RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GLG1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000003316

Ensembl transcript IDs: ENSMUST00000003404.9, ENSMUST00000164283.8, ENSMUST00000168741.8, ENSMUST00000169020.8

Found 486 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGGAAGAGGATGGCTGGGCCCCTGCTGGCTGTGCACCCAGGCCTaGTTCAGACTCTGCTCCCTCCCTAGTCCGCTTCCACTGACACAG +
Preference number: 1 (lower is better)
Translates to: GGRGWLGPCWLCTQA*FRLCSLPSPLPLTQ
Trigger: CTGTGTCAGTGGAAGCGGACTAGGGAGGGAGCAGAGTCTGAAGCAGGCCTGGGTGCACAGCCAGCAGGGGCCCAGCCATCCTCTTCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR CCA 90 bp TATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTTGGTaGTCAGGCCTGCGCCTCTACCTGTCCTTCAGCTCTCGTGTCACT +
Preference number: 1 (lower is better)
Translates to: YTGRLYRRARAVAPW*SGLRLYLSFSSRVT
Trigger: AGTGACACGAGAGCTGAAGGACAGGTAGAGGCGCAGGCCTGACCACCAAGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR CCA 90 bp AGAGGGTACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTaGCTCCTTGGTGGTCAGGCCTGCGCCTCTACCTGTCCTTCAGCT +
Preference number: 1 (lower is better)
Translates to: RGYTIQDGCTGGPGR*LLGGQACASTCPSA
Trigger: AGCTGAAGGACAGGTAGAGGCGCAGGCCTGACCACCAAGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTACCCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR GCA 90 bp GAGGCAGCTCTATCCCATCTTGGAGGAAGAGGATGGCTGGGCCCCTaGTGGCTGTGCACCCAGGCCTGCTTCAGACTCTGCTCCCTCCCT +
Preference number: 1 (lower is better)
Translates to: EAALSHLGGRGWLGP*WLCTQACFRLCSLP
Trigger: AGGGAGGGAGCAGAGTCTGAAGCAGGCCTGGGTGCACAGCCAGCAGGGGCCCAGCCATCCTCTTCCTCCAAGATGGGATAGAGCTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR CCA 90 bp GCAAGGGCAGCTGGGAGGAGGAGGAGGAGGAGGACACCGAGGACATaGCCAAGTCTGGATGGGAAGATGCAGTGGGCACCTGATGCTGCT +
Preference number: 1 (lower is better)
Translates to: ARAAGRRRRRRTPRT*PSLDGKMQWAPDAA
Trigger: AGCAGCATCAGGTGCCCACTGCATCTTCCCATCCAGACTTGGCCATGTCCTCGGTGTCCTCCTCCTCCTCCTCCTCCCAGCTGCCCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000164283.8
ENSMUST00000168741.8
ENSMUST00000169020.8
3UTR GCA 90 bp GCAGGTAAACCTTCGCCAACAAAAGCTACCACCAAAGCAGCCAGCTaGCGACGCTGCAAGGGCAGCTGGGAGGAGGAGGAGGAGGAGGAC +
Preference number: 1 (lower is better)
Translates to: AGKPSPTKATTKAAS*RRCKGSWEEEEEED
Trigger: GTCCTCCTCCTCCTCCTCCTCCCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGGCGAAGGTTTACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000164283.8
ENSMUST00000168741.8
ENSMUST00000169020.8
3UTR GCA 90 bp GCCACTGTGACACCATGGCCCAAACTCGCCAAAGGGGAACTGCAGTaGCTGGGCTCCTCCCTCCTATGCTCCGGCCCTGTCATCTTCACA +
Preference number: 1 (lower is better)
Translates to: ATVTPWPKLAKGELQ*LGSSLLCSGPVIFT
Trigger: TGTGAAGATGACAGGGCCGGAGCATAGGAGGGAGGAGCCCAGGCACTGCAGTTCCCCTTTGGCGAGTTTGGGCCATGGTGTCACAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR GCA 90 bp ACAGAGCCTGCACAGAACGCATCTCAGGAAGACACATGGCTCCAGTaGGGCAGCAGCTGTAGGTGCATATGGGAGGCAGGAGCAGGGCGG +
Preference number: 1 (lower is better)
Translates to: TEPAQNASQEDTWLQ*GSSCRCIWEAGAGR
Trigger: CCGCCCTGCTCCTGCCTCCCATATGCACCTACAGCTGCTGCCGCACTGGAGCCATGTGTCTTCCTGAGATGCGTTCTGTGCAGGCTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR CCA 90 bp CTGGGAGGAGGAGGAGGAGGAGGACACCGAGGACATGGCCAAGTCTaGATGGGAAGATGCAGTGGGCACCTGATGCTGCTCTACTGTGGG +
Preference number: 1 (lower is better)
Translates to: LGGGGGGGHRGHGQV*MGRCSGHLMLLYCG
Trigger: CCCACAGTAGAGCAGCATCAGGTGCCCACTGCATCTTCCCATCCAGACTTGGCCATGTCCTCGGTGTCCTCCTCCTCCTCCTCCTCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000164283.8
ENSMUST00000168741.8
ENSMUST00000169020.8
3UTR TCA 90 bp ACCGAGGACATGGCCAAGTCTGGATGGGAAGATGCAGTGGGCACCTaGTGCTGCTCTACTGTGGGTGTCAGTGCCACCGTTAGAGGGCGC +
Preference number: 1 (lower is better)
Translates to: TEDMAKSGWEDAVGT*CCSTVGVSATVRGR
Trigger: GCGCCCTCTAACGGTGGCACTGACACCCACAGTAGAGCAGCATCAGGTGCCCACTGCATCTTCCCATCCAGACTTGGCCATGTCCTCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000164283.8
ENSMUST00000168741.8
ENSMUST00000169020.8
3UTR GCA 90 bp GGAGGAGGAGGACACCGAGGACATGGCCAAGTCTGGATGGGAAGATaGAGTGGGCACCTGATGCTGCTCTACTGTGGGTGTCAGTGCCAC +
Preference number: 1 (lower is better)
Translates to: GGGGHRGHGQVWMGR*SGHLMLLYCGCQCH
Trigger: GTGGCACTGACACCCACAGTAGAGCAGCATCAGGTGCCCACTGCATCTTCCCATCCAGACTTGGCCATGTCCTCGGTGTCCTCCTCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000164283.8
ENSMUST00000168741.8
ENSMUST00000169020.8
3UTR TCA 90 bp CCCAGGCCTGCTTCAGACTCTGCTCCCTCCCTAGTCCGCTTCCACTaGCACAGAGAGGCTCACATCTGCACTGAAGTGGGCGACACAGAA +
Preference number: 1 (lower is better)
Translates to: PRPASDSAPSLVRFH*HREAHICTEVGDTE
Trigger: TTCTGTGTCGCCCACTTCAGTGCAGATGTGAGCCTCTCTGTGTCAGTGGAAGCGGACTAGGGAGGGAGCAGAGTCTGAAGCAGGCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR GCA 90 bp AGCTGCTTGCGGCACTTGAGTGATACTCGGTGCTCCTTGGCCTCCTaGAGAGTGTCGTTGCGCACAGTGGTGCTCAGGCAGATCACTACG +
Preference number: 1 (lower is better)
Translates to: SCLRHLSDTRCSLAS*RVSLRTVVLRQITT
Trigger: CGTAGTGATCTGCCTGAGCACCACTGTGCGCAACGACACTCTGCAGGAGGCCAAGGAGCACCGAGTATCACTCAAGTGCCGCAAGCAGCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR GCA 90 bp AGCTCTTCCACACGAAGCTGCTTGCGGCACTTGAGTGATACTCGGTaGTCCTTGGCCTCCTGCAGAGTGTCGTTGCGCACAGTGGTGCTC +
Preference number: 1 (lower is better)
Translates to: SSSTRSCLRHLSDTR*SLASCRVSLRTVVL
Trigger: GAGCACCACTGTGCGCAACGACACTCTGCAGGAGGCCAAGGAGCACCGAGTATCACTCAAGTGCCGCAAGCAGCTTCGTGTGGAAGAGCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR CCA 90 bp ATCAAGATGAGGCAGCTCTATCCCATCTTGGAGGAAGAGGATGGCTaGGCCCCTGCTGGCTGTGCACCCAGGCCTGCTTCAGACTCTGCT +
Preference number: 1 (lower is better)
Translates to: IKMRQLYPILEEEDG*APAGCAPRPASDSA
Trigger: AGCAGAGTCTGAAGCAGGCCTGGGTGCACAGCCAGCAGGGGCCCAGCCATCCTCTTCCTCCAAGATGGGATAGAGCTGCCTCATCTTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR CCA 90 bp GTTCATCAAGATGAGGCAGCTCTATCCCATCTTGGAGGAAGAGGATaGCTGGGCCCCTGCTGGCTGTGCACCCAGGCCTGCTTCAGACTC +
Preference number: 1 (lower is better)
Translates to: VHQDEAALSHLGGRG*LGPCWLCTQACFRL
Trigger: GAGTCTGAAGCAGGCCTGGGTGCACAGCCAGCAGGGGCCCAGCCATCCTCTTCCTCCAAGATGGGATAGAGCTGCCTCATCTTGATGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR CCA 90 bp TCTCCTACTGTACATGCCACCCTCTGTACAGCCACTGTGACACCATaGCCCAAACTCGCCAAAGGGGAACTGCAGTGCCTGGGCTCCTCC +
Preference number: 1 (lower is better)
Translates to: SPTVHATLCTATVTP*PKLAKGELQCLGSS
Trigger: GGAGGAGCCCAGGCACTGCAGTTCCCCTTTGGCGAGTTTGGGCCATGGTGTCACAGTGGCTGTACAGAGGGTGGCATGTACAGTAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR TCA 90 bp TGTCATCTCCAGCTCTTCCACACGAAGCTGCTTGCGGCACTTGAGTaGTACTCGGTGCTCCTTGGCCTCCTGCAGAGTGTCGTTGCGCAC +
Preference number: 1 (lower is better)
Translates to: CHLQLFHTKLLAALE*YSVLLGLLQSVVAH
Trigger: GTGCGCAACGACACTCTGCAGGAGGCCAAGGAGCACCGAGTATCACTCAAGTGCCGCAAGCAGCTTCGTGTGGAAGAGCTGGAGATGACA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR TCA 90 bp CCTCTGTCATCTCCAGCTCTTCCACACGAAGCTGCTTGCGGCACTTaGGTGATACTCGGTGCTCCTTGGCCTCCTGCAGAGTGTCGTTGC +
Preference number: 1 (lower is better)
Translates to: PLSSPALPHEAACGT*VILGAPWPPAECRC
Trigger: GCAACGACACTCTGCAGGAGGCCAAGGAGCACCGAGTATCACTCAAGTGCCGCAAGCAGCTTCGTGTGGAAGAGCTGGAGATGACAGAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR TCA 90 bp AATCTCACTCGCTTATCTTCCAGGGCCTCCATCAGGCAGGACATCTaGCGCCCGCGGCCAGGGGTGATGGCTGCACAGTGGTGTTTAATG +
Preference number: 1 (lower is better)
Translates to: NLTRLSSRASIRQDI*RPRPGVMAAQWCLM
Trigger: CATTAAACACCACTGTGCAGCCATCACCCCTGGCCGCGGGCGTCAGATGTCCTGCCTGATGGAGGCCCTGGAAGATAAGCGAGTGAGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR GCA 90 bp CTCCATCAGGCAGGACATCTGACGCCCGCGGCCAGGGGTGATGGCTaGACAGTGGTGTTTAATGTCCAAGGCACATGCTGTGTGAAGAAC +
Preference number: 1 (lower is better)
Translates to: LHQAGHLTPAARGDG*TVVFNVQGTCCVKN
Trigger: GTTCTTCACACAGCATGTGCCTTGGACATTAAACACCACTGTGCAGCCATCACCCCTGGCCGCGGGCGTCAGATGTCCTGCCTGATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR CCA 90 bp AGTCTGGATGGGAAGATGCAGTGGGCACCTGATGCTGCTCTACTGTaGGTGTCAGTGCCACCGTTAGAGGGCGCAGTGAGAGGGTACACT +
Preference number: 1 (lower is better)
Translates to: SLDGKMQWAPDAALL*VSVPPLEGAVRGYT
Trigger: AGTGTACCCTCTCACTGCGCCCTCTAACGGTGGCACTGACACCCACAGTAGAGCAGCATCAGGTGCCCACTGCATCTTCCCATCCAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000164283.8
ENSMUST00000168741.8
ENSMUST00000169020.8
3UTR CCA 90 bp AGGAGGACACCGAGGACATGGCCAAGTCTGGATGGGAAGATGCAGTaGGCACCTGATGCTGCTCTACTGTGGGTGTCAGTGCCACCGTTA +
Preference number: 1 (lower is better)
Translates to: RRTPRTWPSLDGKMQ*APDAALLWVSVPPL
Trigger: TAACGGTGGCACTGACACCCACAGTAGAGCAGCATCAGGTGCCCACTGCATCTTCCCATCCAGACTTGGCCATGTCCTCGGTGTCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000164283.8
ENSMUST00000168741.8
ENSMUST00000169020.8
3UTR TCA 90 bp TCCTCCCTCCTATGCTCCGGCCCTGTCATCTTCACACTGGAGGAGTaGGGGAAGATGGCTGGGGATCCTGCTCCTGTAAAGCTCAGACTA +
Preference number: 1 (lower is better)
Translates to: SSLLCSGPVIFTLEE*GKMAGDPAPVKLRL
Trigger: TAGTCTGAGCTTTACAGGAGCAGGATCCCCAGCCATCTTCCCTCACTCCTCCAGTGTGAAGATGACAGGGCCGGAGCATAGGAGGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR GCA 90 bp TCCAAACGGATGTCCTCTGTCATCTCCAGCTCTTCCACACGAAGCTaGTTGCGGCACTTGAGTGATACTCGGTGCTCCTTGGCCTCCTGC +
Preference number: 1 (lower is better)
Translates to: SKRMSSVISSSSTRS*LRHLSDTRCSLASC
Trigger: GCAGGAGGCCAAGGAGCACCGAGTATCACTCAAGTGCCGCAAGCAGCTTCGTGTGGAAGAGCTGGAGATGACAGAGGACATCCGTTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR CCA 90 bp GAGCTTGTTGGTCAGGAAGTCTGCCTGTCAGTCAGGAAGTCTGCCTaGCATGCACAGAAAGTCAGGCTTCAATGCCAGCCACGCACCCGA +
Preference number: 1 (lower is better)
Translates to: ELVGQEVCLSVRKSA*HAQKVRLQCQPRTR
Trigger: TCGGGTGCGTGGCTGGCATTGAAGCCTGACTTTCTGTGCATGCCAGGCAGACTTCCTGACTGACAGGCAGACTTCCTGACCAACAAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR TCA 90 bp GCCTGCGCCTCTACCTGTCCTTCAGCTCTCGTGTCACTCTCTTGGTaGTCCGTCCACACATCAGGCCAATCAGGAAGAGTATGCAGATGC +
Preference number: 1 (lower is better)
Translates to: ACASTCPSALVSLSW*SVHTSGQSGRVCRC
Trigger: GCATCTGCATACTCTTCCTGATTGGCCTGATGTGTGGACGGATCACCAAGAGAGTGACACGAGAGCTGAAGGACAGGTAGAGGCGCAGGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR TCA 90 bp CTCCCTAGTCCGCTTCCACTGACACAGAGAGGCTCACATCTGCACTaGAGTGGGCGACACAGAAATGCCTGTTGCTATGAGACTGTGGGT +
Preference number: 1 (lower is better)
Translates to: LPSPLPLTQRGSHLH*SGRHRNACCYETVG
Trigger: ACCCACAGTCTCATAGCAACAGGCATTTCTGTGTCGCCCACTTCAGTGCAGATGTGAGCCTCTCTGTGTCAGTGGAAGCGGACTAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR GCA 90 bp CTCCACATCTCAATCCGGTCATTGAGGCGCTTTTTGCACTCTGGCTaGAATCTCACTCGCTTATCTTCCAGGGCCTCCATCAGGCAGGAC +
Preference number: 1 (lower is better)
Translates to: LHISIRSLRRFLHSG*NLTRLSSRASIRQD
Trigger: GTCCTGCCTGATGGAGGCCCTGGAAGATAAGCGAGTGAGATTGCAGCCAGAGTGCAAAAAGCGCCTCAATGACCGGATTGAGATGTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR GCA 90 bp AAAGGAGCTTGTTGGTCAGGAAGTCTGCCTGTCAGTCAGGAAGTCTaGCTGGCATGCACAGAAAGTCAGGCTTCAATGCCAGCCACGCAC +
Preference number: 1 (lower is better)
Translates to: KGACWSGSLPVSQEV*LACTESQASMPATH
Trigger: GTGCGTGGCTGGCATTGAAGCCTGACTTTCTGTGCATGCCAGGCAGACTTCCTGACTGACAGGCAGACTTCCTGACCAACAAGCTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR TCA 90 bp TGCTGCAGGCAGTGTGGATTCCTGTCAGTGCAGAAGCAGCAGTGCTaGGACACACATCATATGCTAAGCACATACCGGAAGGGAGCCACA +
Preference number: 1 (lower is better)
Translates to: CCRQCGFLSVQKQQC*DTHHMLSTYRKGAT
Trigger: TGTGGCTCCCTTCCGGTATGTGCTTAGCATATGATGTGTGTCTCAGCACTGCTGCTTCTGCACTGACAGGAATCCACACTGCCTGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR TCA 90 bp GGAGTGCCCTTGCCTATTAAGGATGCATGGCTCAGCAAGCTGGCTTaGTCCACAGAACCAGGACTGGAAATGGTGGCCAGAAGTTCTCTG +
Preference number: 1 (lower is better)
Translates to: GVPLPIKDAWLSKLA*STEPGLEMVARSSL
Trigger: CAGAGAACTTCTGGCCACCATTTCCAGTCCTGGTTCTGTGGATCAAGCCAGCTTGCTGAGCCATGCATCCTTAATAGGCAAGGGCACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR TCA 90 bp GATGTGGGCCAAAGTTGCTTCTGGGAGAGGAAACAGACATGTCAATaGTCAGGCACGGGATATGCATCGCTCCTCCAAGTCCTGCTGACA +
Preference number: 1 (lower is better)
Translates to: DVGQSCFWERKQTCQ*SGTGYASLLQVLLT
Trigger: TGTCAGCAGGACTTGGAGGAGCGATGCATATCCCGTGCCTGATCATTGACATGTCTGTTTCCTCTCCCAGAAGCAACTTTGGCCCACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR TCA 90 bp AAAAGAAGTTTAGTTTGTCTGGTTCTTGGCTCATTGACAGATTTCTaGCCTGGTCCACAGATGCCCTGTCCCTGGCCCAGGCCCCGGCTT +
Preference number: 1 (lower is better)
Translates to: KRSLVCLVLGSLTDF*PGPQMPCPWPRPRL
Trigger: AAGCCGGGGCCTGGGCCAGGGACAGGGCATCTGTGGACCAGGTCAGAAATCTGTCAATGAGCCAAGAACCAGACAAACTAAACTTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR GCA 90 bp GCCAGGGGTGATGGCTGCACAGTGGTGTTTAATGTCCAAGGCACATaGTGTGTGAAGAACGGGGTCCACAAAGATGTCTGCTTTGCTTTC +
Preference number: 1 (lower is better)
Translates to: ARGDGCTVVFNVQGT*CVKNGVHKDVCFAF
Trigger: GAAAGCAAAGCAGACATCTTTGTGGACCCCGTTCTTCACACAGCATGTGCCTTGGACATTAAACACCACTGTGCAGCCATCACCCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR CCA 90 bp ACGCCAATGGCACACTTCTCGTTCATGTCCTTCTGGTGCTTGTTCTaGATCAGACACTCCATCAGGTCCCCAGAGTCGATCTGGTTGTCT +
Preference number: 1 (lower is better)
Translates to: TPMAHFSFMSFWCLF*IRHSIRSPESIWLS
Trigger: AGACAACCAGATCGACTCTGGGGACCTGATGGAGTGTCTGATCCAGAACAAGCACCAGAAGGACATGAACGAGAAGTGTGCCATTGGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR TCA 90 bp CTGGAGCCACCTTGGCTGCATAACTCCACATCTCAATCCGGTCATTaGGGCGCTTTTTGCACTCTGGCTGCAATCTCACTCGCTTATCTT +
Preference number: 1 (lower is better)
Translates to: LEPPWLHNSTSQSGH*GAFCTLAAISLAYL
Trigger: AAGATAAGCGAGTGAGATTGCAGCCAGAGTGCAAAAAGCGCCTCAATGACCGGATTGAGATGTGGAGTTATGCAGCCAAGGTGGCTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR GCA 90 bp ATCTTGAGCAGGTTGACCTTCAGGCACTCTTCCACTTGGCCTGTTTaGTCCTGGGCTGCTGCTTCTTCAGCACATAGATTGGCAATCTCA +
Preference number: 1 (lower is better)
Translates to: ILSRLTFRHSSTWPV*SWAAASSAHRLAIS
Trigger: TGAGATTGCCAATCTATGTGCTGAAGAAGCAGCAGCCCAGGAGCAAACAGGCCAAGTGGAAGAGTGCCTGAAGGTCAACCTGCTCAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR GCA 90 bp CTTCTGGGAGAGGAAACAGACATGTCAATGATCAGGCACGGGATATaGATCGCTCCTCCAAGTCCTGCTGACACCTGCTGCATTTACATG +
Preference number: 1 (lower is better)
Translates to: LLGEETDMSMIRHGI*IAPPSPADTCCIYM
Trigger: CATGTAAATGCAGCAGGTGTCAGCAGGACTTGGAGGAGCGATGCATATCCCGTGCCTGATCATTGACATGTCTGTTTCCTCTCCCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR GCA 90 bp ATCCCTTCATTTAGAGGCACAAAGGAGCTTGTTGGTCAGGAAGTCTaGCTGTCAGTCAGGAAGTCTGCCTGGCATGCACAGAAAGTCAGG +
Preference number: 1 (lower is better)
Translates to: IPSFRGTKELVGQEV*LSVRKSAWHAQKVR
Trigger: CCTGACTTTCTGTGCATGCCAGGCAGACTTCCTGACTGACAGGCAGACTTCCTGACCAACAAGCTCCTTTGTGCCTCTAAATGAAGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR GCA 90 bp CCACAGAACCAGGACTGGAAATGGTGGCCAGAAGTTCTCTGGGAATaGAGAGAGTTAAGGCTTTCCCAGGGTCAGACTGCTAAAATACCC +
Preference number: 1 (lower is better)
Translates to: PQNQDWKWWPEVLWE*RELRLSQGQTAKIP
Trigger: GGGTATTTTAGCAGTCTGACCCTGGGAAAGCCTTAACTCTCTGCATTCCCAGAGAACTTCTGGCCACCATTTCCAGTCCTGGTTCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR CCA 90 bp ATAACTCCACATCTCAATCCGGTCATTGAGGCGCTTTTTGCACTCTaGCTGCAATCTCACTCGCTTATCTTCCAGGGCCTCCATCAGGCA +
Preference number: 1 (lower is better)
Translates to: ITPHLNPVIEALFAL*LQSHSLIFQGLHQA
Trigger: TGCCTGATGGAGGCCCTGGAAGATAAGCGAGTGAGATTGCAGCCAGAGTGCAAAAAGCGCCTCAATGACCGGATTGAGATGTGGAGTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR CCA 90 bp GGCTGCTTAGTGTCCCCACTACTTGCTGAAGTCCCTGCCTTGATGTaGGCCAAAGTTGCTTCTGGGAGAGGAAACAGACATGTCAATGAT +
Preference number: 1 (lower is better)
Translates to: GCLVSPLLAEVPALM*AKVASGRGNRHVND
Trigger: ATCATTGACATGTCTGTTTCCTCTCCCAGAAGCAACTTTGGCCCACATCAAGGCAGGGACTTCAGCAAGTAGTGGGGACACTAAGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR CCA 90 bp TCACAGACAGGATGTAGTTCTTTGAGGGAGATGTCATCACTTGCATaGCAAGATCAGAGAAGCCATCTGCTGGAGCCACCTTGGCTGCAT +
Preference number: 1 (lower is better)
Translates to: SQTGCSSLREMSSLA*QDQRSHLLEPPWLH
Trigger: ATGCAGCCAAGGTGGCTCCAGCAGATGGCTTCTCTGATCTTGCCATGCAAGTGATGACATCTCCCTCAAAGAACTACATCCTGTCTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR CCA 90 bp CTTGATCCACAGAACCAGGACTGGAAATGGTGGCCAGAAGTTCTCTaGGAATGCAGAGAGTTAAGGCTTTCCCAGGGTCAGACTGCTAAA +
Preference number: 1 (lower is better)
Translates to: LDPQNQDWKWWPEVL*ECRELRLSQGQTAK
Trigger: TTTAGCAGTCTGACCCTGGGAAAGCCTTAACTCTCTGCATTCCCAGAGAACTTCTGGCCACCATTTCCAGTCCTGGTTCTGTGGATCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR TCA 90 bp GTGATGGCTGCACAGTGGTGTTTAATGTCCAAGGCACATGCTGTGTaGAGAACGGGGTCCACAAAGATGTCTGCTTTGCTTTCCTTCAAC +
Preference number: 1 (lower is better)
Translates to: VMAAQWCLMSKAHAV*RTGSTKMSALLSFN
Trigger: GTTGAAGGAAAGCAAAGCAGACATCTTTGTGGACCCCGTTCTTCACACAGCATGTGCCTTGGACATTAAACACCACTGTGCAGCCATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR TCA 90 bp GAGTATGCAGATGCTCCCGCTGATCACAGACAGGATGTAGTTCTTTaGGGGAGATGTCATCACTTGCATGGCAAGATCAGAGAAGCCATC +
Preference number: 1 (lower is better)
Translates to: EYADAPADHRQDVVL*GRCHHLHGKIREAI
Trigger: GATGGCTTCTCTGATCTTGCCATGCAAGTGATGACATCTCCCTCAAAGAACTACATCCTGTCTGTGATCAGCGGGAGCATCTGCATACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR TCA 90 bp AGGCCGAGGATACTAATCACACAACTCCACCCTCGTCCTAGTGTCTaGGAAGCAGAGCATCTTCCATCAGCTGATTTCAACAGGAAGACA +
Preference number: 1 (lower is better)
Translates to: RPRILITQLHPRPSV*EAEHLPSADFNRKT
Trigger: TGTCTTCCTGTTGAAATCAGCTGATGGAAGATGCTCTGCTTCTCAGACACTAGGACGAGGGTGGAGTTGTGTGATTAGTATCCTCGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR GCA 90 bp GACTATGGAAGGTTGTCAGATCACCAAAATGTAACACTGAGCCAGTaGCTACTGGAGTGGGTACACGCAGCAAATGAACAGAAAGGAGGG +
Preference number: 1 (lower is better)
Translates to: DYGRLSDHQNVTLSQ*LLEWVHAANEQKGG
Trigger: CCCTCCTTTCTGTTCATTTGCTGCGTGTACCCACTCCAGTAGGCACTGGCTCAGTGTTACATTTTGGTGATCTGACAACCTTCCATAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR CCA 90 bp AGAACAGTAGTTCTTGATGTCACTCTTGCAGGCTTCATACAGATCTaGTTCCAAACGGATGTCCTCTGTCATCTCCAGCTCTTCCACACG +
Preference number: 1 (lower is better)
Translates to: RTVVLDVTLAGFIQI*FQTDVLCHLQLFHT
Trigger: CGTGTGGAAGAGCTGGAGATGACAGAGGACATCCGTTTGGAACCAGATCTGTATGAAGCCTGCAAGAGTGACATCAAGAACTACTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR CCA 90 bp CTAGAAGCAGCCCCATCAGAAAAGAAGTTTAGTTTGTCTGGTTCTTaGCTCATTGACAGATTTCTGACCTGGTCCACAGATGCCCTGTCC +
