGCCAAGTCCATCCCCACTGTGGATaGCAAAGTGCTCTGGGCCATTGTAGGTACTGCTATTCTCCCCGA +
Preference number: 6 (lower is better)
Translates to: HGKYFHWCQVHPHCG*QSALGHCRYCYSPR
Trigger: TCGGGGAGAATAGCAGTACCTACAATGGCCCAGAGCACTTTGCAATCCACAGTGGGGATGGACTTGGCACCAATGGAAATACTTTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CAA 90 bp CCATACTGCTGGGTCTTAAAGGGCTGTTCATGGAAAGTATTTCCATaGGTGCCAAGTCCATCCCCACTGTGGATTGCAAAGTGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: PYCWVLKGCSWKVFP*VPSPSPLWIAKCSG
Trigger: CCCAGAGCACTTTGCAATCCACAGTGGGGATGGACTTGGCACCAATGGAAATACTTTCCATGAACAGCCCTTTAAGACCCAGCAGTATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS TCA 72 bp TGTTGCCAGCTAACTCATTTGGTGCCACGGACAGGCTaGAATCTAGCAAACCCCCATTCTCTTGCAAGCTGT +
Preference number: 6 (lower is better)
Translates to: CCQLTHLVPRTG*NLANPHSLASC
Trigger: ACAGCTTGCAAGAGAATGGGGGTTTGCTAGATTTCAGCCTGTCCGTGGCACCAAATGAGTTAGCTGGCAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 72 bp GAAGTCAGTGGCTGCCTGTTGAGCTGGCTCCCATACTaGTGGGTCTTAAAGGGCTGTTCATGGAAAGTATTT +
Preference number: 6 (lower is better)
Translates to: EVSGCLLSWLPY*WVLKGCSWKVF
Trigger: AAATACTTTCCATGAACAGCCCTTTAAGACCCAGCAGTATGGGAGCCAGCTCAACAGGCAGCCACTGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 72 bp GAGATGGATCATAATGGTAACGGCCCTCATGATGTCTaGCATCAATTGGTACAGGAGGATGGAAGGCAGGGA +
Preference number: 6 (lower is better)
Translates to: EMDHNGNGPHDV*HQLVQEDGRQG
Trigger: TCCCTGCCTTCCATCCTCCTGTACCAATTGATGCCAGACATCATGAGGGCCGTTACCATTATGATCCATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS CCA 72 bp GACAGATCAGAAGTTCCAGAACTGACCTCGTTCCACTaGATGGGCAAATCAGTTTTACTGCCCTCAGAGCAG +
Preference number: 6 (lower is better)
Translates to: DRSEVPELTSFH*MGKSVLLPSEQ
Trigger: CTGCTCTGAGGGCAGTAAAACTGATTTGCCCATCCAGTGGAACGAGGTCAGTTCTGGAACTTCTGATCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 72 bp TGGCTCCCATACTGCTGGGTCTTAAAGGGCTGTTCATaGAAAGTATTTCCATTGGTGCCAAGTCCATCCCCA +
Preference number: 6 (lower is better)
Translates to: WLPYCWVLKGCS*KVFPLVPSPSP
Trigger: TGGGGATGGACTTGGCACCAATGGAAATACTTTCCATGAACAGCCCTTTAAGACCCAGCAGTATGGGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CAA 72 bp GCAGAGCTGATAGTGCTGGTATTGCTGTCTCTCCTGTaGAGTGTGTTCAGCACTGTGAAGTCTACACCTGAC +
Preference number: 6 (lower is better)
Translates to: AELIVLVLLSLL*SVFSTVKSTPD
Trigger: GTCAGGTGTAGACTTCACAGTGCTGAACACACTCAACAGGAGAGACAGCAATACCAGCACTATCAGCTCTGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CAA 72 bp GCCAGCTTTCCTGTCTTGCTGACTGAAGCCCATGGTTaGGTCATAGAACTGACCGGAATAATTCTGCACGGT +
Preference number: 6 (lower is better)
Translates to: ASFPVLLTEAHG*VIELTGIILHG
Trigger: ACCGTGCAGAATTATTCCGGTCAGTTCTATGACCAAACCATGGGCTTCAGTCAGCAAGACAGGAAAGCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 72 bp ATTTCCATTGGTGCCAAGTCCATCCCCACTGTGGATTaGAAAGTGCTCTGGGCCATTGTAGGTACTGCTATT +