Preference number: 1 (lower is better)
Translates to: LEAAPSEKKFSLSGS*LIDRFLTWSTDALS
Trigger: GGACAGGGCATCTGTGGACCAGGTCAGAAATCTGTCAATGAGCCAAGAACCAGACAAACTAAACTTCTTTTCTGATGGGGCTGCTTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR TCA 90 bp GTCAATGATCAGGCACGGGATATGCATCGCTCCTCCAAGTCCTGCTaGCACCTGCTGCATTTACATGAAAGAATAATCCTACTGTTTGAG +
Preference number: 1 (lower is better)
Translates to: VNDQARDMHRSSKSC*HLLHLHERIILLFE
Trigger: CTCAAACAGTAGGATTATTCTTTCATGTAAATGCAGCAGGTGTCAGCAGGACTTGGAGGAGCGATGCATATCCCGTGCCTGATCATTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR TCA 90 bp AGGTTGGGGTTCTTGGCAAGTTCATGTCTATCTAATTTATACCCATaGCTGACTTATGAGGGCACAGAGCCCACCCTACTAAGCCCAATG +
Preference number: 1 (lower is better)
Translates to: RLGFLASSCLSNLYP*LTYEGTEPTLLSPM
Trigger: CATTGGGCTTAGTAGGGTGGGCTCTGTGCCCTCATAAGTCAGTCATGGGTATAAATTAGATAGACATGAACTTGCCAAGAACCCCAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR GCA 90 bp AGGCACATGCTGTGTGAAGAACGGGGTCCACAAAGATGTCTGCTTTaGTTTCCTTCAACATGTTTAACACTTCCTTTTTACACAGCTCTG +
Preference number: 1 (lower is better)
Translates to: RHMLCEERGPQRCLL*FPSTCLTLPFYTAL
Trigger: CAGAGCTGTGTAAAAAGGAAGTGTTAAACATGTTGAAGGAAAGCAAAGCAGACATCTTTGTGGACCCCGTTCTTCACACAGCATGTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR GCA 90 bp AGGTTAATAAAATATATATTATATAAATATATCTCCTACTGTACATaGCACCCTCTGTACAGCCACTGTGACACCATGGCCCAAACTCGC +
Preference number: 1 (lower is better)
Translates to: RLIKYILYKYISYCT*HPLYSHCDTMAQTR
Trigger: GCGAGTTTGGGCCATGGTGTCACAGTGGCTGTACAGAGGGTGGCATGTACAGTAGGAGATATATTTATATAATATATATTTTATTAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR CAA 90 bp ACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTaGGTGGTCAGGCCTGCGCCTCTACCTGTCCTTCAGCTCTCGTGT +
Preference number: 2 (lower is better)
Translates to: TLYRTAVQAGPGGGS*VVRPAPLPVLQLSC
Trigger: ACACGAGAGCTGAAGGACAGGTAGAGGCGCAGGCCTGACCACCAAGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR-3UTR TCA 90 bp GCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGGGAGGAGGAGGTGTCACTCTCTTGGTaGTCCGTCCACACATCAGGC +
Preference number: 2 (lower is better)
Translates to: ATTKAASCRRCKGSWEEEVSLSW*SVHTSG
Trigger: GCCTGATGTGTGGACGGATCACCAAGAGAGTGACAC...CTCCTCCTCCCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR-3UTR CCA 90 bp GCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGGGAGGAGGAGAGCTCTATCCCATCTTaGAGGAAGAGGATGGCTGGG +
Preference number: 2 (lower is better)
Translates to: ATTKAASCRRCKGSWEEESSIPS*RKRMAG
Trigger: CCCAGCCATCCTCTTCCTCCAAGATGGGATAGAGCT...CTCCTCCTCCCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR CAA 90 bp TCCACACGAAGCTGCTTGCGGCACTTGAGTGATACTCGGTGCTCCTaGGCCTCCTGCAGAGTGTCGTTGCGCACAGTGGTGCTCAGGCAG +
Preference number: 2 (lower is better)
Translates to: STRSCLRHLSDTRCS*ASCRVSLRTVVLRQ
Trigger: CTGCCTGAGCACCACTGTGCGCAACGACACTCTGCAGGAGGCCAAGGAGCACCGAGTATCACTCAAGTGCCGCAAGCAGCTTCGTGTGGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR-3UTR TCA 90 bp CTTGGTGGTCAGGCCTGCGCCTCTACCTGTCCTTCAGCTCTCGTGTCACTCTCTCGGACTCTAACTCGGTaGGGTTGCCCACGATGTCTC +
Preference number: 2 (lower is better)
Translates to: LGGQACASTCPSALVSLSRTLTR*GCPRCL
Trigger: GAGACATCGTGGGCAACCTCACCGAGTTAGAGTCCG...AGAGAGTGACACGAGAGCTGAAGGACAGGTAGAGGCGCAGGCCTGACCACCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR-3UTR CCA 90 bp TGGCTCCTTGGTGGTCAGGCCTGCGCCTCTACCTGTCCTTCAGCTCTCGTGTCAATACTCGGTGCTCCTTaGCCTCCTGCAGAGTGTCGT +
Preference number: 2 (lower is better)
Translates to: WLLGGQACASTCPSALVSILGAP*PPAECR
Trigger: ACGACACTCTGCAGGAGGCCAAGGAGCACCGAGTAT...TGACACGAGAGCTGAAGGACAGGTAGAGGCGCAGGCCTGACCACCAAGGAGCCA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR-3UTR CCA 90 bp GCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGGGAGGAGGAGGGCCAAAGTTGCTTCTaGGAGAGGAAACAGACATGT +
Preference number: 2 (lower is better)
Translates to: ATTKAASCRRCKGSWEEEGQSCF*ERKQTC
Trigger: ACATGTCTGTTTCCTCTCCCAGAAGCAACTTTGGCC...CTCCTCCTCCCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR-3UTR TCA 90 bp GCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGGGAGGAGGAGTTGGTCAGGATGCCATaGCAGAACTTAGGAATGTCA +
Preference number: 2 (lower is better)
Translates to: ATTKAASCRRCKGSWEEELVRMP*QNLGMS
Trigger: TGACATTCCTAAGTTCTGTCATGGCATCCTGACCAA...CTCCTCCTCCCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR-3UTR TCA 90 bp ATCCGGTCATTGAGGCGCTTTTTGCACTCTGGCTGCAATCTCACTCGCTTATCTGCCCGCGGCCAGGGGTaGTGGCTGCACAGTGGTGTT +
Preference number: 2 (lower is better)
Translates to: IRSLRRFLHSGCNLTRLSARGQG*WLHSGV
Trigger: AACACCACTGTGCAGCCATCACCCCTGGCCGCGGGC...AGATAAGCGAGTGAGATTGCAGCCAGAGTGCAAAAAGCGCCTCAATGACCGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR-3UTR TCA 90 bp CGCCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGTGATTTGGAGCAACTaGCAGAGCCTGCACAGAACG +
Preference number: 2 (lower is better)
Translates to: RQQKLPPKQPAADAARAAVIWSN*QSLHRT
Trigger: CGTTCTGTGCAGGCTCTGTCAGTTGCTCCAAATCAC...AGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR-3UTR GCA 90 bp CTTGGTGGTCAGGCCTGCGCCTCTACCTGTCCTTCAGCTCTCGTGTCACTCTCTCGTTGCGCACAGTGGTaGTCAGGCAGATCACTACGT +
Preference number: 2 (lower is better)
Translates to: LGGQACASTCPSALVSLSRCAQW*SGRSLR
Trigger: ACGTAGTGATCTGCCTGAGCACCACTGTGCGCAACG...AGAGAGTGACACGAGAGCTGAAGGACAGGTAGAGGCGCAGGCCTGACCACCAAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR CAA 90 bp TCCTCTGTCATCTCCAGCTCTTCCACACGAAGCTGCTTGCGGCACTaGAGTGATACTCGGTGCTCCTTGGCCTCCTGCAGAGTGTCGTTG +
Preference number: 2 (lower is better)
Translates to: SSVISSSSTRSCLRH*SDTRCSLASCRVSL
Trigger: CAACGACACTCTGCAGGAGGCCAAGGAGCACCGAGTATCACTCAAGTGCCGCAAGCAGCTTCGTGTGGAAGAGCTGGAGATGACAGAGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR-3UTR TCA 90 bp CGCCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTTCTCAATCCGGTCATTaGGGCGCTTTTTGCACTCTG +
Preference number: 2 (lower is better)
Translates to: RQQKLPPKQPAADAARAASQSGH*GAFCTL
Trigger: CAGAGTGCAAAAAGCGCCTCAATGACCGGATTGAGA...AGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR-3UTR CCA 90 bp TTAGGCAATGAAAGCAGGACAGTGAAGGGTGAGGCTCAGACTTTGGCTCGCACTGAGGAAGAGGATGGCTaGGCCCCTGCTGGCTGTGCA +
Preference number: 2 (lower is better)
Translates to: LGNESRTVKGEAQTLARTEEEDG*APAGCA
Trigger: TGCACAGCCAGCAGGGGCCCAGCCATCCTCTTCCTC...AGTGCGAGCCAAAGTCTGAGCCTCACCCTTCACTGTCCTGCTTTCATTGCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR CAA 90 bp CACTTGAGTGATACTCGGTGCTCCTTGGCCTCCTGCAGAGTGTCGTaGCGCACAGTGGTGCTCAGGCAGATCACTACGTCCACCTTCTTT +
Preference number: 2 (lower is better)
Translates to: HLSDTRCSLASCRVS*RTVVLRQITTSTFF
Trigger: AAAGAAGGTGGACGTAGTGATCTGCCTGAGCACCACTGTGCGCAACGACACTCTGCAGGAGGCCAAGGAGCACCGAGTATCACTCAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR CAA 90 bp AAACGGATGTCCTCTGTCATCTCCAGCTCTTCCACACGAAGCTGCTaGCGGCACTTGAGTGATACTCGGTGCTCCTTGGCCTCCTGCAGA +
Preference number: 2 (lower is better)
Translates to: KRMSSVISSSSTRSC*RHLSDTRCSLASCR
Trigger: TCTGCAGGAGGCCAAGGAGCACCGAGTATCACTCAAGTGCCGCAAGCAGCTTCGTGTGGAAGAGCTGGAGATGACAGAGGACATCCGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR CAA 90 bp TCAGGCCTGCGCCTCTACCTGTCCTTCAGCTCTCGTGTCACTCTCTaGGTGATCCGTCCACACATCAGGCCAATCAGGAAGAGTATGCAG +
Preference number: 2 (lower is better)
Translates to: SGLRLYLSFSSRVTL*VIRPHIRPIRKSMQ
Trigger: CTGCATACTCTTCCTGATTGGCCTGATGTGTGGACGGATCACCAAGAGAGTGACACGAGAGCTGAAGGACAGGTAGAGGCGCAGGCCTGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR-3UTR GCA 90 bp GGGGGTTCTGGAAGTCACACTGATGCACAAGAGTGGATGCTCTCTAGGAAGGCCAAAGTCAGGCTTCAATaGCAGCCACGCACCCGAGAT +
Preference number: 2 (lower is better)
Translates to: GGSGSHTDAQEWMLSRKAKVRLQ*QPRTRD
Trigger: ATCTCGGGTGCGTGGCTGGCATTGAAGCCTGACTTT...GGCCTTCCTAGAGAGCATCCACTCTTGTGCATCAGTGTGACTTCCAGAACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR-3UTR CCA 90 bp CGCCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTAGGCATGAGATAACTTaGCCTTCTAGCTCTGAATCG +
Preference number: 2 (lower is better)
Translates to: RQQKLPPKQPAADAARAARHEIT*PSSSES
Trigger: CGATTCAGAGCTAGAAGGCCAAGTTATCTCATGCCT...AGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR CAA 90 bp AGAGCAGGCTGCTTAGTGTCCCCACTACTTGCTGAAGTCCCTGCCTaGATGTGGGCCAAAGTTGCTTCTGGGAGAGGAAACAGACATGTC +
Preference number: 2 (lower is better)
Translates to: RAGCLVSPLLAEVPA*MWAKVASGRGNRHV
Trigger: GACATGTCTGTTTCCTCTCCCAGAAGCAACTTTGGCCCACATCAAGGCAGGGACTTCAGCAAGTAGTGGGGACACTAAGCAGCCTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR-3UTR CCA 90 bp TGGTCAGGCCTGCGCCTCTACCTGTCCTTCAGCTCTCGTGTCACTCTCTTGGTGTTAAATACTTTCTGGTaGCAACGGGTACTCAGCTGC +
Preference number: 2 (lower is better)
Translates to: WSGLRLYLSFSSRVTLLVLNTFW*QRVLSC
Trigger: GCAGCTGAGTACCCGTTGCCACCAGAAAGTATTTAA...CACCAAGAGAGTGACACGAGAGCTGAAGGACAGGTAGAGGCGCAGGCCTGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR-3UTR CCA 90 bp AAAGAAATGTCTTGCTCCTGGAGTCCCTTCACTAGAAGCAGCCCCATCAGAAAACTTGGAGGAAGAGGATaGCTGGGCCCCTGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: KEMSCSWSPFTRSSPIRKLGGRG*LGPCWL
Trigger: CAGCCAGCAGGGGCCCAGCCATCCTCTTCCTCCAAG...TTTTCTGATGGGGCTGCTTCTAGTGAAGGGACTCCAGGAGCAAGACATTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR-3UTR CCA 90 bp AATCTGCTGCAGGCAGTGTGGATTCCTGTCAGTGCAGAAGCAGCAGTGCTGAGAGTCAGGAAGTCTGCCTaGCATGCACAGAAAGTCAGG +
Preference number: 2 (lower is better)
Translates to: NLLQAVWIPVSAEAAVLRVRKSA*HAQKVR
Trigger: CCTGACTTTCTGTGCATGCCAGGCAGACTTCCTGAC...TCTCAGCACTGCTGCTTCTGCACTGACAGGAATCCACACTGCCTGCAGCAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR-3UTR TCA 90 bp ATCCGGTCATTGAGGCGCTTTTTGCACTCTGGCTGCAATCTCACTCGCTTATCTTCATCGAGATGGTCCTaGAGGCACTCAAGCTCCTGC +
Preference number: 2 (lower is better)
Translates to: IRSLRRFLHSGCNLTRLSSSRWS*RHSSSC
Trigger: GCAGGAGCTTGAGTGCCTTCAGGACCATCTCGATGA...AGATAAGCGAGTGAGATTGCAGCCAGAGTGCAAAAAGCGCCTCAATGACCGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR-3UTR TCA 90 bp ACAGTCAAGTCCAGGGACCGGGTTAAAAGAAATGTCTTGCTCCTGGAGTCCCTTGTCCCCACTACTTGCTaGAGTCCCTGCCTTGATGTG +
Preference number: 2 (lower is better)
Translates to: TVKSRDRVKRNVLLLESLVPTTC*SPCLDV
Trigger: CACATCAAGGCAGGGACTTCAGCAAGTAGTGGGGAC...AAGGGACTCCAGGAGCAAGACATTTCTTTTAACCCGGTCCCTGGACTTGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR-3UTR GCA 90 bp TTAGGCAATGAAAGCAGGACAGTGAAGGGTGAGGCTCAGACTTTGGCTCGCACTGATGGCTGGGGATCCTaGTCCTGTAAAGCTCAGACT +
Preference number: 2 (lower is better)
Translates to: LGNESRTVKGEAQTLARTDGWGS*SCKAQT
Trigger: AGTCTGAGCTTTACAGGAGCAGGATCCCCAGCCATC...AGTGCGAGCCAAAGTCTGAGCCTCACCCTTCACTGTCCTGCTTTCATTGCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR-3UTR GCA 90 bp ACAGTCAAGTCCAGGGACCGGGTTAAAAGAAATGTCTTGCTCCTGGAGTCCCTTAGCCCTGGAACTCACTaGCACCAGAAAAGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: TVKSRDRVKRNVLLLESLSPGTH*HQKRQQ
Trigger: CTGCTGCCTTTTCTGGTGGCAGTGAGTTCCAGGGCT...AAGGGACTCCAGGAGCAAGACATTTCTTTTAACCCGGTCCCTGGACTTGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR-3UTR TCA 90 bp TGTCACTCTTGCAGGCTTCATACAGATCTGGTTCCAAACGGATGTCCTCTGTCATGTACCAGCTGGAAGTaGGTGACGCCAATGGCACAC +
Preference number: 2 (lower is better)
Translates to: CHSCRLHTDLVPNGCPLSCTSWK*VTPMAH
Trigger: GTGTGCCATTGGCGTCACTCACTTCCAGCTGGTACA...TGACAGAGGACATCCGTTTGGAACCAGATCTGTATGAAGCCTGCAAGAGTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR-3UTR TCA 90 bp GGCACATGCTGTGTGAAGAACGGGGTCCACAAAGATGTCTGCTTTGCTTTCCTTATTGGCAATCTCATCTaGGCAGTGCAGCTGGAGCTG +
Preference number: 2 (lower is better)
Translates to: GTCCVKNGVHKDVCFAFLIGNLI*AVQLEL
Trigger: CAGCTCCAGCTGCACTGCTCAGATGAGATTGCCAAT...AAGGAAAGCAAAGCAGACATCTTTGTGGACCCCGTTCTTCACACAGCATGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR-3UTR GCA 90 bp TGGGTGATCTGGCGCTTGGTTATCATCTGTTTGCATTTGGGATCCATCAATTCACCTGCAGAGTGTCGTTaGGCACAGTGGTGCTCAGGC +
Preference number: 2 (lower is better)
Translates to: WVIWRLVIICLHLGSINSPAECR*AQWCSG
Trigger: GCCTGAGCACCACTGTGCGCAACGACACTCTGCAGG...TGAATTGATGGATCCCAAATGCAAACAGATGATAACCAAGCGCCAGATCACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR-3UTR GCA 90 bp AAGTTTAGTTTGTCTGGTTCTTGGCTCATTGACAGATTTCTGACCTGGTCCACATCGCCAAAGGGGAACTaGAGTGCCTGGGCTCCTCCC +
Preference number: 2 (lower is better)
Translates to: KFSLSGSWLIDRFLTWSTSPKGN*SAWAPP
Trigger: GGGAGGAGCCCAGGCACTGCAGTTCCCCTTTGGCGA...TGTGGACCAGGTCAGAAATCTGTCAATGAGCCAAGAACCAGACAAACTAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR-3UTR CCA 90 bp TCACTTGCATGGCAAGATCAGAGAAGCCATCTGCTGGAGCCACCTTGGCTGCATGTGTTCTGGGTGATCTaGCGCTTGGTTATCATCTGT +
Preference number: 2 (lower is better)
Translates to: SLAWQDQRSHLLEPPWLHVFWVI*RLVIIC
Trigger: ACAGATGATAACCAAGCGCCAGATCACCCAGAACAC...ATGCAGCCAAGGTGGCTCCAGCAGATGGCTTCTCTGATCTTGCCATGCAAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR-3UTR CCA 90 bp AACCAGGACTGGAAATGGTGGCCAGAAGTTCTCTGGGAATGCAGAGAGTTAAGGGATGGGAAGATGCAGTaGGCACCTGATGCTGCTCTA +
Preference number: 2 (lower is better)
Translates to: NQDWKWWPEVLWECRELRDGKMQ*APDAAL
Trigger: TAGAGCAGCATCAGGTGCCCACTGCATCTTCCCATC...CCTTAACTCTCTGCATTCCCAGAGAACTTCTGGCCACCATTTCCAGTCCTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR CAA 90 bp CAATCACTTTCCACATCCCTTCATTTAGAGGCACAAAGGAGCTTGTaGGTCAGGAAGTCTGCCTGTCAGTCAGGAAGTCTGCCTGGCATG +
Preference number: 2 (lower is better)
Translates to: QSLSTSLHLEAQRSL*VRKSACQSGSLPGM
Trigger: CATGCCAGGCAGACTTCCTGACTGACAGGCAGACTTCCTGACCAACAAGCTCCTTTGTGCCTCTAAATGAAGGGATGTGGAAAGTGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR-3UTR TCA 90 bp TCCCTTCATTTAGAGGCACAAAGGAGCTTGTTGGTCAGGAAGTCTGCCTGTCAGGAGGGTTCATCAAGATaGGGCAGCTCTATCCCATCT +
Preference number: 2 (lower is better)
Translates to: SLHLEAQRSLLVRKSACQEGSSR*GSSIPS
Trigger: AGATGGGATAGAGCTGCCTCATCTTGATGAACCCTC...CTGACAGGCAGACTTCCTGACCAACAAGCTCCTTTGTGCCTCTAAATGAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR-3UTR TCA 90 bp ACCGGGTTAAAAGAAATGTCTTGCTCCTGGAGTCCCTTCACTAGAAGCAGCCCCTGGTTCTTGGCTCATTaGCAGATTTCTGACCTGGTC +
Preference number: 2 (lower is better)
Translates to: TGLKEMSCSWSPFTRSSPWFLAH*QISDLV
Trigger: GACCAGGTCAGAAATCTGTCAATGAGCCAAGAACCA...GGGGCTGCTTCTAGTGAAGGGACTCCAGGAGCAAGACATTTCTTTTAACCCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR-3UTR GCA 90 bp TCACTTGCATGGCAAGATCAGAGAAGCCATCTGCTGGAGCCACCTTGGCTGCATTTCATGTCCTTCTGGTaGTTGTTCTGGATCAGACAC +
Preference number: 2 (lower is better)
Translates to: SLAWQDQRSHLLEPPWLHFMSFW*LFWIRH
Trigger: GTGTCTGATCCAGAACAAGCACCAGAAGGACATGAA...ATGCAGCCAAGGTGGCTCCAGCAGATGGCTTCTCTGATCTTGCCATGCAAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR-3UTR GCA 90 bp TGTCACTCTTGCAGGCTTCATACAGATCTGGTTCCAAACGGATGTCCTCTGTCATTGAGTGATACTCGGTaGTCCTTGGCCTCCTGCAGA +
Preference number: 2 (lower is better)
Translates to: CHSCRLHTDLVPNGCPLSLSDTR*SLASCR
Trigger: TCTGCAGGAGGCCAAGGAGCACCGAGTATCACTCAA...TGACAGAGGACATCCGTTTGGAACCAGATCTGTATGAAGCCTGCAAGAGTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR-3UTR GCA 90 bp AATACCAAAGGGAAATGTACCTACCACCAGTGGTCCCCAAGACACTGGCATGAGGATGTGGGCCAAAGTTaGTTCTGGGAGAGGAAACAG +
Preference number: 2 (lower is better)
Translates to: NTKGKCTYHQWSPRHWHEDVGQS*FWERKQ
Trigger: CTGTTTCCTCTCCCAGAAGCAACTTTGGCCCACATC...CTCATGCCAGTGTCTTGGGGACCACTGGTGGTAGGTACATTTCCCTTTGGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR-3UTR GCA 90 bp ACTGCCCGGCCAGGTTGGGGTTCTTGGCAAGTTCATGTCTATCTAATTTATACCATCTCCTACTGTACATaGCACCCTCTGTACAGCCAC +
Preference number: 2 (lower is better)
Translates to: TARPGWGSWQVHVYLIYTISYCT*HPLYSH
Trigger: GTGGCTGTACAGAGGGTGGCATGTACAGTAGGAGAT...GGTATAAATTAGATAGACATGAACTTGCCAAGAACCCCAACCTGGCCGGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR CAA 90 bp AGCAAAGCTTCTATTTGTATATCCTCGGACTCTAACTCGGTGAGGTaGCCCACGATGTCTCTGCATTCCACAGCTAAGTCATCGAGATGG +
Preference number: 2 (lower is better)
Translates to: SKASICISSDSNSVR*PTMSLHSTAKSSRW
Trigger: CCATCTCGATGACTTAGCTGTGGAATGCAGAGACATCGTGGGCAACCTCACCGAGTTAGAGTCCGAGGATATACAAATAGAAGCTTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR CAA 90 bp TTTAACACTTCCTTTTTACACAGCTCTGTCTTGATCTTGAGCAGGTaGACCTTCAGGCACTCTTCCACTTGGCCTGTTTGCTCCTGGGCT +
Preference number: 2 (lower is better)
Translates to: FNTSFLHSSVLILSR*TFRHSSTWPVCSWA
Trigger: AGCCCAGGAGCAAACAGGCCAAGTGGAAGAGTGCCTGAAGGTCAACCTGCTCAAGATCAAGACAGAGCTGTGTAAAAAGGAAGTGTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR-3UTR GCA 90 bp AAAGAAATGTCTTGCTCCTGGAGTCCCTTCACTAGAAGCAGCCCCATCAGAAAAAACCTCCAAATCTGCTaGAGGCAGTGTGGATTCCTG +
Preference number: 2 (lower is better)
Translates to: KEMSCSWSPFTRSSPIRKNLQIC*RQCGFL
Trigger: CAGGAATCCACACTGCCTGCAGCAGATTTGGAGGTT...TTTTCTGATGGGGCTGCTTCTAGTGAAGGGACTCCAGGAGCAAGACATTTCTTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR CAA 90 bp GGAGTCCCTTCACTAGAAGCAGCCCCATCAGAAAAGAAGTTTAGTTaGTCTGGTTCTTGGCTCATTGACAGATTTCTGACCTGGTCCACA +
Preference number: 2 (lower is better)
Translates to: GVPSLEAAPSEKKFS*SGSWLIDRFLTWST
Trigger: TGTGGACCAGGTCAGAAATCTGTCAATGAGCCAAGAACCAGACAAACTAAACTTCTTTTCTGATGGGGCTGCTTCTAGTGAAGGGACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR-3UTR TCA 90 bp GGCACATGCTGTGTGAAGAACGGGGTCCACAAAGATGTCTGCTTTGCTTTCCTTCCTTGCAGGCCATTTTaGACTTGTAAGAGAATCGAA +
Preference number: 2 (lower is better)
Translates to: GTCCVKNGVHKDVCFAFLPCRPF*TCKRIE
Trigger: TTCGATTCTCTTACAAGTTCAAAATGGCCTGCAAGG...AAGGAAAGCAAAGCAGACATCTTTGTGGACCCCGTTCTTCACACAGCATGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR-3UTR GCA 90 bp GCCAATCAGGAAGAGTATGCAGATGCTCCCGCTGATCACAGACAGGATGTAGTTATCATCTCCGTCTCCTaGAGCTTAAATACTTTCTGG +
Preference number: 2 (lower is better)
Translates to: ANQEEYADAPADHRQDVVIISVS*SLNTFW
Trigger: CCAGAAAGTATTTAAGCTGCAGGAGACGGAGATGAT...AACTACATCCTGTCTGTGATCAGCGGGAGCATCTGCATACTCTTCCTGATTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR-3UTR CCA 90 bp CTAAATCTTCAGAAGCCATCTCTTCTGGCCTGTACTATTGTTCAGCAAACTAAGGTCCCTGCCTTGATGTaGGCCAAAGTTGCTTCTGGG +
Preference number: 2 (lower is better)
Translates to: LNLQKPSLLACTIVQQTKVPALM*AKVASG
Trigger: CCCAGAAGCAACTTTGGCCCACATCAAGGCAGGGAC...CTTAGTTTGCTGAACAATAGTACAGGCCAGAAGAGATGGCTTCTGAAGATTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR CAA 90 bp CAGAGCATCTTCCATCAGCTGATTTCAACAGGAAGACATAAAAAGTaGGATAACTTTCTGCCAACTCGTCTGGGACAGTGGACTGCATGC +
Preference number: 2 (lower is better)
Translates to: QSIFHQLISTGRHKK*DNFLPTRLGQWTAC