Preference number: 6 (lower is better)
Translates to: ISIGAKSIPTVD*KVLWAIVGTAI
Trigger: AATAGCAGTACCTACAATGGCCCAGAGCACTTTGCAATCCACAGTGGGGATGGACTTGGCACCAATGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 72 bp ATAATGGTAACGGCCCTCATGATGTCTGGCATCAATTaGTACAGGAGGATGGAAGGCAGGGAAAAGATGAGG +
Preference number: 6 (lower is better)
Translates to: IMVTALMMSGIN*YRRMEGREKMR
Trigger: CCTCATCTTTTCCCTGCCTTCCATCCTCCTGTACCAATTGATGCCAGACATCATGAGGGCCGTTACCATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS CCA 72 bp CCACTCTGCAACTGCTGCCCATACCCTGTTTGGTTCTaGGAATTTAAATACTGTACCACATCATCTGGCAGG +
Preference number: 6 (lower is better)
Translates to: PLCNCCPYPVWF*EFKYCTTSSGR
Trigger: CCTGCCAGATGATGTGGTACAGTATTTAAATTCCCAGAACCAAACAGGGTATGGGCAGCAGTTGCAGAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CAA 72 bp CATAATGGTAACGGCCCTCATGATGTCTGGCATCAATaGGTACAGGAGGATGGAAGGCAGGGAAAAGATGAG +
Preference number: 6 (lower is better)
Translates to: HNGNGPHDVWHQ*VQEDGRQGKDE
Trigger: CTCATCTTTTCCCTGCCTTCCATCCTCCTGTACCAATTGATGCCAGACATCATGAGGGCCGTTACCATTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000110510.4
ENSMUST00000130065.8
CDS CAA 72 bp TGTTTTAGCCTTTCAAGTTTGATGTGCTCCATCCATTaGGTCCCTGCCGGGTTTCTCCTGGCTTGCAAAGCA +
Preference number: 6 (lower is better)
Translates to: CFSLSSLMCSIH*VPAGFLLACKA
Trigger: TGCTTTGCAAGCCAGGAGAAACCCGGCAGGGACCAAATGGATGGAGCACATCAAACTTGAAAGGCTAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CAA 72 bp GTGCCATTTCCTATGAGAGGAGATACCGCAGGGGCTTaGGAGGGTAGAATAGGGTTCAGTCTTGGAAACATT +
Preference number: 6 (lower is better)
Translates to: VPFPMRGDTAGA*EGRIGFSLGNI
Trigger: AATGTTTCCAAGACTGAACCCTATTCTACCCTCCAAAGCCCCTGCGGTATCTCCTCTCATAGGAAATGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CAA 72 bp TATTTCCATTGGTGCCAAGTCCATCCCCACTGTGGATaGCAAAGTGCTCTGGGCCATTGTAGGTACTGCTAT +
Preference number: 6 (lower is better)
Translates to: YFHWCQVHPHCG*QSALGHCRYCY
Trigger: ATAGCAGTACCTACAATGGCCCAGAGCACTTTGCAATCCACAGTGGGGATGGACTTGGCACCAATGGAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CAA 90 bp TTGGACTGTGTGCCATTTCCTATGAGAGGAGATACCGCAGGGGCTTaGGAGGGTAGAATAGGGTTCAGTCTTGGAAACATTCCATTCACT +
Preference number: 6 (lower is better)
Translates to: LDCVPFPMRGDTAGA*EGRIGFSLGNIPFT
Trigger: AGTGAATGGAATGTTTCCAAGACTGAACCCTATTCTACCCTCCAAAGCCCCTGCGGTATCTCCTCTCATAGGAAATGGCACACAGTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS TCA 72 bp TCAGCTTGGAGGATGACAGATCAGAAGTTCCAGAACTaGCCTCGTTCCACTGGATGGGCAAATCAGTTTTAC +
Preference number: 6 (lower is better)
Translates to: SAWRMTDQKFQN*PRSTGWANQFY