Trigger: GCATGCAGTCCACTGTCCCAGACGAGTTGGCAGAAAGTTATCCAACTTTTTATGTCTTCCTGTTGAAATCAGCTGATGGAAGATGCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR-3UTR CCA 90 bp AAAGAAATGTCTTGCTCCTGGAGTCCCTTCACTAGAAGCAGCCCCATCAGAAAAAGAAGCCATCTCTTCTaGCCTGTACTATTGTTCAGC +
Preference number: 2 (lower is better)
Translates to: KEMSCSWSPFTRSSPIRKRSHLF*PVLLFS
Trigger: GCTGAACAATAGTACAGGCCAGAAGAGATGGCTTCT...TTTTCTGATGGGGCTGCTTCTAGTGAAGGGACTCCAGGAGCAAGACATTTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR CAA 90 bp TTCAACATGTTTAACACTTCCTTTTTACACAGCTCTGTCTTGATCTaGAGCAGGTTGACCTTCAGGCACTCTTCCACTTGGCCTGTTTGC +
Preference number: 2 (lower is better)
Translates to: FNMFNTSFLHSSVLI*SRLTFRHSSTWPVC
Trigger: GCAAACAGGCCAAGTGGAAGAGTGCCTGAAGGTCAACCTGCTCAAGATCAAGACAGAGCTGTGTAAAAAGGAAGTGTTAAACATGTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR CAA 90 bp CTTTCCTTCAACATGTTTAACACTTCCTTTTTACACAGCTCTGTCTaGATCTTGAGCAGGTTGACCTTCAGGCACTCTTCCACTTGGCCT +
Preference number: 2 (lower is better)
Translates to: LSFNMFNTSFLHSSV*ILSRLTFRHSSTWP
Trigger: AGGCCAAGTGGAAGAGTGCCTGAAGGTCAACCTGCTCAAGATCAAGACAGAGCTGTGTAAAAAGGAAGTGTTAAACATGTTGAAGGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR-3UTR TCA 90 bp TCCCTTCATTTAGAGGCACAAAGGAGCTTGTTGGTCAGGAAGTCTGCCTGTCAGCCTGCTGCATTTACATaGAAGAATAATCCTACTGTT +
Preference number: 2 (lower is better)
Translates to: SLHLEAQRSLLVRKSACQPAAFT*KNNPTV
Trigger: AACAGTAGGATTATTCTTTCATGTAAATGCAGCAGG...CTGACAGGCAGACTTCCTGACCAACAAGCTCCTTTGTGCCTCTAAATGAAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR-3UTR GCA 90 bp AAGTTTAGTTTGTCTGGTTCTTGGCTCATTGACAGATTTCTGACCTGGTCCACATTTAAAAATTTGAGTTaGAGGTCAGGTGAGTCGGTC +
Preference number: 2 (lower is better)
Translates to: KFSLSGSWLIDRFLTWSTFKNLS*RSGESV
Trigger: GACCGACTCACCTGACCTGCAACTCAAATTTTTAAA...TGTGGACCAGGTCAGAAATCTGTCAATGAGCCAAGAACCAGACAAACTAAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR CAA 90 bp TCTGTGTTCTGGGTGATCTGGCGCTTGGTTATCATCTGTTTGCATTaGGGATCCATCAATTCACTGTTCTTATTTTGTTTTAAACACTGC +
Preference number: 2 (lower is better)
Translates to: SVFWVIWRLVIICLH*GSINSLFLFCFKHC
Trigger: GCAGTGTTTAAAACAAAATAAGAACAGTGAATTGATGGATCCCAAATGCAAACAGATGATAACCAAGCGCCAGATCACCCAGAACACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR CCA 72 bp GGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTTaGTGGTCAGGCCTGCGCCTCTACCTGTCCTTCAGC +
Preference number: 3 (lower is better)
Translates to: GRLYRRARAVAP*WSGLRLYLSFS
Trigger: GCTGAAGGACAGGTAGAGGCGCAGGCCTGACCACCAAGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR CCA 72 bp CGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTTGGTaGTCAGGCCTGCGCCTCTACCTGTCCTTCAGCTCT +
Preference number: 3 (lower is better)
Translates to: RLYRRARAVAPW*SGLRLYLSFSS
Trigger: AGAGCTGAAGGACAGGTAGAGGCGCAGGCCTGACCACCAAGGAGCCACCGCCCGGGCCCGCCTGTACAGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR GCA 72 bp ACACCATGGCCCAAACTCGCCAAAGGGGAACTGCAGTaGCTGGGCTCCTCCCTCCTATGCTCCGGCCCTGTC +
Preference number: 3 (lower is better)
Translates to: TPWPKLAKGELQ*LGSSLLCSGPV
Trigger: GACAGGGCCGGAGCATAGGAGGGAGGAGCCCAGGCACTGCAGTTCCCCTTTGGCGAGTTTGGGCCATGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR GCA 72 bp ACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTaGAAGGGCAGCTGGGAGGAGGAGGAGGAGGAGGAC +
Preference number: 3 (lower is better)
Translates to: TKATTKAASCRR*KGSWEEEEEED
Trigger: GTCCTCCTCCTCCTCCTCCTCCCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000164283.8
ENSMUST00000168741.8
ENSMUST00000169020.8
3UTR GCA 72 bp CCTTCGCCAACAAAAGCTACCACCAAAGCAGCCAGCTaGCGACGCTGCAAGGGCAGCTGGGAGGAGGAGGAG +
Preference number: 3 (lower is better)
Translates to: PSPTKATTKAAS*RRCKGSWEEEE
Trigger: CTCCTCCTCCTCCCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGGCGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000164283.8
ENSMUST00000168741.8
ENSMUST00000169020.8
3UTR GCA 72 bp CCCTGCTGGCTGTGCACCCAGGCCTGCTTCAGACTCTaGTCCCTCCCTAGTCCGCTTCCACTGACACAGAGA +
Preference number: 3 (lower is better)
Translates to: PCWLCTQACFRL*SLPSPLPLTQR
Trigger: TCTCTGTGTCAGTGGAAGCGGACTAGGGAGGGAGCAGAGTCTGAAGCAGGCCTGGGTGCACAGCCAGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR-3UTR CAA 90 bp TGGCTCCTTGGTGGTCAGGCCTGCGCCTCTACCTGTCCTTCAGCTCTCGTGTCAGATACTCGGTGCTCCTaGGCCTCCTGCAGAGTGTCG +
Preference number: 3 (lower is better)
Translates to: WLLGGQACASTCPSALVSDTRCS*ASCRVS
Trigger: CGACACTCTGCAGGAGGCCAAGGAGCACCGAGTATC...TGACACGAGAGCTGAAGGACAGGTAGAGGCGCAGGCCTGACCACCAAGGAGCCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR GCA 72 bp CGGCACTTGAGTGATACTCGGTGCTCCTTGGCCTCCTaGAGAGTGTCGTTGCGCACAGTGGTGCTCAGGCAG +
Preference number: 3 (lower is better)
Translates to: RHLSDTRCSLAS*RVSLRTVVLRQ
Trigger: CTGCCTGAGCACCACTGTGCGCAACGACACTCTGCAGGAGGCCAAGGAGCACCGAGTATCACTCAAGTGCCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR GCA 72 bp GCAGGACATCTGACGCCCGCGGCCAGGGGTGATGGCTaGACAGTGGTGTTTAATGTCCAAGGCACATGCTGT +
Preference number: 3 (lower is better)
Translates to: AGHLTPAARGDG*TVVFNVQGTCC
Trigger: ACAGCATGTGCCTTGGACATTAAACACCACTGTGCAGCCATCACCCCTGGCCGCGGGCGTCAGATGTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR GCA 72 bp TACCTCTGCCTCCCAAGTCCTGGGATTAAAGGCATGTaGCACCACTGCCCGGCCAGGTTGGGGTTCTTGGCA +
Preference number: 3 (lower is better)
Translates to: YLCLPSPGIKGM*HHCPARLGFLA
Trigger: TGCCAAGAACCCCAACCTGGCCGGGCAGTGGTGGCACATGCCTTTAATCCCAGGACTTGGGAGGCAGAGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR CCA 72 bp GGGAAGATGCAGTGGGCACCTGATGCTGCTCTACTGTaGGTGTCAGTGCCACCGTTAGAGGGCGCAGTGAGA +
Preference number: 3 (lower is better)
Translates to: GKMQWAPDAALL*VSVPPLEGAVR
Trigger: TCTCACTGCGCCCTCTAACGGTGGCACTGACACCCACAGTAGAGCAGCATCAGGTGCCCACTGCATCTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000164283.8
ENSMUST00000168741.8
ENSMUST00000169020.8
3UTR CCA 72 bp TATGGGAGGCAGGAGCAGGGCGGCACCGAGGGGGCCTaGGTCTGTGTGGACAGTTCTAGGCACATGATTTAT +
Preference number: 3 (lower is better)
Translates to: YGRQEQGGTEGA*VCVDSSRHMIY
Trigger: ATAAATCATGTGCCTAGAACTGTCCACACAGACCCAGGCCCCCTCGGTGCCGCCCTGCTCCTGCCTCCCATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR TCA 72 bp CAGCTCTTCCACACGAAGCTGCTTGCGGCACTTGAGTaGTACTCGGTGCTCCTTGGCCTCCTGCAGAGTGTC +
Preference number: 3 (lower is better)
Translates to: QLFHTKLLAALE*YSVLLGLLQSV
Trigger: GACACTCTGCAGGAGGCCAAGGAGCACCGAGTATCACTCAAGTGCCGCAAGCAGCTTCGTGTGGAAGAGCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR TCA 72 bp TCTCCAGCTCTTCCACACGAAGCTGCTTGCGGCACTTaGGTGATACTCGGTGCTCCTTGGCCTCCTGCAGAG +
Preference number: 3 (lower is better)
Translates to: SPALPHEAACGT*VILGAPWPPAE
Trigger: CTCTGCAGGAGGCCAAGGAGCACCGAGTATCACTCAAGTGCCGCAAGCAGCTTCGTGTGGAAGAGCTGGAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR TCA 72 bp GCTTCAGACTCTGCTCCCTCCCTAGTCCGCTTCCACTaGCACAGAGAGGCTCACATCTGCACTGAAGTGGGC +
Preference number: 3 (lower is better)
Translates to: ASDSAPSLVRFH*HREAHICTEVG
Trigger: GCCCACTTCAGTGCAGATGTGAGCCTCTCTGTGTCAGTGGAAGCGGACTAGGGAGGGAGCAGAGTCTGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR GCA 72 bp ATACTCGGTGCTCCTTGGCCTCCTGCAGAGTGTCGTTaGGCACAGTGGTGCTCAGGCAGATCACTACGTCCA +
Preference number: 3 (lower is better)
Translates to: ILGAPWPPAECR*AQWCSGRSLRP
Trigger: TGGACGTAGTGATCTGCCTGAGCACCACTGTGCGCAACGACACTCTGCAGGAGGCCAAGGAGCACCGAGTAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR GCA 72 bp ACACGAAGCTGCTTGCGGCACTTGAGTGATACTCGGTaGTCCTTGGCCTCCTGCAGAGTGTCGTTGCGCACA +
Preference number: 3 (lower is better)
Translates to: TRSCLRHLSDTR*SLASCRVSLRT
Trigger: TGTGCGCAACGACACTCTGCAGGAGGCCAAGGAGCACCGAGTATCACTCAAGTGCCGCAAGCAGCTTCGTGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR GCA 72 bp GGACACCGAGGACATGGCCAAGTCTGGATGGGAAGATaGAGTGGGCACCTGATGCTGCTCTACTGTGGGTGT +
Preference number: 3 (lower is better)
Translates to: GHRGHGQVWMGR*SGHLMLLYCGC
Trigger: ACACCCACAGTAGAGCAGCATCAGGTGCCCACTGCATCTTCCCATCCAGACTTGGCCATGTCCTCGGTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000164283.8
ENSMUST00000168741.8
ENSMUST00000169020.8
3UTR CCA 72 bp CCGAGGACATGGCCAAGTCTGGATGGGAAGATGCAGTaGGCACCTGATGCTGCTCTACTGTGGGTGTCAGTG +
Preference number: 3 (lower is better)
Translates to: PRTWPSLDGKMQ*APDAALLWVSV
Trigger: CACTGACACCCACAGTAGAGCAGCATCAGGTGCCCACTGCATCTTCCCATCCAGACTTGGCCATGTCCTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000164283.8
ENSMUST00000168741.8
ENSMUST00000169020.8
3UTR CCA 72 bp GTACATGCCACCCTCTGTACAGCCACTGTGACACCATaGCCCAAACTCGCCAAAGGGGAACTGCAGTGCCTG +
Preference number: 3 (lower is better)
Translates to: VHATLCTATVTP*PKLAKGELQCL
Trigger: CAGGCACTGCAGTTCCCCTTTGGCGAGTTTGGGCCATGGTGTCACAGTGGCTGTACAGAGGGTGGCATGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR TCA 72 bp ATGGCCAAGTCTGGATGGGAAGATGCAGTGGGCACCTaGTGCTGCTCTACTGTGGGTGTCAGTGCCACCGTT +
Preference number: 3 (lower is better)
Translates to: MAKSGWEDAVGT*CCSTVGVSATV
Trigger: AACGGTGGCACTGACACCCACAGTAGAGCAGCATCAGGTGCCCACTGCATCTTCCCATCCAGACTTGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000164283.8
ENSMUST00000168741.8
ENSMUST00000169020.8
3UTR TCA 72 bp CTATGCTCCGGCCCTGTCATCTTCACACTGGAGGAGTaGGGGAAGATGGCTGGGGATCCTGCTCCTGTAAAG +
Preference number: 3 (lower is better)
Translates to: LCSGPVIFTLEE*GKMAGDPAPVK
Trigger: CTTTACAGGAGCAGGATCCCCAGCCATCTTCCCTCACTCCTCCAGTGTGAAGATGACAGGGCCGGAGCATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR GCA 72 bp GGAAGTCTGCCTGTCAGTCAGGAAGTCTGCCTGGCATaGACAGAAAGTCAGGCTTCAATGCCAGCCACGCAC +
Preference number: 3 (lower is better)
Translates to: GSLPVSQEVCLA*TESQASMPATH
Trigger: GTGCGTGGCTGGCATTGAAGCCTGACTTTCTGTGCATGCCAGGCAGACTTCCTGACTGACAGGCAGACTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR GCA 72 bp CTCCCAAGTCCTGGGATTAAAGGCATGTGCCACCACTaGCCGGCCAGGTTGGGGTTCTTGGCAAGTTCATGT +
Preference number: 3 (lower is better)
Translates to: LPSPGIKGMCHH*PARLGFLASSC
Trigger: ACATGAACTTGCCAAGAACCCCAACCTGGCCGGGCAGTGGTGGCACATGCCTTTAATCCCAGGACTTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR CCA 72 bp GCTCCTTGGCCTCCTGCAGAGTGTCGTTGCGCACAGTaGTGCTCAGGCAGATCACTACGTCCACCTTCTTTT +
Preference number: 3 (lower is better)
Translates to: APWPPAECRCAQ*CSGRSLRPPSF
Trigger: AAAAGAAGGTGGACGTAGTGATCTGCCTGAGCACCACTGTGCGCAACGACACTCTGCAGGAGGCCAAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR CCA 72 bp ACAGAGCCTGCACAGAACGCATCTCAGGAAGACACATaGCTCCAGTGCGGCAGCAGCTGTAGGTGCATATGG +
Preference number: 3 (lower is better)
Translates to: TEPAQNASQEDT*LQCGSSCRCIW
Trigger: CCATATGCACCTACAGCTGCTGCCGCACTGGAGCCATGTGTCTTCCTGAGATGCGTTCTGTGCAGGCTCTGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR-3UTR CAA 90 bp TGGCTCCTTGGTGGTCAGGCCTGCGCCTCTACCTGTCCTTCAGCTCTCGTGTCAATCTCAATCCGGTCATaGAGGCGCTTTTTGCACTCT +
Preference number: 3 (lower is better)
Translates to: WLLGGQACASTCPSALVSISIRS*RRFLHS
Trigger: AGAGTGCAAAAAGCGCCTCAATGACCGGATTGAGAT...TGACACGAGAGCTGAAGGACAGGTAGAGGCGCAGGCCTGACCACCAAGGAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR CCA 72 bp GGTCAGGAAGTCTGCCTGTCAGTCAGGAAGTCTGCCTaGCATGCACAGAAAGTCAGGCTTCAATGCCAGCCA +
Preference number: 3 (lower is better)
Translates to: GQEVCLSVRKSA*HAQKVRLQCQP
Trigger: TGGCTGGCATTGAAGCCTGACTTTCTGTGCATGCCAGGCAGACTTCCTGACTGACAGGCAGACTTCCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR TCA 72 bp TCTCTGCATTCCACAGCTAAGTCATCGAGATGGTCCTaGAGGCACTCAAGCTCCTGCCCAGTCTCCGTCTTC +
Preference number: 3 (lower is better)
Translates to: SLHSTAKSSRWS*RHSSSCPVSVF
Trigger: GAAGACGGAGACTGGGCAGGAGCTTGAGTGCCTTCAGGACCATCTCGATGACTTAGCTGTGGAATGCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR TCA 72 bp CTCCTGGATGATGATACGGATCTGGTCCTCACAGTCTaGGGACAGGCGCTGGTCAGCATATCTCAGCTTGAG +
Preference number: 3 (lower is better)
Translates to: LLDDDTDLVLTV*GQALVSISQLE
Trigger: CTCAAGCTGAGATATGCTGACCAGCGCCTGTCCTCAGACTGTGAGGACCAGATCCGTATCATCATCCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR TCA 72 bp CCGCTTCCACTGACACAGAGAGGCTCACATCTGCACTaGAGTGGGCGACACAGAAATGCCTGTTGCTATGAG +
Preference number: 3 (lower is better)
Translates to: PLPLTQRGSHLH*SGRHRNACCYE
Trigger: CTCATAGCAACAGGCATTTCTGTGTCGCCCACTTCAGTGCAGATGTGAGCCTCTCTGTGTCAGTGGAAGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR GCA 72 bp ATGTCCTCTGTCATCTCCAGCTCTTCCACACGAAGCTaGTTGCGGCACTTGAGTGATACTCGGTGCTCCTTG +
Preference number: 3 (lower is better)
Translates to: MSSVISSSSTRS*LRHLSDTRCSL
Trigger: CAAGGAGCACCGAGTATCACTCAAGTGCCGCAAGCAGCTTCGTGTGGAAGAGCTGGAGATGACAGAGGACAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR GCA 72 bp GAGGAAACAGACATGTCAATGATCAGGCACGGGATATaGATCGCTCCTCCAAGTCCTGCTGACACCTGCTGC +
Preference number: 3 (lower is better)
Translates to: EETDMSMIRHGI*IAPPSPADTCC
Trigger: GCAGCAGGTGTCAGCAGGACTTGGAGGAGCGATGCATATCCCGTGCCTGATCATTGACATGTCTGTTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR CCA 72 bp GGCGGGGGTTCTGGAAGTCACACTGATGCACAAGAGTaGATGCTCTCTAGGAAGGCCGAGGATACTAATCAC +
Preference number: 3 (lower is better)
Translates to: GGGSGSHTDAQE*MLSRKAEDTNH
Trigger: GTGATTAGTATCCTCGGCCTTCCTAGAGAGCATCCACTCTTGTGCATCAGTGTGACTTCCAGAACCCCCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR TCA 72 bp TTAGTTTGTCTGGTTCTTGGCTCATTGACAGATTTCTaGCCTGGTCCACAGATGCCCTGTCCCTGGCCCAGG +
Preference number: 3 (lower is better)
Translates to: LVCLVLGSLTDF*PGPQMPCPWPR
Trigger: CCTGGGCCAGGGACAGGGCATCTGTGGACCAGGTCAGAAATCTGTCAATGAGCCAAGAACCAGACAAACTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR GCA 72 bp AGGTTGACCTTCAGGCACTCTTCCACTTGGCCTGTTTaGTCCTGGGCTGCTGCTTCTTCAGCACATAGATTG +
Preference number: 3 (lower is better)
Translates to: RLTFRHSSTWPV*SWAAASSAHRL
Trigger: CAATCTATGTGCTGAAGAAGCAGCAGCCCAGGAGCAAACAGGCCAAGTGGAAGAGTGCCTGAAGGTCAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR GCA 72 bp AAGTCTGCCTGGCATGCACAGAAAGTCAGGCTTCAATaGCAGCCACGCACCCGAGATCACGCTAAATCTTCA +
Preference number: 3 (lower is better)
Translates to: KSAWHAQKVRLQ*QPRTRDHAKSS
Trigger: TGAAGATTTAGCGTGATCTCGGGTGCGTGGCTGGCATTGAAGCCTGACTTTCTGTGCATGCCAGGCAGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR GCA 72 bp TTTAGAGGCACAAAGGAGCTTGTTGGTCAGGAAGTCTaGCTGTCAGTCAGGAAGTCTGCCTGGCATGCACAG +
Preference number: 3 (lower is better)
Translates to: FRGTKELVGQEV*LSVRKSAWHAQ
Trigger: CTGTGCATGCCAGGCAGACTTCCTGACTGACAGGCAGACTTCCTGACCAACAAGCTCCTTTGTGCCTCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR GCA 72 bp CAGTCAAGTCCAGGGACCGGGTTAAAAGAAATGTCTTaGTCCTGGAGTCCCTTCACTAGAAGCAGCCCCATC +
Preference number: 3 (lower is better)
Translates to: QSSPGTGLKEMS*SWSPFTRSSPI
Trigger: GATGGGGCTGCTTCTAGTGAAGGGACTCCAGGAGCAAGACATTTCTTTTAACCCGGTCCCTGGACTTGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR GCA 72 bp CAGGACTGGAAATGGTGGCCAGAAGTTCTCTGGGAATaGAGAGAGTTAAGGCTTTCCCAGGGTCAGACTGCT +
Preference number: 3 (lower is better)
Translates to: QDWKWWPEVLWE*RELRLSQGQTA
Trigger: AGCAGTCTGACCCTGGGAAAGCCTTAACTCTCTGCATTCCCAGAGAACTTCTGGCCACCATTTCCAGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR CCA 72 bp GCACACTTCTCGTTCATGTCCTTCTGGTGCTTGTTCTaGATCAGACACTCCATCAGGTCCCCAGAGTCGATC +
Preference number: 3 (lower is better)
Translates to: AHFSFMSFWCLF*IRHSIRSPESI
Trigger: GATCGACTCTGGGGACCTGATGGAGTGTCTGATCCAGAACAAGCACCAGAAGGACATGAACGAGAAGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR CCA 72 bp CATCTCAATCCGGTCATTGAGGCGCTTTTTGCACTCTaGCTGCAATCTCACTCGCTTATCTTCCAGGGCCTC +
Preference number: 3 (lower is better)
Translates to: HLNPVIEALFAL*LQSHSLIFQGL
Trigger: GAGGCCCTGGAAGATAAGCGAGTGAGATTGCAGCCAGAGTGCAAAAAGCGCCTCAATGACCGGATTGAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR CCA 72 bp AAACCCACCAAACCTCCAAATCTGCTGCAGGCAGTGTaGATTCCTGTCAGTGCAGAAGCAGCAGTGCTGAGA +
Preference number: 3 (lower is better)
Translates to: KPTKPPNLLQAV*IPVSAEAAVLR
Trigger: TCTCAGCACTGCTGCTTCTGCACTGACAGGAATCCACACTGCCTGCAGCAGATTTGGAGGTTTGGTGGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR CCA 72 bp CAGAACCAGGACTGGAAATGGTGGCCAGAAGTTCTCTaGGAATGCAGAGAGTTAAGGCTTTCCCAGGGTCAG +
Preference number: 3 (lower is better)
Translates to: QNQDWKWWPEVL*ECRELRLSQGQ
Trigger: CTGACCCTGGGAAAGCCTTAACTCTCTGCATTCCCAGAGAACTTCTGGCCACCATTTCCAGTCCTGGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR-3UTR CAA 90 bp TCCCTTCATTTAGAGGCACAAAGGAGCTTGTTGGTCAGGAAGTCTGCCTGTCAGCAGCTCTATCCCATCTaGGAGGAAGAGGATGGCTGG +
Preference number: 3 (lower is better)
Translates to: SLHLEAQRSLLVRKSACQQLYPI*EEEDGW
Trigger: CCAGCCATCCTCTTCCTCCAAGATGGGATAGAGCTG...CTGACAGGCAGACTTCCTGACCAACAAGCTCCTTTGTGCCTCTAAATGAAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR-3UTR CAA 90 bp CCTTGGTGGTCAGGCCTGCGCCTCTACCTGTCCTTCAGCTCTCGTGTCACTCTCTTGGTTATCATCTGTTaGCATTTGGGATCCATCAAT +
Preference number: 3 (lower is better)
Translates to: PWWSGLRLYLSFSSRVTLLVIIC*HLGSIN
Trigger: ATTGATGGATCCCAAATGCAAACAGATGATAACCAA...GAGAGTGACACGAGAGCTGAAGGACAGGTAGAGGCGCAGGCCTGACCACCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR TCA 72 bp CCTTGGCTGCATAACTCCACATCTCAATCCGGTCATTaGGGCGCTTTTTGCACTCTGGCTGCAATCTCACTC +
Preference number: 3 (lower is better)
Translates to: PWLHNSTSQSGH*GAFCTLAAISL
Trigger: GAGTGAGATTGCAGCCAGAGTGCAAAAAGCGCCTCAATGACCGGATTGAGATGTGGAGTTATGCAGCCAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR TCA 72 bp TCTACCTGTCCTTCAGCTCTCGTGTCACTCTCTTGGTaGTCCGTCCACACATCAGGCCAATCAGGAAGAGTA +
Preference number: 3 (lower is better)
Translates to: STCPSALVSLSW*SVHTSGQSGRV
Trigger: TACTCTTCCTGATTGGCCTGATGTGTGGACGGATCACCAAGAGAGTGACACGAGAGCTGAAGGACAGGTAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR TCA 72 bp GTCAGTCAGGTGAGACACAGAGTGATTTGGAGCAACTaGCAGAGCCTGCACAGAACGCATCTCAGGAAGACA +
Preference number: 3 (lower is better)
Translates to: VSQVRHRVIWSN*QSLHRTHLRKT
Trigger: TGTCTTCCTGAGATGCGTTCTGTGCAGGCTCTGTCAGTTGCTCCAAATCACTCTGTGTCTCACCTGACTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR GCA 72 bp GATGGCTGCACAGTGGTGTTTAATGTCCAAGGCACATaGTGTGTGAAGAACGGGGTCCACAAAGATGTCTGC +
Preference number: 3 (lower is better)
Translates to: DGCTVVFNVQGT*CVKNGVHKDVC
Trigger: GCAGACATCTTTGTGGACCCCGTTCTTCACACAGCATGTGCCTTGGACATTAAACACCACTGTGCAGCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR GCA 72 bp TCCAAATCTGCTGCAGGCAGTGTGGATTCCTGTCAGTaGAGAAGCAGCAGTGCTGAGACACACATCATATGC +
Preference number: 3 (lower is better)
Translates to: SKSAAGSVDSCQ*RSSSAETHIIC
Trigger: GCATATGATGTGTGTCTCAGCACTGCTGCTTCTGCACTGACAGGAATCCACACTGCCTGCAGCAGATTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR-3UTR CAA 90 bp ATCCGGTCATTGAGGCGCTTTTTGCACTCTGGCTGCAATCTCACTCGCTTATCTTTGATCTTGAGCAGGTaGACCTTCAGGCACTCTTCC +
Preference number: 3 (lower is better)
Translates to: IRSLRRFLHSGCNLTRLSLILSR*TFRHSS
Trigger: GGAAGAGTGCCTGAAGGTCAACCTGCTCAAGATCAA...AGATAAGCGAGTGAGATTGCAGCCAGAGTGCAAAAAGCGCCTCAATGACCGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR TCA 72 bp TCAGGCCAATCAGGAAGAGTATGCAGATGCTCCCGCTaGTCACAGACAGGATGTAGTTCTTTGAGGGAGATG +
Preference number: 3 (lower is better)
Translates to: SGQSGRVCRCSR*SQTGCSSLREM
Trigger: CATCTCCCTCAAAGAACTACATCCTGTCTGTGATCAGCGGGAGCATCTGCATACTCTTCCTGATTGGCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR TCA 72 bp CAAAGTTGCTTCTGGGAGAGGAAACAGACATGTCAATaGTCAGGCACGGGATATGCATCGCTCCTCCAAGTC +
Preference number: 3 (lower is better)
Translates to: QSCFWERKQTCQ*SGTGYASLLQV
Trigger: GACTTGGAGGAGCGATGCATATCCCGTGCCTGATCATTGACATGTCTGTTTCCTCTCCCAGAAGCAACTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR TCA 72 bp TCCAGGGAACCCCACATTTATGAGGGTTCATCAAGATaGGGCAGCTCTATCCCATCTTGGAGGAAGAGGATG +
Preference number: 3 (lower is better)
Translates to: SREPHIYEGSSR*GSSIPSWRKRM
Trigger: CATCCTCTTCCTCCAAGATGGGATAGAGCTGCCTCATCTTGATGAACCCTCATAAATGTGGGGTTCCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR TCA 72 bp GTCGAGGTAGAGAACTTCCAGGGAACCCCACATTTATaGGGGTTCATCAAGATGAGGCAGCTCTATCCCATC +
Preference number: 3 (lower is better)
Translates to: VEVENFQGTPHL*GFIKMRQLYPI
Trigger: GATGGGATAGAGCTGCCTCATCTTGATGAACCCTCATAAATGTGGGGTTCCCTGGAAGTTCTCTACCTCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR TCA 72 bp AGCACATACCGGAAGGGAGCCACAGGATCAGAGCTATaGTTCTACCCCCGTCTAACTGTGGAACATCAATGT +
Preference number: 3 (lower is better)
Translates to: STYRKGATGSEL*FYPRLTVEHQC
Trigger: ACATTGATGTTCCACAGTTAGACGGGGGTAGAATCATAGCTCTGATCCTGTGGCTCCCTTCCGGTATGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR TCA 72 bp CAGTGTGGATTCCTGTCAGTGCAGAAGCAGCAGTGCTaGGACACACATCATATGCTAAGCACATACCGGAAG +
Preference number: 3 (lower is better)
Translates to: QCGFLSVQKQQC*DTHHMLSTYRK
Trigger: CTTCCGGTATGTGCTTAGCATATGATGTGTGTCTCAGCACTGCTGCTTCTGCACTGACAGGAATCCACACTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR GCA 72 bp TCAAATTCACCAAACCCACCAAACCTCCAAATCTGCTaGAGGCAGTGTGGATTCCTGTCAGTGCAGAAGCAG +
Preference number: 3 (lower is better)
Translates to: SNSPNPPNLQIC*RQCGFLSVQKQ
Trigger: CTGCTTCTGCACTGACAGGAATCCACACTGCCTGCAGCAGATTTGGAGGTTTGGTGGGTTTGGTGAATTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR GCA 72 bp AACTTTCTGCCAACTCGTCTGGGACAGTGGACTGCATaGTCCTATCTAAGAACAGGAGGTGGTAGTCATGGT +
Preference number: 3 (lower is better)
Translates to: NFLPTRLGQWTA*SYLRTGGGSHG
Trigger: ACCATGACTACCACCTCCTGTTCTTAGATAGGAGCATGCAGTCCACTGTCCCAGACGAGTTGGCAGAAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR GCA 72 bp GGGGTTCTGGAAGTCACACTGATGCACAAGAGTGGATaGTCTCTAGGAAGGCCGAGGATACTAATCACACAA +
Preference number: 3 (lower is better)
Translates to: GVLEVTLMHKSG*SLGRPRILITQ
Trigger: TTGTGTGATTAGTATCCTCGGCCTTCCTAGAGAGCATCCACTCTTGTGCATCAGTGTGACTTCCAGAACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR CCA 72 bp GGATGTAGTTCTTTGAGGGAGATGTCATCACTTGCATaGCAAGATCAGAGAAGCCATCTGCTGGAGCCACCT +
Preference number: 3 (lower is better)
Translates to: GCSSLREMSSLA*QDQRSHLLEPP
Trigger: AGGTGGCTCCAGCAGATGGCTTCTCTGATCTTGCCATGCAAGTGATGACATCTCCCTCAAAGAACTACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR CCA 72 bp AGTCCAGGGACCGGGTTAAAAGAAATGTCTTGCTCCTaGAGTCCCTTCACTAGAAGCAGCCCCATCAGAAAA +
Preference number: 3 (lower is better)
Translates to: SPGTGLKEMSCS*SPFTRSSPIRK
Trigger: TTTTCTGATGGGGCTGCTTCTAGTGAAGGGACTCCAGGAGCAAGACATTTCTTTTAACCCGGTCCCTGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR-3UTR CAA 90 bp CAGGCGGTAATCCAGAGCAGACTCCTGGATGATGATACGGATCTGGTCCTCACATTTAACACATCCTCCTaGCAGGCCATTTTGAACTTG +
Preference number: 3 (lower is better)
Translates to: QAVIQSRLLDDDTDLVLTFNTSS*QAILNL
Trigger: CAAGTTCAAAATGGCCTGCAAGGAGGATGTGTTAAA...TGTGAGGACCAGATCCGTATCATCATCCAGGAGTCTGCTCTGGATTACCGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR TCA 72 bp GAGAATCGAAAATCCTTCATCTGTACCAGCTGGAAGTaGGTGACGCCAATGGCACACTTCTCGTTCATGTCC +
Preference number: 3 (lower is better)
Translates to: ENRKSFICTSWK*VTPMAHFSFMS
Trigger: GGACATGAACGAGAAGTGTGCCATTGGCGTCACTCACTTCCAGCTGGTACAGATGAAGGATTTTCGATTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR TCA 72 bp AGCTCTGAATCGTCCTTAGCCTTGGTCAGGATGCCATaGCAGAACTTAGGAATGTCAGCTTTACAGGCCTTC +
Preference number: 3 (lower is better)
Translates to: SSESSLALVRMP*QNLGMSALQAF
Trigger: GAAGGCCTGTAAAGCTGACATTCCTAAGTTCTGTCATGGCATCCTGACCAAGGCTAAGGACGATTCAGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR TCA 72 bp GCACAGTGGTGTTTAATGTCCAAGGCACATGCTGTGTaGAGAACGGGGTCCACAAAGATGTCTGCTTTGCTT +
Preference number: 3 (lower is better)
Translates to: AQWCLMSKAHAV*RTGSTKMSALL
Trigger: AAGCAAAGCAGACATCTTTGTGGACCCCGTTCTTCACACAGCATGTGCCTTGGACATTAAACACCACTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR TCA 72 bp GATGCTCCCGCTGATCACAGACAGGATGTAGTTCTTTaGGGGAGATGTCATCACTTGCATGGCAAGATCAGA +
Preference number: 3 (lower is better)
Translates to: DAPADHRQDVVL*GRCHHLHGKIR
Trigger: TCTGATCTTGCCATGCAAGTGATGACATCTCCCTCAAAGAACTACATCCTGTCTGTGATCAGCGGGAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR TCA 72 bp CAGGCACGGGATATGCATCGCTCCTCCAAGTCCTGCTaGCACCTGCTGCATTTACATGAAAGAATAATCCTA +
Preference number: 3 (lower is better)
Translates to: QARDMHRSSKSC*HLLHLHERIIL
Trigger: TAGGATTATTCTTTCATGTAAATGCAGCAGGTGTCAGCAGGACTTGGAGGAGCGATGCATATCCCGTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR GCA 72 bp AGGTTGTCAGATCACCAAAATGTAACACTGAGCCAGTaGCTACTGGAGTGGGTACACGCAGCAAATGAACAG +
Preference number: 3 (lower is better)
Translates to: RLSDHQNVTLSQ*LLEWVHAANEQ
Trigger: CTGTTCATTTGCTGCGTGTACCCACTCCAGTAGGCACTGGCTCAGTGTTACATTTTGGTGATCTGACAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR GCA 72 bp GAATCAAATTCACCAAACCCACCAAACCTCCAAATCTaGTGCAGGCAGTGTGGATTCCTGTCAGTGCAGAAG +
Preference number: 3 (lower is better)
Translates to: ESNSPNPPNLQI*CRQCGFLSVQK
Trigger: CTTCTGCACTGACAGGAATCCACACTGCCTGCAGCAGATTTGGAGGTTTGGTGGGTTTGGTGAATTTGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR CCA 72 bp GTTCTTGATGTCACTCTTGCAGGCTTCATACAGATCTaGTTCCAAACGGATGTCCTCTGTCATCTCCAGCTC +
Preference number: 3 (lower is better)
Translates to: VLDVTLAGFIQI*FQTDVLCHLQL
Trigger: GAGCTGGAGATGACAGAGGACATCCGTTTGGAACCAGATCTGTATGAAGCCTGCAAGAGTGACATCAAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR CCA 72 bp CACCAAAATGTAACACTGAGCCAGTGCCTACTGGAGTaGGTACACGCAGCAAATGAACAGAAAGGAGGGAAA +
Preference number: 3 (lower is better)
Translates to: HQNVTLSQCLLE*VHAANEQKGGK
Trigger: TTTCCCTCCTTTCTGTTCATTTGCTGCGTGTACCCACTCCAGTAGGCACTGGCTCAGTGTTACATTTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR TCA 72 bp AAGCTTCTATTTGTATATCCTCGGACTCTAACTCGGTaGGGTTGCCCACGATGTCTCTGCATTCCACAGCTA +
Preference number: 3 (lower is better)
Translates to: KLLFVYPRTLTR*GCPRCLCIPQL
Trigger: TAGCTGTGGAATGCAGAGACATCGTGGGCAACCTCACCGAGTTAGAGTCCGAGGATATACAAATAGAAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR TCA 72 bp ATCGAAAATCCTTCATCTGTACCAGCTGGAAGTGAGTaGCGCCAATGGCACACTTCTCGTTCATGTCCTTCT +
Preference number: 3 (lower is better)
Translates to: IENPSSVPAGSE*RQWHTSRSCPS
Trigger: AGAAGGACATGAACGAGAAGTGTGCCATTGGCGTCACTCACTTCCAGCTGGTACAGATGAAGGATTTTCGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR CCA 72 bp TCCATCATCTCCGTCTCCTGCAGCTTAAATACTTTCTaGTGGCAACGGGTACTCAGCTGCTTCTTGTTTTCT +
Preference number: 3 (lower is better)
Translates to: SIISVSCSLNTF*WQRVLSCFLFS
Trigger: AGAAAACAAGAAGCAGCTGAGTACCCGTTGCCACCAGAAAGTATTTAAGCTGCAGGAGACGGAGATGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR TCA 72 bp TTAGCACAGGGTTTAAGCGGTAATCTGTGTTCTGGGTaGTCTGGCGCTTGGTTATCATCTGTTTGCATTTGG +
Preference number: 3 (lower is better)
Translates to: LAQGLSGNLCSG*SGAWLSSVCIW
Trigger: CCAAATGCAAACAGATGATAACCAAGCGCCAGATCACCCAGAACACAGATTACCGCTTAAACCCTGTGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR TCA 72 bp ATACTAATCACACAACTCCACCCTCGTCCTAGTGTCTaGGAAGCAGAGCATCTTCCATCAGCTGATTTCAAC +
Preference number: 3 (lower is better)
Translates to: ILITQLHPRPSV*EAEHLPSADFN
Trigger: GTTGAAATCAGCTGATGGAAGATGCTCTGCTTCTCAGACACTAGGACGAGGGTGGAGTTGTGTGATTAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR CCA 72 bp ATCATCTCCGTCTCCTGCAGCTTAAATACTTTCTGGTaGCAACGGGTACTCAGCTGCTTCTTGTTTTCTTTT +
Preference number: 3 (lower is better)
Translates to: IISVSCSLNTFW*QRVLSCFLFSF
Trigger: AAAAGAAAACAAGAAGCAGCTGAGTACCCGTTGCCACCAGAAAGTATTTAAGCTGCAGGAGACGGAGATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR TCA 72 bp TTCTTGGCAAGTTCATGTCTATCTAATTTATACCCATaGCTGACTTATGAGGGCACAGAGCCCACCCTACTA +
Preference number: 3 (lower is better)
Translates to: FLASSCLSNLYP*LTYEGTEPTLL
Trigger: TAGTAGGGTGGGCTCTGTGCCCTCATAAGTCAGTCATGGGTATAAATTAGATAGACATGAACTTGCCAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR GCA 72 bp CTGTGTGAAGAACGGGGTCCACAAAGATGTCTGCTTTaGTTTCCTTCAACATGTTTAACACTTCCTTTTTAC +
Preference number: 3 (lower is better)
Translates to: LCEERGPQRCLL*FPSTCLTLPFY
Trigger: GTAAAAAGGAAGTGTTAAACATGTTGAAGGAAAGCAAAGCAGACATCTTTGTGGACCCCGTTCTTCACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR TCA 72 bp GGCAAAGCTTTAACACATCCTCCTTGCAGGCCATTTTaGACTTGTAAGAGAATCGAAAATCCTTCATCTGTA +
Preference number: 3 (lower is better)
Translates to: GKALTHPPCRPF*TCKRIENPSSV
Trigger: TACAGATGAAGGATTTTCGATTCTCTTACAAGTTCAAAATGGCCTGCAAGGAGGATGTGTTAAAGCTTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR CAA 72 bp AGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTaGGTGGTCAGGCCTGCGCCTCTACCTGTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: RTAVQAGPGGGS*VVRPAPLPVLQ
Trigger: CTGAAGGACAGGTAGAGGCGCAGGCCTGACCACCAAGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
CDS-3UTR GCA 90 bp GTACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTTGGTGGATTCTGGGCCCCTGCTaGCGCGAGCAGCAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: VHYTGRLYRRARAVAPWWILGPC*REQQQR
Trigger: CCGCTGCTGCTGCTCGCGGCAGCAGGGGCCCAGAAT...CCACCAAGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp GTGAGAGGGTACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTGCCGCCTCCACCTTaGCCTGGGAAGGGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: VRGYTIQDGCTGGPGRWLLPPPP*PGKGPK
Trigger: CTTTGGGCCCTTCCCAGGGCAAGGTGGAGGCGGCAG...GAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTACCCTCTCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp TGCAAGGGCAGCTGGGAGGAGGAGGAGGAGGAGGACACCGAGGACATGGCCAAGGGCTCCCTCACGTCCTaGAGGCACTCGAGCACCGCC +
Preference number: 4 (lower is better)
Translates to: CKGSWEEEEEEDTEDMAKGSLTS*RHSSTA
Trigger: GGCGGTGCTCGAGTGCCTGCAGGACGTGAGGGAGCC...CTTGGCCATGTCCTCGGTGTCCTCCTCCTCCTCCTCCTCCCAGCTGCCCTTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp GTACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTTGGTGGCTGGTCCTCACAGTCTaGGGACAGGCGCTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: VHYTGRLYRRARAVAPWWLVLTV*GQALVS
Trigger: GCTGACCAGCGCCTGTCCTCAGACTGTGAGGACCAG...CCACCAAGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp TATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTTGGTGGTCAGGCGCACCGCCAGGTTGTTaGTCCAGGTGTGTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: YTGRLYRRARAVAPWWSGAPPGC*SRCVWG
Trigger: GCCCCAAACACACCTGGAGCAACAACCTGGCGGTGC...GCCTGACCACCAAGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp TATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTTGGTGGTCAGGCCGGACTCTAACTCGGTaGGGTTGCCCACGATGTCTC +
Preference number: 4 (lower is better)
Translates to: YTGRLYRRARAVAPWWSGRTLTR*GCPRCL
Trigger: GAGACATCGTGGGCAACCTCACCGAGTTAGAGTCCG...GCCTGACCACCAAGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp TCGCCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCGCCCGCGGCCAGGGGTaGTGGCTGCACAGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: SPTKATTKAASCRRCKGSARGQG*WLHSGV
Trigger: AACACCACTGTGCAGCCATCACCCCTGGCCGCGGGC...GCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp GTACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTTGGTGGCACCTTGGCACTCACTaGTCACCTGCCGCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: VHYTGRLYRRARAVAPWWHLGTH*SPAALC
Trigger: ACAGAGGGCGGCAGGTGAGCAGTGAGTGCCAAGGTG...CCACCAAGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp TATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTTGGTGGTCAGGCGTGTCACTCTCTTGGTaGTCCGTCCACACATCAGGC +
Preference number: 4 (lower is better)
Translates to: YTGRLYRRARAVAPWWSGVSLSW*SVHTSG
Trigger: GCCTGATGTGTGGACGGATCACCAAGAGAGTGACAC...GCCTGACCACCAAGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp TCGCCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCGGAAGGGCCCAAAGTTaGTCCCCGGACCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SPTKATTKAASCRRCKGSGRAQS*SPDPGP
Trigger: AGGGCCAGGGTCCGGGGACCAACTTTGGGCCCTTCC...GCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp GCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGGGAGGAGGAGTCATCGAGATGGTCCTaGAGGCACTCAAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: ATTKAASCRRCKGSWEEESSRWS*RHSSSC
Trigger: GCAGGAGCTTGAGTGCCTTCAGGACCATCTCGATGA...CTCCTCCTCCCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp GTGAGAGGGTACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCCAGCTGGAAGTGAGTaGCGCCAATGGCACACTTCT +
Preference number: 4 (lower is better)
Translates to: VRGYTIQDGCTGGPGRWLPAGSE*RQWHTS
Trigger: AGAAGTGTGCCATTGGCGTCACTCACTTCCAGCTGG...GAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTACCCTCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp CGCCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTCTGGTCCTCACAGTCTaGGGACAGGCGCTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: RQQKLPPKQPAADAARAALVLTV*GQALVS
Trigger: GCTGACCAGCGCCTGTCCTCAGACTGTGAGGACCAG...AGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp GCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGGGAGGAGGAGCGTTGCGCACAGTGGTaGTCAGGCAGATCACTACGT +
Preference number: 4 (lower is better)
Translates to: ATTKAASCRRCKGSWEEERCAQW*SGRSLR
Trigger: ACGTAGTGATCTGCCTGAGCACCACTGTGCGCAACG...CTCCTCCTCCCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp GCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGGGAGGAGGAGTCCACTTGGCCTGTTTaGTCCTGGGCTGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: ATTKAASCRRCKGSWEEESTWPV*SWAAAS
Trigger: AGAAGCAGCAGCCCAGGAGCAAACAGGCCAAGTGGA...CTCCTCCTCCCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp AGGAGGAGGAGGAGGACACCGAGGACATGGCCAAGTCTGGATGGGAAGATGCAGGGAAGGGCCCAAAGTTaGTCCCCGGACCCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: RRRRRTPRTWPSLDGKMQGRAQS*SPDPGP
Trigger: AGGGCCAGGGTCCGGGGACCAACTTTGGGCCCTTCC...CTGCATCTTCCCATCCAGACTTGGCCATGTCCTCGGTGTCCTCCTCCTCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp TGCAAGGGCAGCTGGGAGGAGGAGGAGGAGGAGGACACCGAGGACATGGCCAAGTGTACCAGCTGGAAGTaGGTGACGCCAATGGCACAC +
Preference number: 4 (lower is better)
Translates to: CKGSWEEEEEEDTEDMAKCTSWK*VTPMAH
Trigger: GTGTGCCATTGGCGTCACTCACTTCCAGCTGGTACA...CTTGGCCATGTCCTCGGTGTCCTCCTCCTCCTCCTCCTCCCAGCTGCCCTTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp TGCAAGGGCAGCTGGGAGGAGGAGGAGGAGGAGGACACCGAGGACATGGCCAAGGTGTCACTCTCTTGGTaGTCCGTCCACACATCAGGC +
Preference number: 4 (lower is better)
Translates to: CKGSWEEEEEEDTEDMAKVSLSW*SVHTSG
Trigger: GCCTGATGTGTGGACGGATCACCAAGAGAGTGACAC...CTTGGCCATGTCCTCGGTGTCCTCCTCCTCCTCCTCCTCCCAGCTGCCCTTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp CAAGTCTGGATGGGAAGATGCAGTGGGCACCTGATGCTGCTCTACTGTGGGTGTATTCTGGGCCCCTGCTaGCGCGAGCAGCAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: QVWMGRCSGHLMLLYCGCILGPC*REQQQR
Trigger: CCGCTGCTGCTGCTCGCGGCAGCAGGGGCCCAGAAT...ACACCCACAGTAGAGCAGCATCAGGTGCCCACTGCATCTTCCCATCCAGACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp GCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGGGAGGAGGAGTTGAGTGATACTCGGTaGTCCTTGGCCTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: ATTKAASCRRCKGSWEEELSDTR*SLASCR
Trigger: TCTGCAGGAGGCCAAGGAGCACCGAGTATCACTCAA...CTCCTCCTCCCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp GTGAGAGGGTACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCGCCAGGGGTGATGGCTaGACAGTGGTGTTTAATGTC +
Preference number: 4 (lower is better)
Translates to: VRGYTIQDGCTGGPGRWLARGDG*TVVFNV
Trigger: GACATTAAACACCACTGTGCAGCCATCACCCCTGGC...GAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTACCCTCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp TACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTTGGTGGTTCCAGCATCTCACCTTaGCACTCACTGCTCACCTGC +
Preference number: 4 (lower is better)
Translates to: YTIQDGCTGGPGRWLLGGSSISP*HSLLTC
Trigger: GCAGGTGAGCAGTGAGTGCCAAGGTGAGATGCTGGA...ACCACCAAGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp TACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTTGGTGGTACATCCATGGCTCGCTaGTGCAGGATCCTCTGGACT +
Preference number: 4 (lower is better)
Translates to: YTIQDGCTGGPGRWLLGGTSMAR*CRILWT
Trigger: AGTCCAGAGGATCCTGCACCAGCGAGCCATGGATGT...ACCACCAAGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000164283.8
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp GAGAGGGTACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTATGAGGCACTTGTCCTaGAGGGCAGGATCCAGCTTA +
Preference number: 4 (lower is better)
Translates to: ERVHYTGRLYRRARAVAPMRHLS*RAGSSL
Trigger: TAAGCTGGATCCTGCCCTCCAGGACAAGTGCCTCAT...AGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTACCCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000164283.8
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp ACCATGGCCCAAACTCGCCAAAGGGGAACTGCAGTGCCTGGGCTCCTCCCTCCTCCAGCTGGAAGTGAGTaGCGCCAATGGCACACTTCT +
Preference number: 4 (lower is better)
Translates to: TMAQTRQRGTAVPGLLPPPAGSE*RQWHTS
Trigger: AGAAGTGTGCCATTGGCGTCACTCACTTCCAGCTGG...AGGAGGGAGGAGCCCAGGCACTGCAGTTCCCCTTTGGCGAGTTTGGGCCATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp AATCTGCTGCAGGCAGTGTGGATTCCTGTCAGTGCAGAAGCAGCAGTGCTGAGAGCCCGCGGCCAGGGGTaGTGGCTGCACAGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: NLLQAVWIPVSAEAAVLRARGQG*WLHSGV