Trigger: GTAAAACTGATTTGCCCATCCAGTGGAACGAGGTCAGTTCTGGAACTTCTGATCTGTCATCCTCCAAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 72 bp GCTACTTTGCTGTCTTCAGAGATGCCACTCTGCAACTaGTGCCCATACCCTGTTTGGTTCTGGGAATTTAAA +
Preference number: 6 (lower is better)
Translates to: ATLLSSEMPLCN*CPYPVWFWEFK
Trigger: TTTAAATTCCCAGAACCAAACAGGGTATGGGCAGCAGTTGCAGAGTGGCATCTCTGAAGACAGCAAAGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CAA 72 bp TGGGTCTTAAAGGGCTGTTCATGGAAAGTATTTCCATaGGTGCCAAGTCCATCCCCACTGTGGATTGCAAAG +
Preference number: 6 (lower is better)
Translates to: WVLKGCSWKVFP*VPSPSPLWIAK
Trigger: CTTTGCAATCCACAGTGGGGATGGACTTGGCACCAATGGAAATACTTTCCATGAACAGCCCTTTAAGACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 72 bp ATTCCATTCACTTGTTTTAGCCTTTCAAGTTTGATGTaGTCCATCCATTTGGTCCCTGCCGGGTTTCTCCTG +
Preference number: 6 (lower is better)
Translates to: IPFTCFSLSSLM*SIHLVPAGFLL
Trigger: CAGGAGAAACCCGGCAGGGACCAAATGGATGGAGCACATCAAACTTGAAAGGCTAAAACAAGTGAATGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 72 bp ACTTTGCTGTCTTCAGAGATGCCACTCTGCAACTGCTaGCCATACCCTGTTTGGTTCTGGGAATTTAAATAC +
Preference number: 6 (lower is better)
Translates to: TLLSSEMPLCNC*PYPVWFWEFKY
Trigger: GTATTTAAATTCCCAGAACCAAACAGGGTATGGGCAGCAGTTGCAGAGTGGCATCTCTGAAGACAGCAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 72 bp CAATGTATCCCTGTCCCATTTGATCTTGGGTTTGCATaGCATTCACTGTGTTGCCAGCTAACTCATTTGGTG +
Preference number: 6 (lower is better)
Translates to: QCIPVPFDLGFA*HSLCCQLTHLV
Trigger: CACCAAATGAGTTAGCTGGCAACACAGTGAATGGCATGCAAACCCAAGATCAAATGGGACAGGGATACATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CCA 72 bp GAGATGCCACTCTGCAACTGCTGCCCATACCCTGTTTaGTTCTGGGAATTTAAATACTGTACCACATCATCT +
Preference number: 6 (lower is better)
Translates to: EMPLCNCCPYPV*FWEFKYCTTSS
Trigger: AGATGATGTGGTACAGTATTTAAATTCCCAGAACCAAACAGGGTATGGGCAGCAGTTGCAGAGTGGCATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS TCA 72 bp ATGGCATCAAAATCAATCTGCACACCTTCTAGGTCATaGCTCTCAAAGCTGTCAACTGTGCTTGTTACCTGG +
Preference number: 6 (lower is better)
Translates to: MASKSICTPSRS*LSKLSTVLVTW
Trigger: CCAGGTAACAAGCACAGTTGACAGCTTTGAGAGTCATGACCTAGAAGGTGTGCAGATTGATTTTGATGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS GCA 72 bp ACATACGGTTTCTCATTGGAATGTGTTCTGTTTTGGTaGTTGGCCCGATCTGAAGCATTAGAGAAAGCCTTG +
Preference number: 6 (lower is better)
Translates to: TYGFSLECVLFW*LARSEALEKAL
Trigger: CAAGGCTTTCTCTAATGCTTCAGATCGGGCCAAGCACCAAAACAGAACACATTCCAATGAGAAACCGTATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4
CDS CAA 72 bp TACGGTTTCTCATTGGAATGTGTTCTGTTTTGGTGCTaGGCCCGATCTGAAGCATTAGAGAAAGCCTTGTTG +
Preference number: 6 (lower is better)
Translates to: YGFSLECVLFWC*ARSEALEKALL
Trigger: CAACAAGGCTTTCTCTAATGCTTCAGATCGGGCCAAGCACCAAAACAGAACACATTCCAATGAGAAACCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110510.4