Trigger: AACACCACTGTGCAGCCATCACCCCTGGCCGCGGGC...TCTCAGCACTGCTGCTTCTGCACTGACAGGAATCCACACTGCCTGCAGCAGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp GAGAGGGTACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTTCTCAATCCGGTCATTaGGGCGCTTTTTGCACTCTG +
Preference number: 4 (lower is better)
Translates to: ERVHYTGRLYRRARAVAPSQSGH*GAFCTL
Trigger: CAGAGTGCAAAAAGCGCCTCAATGACCGGATTGAGA...AGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTACCCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp TACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTTGGTGGTATCAATGCGGTAGTCTaGACCAGGGTCAGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: YTIQDGCTGGPGRWLLGGINAVV*TRVSLL
Trigger: CAGGAGACTGACCCTGGTGCAGACTACCGCATTGAT...ACCACCAAGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp AGGAGGACACCGAGGACATGGCCAAGTCTGGATGGGAAGATGCAGTGGGCACCTCCTGCAGAGTGTCGTTaGGCACAGTGGTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: RRTPRTWPSLDGKMQWAPPAECR*AQWCSG
Trigger: GCCTGAGCACCACTGTGCGCAACGACACTCTGCAGG...AGGTGCCCACTGCATCTTCCCATCCAGACTTGGCCATGTCCTCGGTGTCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp GCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGGGAGGAGGAGACTTTCATCAGACAGTaGAGGGTTCGCCCTTTCCGA +
Preference number: 4 (lower is better)
Translates to: ATTKAASCRRCKGSWEEETFIRQ*RVRPFR
Trigger: TCGGAAAGGGCGAACCCTCCACTGTCTGATGAAAGT...CTCCTCCTCCCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR CAA 72 bp GATACTCGGTGCTCCTTGGCCTCCTGCAGAGTGTCGTaGCGCACAGTGGTGCTCAGGCAGATCACTACGTCC +
Preference number: 4 (lower is better)
Translates to: DTRCSLASCRVS*RTVVLRQITTS
Trigger: GGACGTAGTGATCTGCCTGAGCACCACTGTGCGCAACGACACTCTGCAGGAGGCCAAGGAGCACCGAGTATC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR CAA 72 bp AGCTGCTTGCGGCACTTGAGTGATACTCGGTGCTCCTaGGCCTCCTGCAGAGTGTCGTTGCGCACAGTGGTG +
Preference number: 4 (lower is better)
Translates to: SCLRHLSDTRCS*ASCRVSLRTVV
Trigger: CACCACTGTGCGCAACGACACTCTGCAGGAGGCCAAGGAGCACCGAGTATCACTCAAGTGCCGCAAGCAGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
CDS-3UTR TCA 90 bp GAGAGGGTACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTTTTTGCAGTCATCCATaGAGCCGCAGATCAAGCGAT +
Preference number: 4 (lower is better)
Translates to: ERVHYTGRLYRRARAVAPFCSHP*SRRSSD
Trigger: ATCGCTTGATCTGCGGCTTCATGGATGACTGCAAAA...AGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTACCCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp GCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGGGAGGAGGAGAAATGCCGGTCTAAATaGAAGTCATCCGAGGACAGC +
Preference number: 4 (lower is better)
Translates to: ATTKAASCRRCKGSWEEEKCRSK*KSSEDS
Trigger: GCTGTCCTCGGATGACTTTCATTTAGACCGGCATTT...CTCCTCCTCCCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp CAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGGGACTTCCCTAGGTCTATaGGGCACTTGTCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: QQKLPPKQPAADAARAAGTSLGL*GTCPGG
Trigger: CCCTCCAGGACAAGTGCCTCATAGACCTAGGGAAGT...CCCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp TACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTTGGTGGTTGGTGCAGGATCCTCTaGACTTCAGCTCGACATTCT +
Preference number: 4 (lower is better)
Translates to: YTIQDGCTGGPGRWLLGGWCRIL*TSARHS
Trigger: AGAATGTCGAGCTGAAGTCCAGAGGATCCTGCACCA...ACCACCAAGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000164283.8
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp CCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGGATACTCGGTGCTCCTTaGCCTCCTGCAGAGTGTCGT +
Preference number: 4 (lower is better)
Translates to: PTKATTKAASCRRCKGSWILGAP*PPAECR
Trigger: ACGACACTCTGCAGGAGGCCAAGGAGCACCGAGTAT...CCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp GCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGGGAGGAGGAGGTGATGGCTGCACAGTaGTGTTTAATGTCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: ATTKAASCRRCKGSWEEEVMAAQ*CLMSKA
Trigger: TGCCTTGGACATTAAACACCACTGTGCAGCCATCAC...CTCCTCCTCCCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp AGGAGGAGGAGGAGGACACCGAGGACATGGCCAAGTCTGGATGGGAAGATGCAGTCATCGAGATGGTCCTaGAGGCACTCAAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RRRRRTPRTWPSLDGKMQSSRWS*RHSSSC
Trigger: GCAGGAGCTTGAGTGCCTTCAGGACCATCTCGATGA...CTGCATCTTCCCATCCAGACTTGGCCATGTCCTCGGTGTCCTCCTCCTCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp TACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTTGGTGGTAATCTGTGTTCTGGGTaGTCTGGCGCTTGGTTATCA +
Preference number: 4 (lower is better)
Translates to: YTIQDGCTGGPGRWLLGGNLCSG*SGAWLS
Trigger: TGATAACCAAGCGCCAGATCACCCAGAACACAGATT...ACCACCAAGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp CGCCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTATTGGCAATCTCATCTaGGCAGTGCAGCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RQQKLPPKQPAADAARAAIGNLI*AVQLEL
Trigger: CAGCTCCAGCTGCACTGCTCAGATGAGATTGCCAAT...AGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp GATGGCTGGGGATCCTGCTCCTGTAAAGCTCAGACTATGGAAGGTTGTCAGATCCTGCCGCCTCCACCTTaGCCTGGGAAGGGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: DGWGSCSCKAQTMEGCQILPPPP*PGKGPK
Trigger: CTTTGGGCCCTTCCCAGGGCAAGGTGGAGGCGGCAG...GATCTGACAACCTTCCATAGTCTGAGCTTTACAGGAGCAGGATCCCCAGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp AGGAGGACACCGAGGACATGGCCAAGTCTGGATGGGAAGATGCAGTGGGCACCTCGTTGCGCACAGTGGTaGTCAGGCAGATCACTACGT +
Preference number: 4 (lower is better)
Translates to: RRTPRTWPSLDGKMQWAPRCAQW*SGRSLR
Trigger: ACGTAGTGATCTGCCTGAGCACCACTGTGCGCAACG...AGGTGCCCACTGCATCTTCCCATCCAGACTTGGCCATGTCCTCGGTGTCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp GGGGGTTCTGGAAGTCACACTGATGCACAAGAGTGGATGCTCTCTAGGAAGGCCGCCTCCACCTTGCCCTaGGAAGGGCCCAAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: GGSGSHTDAQEWMLSRKAASTLP*EGPKVG
Trigger: ACCAACTTTGGGCCCTTCCCAGGGCAAGGTGGAGGC...GGCCTTCCTAGAGAGCATCCACTCTTGTGCATCAGTGTGACTTCCAGAACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp GAGAGGGTACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTTCGTTCATGTCCTTCTaGTGCTTGTTCTGGATCAGA +
Preference number: 4 (lower is better)
Translates to: ERVHYTGRLYRRARAVAPSFMSF*CLFWIR
Trigger: TCTGATCCAGAACAAGCACCAGAAGGACATGAACGA...AGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTACCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp GTGAGAGGGTACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCAGCTTAAATACTTTCTaGTGGCAACGGGTACTCAGC +
Preference number: 4 (lower is better)
Translates to: VRGYTIQDGCTGGPGRWLSLNTF*WQRVLS
Trigger: GCTGAGTACCCGTTGCCACCAGAAAGTATTTAAGCT...GAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTACCCTCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp CCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGGTCTGAGGACAGGCGCTaGTCAGCATATCTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: PTKATTKAASCRRCKGSWSEDRR*SAYLSL
Trigger: CAAGCTGAGATATGCTGACCAGCGCCTGTCCTCAGA...CCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp GCCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGAGAGAAGCCATCTGCTaGAGCCACCTTGGCTGCATA +
Preference number: 4 (lower is better)
Translates to: ANKSYHQSSQLPTLQGQLREAIC*SHLGCI
Trigger: TATGCAGCCAAGGTGGCTCCAGCAGATGGCTTCTCT...CAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp CTTGGTGGTCAGGCCTGCGCCTCTACCTGTCCTTCAGCTCTCGTGTCACTCTCTGTGATGTTGCCTCGATaGTCCACCAAGCAGGAAACC +
Preference number: 4 (lower is better)
Translates to: LGGQACASTCPSALVSLSVMLPR*STKQET
Trigger: GGTTTCCTGCTTGGTGGATCATCGAGGCAACATCAC...AGAGAGTGACACGAGAGCTGAAGGACAGGTAGAGGCGCAGGCCTGACCACCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
CDS-3UTR TCA 90 bp TATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTTGGTGGTCAGGCTGGCTAATGAGTAACTaGCTTTATAATCCTGGGCAA +
Preference number: 4 (lower is better)
Translates to: YTGRLYRRARAVAPWWSGWLMSN*LYNPGQ
Trigger: TTGCCCAGGATTATAAAGTCAGTTACTCATTAGCCA...GCCTGACCACCAAGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp GCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGGGAGGAGGAGCCTTGCAGGCCATTTTaGACTTGTAAGAGAATCGAA +
Preference number: 4 (lower is better)
Translates to: ATTKAASCRRCKGSWEEEPCRPF*TCKRIE
Trigger: TTCGATTCTCTTACAAGTTCAAAATGGCCTGCAAGG...CTCCTCCTCCCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp TACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTTGGTGGTTTTCCCCAAGACGAATaGTGCCACATTTCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: YTIQDGCTGGPGRWLLGGFPQDE*CHISRG
Trigger: ACCTCTTGAAATGTGGCAGCATTCGTCTTGGGGAAA...ACCACCAAGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp CAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGGGTCTCCGTCTTCTCACTaGACCACTTCCCTAGGTCTA +
Preference number: 4 (lower is better)
Translates to: QQKLPPKQPAADAARAAGSPSSH*TTSLGL
Trigger: TAGACCTAGGGAAGTGGTGCAGTGAGAAGACGGAGA...CCCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp TACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTTGGTGGTTTCATGTCCTTCTGGTaGTTGTTCTGGATCAGACAC +
Preference number: 4 (lower is better)
Translates to: YTIQDGCTGGPGRWLLGGFMSFW*LFWIRH
Trigger: GTGTCTGATCCAGAACAAGCACCAGAAGGACATGAA...ACCACCAAGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp CCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGGTTCCAACCATGGGTATaGCAAAGGCGGGAAGCATCT +
Preference number: 4 (lower is better)
Translates to: PTKATTKAASCRRCKGSWFQPWV*QRREAS
Trigger: AGATGCTTCCCGCCTTTGCCATACCCATGGTTGGAA...CCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp AGGAGGACACCGAGGACATGGCCAAGTCTGGATGGGAAGATGCAGTGGGCACCTTGTCGTTGCGCACAGTaGTGCTCAGGCAGATCACTA +
Preference number: 4 (lower is better)
Translates to: RRTPRTWPSLDGKMQWAPCRCAQ*CSGRSL
Trigger: TAGTGATCTGCCTGAGCACCACTGTGCGCAACGACA...AGGTGCCCACTGCATCTTCCCATCCAGACTTGGCCATGTCCTCGGTGTCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp CAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGGGGCGCTTTTTGCACTCTaGCTGCAATCTCACTCGCTT +
Preference number: 4 (lower is better)
Translates to: QQKLPPKQPAADAARAAGALFAL*LQSHSL
Trigger: AAGCGAGTGAGATTGCAGCCAGAGTGCAAAAAGCGC...CCCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp AGGAGGAGGAGGAGGACACCGAGGACATGGCCAAGTCTGGATGGGAAGATGCAGCTGCTGGAGCCACCTTaGCTGCATAACTCCACATCT +
Preference number: 4 (lower is better)
Translates to: RRRRRTPRTWPSLDGKMQLLEPP*LHNSTS
Trigger: AGATGTGGAGTTATGCAGCCAAGGTGGCTCCAGCAG...CTGCATCTTCCCATCCAGACTTGGCCATGTCCTCGGTGTCCTCCTCCTCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
3UTR CAA 72 bp ATCTCCAGCTCTTCCACACGAAGCTGCTTGCGGCACTaGAGTGATACTCGGTGCTCCTTGGCCTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: ISSSSTRSCLRH*SDTRCSLASCR
Trigger: TCTGCAGGAGGCCAAGGAGCACCGAGTATCACTCAAGTGCCGCAAGCAGCTTCGTGTGGAAGAGCTGGAGAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR CAA 72 bp TCCTCTGTCATCTCCAGCTCTTCCACACGAAGCTGCTaGCGGCACTTGAGTGATACTCGGTGCTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SSVISSSSTRSC*RHLSDTRCSLA
Trigger: GGCCAAGGAGCACCGAGTATCACTCAAGTGCCGCAAGCAGCTTCGTGTGGAAGAGCTGGAGATGACAGAGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
CDS-3UTR TCA 90 bp TGGCTCCTTGGTGGTCAGGCCTGCGCCTCTACCTGTCCTTCAGCTCTCGTGTCAGACACTGATACTCAGTaGTGTTGCCTCGATGATCCA +
Preference number: 4 (lower is better)
Translates to: WLLGGQACASTCPSALVSDTDTQ*CCLDDP
Trigger: TGGATCATCGAGGCAACATCACTGAGTATCAGTGTC...TGACACGAGAGCTGAAGGACAGGTAGAGGCGCAGGCCTGACCACCAAGGAGCCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
CDS-3UTR TCA 90 bp CGCCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTAATCTGTGTTCTGGGTaGTCTGGCGCTTGGTTATCA +
Preference number: 4 (lower is better)
Translates to: RQQKLPPKQPAADAARAANLCSG*SGAWLS
Trigger: TGATAACCAAGCGCCAGATCACCCAGAACACAGATT...AGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp CCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGGAGTCTTCCATCAGCATaGGTCGGTAATCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: PTKATTKAASCRRCKGSWSLPSA*VGNPAS
Trigger: AGATGCTGGATTACCGACGCATGCTGATGGAAGACT...CCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp ACAGAGCCCACCCTACTAAGCCCAATGAGCTACAGAATAGACAGCACTGGGCCCTCCACTTGGCCTGTTTaGTCCTGGGCTGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: TEPTLLSPMSYRIDSTGPSTWPV*SWAAAS
Trigger: AGAAGCAGCAGCCCAGGAGCAAACAGGCCAAGTGGA...GGGCCCAGTGCTGTCTATTCTGTAGCTCATTGGGCTTAGTAGGGTGGGCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp AGAATTGTCTACAGGCAGGTAAACCTTCGCCAACAAAAGCTACCACCAAAGCAGGGCTCCCTCACGTCCTaGAGGCACTCGAGCACCGCC +
Preference number: 4 (lower is better)
Translates to: RIVYRQVNLRQQKLPPKQGSLTS*RHSSTA
Trigger: GGCGGTGCTCGAGTGCCTGCAGGACGTGAGGGAGCC...CTGCTTTGGTGGTAGCTTTTGTTGGCGAAGGTTTACCTGCCTGTAGACAATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp AGGCAGGTAAACCTTCGCCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACTCCCCAGAGTCGATCTaGTTGTCTGCCACATCGTGG +
Preference number: 4 (lower is better)
Translates to: RQVNLRQQKLPPKQPAADSPESI*LSATSW
Trigger: CCACGATGTGGCAGACAACCAGATCGACTCTGGGGA...GTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGGCGAAGGTTTACCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp TCGCCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCGTGTTCTGGGTGATCTaGCGCTTGGTTATCATCTGT +
Preference number: 4 (lower is better)
Translates to: SPTKATTKAASCRRCKGSVFWVI*RLVIIC
Trigger: ACAGATGATAACCAAGCGCCAGATCACCCAGAACAC...GCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp AGGCAGGTAAACCTTCGCCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACAGGCACTCTTCCACTTaGCCTGTTTGCTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RQVNLRQQKLPPKQPAADRHSST*PVCSWA
Trigger: AGCCCAGGAGCAAACAGGCCAAGTGGAAGAGTGCCT...GTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGGCGAAGGTTTACCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp GCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGGGAGGAGGAGAAGGGAAGTTCATTGTaGAGAGAGCTTTGTAGAACA +
Preference number: 4 (lower is better)
Translates to: ATTKAASCRRCKGSWEEEKGSSL*RELCRT
Trigger: TGTTCTACAAAGCTCTCTCCACAATGAACTTCCCTT...CTCCTCCTCCCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168741.8
3UTR CAA 72 bp CGCCTCTACCTGTCCTTCAGCTCTCGTGTCACTCTCTaGGTGATCCGTCCACACATCAGGCCAATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RLYLSFSSRVTL*VIRPHIRPIRK
Trigger: CTTCCTGATTGGCCTGATGTGTGGACGGATCACCAAGAGAGTGACACGAGAGCTGAAGGACAGGTAGAGGCG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
CDS-3UTR TCA 90 bp CCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGGTTGGTCAGGATGCCATaGCAGAACTTAGGAATGTCA +
Preference number: 4 (lower is better)
Translates to: PTKATTKAASCRRCKGSWLVRMP*QNLGMS
Trigger: TGACATTCCTAAGTTCTGTCATGGCATCCTGACCAA...CCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp AGGCAGGTAAACCTTCGCCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACTGCAGATGCTCCCGCTaGTCACAGACAGGATGTAGT +
Preference number: 4 (lower is better)
Translates to: RQVNLRQQKLPPKQPAADCRCSR*SQTGCS
Trigger: ACTACATCCTGTCTGTGATCAGCGGGAGCATCTGCA...GTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGGCGAAGGTTTACCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp AACCAGGACTGGAAATGGTGGCCAGAAGTTCTCTGGGAATGCAGAGAGTTAAGGGCACCGCCAGGTTGTTaGTCCAGGTGTGTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: NQDWKWWPEVLWECRELRAPPGC*SRCVWG
Trigger: GCCCCAAACACACCTGGAGCAACAACCTGGCGGTGC...CCTTAACTCTCTGCATTCCCAGAGAACTTCTGGCCACCATTTCCAGTCCTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp AGGAGGAGGAGGAGGACACCGAGGACATGGCCAAGTCTGGATGGGAAGATGCAGTGGAGCCACCTTGGCTaGATAACTCCACATCTCAAT +
Preference number: 4 (lower is better)
Translates to: RRRRRTPRTWPSLDGKMQWSHLG*ITPHLN
Trigger: ATTGAGATGTGGAGTTATGCAGCCAAGGTGGCTCCA...CTGCATCTTCCCATCCAGACTTGGCCATGTCCTCGGTGTCCTCCTCCTCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp GTACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTTGGTGGTCCACAACAAATGATTaGAGTCTGAAGAAATCTCGT +
Preference number: 4 (lower is better)
Translates to: VHYTGRLYRRARAVAPWWSTTND*SLKKSR
Trigger: ACGAGATTTCTTCAGACTGCAATCATTTGTTGTGGA...CCACCAAGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp AGGCACAAAGGAGCTTGTTGGTCAGGAAGTCTGCCTGTCAGTCAGGAAGTCTGCACATCCATGGCTCGCTaGTGCAGGATCCTCTGGACT +
Preference number: 4 (lower is better)
Translates to: RHKGACWSGSLPVSQEVCTSMAR*CRILWT
Trigger: AGTCCAGAGGATCCTGCACCAGCGAGCCATGGATGT...GCAGACTTCCTGACTGACAGGCAGACTTCCTGACCAACAAGCTCCTTTGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp AGGCACAAAGGAGCTTGTTGGTCAGGAAGTCTGCCTGTCAGTCAGGAAGTCTGCGTGATGTTGCCTCGATaGTCCACCAAGCAGGAAACC +
Preference number: 4 (lower is better)
Translates to: RHKGACWSGSLPVSQEVCVMLPR*STKQET
Trigger: GGTTTCCTGCTTGGTGGATCATCGAGGCAACATCAC...GCAGACTTCCTGACTGACAGGCAGACTTCCTGACCAACAAGCTCCTTTGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp CCCGGCTTTTTGAAATACCAAAGGGAAATGTACCTACCACCAGTGGTCCCCAAGCTCGACAGCTCAGGATaGTCTCGGGGCTCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: PGFLKYQREMYLPPVVPKLDSSG*SRGSER
Trigger: TCTCTCTGAGCCCCGAGATCATCCTGAGCTGTCGAG...CTTGGGGACCACTGGTGGTAGGTACATTTCCCTTTGGTATTTCAAAAAGCCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp ACAGTCAAGTCCAGGGACCGGGTTAAAAGAAATGTCTTGCTCCTGGAGTCCCTTCGGACTCTAACTCGGTaGGGTTGCCCACGATGTCTC +
Preference number: 4 (lower is better)
Translates to: TVKSRDRVKRNVLLLESLRTLTR*GCPRCL
Trigger: GAGACATCGTGGGCAACCTCACCGAGTTAGAGTCCG...AAGGGACTCCAGGAGCAAGACATTTCTTTTAACCCGGTCCCTGGACTTGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp CAAGTCTGGATGGGAAGATGCAGTGGGCACCTGATGCTGCTCTACTGTGGGTGTTCTCAATCCGGTCATTaGGGCGCTTTTTGCACTCTG +
Preference number: 4 (lower is better)
Translates to: QVWMGRCSGHLMLLYCGCSQSGH*GAFCTL
Trigger: CAGAGTGCAAAAAGCGCCTCAATGACCGGATTGAGA...ACACCCACAGTAGAGCAGCATCAGGTGCCCACTGCATCTTCCCATCCAGACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp TGCAAGGGCAGCTGGGAGGAGGAGGAGGAGGAGGACACCGAGGACATGGCCAAGATGTTTAACACTTCCTaGAAAGGGAAGTTCATTGTG +
Preference number: 4 (lower is better)
Translates to: CKGSWEEEEEEDTEDMAKMFNTS*KGKFIV
Trigger: CACAATGAACTTCCCTTTTCAGGAAGTGTTAAACAT...CTTGGCCATGTCCTCGGTGTCCTCCTCCTCCTCCTCCTCCCAGCTGCCCTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168741.8
CDS-3UTR GCA 90 bp GCTTCTATTTGTATATCCTCGGACTCTAACTCGGTGAGGTTGCCCACGATGTCTGCCGCGAAAAGCGACTaGTGCTGTTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ASICISSDSNSVRLPTMSAAKSD*CCCCCC
Trigger: GCAGCAGCAGCAACAGCAGCAGTCGCTTTTCGCGGC...AGACATCGTGGGCAACCTCACCGAGTTAGAGTCCGAGGATATACAAATAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
CDS-3UTR GCA 90 bp AGAATTGTCTACAGGCAGGTAAACCTTCGCCAACAAAAGCTACCACCAAAGCAGACCTGCCGCCCTCTGTaGACTGCTGACTCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: RIVYRQVNLRQQKLPPKQTCRPL*TADSRH
Trigger: GTGCCTGGAGTCAGCAGTGCACAGAGGGCGGCAGGT...CTGCTTTGGTGGTAGCTTTTGTTGGCGAAGGTTTACCTGCCTGTAGACAATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp AGGCAGGTAAACCTTCGCCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACAATGTCCAAGGCACATaGTGTGTGAAGAACGGGGTC +
Preference number: 4 (lower is better)
Translates to: RQVNLRQQKLPPKQPAADNVQGT*CVKNGV
Trigger: GACCCCGTTCTTCACACAGCATGTGCCTTGGACATT...GTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGGCGAAGGTTTACCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp ATTGTCTACAGGCAGGTAAACCTTCGCCAACAAAAGCTACCACCAAAGCAGCCAGCCTCCACCTTGCCCTaGGAAGGGCCCAAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: IVYRQVNLRQQKLPPKQPASTLP*EGPKVG
Trigger: ACCAACTTTGGGCCCTTCCCAGGGCAAGGTGGAGGC...TGGCTGCTTTGGTGGTAGCTTTTGTTGGCGAAGGTTTACCTGCCTGTAGACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp AGGAGGAGGAGGAGGACACCGAGGACATGGCCAAGTCTGGATGGGAAGATGCAGTTAAATACTTTCTGGTaGCAACGGGTACTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RRRRRTPRTWPSLDGKMQLNTFW*QRVLSC
Trigger: GCAGCTGAGTACCCGTTGCCACCAGAAAGTATTTAA...CTGCATCTTCCCATCCAGACTTGGCCATGTCCTCGGTGTCCTCCTCCTCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp AGGAGGACACCGAGGACATGGCCAAGTCTGGATGGGAAGATGCAGTGGGCACCTAGGCATGAGATAACTTaGCCTTCTAGCTCTGAATCG +
Preference number: 4 (lower is better)
Translates to: RRTPRTWPSLDGKMQWAPRHEIT*PSSSES
Trigger: CGATTCAGAGCTAGAAGGCCAAGTTATCTCATGCCT...AGGTGCCCACTGCATCTTCCCATCCAGACTTGGCCATGTCCTCGGTGTCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp AATACCAAAGGGAAATGTACCTACCACCAGTGGTCCCCAAGACACTGGCATGAGTGTACCAGCTGGAAGTaGGTGACGCCAATGGCACAC +
Preference number: 4 (lower is better)
Translates to: NTKGKCTYHQWSPRHWHECTSWK*VTPMAH
Trigger: GTGTGCCATTGGCGTCACTCACTTCCAGCTGGTACA...CTCATGCCAGTGTCTTGGGGACCACTGGTGGTAGGTACATTTCCCTTTGGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp ACCGGGTTAAAAGAAATGTCTTGCTCCTGGAGTCCCTTCACTAGAAGCAGCCCCATTGGCAATCTCATCTaGGCAGTGCAGCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: TGLKEMSCSWSPFTRSSPIGNLI*AVQLEL
Trigger: CAGCTCCAGCTGCACTGCTCAGATGAGATTGCCAAT...GGGGCTGCTTCTAGTGAAGGGACTCCAGGAGCAAGACATTTCTTTTAACCCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp AATCTGCTGCAGGCAGTGTGGATTCCTGTCAGTGCAGAAGCAGCAGTGCTGAGATCAAAGCTCGATCAATaGGGTAGTCTGCACCAGGGT +
Preference number: 4 (lower is better)
Translates to: NLLQAVWIPVSAEAAVLRSKLDQ*GSLHQG
Trigger: ACCCTGGTGCAGACTACCGCATTGATCGAGCTTTGA...TCTCAGCACTGCTGCTTCTGCACTGACAGGAATCCACACTGCCTGCAGCAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp GTTGCAGGTCAGGTGAGTCGGTCTGGAAGTACCAGCAGTTCTGTAGGTATGACATTGAGTGATACTCGGTaGTCCTTGGCCTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: VAGQVSRSGSTSSSVGMTLSDTR*SLASCR
Trigger: TCTGCAGGAGGCCAAGGAGCACCGAGTATCACTCAA...TGTCATACCTACAGAACTGCTGGTACTTCCAGACCGACTCACCTGACCTGCAAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp CGCCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTCATAGTTTTAGAATCTaGTTCTGGACAGAACCGCTT +
Preference number: 4 (lower is better)
Translates to: RQQKLPPKQPAADAARAAHSFRI*FWTEPL
Trigger: AAGCGGTTCTGTCCAGAAGCAGATTCTAAAACTATG...AGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp CCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGGGTCCACAAAGATGTCTaGTTTGCTTTCCTTCAACAT +
Preference number: 4 (lower is better)
Translates to: PTKATTKAASCRRCKGSWVHKDV*FAFLQH
Trigger: ATGTTGAAGGAAAGCAAAGCAGACATCTTTGTGGAC...CCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp ATTGTCTACAGGCAGGTAAACCTTCGCCAACAAAAGCTACCACCAAAGCAGCCATGCTCCAGGTGTGTTTaGGGCACACACGGGTCACGT +
Preference number: 4 (lower is better)
Translates to: IVYRQVNLRQQKLPPKQPCSRCV*GTHGSR
Trigger: ACGTGACCCGTGTGTGCCCCAAACACACCTGGAGCA...TGGCTGCTTTGGTGGTAGCTTTTGTTGGCGAAGGTTTACCTGCCTGTAGACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp TGGCTCCTTGGTGGTCAGGCCTGCGCCTCTACCTGTCCTTCAGCTCTCGTGTCAGTAACCTTTTCCAACTaGTTCTTCCGCACATTCTTT +
Preference number: 4 (lower is better)
Translates to: WLLGGQACASTCPSALVSVTFSN*FFRTFF
Trigger: AAAGAATGTGCGGAAGAACCAGTTGGAAAAGGTTAC...TGACACGAGAGCTGAAGGACAGGTAGAGGCGCAGGCCTGACCACCAAGGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
CDS-3UTR CCA 90 bp GGCACATGCTGTGTGAAGAACGGGGTCCACAAAGATGTCTGCTTTGCTTTCCTTACATCCATGGCTCGCTaGTGCAGGATCCTCTGGACT +
Preference number: 4 (lower is better)
Translates to: GTCCVKNGVHKDVCFAFLTSMAR*CRILWT
Trigger: AGTCCAGAGGATCCTGCACCAGCGAGCCATGGATGT...AAGGAAAGCAAAGCAGACATCTTTGTGGACCCCGTTCTTCACACAGCATGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
CDS-3UTR CCA 90 bp TCCCTTCATTTAGAGGCACAAAGGAGCTTGTTGGTCAGGAAGTCTGCCTGTCAGTCCCCAGAGTCGATCTaGTTGTCTGCCACATCGTGG +
Preference number: 4 (lower is better)
Translates to: SLHLEAQRSLLVRKSACQSPESI*LSATSW
Trigger: CCACGATGTGGCAGACAACCAGATCGACTCTGGGGA...CTGACAGGCAGACTTCCTGACCAACAAGCTCCTTTGTGCCTCTAAATGAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp GGGGGTTCTGGAAGTCACACTGATGCACAAGAGTGGATGCTCTCTAGGAAGGCCTTCTGGTGCTTGTTCTaGATCAGACACTCCATCAGG +
Preference number: 4 (lower is better)
Translates to: GGSGSHTDAQEWMLSRKAFWCLF*IRHSIR
Trigger: CCTGATGGAGTGTCTGATCCAGAACAAGCACCAGAA...GGCCTTCCTAGAGAGCATCCACTCTTGTGCATCAGTGTGACTTCCAGAACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp AATACCAAAGGGAAATGTACCTACCACCAGTGGTCCCCAAGACACTGGCATGAGATACTCGGTGCTCCTTaGCCTCCTGCAGAGTGTCGT +
Preference number: 4 (lower is better)
Translates to: NTKGKCTYHQWSPRHWHEILGAP*PPAECR
Trigger: ACGACACTCTGCAGGAGGCCAAGGAGCACCGAGTAT...CTCATGCCAGTGTCTTGGGGACCACTGGTGGTAGGTACATTTCCCTTTGGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp AGGCAGGTAAACCTTCGCCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGGCTTCATACAGATCTaGTTCCAAACGGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: RQVNLRQQKLPPKQPAADGFIQI*FQTDVL
Trigger: GAGGACATCCGTTTGGAACCAGATCTGTATGAAGCC...GTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGGCGAAGGTTTACCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp ACCGGGTTAAAAGAAATGTCTTGCTCCTGGAGTCCCTTCACTAGAAGCAGCCCCTCTGAGGACAGGCGCTaGTCAGCATATCTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: TGLKEMSCSWSPFTRSSPSEDRR*SAYLSL
Trigger: CAAGCTGAGATATGCTGACCAGCGCCTGTCCTCAGA...GGGGCTGCTTCTAGTGAAGGGACTCCAGGAGCAAGACATTTCTTTTAACCCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp AATACCAAAGGGAAATGTACCTACCACCAGTGGTCCCCAAGACACTGGCATGAGAGGCACTCTTCCACTTaGCCTGTTTGCTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: NTKGKCTYHQWSPRHWHERHSST*PVCSWA
Trigger: AGCCCAGGAGCAAACAGGCCAAGTGGAAGAGTGCCT...CTCATGCCAGTGTCTTGGGGACCACTGGTGGTAGGTACATTTCCCTTTGGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp ACCGGGTTAAAAGAAATGTCTTGCTCCTGGAGTCCCTTCACTAGAAGCAGCCCCAATGTCCAAGGCACATaGTGTGTGAAGAACGGGGTC +
Preference number: 4 (lower is better)
Translates to: TGLKEMSCSWSPFTRSSPNVQGT*CVKNGV
Trigger: GACCCCGTTCTTCACACAGCATGTGCCTTGGACATT...GGGGCTGCTTCTAGTGAAGGGACTCCAGGAGCAAGACATTTCTTTTAACCCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp GGCACATGCTGTGTGAAGAACGGGGTCCACAAAGATGTCTGCTTTGCTTTCCTTATGAGGCACTTGTCCTaGAGGGCAGGATCCAGCTTA +
Preference number: 4 (lower is better)
Translates to: GTCCVKNGVHKDVCFAFLMRHLS*RAGSSL
Trigger: TAAGCTGGATCCTGCCCTCCAGGACAAGTGCCTCAT...AAGGAAAGCAAAGCAGACATCTTTGTGGACCCCGTTCTTCACACAGCATGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
CDS-3UTR CCA 90 bp TCACCAAAATGTAACACTGAGCCAGTGCCTACTGGAGTGGGTACACGCAGCAAATGTCGTTGCGCACAGTaGTGCTCAGGCAGATCACTA +
Preference number: 4 (lower is better)
Translates to: SPKCNTEPVPTGVGTRSKCRCAQ*CSGRSL
Trigger: TAGTGATCTGCCTGAGCACCACTGTGCGCAACGACA...TTTGCTGCGTGTACCCACTCCAGTAGGCACTGGCTCAGTGTTACATTTTGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp ACAGTCAAGTCCAGGGACCGGGTTAAAAGAAATGTCTTGCTCCTGGAGTCCCTTCTGCTGGAGCCACCTTaGCTGCATAACTCCACATCT +
Preference number: 4 (lower is better)
Translates to: TVKSRDRVKRNVLLLESLLLEPP*LHNSTS
Trigger: AGATGTGGAGTTATGCAGCCAAGGTGGCTCCAGCAG...AAGGGACTCCAGGAGCAAGACATTTCTTTTAACCCGGTCCCTGGACTTGACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp AACCAGGACTGGAAATGGTGGCCAGAAGTTCTCTGGGAATGCAGAGAGTTAAGGTCTCCGTCTTCTCACTaGACCACTTCCCTAGGTCTA +
Preference number: 4 (lower is better)
Translates to: NQDWKWWPEVLWECRELRSPSSH*TTSLGL
Trigger: TAGACCTAGGGAAGTGGTGCAGTGAGAAGACGGAGA...CCTTAACTCTCTGCATTCCCAGAGAACTTCTGGCCACCATTTCCAGTCCTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp AAGTTTAGTTTGTCTGGTTCTTGGCTCATTGACAGATTTCTGACCTGGTCCACACCTGCAGAGTGTCGTTaGGCACAGTGGTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: KFSLSGSWLIDRFLTWSTPAECR*AQWCSG
Trigger: GCCTGAGCACCACTGTGCGCAACGACACTCTGCAGG...TGTGGACCAGGTCAGAAATCTGTCAATGAGCCAAGAACCAGACAAACTAAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp CAAGTCTGGATGGGAAGATGCAGTGGGCACCTGATGCTGCTCTACTGTGGGTGTATCATCTCCGTCTCCTaGAGCTTAAATACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: QVWMGRCSGHLMLLYCGCIISVS*SLNTFW
Trigger: CCAGAAAGTATTTAAGCTGCAGGAGACGGAGATGAT...ACACCCACAGTAGAGCAGCATCAGGTGCCCACTGCATCTTCCCATCCAGACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp GTTGCAGGTCAGGTGAGTCGGTCTGGAAGTACCAGCAGTTCTGTAGGTATGACATGGAGCCACCTTGGCTaGATAACTCCACATCTCAAT +
Preference number: 4 (lower is better)
Translates to: VAGQVSRSGSTSSSVGMTWSHLG*ITPHLN
Trigger: ATTGAGATGTGGAGTTATGCAGCCAAGGTGGCTCCA...TGTCATACCTACAGAACTGCTGGTACTTCCAGACCGACTCACCTGACCTGCAAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp CCCGGCTTTTTGAAATACCAAAGGGAAATGTACCTACCACCAGTGGTCCCCAAGTGGTGCAGGATCCTCTaGACTTCAGCTCGACATTCT +
Preference number: 4 (lower is better)
Translates to: PGFLKYQREMYLPPVVPKWCRIL*TSARHS
Trigger: AGAATGTCGAGCTGAAGTCCAGAGGATCCTGCACCA...CTTGGGGACCACTGGTGGTAGGTACATTTCCCTTTGGTATTTCAAAAAGCCGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp AATCTGCTGCAGGCAGTGTGGATTCCTGTCAGTGCAGAAGCAGCAGTGCTGAGATCGTTCATGTCCTTCTaGTGCTTGTTCTGGATCAGA +
Preference number: 4 (lower is better)
Translates to: NLLQAVWIPVSAEAAVLRSFMSF*CLFWIR
Trigger: TCTGATCCAGAACAAGCACCAGAAGGACATGAACGA...TCTCAGCACTGCTGCTTCTGCACTGACAGGAATCCACACTGCCTGCAGCAGATT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp AGGAGGACACCGAGGACATGGCCAAGTCTGGATGGGAAGATGCAGTGGGCACCTTTTAGAATCTGCTTCTaGACAGAACCGCTTAATCAT +
Preference number: 4 (lower is better)
Translates to: RRTPRTWPSLDGKMQWAPFRICF*TEPLNH
Trigger: ATGATTAAGCGGTTCTGTCCAGAAGCAGATTCTAAA...AGGTGCCCACTGCATCTTCCCATCCAGACTTGGCCATGTCCTCGGTGTCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp TCACCAAAATGTAACACTGAGCCAGTGCCTACTGGAGTGGGTACACGCAGCAAAGCGCTTTTTGCACTCTaGCTGCAATCTCACTCGCTT +
Preference number: 4 (lower is better)
Translates to: SPKCNTEPVPTGVGTRSKALFAL*LQSHSL
Trigger: AAGCGAGTGAGATTGCAGCCAGAGTGCAAAAAGCGC...TTTGCTGCGTGTACCCACTCCAGTAGGCACTGGCTCAGTGTTACATTTTGGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp CAAGTCTGGATGGGAAGATGCAGTGGGCACCTGATGCTGCTCTACTGTGGGTGTATGTCATCACTTGCATaGCAAGATCAGAGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: QVWMGRCSGHLMLLYCGCMSSLA*QDQRSH
Trigger: ATGGCTTCTCTGATCTTGCCATGCAAGTGATGACAT...ACACCCACAGTAGAGCAGCATCAGGTGCCCACTGCATCTTCCCATCCAGACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
3UTR CAA 72 bp TCCACATCCCTTCATTTAGAGGCACAAAGGAGCTTGTaGGTCAGGAAGTCTGCCTGTCAGTCAGGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: STSLHLEAQRSL*VRKSACQSGSL
Trigger: CAGACTTCCTGACTGACAGGCAGACTTCCTGACCAACAAGCTCCTTTGTGCCTCTAAATGAAGGGATGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp AACCAGGACTGGAAATGGTGGCCAGAAGTTCTCTGGGAATGCAGAGAGTTAAGGGACACTGATACTCAGTaGTGTTGCCTCGATGATCCA +
Preference number: 4 (lower is better)
Translates to: NQDWKWWPEVLWECRELRDTDTQ*CCLDDP
Trigger: TGGATCATCGAGGCAACATCACTGAGTATCAGTGTC...CCTTAACTCTCTGCATTCCCAGAGAACTTCTGGCCACCATTTCCAGTCCTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp GACATGTCAATGATCAGGCACGGGATATGCATCGCTCCTCCAAGTCCTGCTGACCAGAGTTCTGAGACTTaGATCTTCGGCTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: DMSMIRHGICIAPPSPADQSSET*IFGSFS
Trigger: AGAAAAAGAGCCGAAGATTCAAGTCTCAGAACTCTG...GTCAGCAGGACTTGGAGGAGCGATGCATATCCCGTGCCTGATCATTGACATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp GATGGCTGGGGATCCTGCTCCTGTAAAGCTCAGACTATGGAAGGTTGTCAGATCTTGGTCAGGATGCCATaGCAGAACTTAGGAATGTCA +
Preference number: 4 (lower is better)
Translates to: DGWGSCSCKAQTMEGCQILVRMP*QNLGMS
Trigger: TGACATTCCTAAGTTCTGTCATGGCATCCTGACCAA...GATCTGACAACCTTCCATAGTCTGAGCTTTACAGGAGCAGGATCCCCAGCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp GTTGCAGGTCAGGTGAGTCGGTCTGGAAGTACCAGCAGTTCTGTAGGTATGACACAAATGATTGCAGTCTaGAGAAATCTCGTTCTCGGG +
Preference number: 4 (lower is better)
Translates to: VAGQVSRSGSTSSSVGMTQMIAV*RNLVLG
Trigger: CCCGAGAACGAGATTTCTTCAGACTGCAATCATTTG...TGTCATACCTACAGAACTGCTGGTACTTCCAGACCGACTCACCTGACCTGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp CCTGGGCTGCTGCTTCTTCAGCACATAGATTGGCAATCTCATCTGAGCAGTGCATTTCCCCAAGACGAATaGTGCCACATTTCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: PGLLLLQHIDWQSHLSSAFPQDE*CHISRG
Trigger: ACCTCTTGAAATGTGGCAGCATTCGTCTTGGGGAAA...TGCACTGCTCAGATGAGATTGCCAATCTATGTGCTGAAGAAGCAGCAGCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
CDS-3UTR GCA 90 bp ACCGGGTTAAAAGAAATGTCTTGCTCCTGGAGTCCCTTCACTAGAAGCAGCCCCCGGATCGTATGTGTTTaGAGGCTGTCTGTATTACAG +
Preference number: 4 (lower is better)
Translates to: TGLKEMSCSWSPFTRSSPRIVCV*RLSVLQ
Trigger: CTGTAATACAGACAGCCTGCAAACACATACGATCCG...GGGGCTGCTTCTAGTGAAGGGACTCCAGGAGCAAGACATTTCTTTTAACCCGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp AATCTGCTGCAGGCAGTGTGGATTCCTGTCAGTGCAGAAGCAGCAGTGCTGAGAATCATCTCCGTCTCCTaGAGCTTAAATACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: NLLQAVWIPVSAEAAVLRIISVS*SLNTFW
Trigger: CCAGAAAGTATTTAAGCTGCAGGAGACGGAGATGAT...TCTCAGCACTGCTGCTTCTGCACTGACAGGAATCCACACTGCCTGCAGCAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp ACAGAGCCCACCCTACTAAGCCCAATGAGCTACAGAATAGACAGCACTGGGCCCCATAGTTTTAGAATCTaGTTCTGGACAGAACCGCTT +
Preference number: 4 (lower is better)
Translates to: TEPTLLSPMSYRIDSTGPHSFRI*FWTEPL
Trigger: AAGCGGTTCTGTCCAGAAGCAGATTCTAAAACTATG...GGGCCCAGTGCTGTCTATTCTGTAGCTCATTGGGCTTAGTAGGGTGGGCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp CAAGTCTGGATGGGAAGATGCAGTGGGCACCTGATGCTGCTCTACTGTGGGTGTGTCCACAAAGATGTCTaGTTTGCTTTCCTTCAACAT +
Preference number: 4 (lower is better)
Translates to: QVWMGRCSGHLMLLYCGCVHKDV*FAFLQH
Trigger: ATGTTGAAGGAAAGCAAAGCAGACATCTTTGTGGAC...ACACCCACAGTAGAGCAGCATCAGGTGCCCACTGCATCTTCCCATCCAGACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp AGAATTGTCTACAGGCAGGTAAACCTTCGCCAACAAAAGCTACCACCAAAGCAGGCCAGGGGTGATGGCTaGACAGTGGTGTTTAATGTC +
Preference number: 4 (lower is better)
Translates to: RIVYRQVNLRQQKLPPKQARGDG*TVVFNV
Trigger: GACATTAAACACCACTGTGCAGCCATCACCCCTGGC...CTGCTTTGGTGGTAGCTTTTGTTGGCGAAGGTTTACCTGCCTGTAGACAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp CTAAATCTTCAGAAGCCATCTCTTCTGGCCTGTACTATTGTTCAGCAAACTAAGGAAGGTAGGAGAGCCTaGCTTCCCGGGACCGAGGAA +
Preference number: 4 (lower is better)
Translates to: LNLQKPSLLACTIVQQTKEGRRA*LPGTEE
Trigger: TTCCTCGGTCCCGGGAAGCCAGGCTCTCCTACCTTC...CTTAGTTTGCTGAACAATAGTACAGGCCAGAAGAGATGGCTTCTGAAGATTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp AGGCACAAAGGAGCTTGTTGGTCAGGAAGTCTGCCTGTCAGTCAGGAAGTCTGCTGTAATCCAGAACAATaGTGTTCAATCTCCCCTCGA +
Preference number: 4 (lower is better)
Translates to: RHKGACWSGSLPVSQEVCCNPEQ*CSISPR
Trigger: TCGAGGGGAGATTGAACACCATTGTTCTGGATTACA...GCAGACTTCCTGACTGACAGGCAGACTTCCTGACCAACAAGCTCCTTTGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp ACTGCCCGGCCAGGTTGGGGTTCTTGGCAAGTTCATGTCTATCTAATTTATACCGTCTCATTCCAACCATaGGTATGGCAAAGGCGGGAA +
Preference number: 4 (lower is better)
Translates to: TARPGWGSWQVHVYLIYTVSFQP*VWQRRE
Trigger: TTCCCGCCTTTGCCATACCCATGGTTGGAATGAGAC...GGTATAAATTAGATAGACATGAACTTGCCAAGAACCCCAACCTGGCCGGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp GTTGCAGGTCAGGTGAGTCGGTCTGGAAGTACCAGCAGTTCTGTAGGTATGACAAGCTTAAATACTTTCTaGTGGCAACGGGTACTCAGC +
Preference number: 4 (lower is better)
Translates to: VAGQVSRSGSTSSSVGMTSLNTF*WQRVLS
Trigger: GCTGAGTACCCGTTGCCACCAGAAAGTATTTAAGCT...TGTCATACCTACAGAACTGCTGGTACTTCCAGACCGACTCACCTGACCTGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp AACCAGGACTGGAAATGGTGGCCAGAAGTTCTCTGGGAATGCAGAGAGTTAAGGGTGTTCTGGGTGATCTaGCGCTTGGTTATCATCTGT +
Preference number: 4 (lower is better)
Translates to: NQDWKWWPEVLWECRELRVFWVI*RLVIIC
Trigger: ACAGATGATAACCAAGCGCCAGATCACCCAGAACAC...CCTTAACTCTCTGCATTCCCAGAGAACTTCTGGCCACCATTTCCAGTCCTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp AAAGAAATGTCTTGCTCCTGGAGTCCCTTCACTAGAAGCAGCCCCATCAGAAAAAGAGAAGCCATCTGCTaGAGCCACCTTGGCTGCATA +
Preference number: 4 (lower is better)
Translates to: KEMSCSWSPFTRSSPIRKREAIC*SHLGCI
Trigger: TATGCAGCCAAGGTGGCTCCAGCAGATGGCTTCTCT...TTTTCTGATGGGGCTGCTTCTAGTGAAGGGACTCCAGGAGCAAGACATTTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp AGGCACAAAGGAGCTTGTTGGTCAGGAAGTCTGCCTGTCAGTCAGGAAGTCTGCATGTCATCACTTGCATaGCAAGATCAGAGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: RHKGACWSGSLPVSQEVCMSSLA*QDQRSH
Trigger: ATGGCTTCTCTGATCTTGCCATGCAAGTGATGACAT...GCAGACTTCCTGACTGACAGGCAGACTTCCTGACCAACAAGCTCCTTTGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp AGAATTGTCTACAGGCAGGTAAACCTTCGCCAACAAAAGCTACCACCAAAGCAGTACCACCTCACCTTGTaGATGTGCATCCTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: RIVYRQVNLRQQKLPPKQYHLTL*MCILFP
Trigger: GGGGAAAAGGATGCACATTCACAAGGTGAGGTGGTA...CTGCTTTGGTGGTAGCTTTTGTTGGCGAAGGTTTACCTGCCTGTAGACAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp TTAGGCAATGAAAGCAGGACAGTGAAGGGTGAGGCTCAGACTTTGGCTCGCACTCCTTGCAGGCCATTTTaGACTTGTAAGAGAATCGAA +
Preference number: 4 (lower is better)
Translates to: LGNESRTVKGEAQTLARTPCRPF*TCKRIE
Trigger: TTCGATTCTCTTACAAGTTCAAAATGGCCTGCAAGG...AGTGCGAGCCAAAGTCTGAGCCTCACCCTTCACTGTCCTGCTTTCATTGCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR TCA 90 bp ATCCGGTCATTGAGGCGCTTTTTGCACTCTGGCTGCAATCTCACTCGCTTATCTCAAATGATTGCAGTCTaGAGAAATCTCGTTCTCGGG +
Preference number: 4 (lower is better)
Translates to: IRSLRRFLHSGCNLTRLSQMIAV*RNLVLG
Trigger: CCCGAGAACGAGATTTCTTCAGACTGCAATCATTTG...AGATAAGCGAGTGAGATTGCAGCCAGAGTGCAAAAAGCGCCTCAATGACCGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
CDS-3UTR GCA 90 bp TCACCAAAATGTAACACTGAGCCAGTGCCTACTGGAGTGGGTACACGCAGCAAACGGCTCTTTTTCTTCTaGCTCTTTTACCAGGCCTTT +
Preference number: 4 (lower is better)
Translates to: SPKCNTEPVPTGVGTRSKRLFFF*LFYQAF
Trigger: AAAGGCCTGGTAAAAGAGGCAGAAGAAAAAGAGCCG...TTTGCTGCGTGTACCCACTCCAGTAGGCACTGGCTCAGTGTTACATTTTGGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp GTTGCAGGTCAGGTGAGTCGGTCTGGAAGTACCAGCAGTTCTGTAGGTATGACATTTTTGCACTCTGGCTaGAATCTCACTCGCTTATCT +
Preference number: 4 (lower is better)
Translates to: VAGQVSRSGSTSSSVGMTFLHSG*NLTRLS
Trigger: AGATAAGCGAGTGAGATTGCAGCCAGAGTGCAAAAA...TGTCATACCTACAGAACTGCTGGTACTTCCAGACCGACTCACCTGACCTGCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp AGAATTGTCTACAGGCAGGTAAACCTTCGCCAACAAAAGCTACCACCAAAGCAGTGGTGCAGGATCCTCTaGACTTCAGCTCGACATTCT +
Preference number: 4 (lower is better)
Translates to: RIVYRQVNLRQQKLPPKQWCRIL*TSARHS
Trigger: AGAATGTCGAGCTGAAGTCCAGAGGATCCTGCACCA...CTGCTTTGGTGGTAGCTTTTGTTGGCGAAGGTTTACCTGCCTGTAGACAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000164283.8
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp ATTGTCTACAGGCAGGTAAACCTTCGCCAACAAAAGCTACCACCAAAGCAGCCATTCTGGTGCTTGTTCTaGATCAGACACTCCATCAGG +
Preference number: 4 (lower is better)
Translates to: IVYRQVNLRQQKLPPKQPFWCLF*IRHSIR
Trigger: CCTGATGGAGTGTCTGATCCAGAACAAGCACCAGAA...TGGCTGCTTTGGTGGTAGCTTTTGTTGGCGAAGGTTTACCTGCCTGTAGACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp AATACCAAAGGGAAATGTACCTACCACCAGTGGTCCCCAAGACACTGGCATGAGTTAAATACTTTCTGGTaGCAACGGGTACTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: NTKGKCTYHQWSPRHWHELNTFW*QRVLSC
Trigger: GCAGCTGAGTACCCGTTGCCACCAGAAAGTATTTAA...CTCATGCCAGTGTCTTGGGGACCACTGGTGGTAGGTACATTTCCCTTTGGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp ATTGTCTACAGGCAGGTAAACCTTCGCCAACAAAAGCTACCACCAAAGCAGCCAATGATGATACGGATCTaGTCCTCACAGTCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: IVYRQVNLRQQKLPPKQPMMIRI*SSQSED
Trigger: GTCCTCAGACTGTGAGGACCAGATCCGTATCATCAT...TGGCTGCTTTGGTGGTAGCTTTTGTTGGCGAAGGTTTACCTGCCTGTAGACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp ACTGCCCGGCCAGGTTGGGGTTCTTGGCAAGTTCATGTCTATCTAATTTATACCATGATGATACGGATCTaGTCCTCACAGTCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: TARPGWGSWQVHVYLIYTMMIRI*SSQSED
Trigger: GTCCTCAGACTGTGAGGACCAGATCCGTATCATCAT...GGTATAAATTAGATAGACATGAACTTGCCAAGAACCCCAACCTGGCCGGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp TCCCTTCATTTAGAGGCACAAAGGAGCTTGTTGGTCAGGAAGTCTGCCTGTCAGTTTTTGCACTCTGGCTaGAATCTCACTCGCTTATCT +
Preference number: 4 (lower is better)
Translates to: SLHLEAQRSLLVRKSACQFLHSG*NLTRLS
Trigger: AGATAAGCGAGTGAGATTGCAGCCAGAGTGCAAAAA...CTGACAGGCAGACTTCCTGACCAACAAGCTCCTTTGTGCCTCTAAATGAAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp GTTGCAGGTCAGGTGAGTCGGTCTGGAAGTACCAGCAGTTCTGTAGGTATGACAGTAACCTTTTCCAACTaGTTCTTCCGCACATTCTTT +
Preference number: 4 (lower is better)
Translates to: VAGQVSRSGSTSSSVGMTVTFSN*FFRTFF
Trigger: AAAGAATGTGCGGAAGAACCAGTTGGAAAAGGTTAC...TGTCATACCTACAGAACTGCTGGTACTTCCAGACCGACTCACCTGACCTGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164283.8
ENSMUST00000169020.8
3UTR CAA 72 bp TCTATTTGTATATCCTCGGACTCTAACTCGGTGAGGTaGCCCACGATGTCTCTGCATTCCACAGCTAAGTCA +
Preference number: 4 (lower is better)
Translates to: SICISSDSNSVR*PTMSLHSTAKS
Trigger: TGACTTAGCTGTGGAATGCAGAGACATCGTGGGCAACCTCACCGAGTTAGAGTCCGAGGATATACAAATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
CDS-3UTR TCA 90 bp AATCCTCCATCTTTTAATGCAATCACTTTCCACATCCCTTCATTTAGAGGCACAACTTCCCTAGGTCTATaGGGCACTTGTCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: NPPSFNAITFHIPSFRGTTSLGL*GTCPGG
Trigger: CCCTCCAGGACAAGTGCCTCATAGACCTAGGGAAGT...TGTGCCTCTAAATGAAGGGATGTGGAAAGTGATTGCATTAAAAGATGGAGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp AGAATTGTCTACAGGCAGGTAAACCTTCGCCAACAAAAGCTACCACCAAAGCAGAGGCATGAGATAACTTaGCCTTCTAGCTCTGAATCG +
Preference number: 4 (lower is better)
Translates to: RIVYRQVNLRQQKLPPKQRHEIT*PSSSES
Trigger: CGATTCAGAGCTAGAAGGCCAAGTTATCTCATGCCT...CTGCTTTGGTGGTAGCTTTTGTTGGCGAAGGTTTACCTGCCTGTAGACAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
3UTR CAA 72 bp AATGAAAGCAGGACAGTGAAGGGTGAGGCTCAGACTTaGGCTCGCACTGTAGGTCTGTGTTTTGTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: NESRTVKGEAQT*ARTVGLCFVLF
Trigger: AAACAAAACAAAACACAGACCTACAGTGCGAGCCAAAGTCTGAGCCTCACCCTTCACTGTCCTGCTTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp AACCAGGACTGGAAATGGTGGCCAGAAGTTCTCTGGGAATGCAGAGAGTTAAGGTTCTCTGTGTATAAATaGTCCATCAGACATGAGAGA +
Preference number: 4 (lower is better)
Translates to: NQDWKWWPEVLWECRELRFSVYK*SIRHER
Trigger: TCTCTCATGTCTGATGGAGCATTTATACACAGAGAA...CCTTAACTCTCTGCATTCCCAGAGAACTTCTGGCCACCATTTCCAGTCCTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp AATCCTCCATCTTTTAATGCAATCACTTTCCACATCCCTTCATTTAGAGGCACAATGAGGCACTTGTCCTaGAGGGCAGGATCCAGCTTA +
Preference number: 4 (lower is better)
Translates to: NPPSFNAITFHIPSFRGTMRHLS*RAGSSL
Trigger: TAAGCTGGATCCTGCCCTCCAGGACAAGTGCCTCAT...TGTGCCTCTAAATGAAGGGATGTGGAAAGTGATTGCATTAAAAGATGGAGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp AAGTTTAGTTTGTCTGGTTCTTGGCTCATTGACAGATTTCTGACCTGGTCCACAGGCTTCATACAGATCTaGTTCCAAACGGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: KFSLSGSWLIDRFLTWSTGFIQI*FQTDVL
Trigger: GAGGACATCCGTTTGGAACCAGATCTGTATGAAGCC...TGTGGACCAGGTCAGAAATCTGTCAATGAGCCAAGAACCAGACAAACTAAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp AACCAGGACTGGAAATGGTGGCCAGAAGTTCTCTGGGAATGCAGAGAGTTAAGGTTTAGAATCTGCTTCTaGACAGAACCGCTTAATCAT +
Preference number: 4 (lower is better)
Translates to: NQDWKWWPEVLWECRELRFRICF*TEPLNH
Trigger: ATGATTAAGCGGTTCTGTCCAGAAGCAGATTCTAAA...CCTTAACTCTCTGCATTCCCAGAGAACTTCTGGCCACCATTTCCAGTCCTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
3UTR CAA 72 bp TTTAACACTTCCTTTTTACACAGCTCTGTCTTGATCTaGAGCAGGTTGACCTTCAGGCACTCTTCCACTTGG +
Preference number: 4 (lower is better)
Translates to: FNTSFLHSSVLI*SRLTFRHSSTW
Trigger: CCAAGTGGAAGAGTGCCTGAAGGTCAACCTGCTCAAGATCAAGACAGAGCTGTGTAAAAAGGAAGTGTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
CDS-3UTR TCA 90 bp AAGTTTAGTTTGTCTGGTTCTTGGCTCATTGACAGATTTCTGACCTGGTCCACATTTCTTGCAGAGTTCTaGGACTTGAATCTTCGGCTC +
Preference number: 4 (lower is better)
Translates to: KFSLSGSWLIDRFLTWSTFLAEF*DLNLRL
Trigger: GAGCCGAAGATTCAAGTCTCAGAACTCTGCAAGAAA...TGTGGACCAGGTCAGAAATCTGTCAATGAGCCAAGAACCAGACAAACTAAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR GCA 90 bp GCTTCTATTTGTATATCCTCGGACTCTAACTCGGTGAGGTTGCCCACGATGTCTTCCACAACAAATGATTaGAGTCTGAAGAAATCTCGT +
Preference number: 4 (lower is better)
Translates to: ASICISSDSNSVRLPTMSSTTND*SLKKSR
Trigger: ACGAGATTTCTTCAGACTGCAATCATTTGTTGTGGA...AGACATCGTGGGCAACCTCACCGAGTTAGAGTCCGAGGATATACAAATAGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR CAA 72 bp AACATGTTTAACACTTCCTTTTTACACAGCTCTGTCTaGATCTTGAGCAGGTTGACCTTCAGGCACTCTTCC +
Preference number: 4 (lower is better)
Translates to: NMFNTSFLHSSV*ILSRLTFRHSS
Trigger: GGAAGAGTGCCTGAAGGTCAACCTGCTCAAGATCAAGACAGAGCTGTGTAAAAAGGAAGTGTTAAACATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
3UTR CAA 72 bp TCACTAGAAGCAGCCCCATCAGAAAAGAAGTTTAGTTaGTCTGGTTCTTGGCTCATTGACAGATTTCTGACC +
Preference number: 4 (lower is better)
Translates to: SLEAAPSEKKFS*SGSWLIDRFLT
Trigger: GGTCAGAAATCTGTCAATGAGCCAAGAACCAGACAAACTAAACTTCTTTTCTGATGGGGCTGCTTCTAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CCA 90 bp AATCCTCCATCTTTTAATGCAATCACTTTCCACATCCCTTCATTTAGAGGCACAGTGATGGCTGCACAGTaGTGTTTAATGTCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: NPPSFNAITFHIPSFRGTVMAAQ*CLMSKA
Trigger: TGCCTTGGACATTAAACACCACTGTGCAGCCATCAC...TGTGCCTCTAAATGAAGGGATGTGGAAAGTGATTGCATTAAAAGATGGAGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS CCA 90 bp CTGAGGCGGCTGTTGGCCGGCCGGGCTGCCGCCTCCACCTTGCCCTaGGAAGGGCCCAAAGTTGGTCCCCGGACCCTGGCCCTGACCGTG +
Preference number: 5 (lower is better)
Translates to: LRRLLAGRAAASTLP*EGPKVGPRTLALTV
Trigger: CACGGTCAGGGCCAGGGTCCGGGGACCAACTTTGGGCCCTTCCCAGGGCAAGGTGGAGGCGGCAGCCCGGCCGGCCAACAGCCGCCTCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000003404.9
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS CCA 90 bp CGGCCGGGCTGCCGCCTCCACCTTGCCCTGGGAAGGGCCCAAAGTTaGTCCCCGGACCCTGGCCCTGACCGTGACCATTCTGGGCCCCTG +
Preference number: 5 (lower is better)
Translates to: RPGCRLHLALGRAQS*SPDPGPDRDHSGPL
Trigger: CAGGGGCCCAGAATGGTCACGGTCAGGGCCAGGGTCCGGGGACCAACTTTGGGCCCTTCCCAGGGCAAGGTGGAGGCGGCAGCCCGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000003404.9
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS GCA 90 bp GGTCCCCGGACCCTGGCCCTGACCGTGACCATTCTGGGCCCCTGCTaGCGCGAGCAGCAGCAGCGGCAACGCCGCCGACAAGCGGAACAT +
Preference number: 5 (lower is better)
Translates to: GPRTLALTVTILGPC*REQQQRQRRRQAEH
Trigger: ATGTTCCGCTTGTCGGCGGCGTTGCCGCTGCTGCTGCTCGCGGCAGCAGGGGCCCAGAATGGTCACGGTCAGGGCCAGGGTCCGGGGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000003404.9
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS GCA 90 bp GTTGGTCCCCGGACCCTGGCCCTGACCGTGACCATTCTGGGCCCCTaGTGCCGCGAGCAGCAGCAGCGGCAACGCCGCCGACAAGCGGAA +
Preference number: 5 (lower is better)
Translates to: VGPRTLALTVTILGP*CREQQQRQRRRQAE
Trigger: TTCCGCTTGTCGGCGGCGTTGCCGCTGCTGCTGCTCGCGGCAGCAGGGGCCCAGAATGGTCACGGTCAGGGCCAGGGTCCGGGGACCAAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000003404.9
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS GCA 90 bp GCTGCGATAACTGAGGCTGCTGAGGCGGCTGTTGGCCGGCCGGGCTaGCGCCTCCACCTTGCCCTGGGAAGGGCCCAAAGTTGGTCCCCG +
Preference number: 5 (lower is better)
Translates to: AAITEAAEAAVGRPG*RLHLALGRAQSWSP
Trigger: CGGGGACCAACTTTGGGCCCTTCCCAGGGCAAGGTGGAGGCGGCAGCCCGGCCGGCCAACAGCCGCCTCAGCAGCCTCAGTTATCGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000003404.9
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS GCA 90 bp CGGGCTCCCTCACGTCCTGCAGGCACTCGAGCACCGCCAGGTTGTTaGTCCAGGTGTGTTTGGGGCACACACGGGTCACGTCCTCCCGGC +
Preference number: 5 (lower is better)
Translates to: RAPSRPAGTRAPPGC*SRCVWGTHGSRPPG
Trigger: GCCGGGAGGACGTGACCCGTGTGTGCCCCAAACACACCTGGAGCAACAACCTGGCGGTGCTCGAGTGCCTGCAGGACGTGAGGGAGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS CCA 90 bp CCTGCAGGCACTCGAGCACCGCCAGGTTGTTGCTCCAGGTGTGTTTaGGGCACACACGGGTCACGTCCTCCCGGCAGGACTCTTCCTCCG +
Preference number: 5 (lower is better)
Translates to: PAGTRAPPGCCSRCV*GTHGSRPPGRTLPP
Trigger: CGGAGGAAGAGTCCTGCCGGGAGGACGTGACCCGTGTGTGCCCCAAACACACCTGGAGCAACAACCTGGCGGTGCTCGAGTGCCTGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000003404.9
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp CAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGGGGGGAAGGGCCCAAAGTaGGTCCCCGGACCCTGGCCC +
Preference number: 5 (lower is better)
Translates to: QQKLPPKQPAADAARAAGGKGPK*VPGPWP
Trigger: GGGCCAGGGTCCGGGGACCAACTTTGGGCCCTTCCC...CCCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS GCA 90 bp ACAACTCCCTCACGTCCTGCAGGCACTCGAGCACCGCCAGGTTGTTaGTCCAGGTGTGTTTGGGGCACACACGGGTCACGTCCTCCCGGC +
Preference number: 5 (lower is better)
Translates to: TTPSRPAGTRAPPGC*SRCVWGTHGSRPPG
Trigger: GCCGGGAGGACGTGACCCGTGTGTGCCCCAAACACACCTGGAGCAACAACCTGGCGGTGCTCGAGTGCCTGCAGGACGTGAGGGAGTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003404.9
CDS-3UTR CAA 90 bp GTACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTTGGTGGTCCTGCAGAGTGTCGTaGCGCACAGTGGTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: VHYTGRLYRRARAVAPWWSCRVS*RTVVLR
Trigger: CCTGAGCACCACTGTGCGCAACGACACTCTGCAGGA...CCACCAAGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp GTACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTTGGTGGTCGAGCACCGCCAGGTaGTTGCTCCAGGTGTGTTTG +
Preference number: 5 (lower is better)
Translates to: VHYTGRLYRRARAVAPWWSSTAR*LLQVCL
Trigger: CAAACACACCTGGAGCAACAACCTGGCGGTGCTCGA...CCACCAAGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp GCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGGGAGGAGGAGTTCCACTTGGCCTGTTaGCTCCTGGGCTGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: ATTKAASCRRCKGSWEEEFHLAC*LLGCCF
Trigger: GAAGCAGCAGCCCAGGAGCAAACAGGCCAAGTGGAA...CTCCTCCTCCCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp GCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGGGAGGAGGAGATCCAGCATCTCACCTaGGCACTCACTGCTCACCTG +
Preference number: 5 (lower is better)
Translates to: ATTKAASCRRCKGSWEEEIQHLT*ALTAHL
Trigger: CAGGTGAGCAGTGAGTGCCAAGGTGAGATGCTGGAT...CTCCTCCTCCCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp TACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTTGGTGGTAGGTCTATGAGGCACTaGTCCTGGAGGGCAGGATCC +
Preference number: 5 (lower is better)
Translates to: YTIQDGCTGGPGRWLLGGRSMRH*SWRAGS
Trigger: GGATCCTGCCCTCCAGGACAAGTGCCTCATAGACCT...ACCACCAAGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp TGCAAGGGCAGCTGGGAGGAGGAGGAGGAGGAGGACACCGAGGACATGGCCAAGAGGTCTATGAGGCACTaGTCCTGGAGGGCAGGATCC +
Preference number: 5 (lower is better)
Translates to: CKGSWEEEEEEDTEDMAKRSMRH*SWRAGS
Trigger: GGATCCTGCCCTCCAGGACAAGTGCCTCATAGACCT...CTTGGCCATGTCCTCGGTGTCCTCCTCCTCCTCCTCCTCCCAGCTGCCCTTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp GAGAGGGTACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTCCAGAGTCGATCTGGTaGTCTGCCACATCGTGGCAA +
Preference number: 5 (lower is better)
Translates to: ERVHYTGRLYRRARAVAPPESIW*SATSWQ
Trigger: TTGCCACGATGTGGCAGACAACCAGATCGACTCTGG...AGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTACCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp GCCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGGATACTCGGTGCTCCTaGGCCTCCTGCAGAGTGTCG +
Preference number: 5 (lower is better)
Translates to: ANKSYHQSSQLPTLQGQLDTRCS*ASCRVS
Trigger: CGACACTCTGCAGGAGGCCAAGGAGCACCGAGTATC...CAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp ACCATGGCCCAAACTCGCCAAAGGGGAACTGCAGTGCCTGGGCTCCTCCCTCCTTTCCACTTGGCCTGTTaGCTCCTGGGCTGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: TMAQTRQRGTAVPGLLPPFHLAC*LLGCCF
Trigger: GAAGCAGCAGCCCAGGAGCAAACAGGCCAAGTGGAA...AGGAGGGAGGAGCCCAGGCACTGCAGTTCCCCTTTGGCGAGTTTGGGCCATGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp GTGAGAGGGTACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCATGTCCTTCTGGTGCTaGTTCTGGATCAGACACTCC +
Preference number: 5 (lower is better)
Translates to: VRGYTIQDGCTGGPGRWLMSFWC*FWIRHS
Trigger: GGAGTGTCTGATCCAGAACAAGCACCAGAAGGACAT...GAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTACCCTCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp AGGAGGACACCGAGGACATGGCCAAGTCTGGATGGGAAGATGCAGTGGGCACCTGATACTCGGTGCTCCTaGGCCTCCTGCAGAGTGTCG +
Preference number: 5 (lower is better)
Translates to: RRTPRTWPSLDGKMQWAPDTRCS*ASCRVS
Trigger: CGACACTCTGCAGGAGGCCAAGGAGCACCGAGTATC...AGGTGCCCACTGCATCTTCCCATCCAGACTTGGCCATGTCCTCGGTGTCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp GAGAGGGTACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTTTGATCTTGAGCAGGTaGACCTTCAGGCACTCTTCC +
Preference number: 5 (lower is better)
Translates to: ERVHYTGRLYRRARAVAPLILSR*TFRHSS
Trigger: GGAAGAGTGCCTGAAGGTCAACCTGCTCAAGATCAA...AGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTACCCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp ACAGTCAAGTCCAGGGACCGGGTTAAAAGAAATGTCTTGCTCCTGGAGTCCCTTGGGAAGGGCCCAAAGTaGGTCCCCGGACCCTGGCCC +
Preference number: 5 (lower is better)
Translates to: TVKSRDRVKRNVLLLESLGKGPK*VPGPWP
Trigger: GGGCCAGGGTCCGGGGACCAACTTTGGGCCCTTCCC...AAGGGACTCCAGGAGCAAGACATTTCTTTTAACCCGGTCCCTGGACTTGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp CTGCAATCTCACTCGCTTATCTTCCAGGGCCTCCATCAGGCAGGACATCTGACGTTGCTCCAGGTGTGTTaGGGGCACACACGGGTCACG +
Preference number: 5 (lower is better)
Translates to: LQSHSLIFQGLHQAGHLTLLQVC*GHTRVT
Trigger: CGTGACCCGTGTGTGCCCCAAACACACCTGGAGCAA...CGTCAGATGTCCTGCCTGATGGAGGCCCTGGAAGATAAGCGAGTGAGATTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
CDS-3UTR CAA 90 bp ACAGAGCCCACCCTACTAAGCCCAATGAGCTACAGAATAGACAGCACTGGGCCCTTGCTCCAGGTGTGTTaGGGGCACACACGGGTCACG +
Preference number: 5 (lower is better)
Translates to: TEPTLLSPMSYRIDSTGPLLQVC*GHTRVT
Trigger: CGTGACCCGTGTGTGCCCCAAACACACCTGGAGCAA...GGGCCCAGTGCTGTCTATTCTGTAGCTCATTGGGCTTAGTAGGGTGGGCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp GAGAGGGTACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTTCTTCAGCACATAGATaGGCAATCTCATCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: ERVHYTGRLYRRARAVAPSSAHR*AISSEQ
Trigger: CTGCTCAGATGAGATTGCCAATCTATGTGCTGAAGA...AGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTACCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp GCCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGTCTCGTGTCACTCTCTaGGTGATCCGTCCACACATC +
Preference number: 5 (lower is better)
Translates to: ANKSYHQSSQLPTLQGQLSRVTL*VIRPHI
Trigger: GATGTGTGGACGGATCACCAAGAGAGTGACACGAGA...CAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS GCA 90 bp TTGTCCTGGAGGGCAGGATCCAGCTTAACATCCATGGCTCGCTGGTaGAGGATCCTCTGGACTTCAGCTCGACATTCTCGTGAGAGCCTC +
Preference number: 5 (lower is better)
Translates to: LSWRAGSSLTSMARW*RILWTSARHSRESL
Trigger: GAGGCTCTCACGAGAATGTCGAGCTGAAGTCCAGAGGATCCTGCACCAGCGAGCCATGGATGTTAAGCTGGATCCTGCCCTCCAGGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000003404.9
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS CCA 90 bp CTCTGTGCACTGCTGACTCCAGGCACATCAGAAGGTAGGAGAGCCTaGCTTCCCGGGACCGAGGAAGGTTTTCCACATTGCACCGGTATT +
Preference number: 5 (lower is better)
Translates to: LCALLTPGTSEGRRA*LPGTEEGFPHCTGI
Trigger: AATACCGGTGCAATGTGGAAAACCTTCCTCGGTCCCGGGAAGCCAGGCTCTCCTACCTTCTGATGTGCCTGGAGTCAGCAGTGCACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003404.9
ENSMUST00000169020.8
CDS CCA 90 bp CACTTGTCCTGGAGGGCAGGATCCAGCTTAACATCCATGGCTCGCTaGTGCAGGATCCTCTGGACTTCAGCTCGACATTCTCGTGAGAGC +
Preference number: 5 (lower is better)
Translates to: HLSWRAGSSLTSMAR*CRILWTSARHSRES
Trigger: GCTCTCACGAGAATGTCGAGCTGAAGTCCAGAGGATCCTGCACCAGCGAGCCATGGATGTTAAGCTGGATCCTGCCCTCCAGGACAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000003404.9
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS CCA 90 bp GTCTTCTCACTGCACCACTTCCCTAGGTCTATGAGGCACTTGTCCTaGAGGGCAGGATCCAGCTTAACATCCATGGCTCGCTGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: VFSLHHFPRSMRHLS*RAGSSLTSMARWCR
Trigger: CCTGCACCAGCGAGCCATGGATGTTAAGCTGGATCCTGCCCTCCAGGACAAGTGCCTCATAGACCTAGGGAAGTGGTGCAGTGAGAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000003404.9
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp TCACTTGCATGGCAAGATCAGAGAAGCCATCTGCTGGAGCCACCTTGGCTGCATAGCACCGCCAGGTTGTaGCTCCAGGTGTGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: SLAWQDQRSHLLEPPWLHSTARL*LQVCLG
Trigger: CCCCAAACACACCTGGAGCAACAACCTGGCGGTGCT...ATGCAGCCAAGGTGGCTCCAGCAGATGGCTTCTCTGATCTTGCCATGCAAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
CDS-3UTR CAA 90 bp CGCCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTTCGGAAATAGTTGACTaGCAAACCTCCCTGGCCACA +
Preference number: 5 (lower is better)
Translates to: RQQKLPPKQPAADAARAASEIVD*QTSLAT
Trigger: TGTGGCCAGGGAGGTTTGCAAGTCAACTATTTCCGA...AGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp TACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTTGGTGGTTCAGCATATCTCAGCTaGAGGCATGAGATAACTTGG +
Preference number: 5 (lower is better)
Translates to: YTIQDGCTGGPGRWLLGGSAYLS*RHEITW
Trigger: CCAAGTTATCTCATGCCTCAAGCTGAGATATGCTGA...ACCACCAAGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp CGCCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTAGCTCTGTCTTGATCTaGAGCAGGTTGACCTTCAGG +
Preference number: 5 (lower is better)
Translates to: RQQKLPPKQPAADAARAASSVLI*SRLTFR
Trigger: CCTGAAGGTCAACCTGCTCAAGATCAAGACAGAGCT...AGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp GAGAGGGTACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTGAAAAGGGAAGTTCATaGTGGAGAGAGCTTTGTAGA +
Preference number: 5 (lower is better)
Translates to: ERVHYTGRLYRRARAVAPEKGSS*WRELCR
Trigger: TCTACAAAGCTCTCTCCACAATGAACTTCCCTTTTC...AGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTACCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168741.8
CDS CCA 90 bp GCAGGATCCAGCTTAACATCCATGGCTCGCTGGTGCAGGATCCTCTaGACTTCAGCTCGACATTCTCGTGAGAGCCTCCTTCCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: AGSSLTSMARWCRIL*TSARHSRESLLPCS
Trigger: AGAGCAAGGAAGGAGGCTCTCACGAGAATGTCGAGCTGAAGTCCAGAGGATCCTGCACCAGCGAGCCATGGATGTTAAGCTGGATCCTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000003404.9
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp TCCTCTGTCATCTCCAGCTCTTCCACACGAAGCTGCTTGCGGCACTTGAGTGATTCGAGCACCGCCAGGTaGTTGCTCCAGGTGTGTTTG +
Preference number: 5 (lower is better)
Translates to: SSVISSSSTRSCLRHLSDSSTAR*LLQVCL
Trigger: CAAACACACCTGGAGCAACAACCTGGCGGTGCTCGA...ATCACTCAAGTGCCGCAAGCAGCTTCGTGTGGAAGAGCTGGAGATGACAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
CDS-3UTR CAA 90 bp GTGAGAGGGTACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTGAGCATTTCCATATaGCACTGTAGAACAGTAGTT +
Preference number: 5 (lower is better)
Translates to: VRGYTIQDGCTGGPGRWLLSISI*HCRTVV
Trigger: AACTACTGTTCTACAGTGCAATATGGAAATGCTCAG...GAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTACCCTCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp TATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCTTGGTGGTCAGGCACAAAGATGTCTGCTTaGCTTTCCTTCAACATGTTT +
Preference number: 5 (lower is better)
Translates to: YTGRLYRRARAVAPWWSGTKMSA*LSFNMF
Trigger: AAACATGTTGAAGGAAAGCAAAGCAGACATCTTTGT...GCCTGACCACCAAGGAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp GTGAGAGGGTACACTATACAGGACGGCTGTACAGGCGGGCCCGGGCGGTGGCTCCCACATTTCAAGAGGTaGATATCATTTTTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: VRGYTIQDGCTGGPGRWLPHFKR*ISFLQS
Trigger: TGACTGCAAAAATGATATCAACCTCTTGAAATGTGG...GAGCCACCGCCCGGGCCCGCCTGTACAGCCGTCCTGTATAGTGTACCCTCTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp CCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGGTCAGCATATCTCAGCTaGAGGCATGAGATAACTTGG +
Preference number: 5 (lower is better)
Translates to: PTKATTKAASCRRCKGSWSAYLS*RHEITW
Trigger: CCAAGTTATCTCATGCCTCAAGCTGAGATATGCTGA...CCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp AGGAGGACACCGAGGACATGGCCAAGTCTGGATGGGAAGATGCAGTGGGCACCTATCTCAATCCGGTCATaGAGGCGCTTTTTGCACTCT +
Preference number: 5 (lower is better)
Translates to: RRTPRTWPSLDGKMQWAPISIRS*RRFLHS
Trigger: AGAGTGCAAAAAGCGCCTCAATGACCGGATTGAGAT...AGGTGCCCACTGCATCTTCCCATCCAGACTTGGCCATGTCCTCGGTGTCCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp AGGAGGACACCGAGGACATGGCCAAGTCTGGATGGGAAGATGCAGTGGGCACCTGGGAGATGTCATCACTaGCATGGCAAGATCAGAGAA +
Preference number: 5 (lower is better)
Translates to: RRTPRTWPSLDGKMQWAPGRCHH*HGKIRE
Trigger: TTCTCTGATCTTGCCATGCAAGTGATGACATCTCCC...AGGTGCCCACTGCATCTTCCCATCCAGACTTGGCCATGTCCTCGGTGTCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS GCA 90 bp CTTCAGCTCGACATTCTCGTGAGAGCCTCCTTCCTTGCTCTTCTGTaGGGTAGGCATGTCTGTATAGGCAAGAAAACACAGCTCCAGGGG +
Preference number: 5 (lower is better)
Translates to: LQLDILVRASFLALL*GRHVCIGKKTQLQG
Trigger: CCCCTGGAGCTGTGTTTTCTTGCCTATACAGACATGCCTACCGCACAGAAGAGCAAGGAAGGAGGCTCTCACGAGAATGTCGAGCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003404.9
ENSMUST00000169020.8
CDS CCA 90 bp ATCAGACAGTGGAGGGTTCGCCCTTTCCGATGTAATCCAGAACAATaGTGTTCAATCTCCCCTCGACAGCTCAGGATGATCTCGGGGCTC +
Preference number: 5 (lower is better)
Translates to: IRQWRVRPFRCNPEQ*CSISPRQLRMISGL
Trigger: GAGCCCCGAGATCATCCTGAGCTGTCGAGGGGAGATTGAACACCATTGTTCTGGATTACATCGGAAAGGGCGAACCCTCCACTGTCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000003404.9
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp GGGGGTTCTGGAAGTCACACTGATGCACAAGAGTGGATGCTCTCTAGGAAGGCCATGTCCTTCTGGTGCTaGTTCTGGATCAGACACTCC +
Preference number: 5 (lower is better)
Translates to: GGSGSHTDAQEWMLSRKAMSFWC*FWIRHS
Trigger: GGAGTGTCTGATCCAGAACAAGCACCAGAAGGACAT...GGCCTTCCTAGAGAGCATCCACTCTTGTGCATCAGTGTGACTTCCAGAACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp CAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGGGTTCTTGATGTCACTCTaGCAGGCTTCATACAGATCT +
Preference number: 5 (lower is better)
Translates to: QQKLPPKQPAADAARAAGFLMSL*QASYRS
Trigger: AGATCTGTATGAAGCCTGCAAGAGTGACATCAAGAA...CCCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp GCCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGTTCTTGATGTCACTCTaGCAGGCTTCATACAGATCT +
Preference number: 5 (lower is better)
Translates to: ANKSYHQSSQLPTLQGQLFLMSL*QASYRS
Trigger: AGATCTGTATGAAGCCTGCAAGAGTGACATCAAGAA...CAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp AGGCAGGTAAACCTTCGCCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACTCATTGAGGCGCTTTTaGCACTCTGGCTGCAATCTC +
Preference number: 5 (lower is better)
Translates to: RQVNLRQQKLPPKQPAADSLRRF*HSGCNL
Trigger: GAGATTGCAGCCAGAGTGCAAAAAGCGCCTCAATGA...GTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGGCGAAGGTTTACCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp CAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGGGACAGGATGTAGTTCTTaGAGGGAGATGTCATCACTT +
Preference number: 5 (lower is better)
Translates to: QQKLPPKQPAADAARAAGTGCSS*REMSSL
Trigger: AAGTGATGACATCTCCCTCAAAGAACTACATCCTGT...CCCAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS CCA 90 bp AACACAGCTCCAGGGGGCATAAGTTCACTGGTCTCATTCCAACCATaGGTATGGCAAAGGCGGGAAGCATCTCCCTGGCATTTTCGGTAT +
Preference number: 5 (lower is better)
Translates to: NTAPGGISSLVSFQP*VWQRREASPWHFRY
Trigger: ATACCGAAAATGCCAGGGAGATGCTTCCCGCCTTTGCCATACCCATGGTTGGAATGAGACCAGTGAACTTATGCCCCCTGGAGCTGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000003404.9
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp ACAGTCAAGTCCAGGGACCGGGTTAAAAGAAATGTCTTGCTCCTGGAGTCCCTTCCAGAGTCGATCTGGTaGTCTGCCACATCGTGGCAA +
Preference number: 5 (lower is better)
Translates to: TVKSRDRVKRNVLLLESLPESIW*SATSWQ
Trigger: TTGCCACGATGTGGCAGACAACCAGATCGACTCTGG...AAGGGACTCCAGGAGCAAGACATTTCTTTTAACCCGGTCCCTGGACTTGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp CAAGTCTGGATGGGAAGATGCAGTGGGCACCTGATGCTGCTCTACTGTGGGTGTTTACACAGCTCTGTCTaGATCTTGAGCAGGTTGACC +
Preference number: 5 (lower is better)
Translates to: QVWMGRCSGHLMLLYCGCLHSSV*ILSRLT
Trigger: GGTCAACCTGCTCAAGATCAAGACAGAGCTGTGTAA...ACACCCACAGTAGAGCAGCATCAGGTGCCCACTGCATCTTCCCATCCAGACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp TGTCTACAGGCAGGTAAACCTTCGCCAACAAAAGCTACCACCAAAGCAGCCAGCTCTCGTGTCACTCTCTaGGTGATCCGTCCACACATC +
Preference number: 5 (lower is better)
Translates to: CLQAGKPSPTKATTKAASSRVTL*VIRPHI
Trigger: GATGTGTGGACGGATCACCAAGAGAGTGACACGAGA...GCTGGCTGCTTTGGTGGTAGCTTTTGTTGGCGAAGGTTTACCTGCCTGTAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS CCA 90 bp GTCTCATTCCAACCATGGGTATGGCAAAGGCGGGAAGCATCTCCCTaGCATTTTCGGTATAAAACAGGGTCCAACTTCCAATCCCGAGAG +
Preference number: 5 (lower is better)
Translates to: VSFQPWVWQRREASP*HFRYKTGSNFQSRE
Trigger: CTCTCGGGATTGGAAGTTGGACCCTGTTTTATACCGAAAATGCCAGGGAGATGCTTCCCGCCTTTGCCATACCCATGGTTGGAATGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000003404.9
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp CAAGTCTGGATGGGAAGATGCAGTGGGCACCTGATGCTGCTCTACTGTGGGTGTGCCACAGATTCAAATTaGGGATCAGTAGTCAGGTTC +
Preference number: 5 (lower is better)
Translates to: QVWMGRCSGHLMLLYCGCATDSN*GSVVRF
Trigger: GAACCTGACTACTGATCCCAAATTTGAATCTGTGGC...ACACCCACAGTAGAGCAGCATCAGGTGCCCACTGCATCTTCCCATCCAGACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp TCGCCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTTGGTTATCATCTGTTaGCATTTGGGATCCATCAAT +
Preference number: 5 (lower is better)
Translates to: SPTKATTKAASCRRCKGSLVIIC*HLGSIN
Trigger: ATTGATGGATCCCAAATGCAAACAGATGATAACCAA...GCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp GCCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCTGTTGGTTATCATCTGTTaGCATTTGGGATCCATCAAT +
Preference number: 5 (lower is better)
Translates to: ANKSYHQSSQLPTLQGQLLVIIC*HLGSIN
Trigger: ATTGATGGATCCCAAATGCAAACAGATGATAACCAA...CAGCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp TCGCCAACAAAAGCTACCACCAAAGCAGCCAGCTGCCGACGCTGCAAGGGCAGCACAAAGATGTCTGCTTaGCTTTCCTTCAACATGTTT +
Preference number: 5 (lower is better)
Translates to: SPTKATTKAASCRRCKGSTKMSA*LSFNMF
Trigger: AAACATGTTGAAGGAAAGCAAAGCAGACATCTTTGT...GCTGCCCTTGCAGCGTCGGCAGCTGGCTGCTTTGGTGGTAGCTTTTGTTGGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS TCA 90 bp CGCTCCCGATCATCTCGGCAAGCAAAATACAAATGCCGGTCTAAATaGAAGTCATCCGAGGACAGCTCAGCCACCCTAAGAATGGCTTTC +
Preference number: 5 (lower is better)
Translates to: RSRSSRQAKYKCRSK*KSSEDSSATLRMAF
Trigger: GAAAGCCATTCTTAGGGTGGCTGAGCTGTCCTCGGATGACTTTCATTTAGACCGGCATTTGTATTTTGCTTGCCGAGATGATCGGGAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003404.9
ENSMUST00000169020.8
CDS GCA 90 bp TACAGACTCACAAGCTTCATTCAAAGCTCGATCAATGCGGTAGTCTaGACCAGGGTCAGTCTCCTGAATCAGTGTCTGAAGCGCCTGTTG +
Preference number: 5 (lower is better)
Translates to: YRLTSFIQSSINAVV*TRVSLLNQCLKRLL
Trigger: CAACAGGCGCTTCAGACACTGATTCAGGAGACTGACCCTGGTGCAGACTACCGCATTGATCGAGCTTTGAATGAAGCTTGTGAGTCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003404.9
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp GGCACATGCTGTGTGAAGAACGGGGTCCACAAAGATGTCTGCTTTGCTTTCCTTTCGGAAATAGTTGACTaGCAAACCTCCCTGGCCACA +
Preference number: 5 (lower is better)
Translates to: GTCCVKNGVHKDVCFAFLSEIVD*QTSLAT
Trigger: TGTGGCCAGGGAGGTTTGCAAGTCAACTATTTCCGA...AAGGAAAGCAAAGCAGACATCTTTGTGGACCCCGTTCTTCACACAGCATGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
CDS-3UTR CAA 90 bp ACAGTCAAGTCCAGGGACCGGGTTAAAAGAAATGTCTTGCTCCTGGAGTCCCTTTGTCTGAAGCGCCTGTaGGCAGTTCATTCCAAGGTT +
Preference number: 5 (lower is better)
Translates to: TVKSRDRVKRNVLLLESLCLKRL*AVHSKV
Trigger: AACCTTGGAATGAACTGCCAACAGGCGCTTCAGACA...AAGGGACTCCAGGAGCAAGACATTTCTTTTAACCCGGTCCCTGGACTTGACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp CAAGTCTGGATGGGAAGATGCAGTGGGCACCTGATGCTGCTCTACTGTGGGTGTTTTAACACATCCTCCTaGCAGGCCATTTTGAACTTG +
Preference number: 5 (lower is better)
Translates to: QVWMGRCSGHLMLLYCGCFNTSS*QAILNL
Trigger: CAAGTTCAAAATGGCCTGCAAGGAGGATGTGTTAAA...ACACCCACAGTAGAGCAGCATCAGGTGCCCACTGCATCTTCCCATCCAGACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp AAGTTTAGTTTGTCTGGTTCTTGGCTCATTGACAGATTTCTGACCTGGTCCACATCCTGCAGAGTGTCGTaGCGCACAGTGGTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: KFSLSGSWLIDRFLTWSTSCRVS*RTVVLR
Trigger: CCTGAGCACCACTGTGCGCAACGACACTCTGCAGGA...TGTGGACCAGGTCAGAAATCTGTCAATGAGCCAAGAACCAGACAAACTAAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp GTTGCAGGTCAGGTGAGTCGGTCTGGAAGTACCAGCAGTTCTGTAGGTATGACATGGGTGATCTGGCGCTaGGTTATCATCTGTTTGCAT +
Preference number: 5 (lower is better)
Translates to: VAGQVSRSGSTSSSVGMTWVIWR*VIICLH
Trigger: ATGCAAACAGATGATAACCAAGCGCCAGATCACCCA...TGTCATACCTACAGAACTGCTGGTACTTCCAGACCGACTCACCTGACCTGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp GATGGCTGGGGATCCTGCTCCTGTAAAGCTCAGACTATGGAAGGTTGTCAGATCTTACACAGCTCTGTCTaGATCTTGAGCAGGTTGACC +
Preference number: 5 (lower is better)
Translates to: DGWGSCSCKAQTMEGCQILHSSV*ILSRLT
Trigger: GGTCAACCTGCTCAAGATCAAGACAGAGCTGTGTAA...GATCTGACAACCTTCCATAGTCTGAGCTTTACAGGAGCAGGATCCCCAGCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS TCA 90 bp AGTAGTCAGGTTCAGCTTGTAATTCCACAACAAATGATTGCAGTCTaGAGAAATCTCGTTCTCGGGCTCCCTCACGTCCTGCAGGCACTC +
Preference number: 5 (lower is better)
Translates to: SSQVQLVIPQQMIAV*RNLVLGLPHVLQAL
Trigger: GAGTGCCTGCAGGACGTGAGGGAGCCCGAGAACGAGATTTCTTCAGACTGCAATCATTTGTTGTGGAATTACAAGCTGAACCTGACTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp ACTGCCCGGCCAGGTTGGGGTTCTTGGCAAGTTCATGTCTATCTAATTTATACCTTGATCTTGAGCAGGTaGACCTTCAGGCACTCTTCC +
Preference number: 5 (lower is better)
Translates to: TARPGWGSWQVHVYLIYTLILSR*TFRHSS
Trigger: GGAAGAGTGCCTGAAGGTCAACCTGCTCAAGATCAA...GGTATAAATTAGATAGACATGAACTTGCCAAGAACCCCAACCTGGCCGGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp ATTGTCTACAGGCAGGTAAACCTTCGCCAACAAAAGCTACCACCAAAGCAGCCAAGCTCTGTCTTGATCTaGAGCAGGTTGACCTTCAGG +
Preference number: 5 (lower is better)
Translates to: IVYRQVNLRQQKLPPKQPSSVLI*SRLTFR
Trigger: CCTGAAGGTCAACCTGCTCAAGATCAAGACAGAGCT...TGGCTGCTTTGGTGGTAGCTTTTGTTGGCGAAGGTTTACCTGCCTGTAGACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp ACTGCCCGGCCAGGTTGGGGTTCTTGGCAAGTTCATGTCTATCTAATTTATACCTCATTGAGGCGCTTTTaGCACTCTGGCTGCAATCTC +
Preference number: 5 (lower is better)
Translates to: TARPGWGSWQVHVYLIYTSLRRF*HSGCNL
Trigger: GAGATTGCAGCCAGAGTGCAAAAAGCGCCTCAATGA...GGTATAAATTAGATAGACATGAACTTGCCAAGAACCCCAACCTGGCCGGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp TCACCAAAATGTAACACTGAGCCAGTGCCTACTGGAGTGGGTACACGCAGCAAAATCTCAATCCGGTCATaGAGGCGCTTTTTGCACTCT +
Preference number: 5 (lower is better)
Translates to: SPKCNTEPVPTGVGTRSKISIRS*RRFLHS
Trigger: AGAGTGCAAAAAGCGCCTCAATGACCGGATTGAGAT...TTTGCTGCGTGTACCCACTCCAGTAGGCACTGGCTCAGTGTTACATTTTGGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS TCA 90 bp CGAGGACAGCTCAGCCACCCTAAGAATGGCTTTCTTGCAGAGTTCTaGGACTTGAATCTTCGGCTCTTTTTCTTCTGCCTCTTTTACCAG +
Preference number: 5 (lower is better)
Translates to: RGQLSHPKNGFLAEF*DLNLRLFFFCLFYQ
Trigger: CTGGTAAAAGAGGCAGAAGAAAAAGAGCCGAAGATTCAAGTCTCAGAACTCTGCAAGAAAGCCATTCTTAGGGTGGCTGAGCTGTCCTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000003404.9
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp TCTGGGTCCATCATCTCCGTCTCCTGCAGCTTAAATACTTTCTGGTGGCAACGGAGGTTGATATCATTTTaGCAGTCATCCATGAAGCCG +
Preference number: 5 (lower is better)
Translates to: SGSIISVSCSLNTFWWQRRLISF*QSSMKP
Trigger: CGGCTTCATGGATGACTGCAAAAATGATATCAACCT...CCGTTGCCACCAGAAAGTATTTAAGCTGCAGGAGACGGAGATGATGGACCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
CDS-3UTR CAA 90 bp GTTGCAGGTCAGGTGAGTCGGTCTGGAAGTACCAGCAGTTCTGTAGGTATGACATTTAACACATCCTCCTaGCAGGCCATTTTGAACTTG +
Preference number: 5 (lower is better)
Translates to: VAGQVSRSGSTSSSVGMTFNTSS*QAILNL
Trigger: CAAGTTCAAAATGGCCTGCAAGGAGGATGTGTTAAA...TGTCATACCTACAGAACTGCTGGTACTTCCAGACCGACTCACCTGACCTGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp TCACCAAAATGTAACACTGAGCCAGTGCCTACTGGAGTGGGTACACGCAGCAAATCTTCAGCACATAGATaGGCAATCTCATCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: SPKCNTEPVPTGVGTRSKSSAHR*AISSEQ
Trigger: CTGCTCAGATGAGATTGCCAATCTATGTGCTGAAGA...TTTGCTGCGTGTACCCACTCCAGTAGGCACTGGCTCAGTGTTACATTTTGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS GCA 90 bp AAGAGCCGGTGTTCACAGTCTTCCACCATCTTCTCTGTGTATAAATaGTCCATCAGACATGAGAGAATCATTGGGTCTCCGGATCGTATG +
Preference number: 5 (lower is better)
Translates to: KSRCSQSSTIFSVYK*SIRHERIIGSPDRM
Trigger: CATACGATCCGGAGACCCAATGATTCTCTCATGTCTGATGGAGCATTTATACACAGAGAAGATGGTGGAAGACTGTGAACACCGGCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003404.9
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp ACTGCCCGGCCAGGTTGGGGTTCTTGGCAAGTTCATGTCTATCTAATTTATACCGCCACAGATTCAAATTaGGGATCAGTAGTCAGGTTC +
Preference number: 5 (lower is better)
Translates to: TARPGWGSWQVHVYLIYTATDSN*GSVVRF
Trigger: GAACCTGACTACTGATCCCAAATTTGAATCTGTGGC...GGTATAAATTAGATAGACATGAACTTGCCAAGAACCCCAACCTGGCCGGGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp TGTCTACAGGCAGGTAAACCTTCGCCAACAAAAGCTACCACCAAAGCAGCCAGCCTGAGCATTTCCATATaGCACTGTAGAACAGTAGTT +
Preference number: 5 (lower is better)
Translates to: CLQAGKPSPTKATTKAASLSISI*HCRTVV
Trigger: AACTACTGTTCTACAGTGCAATATGGAAATGCTCAG...GCTGGCTGCTTTGGTGGTAGCTTTTGTTGGCGAAGGTTTACCTGCCTGTAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS GCA 90 bp CCATCAGACATGAGAGAATCATTGGGTCTCCGGATCGTATGTGTTTaGAGGCTGTCTGTATTACAGACTCACAAGCTTCATTCAAAGCTC +
Preference number: 5 (lower is better)
Translates to: PSDMRESLGLRIVCV*RLSVLQTHKLHSKL
Trigger: GAGCTTTGAATGAAGCTTGTGAGTCTGTAATACAGACAGCCTGCAAACACATACGATCCGGAGACCCAATGATTCTCTCATGTCTGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003404.9
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp TGTCTACAGGCAGGTAAACCTTCGCCAACAAAAGCTACCACCAAAGCAGCCAGCCATCTTGGTAATGTATaGATGACACTGATACTCAGT +
Preference number: 5 (lower is better)
Translates to: CLQAGKPSPTKATTKAASHLGNV*MTLILS
Trigger: ACTGAGTATCAGTGTCATCAATACATTACCAAGATG...GCTGGCTGCTTTGGTGGTAGCTTTTGTTGGCGAAGGTTTACCTGCCTGTAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp CTCTGTCTTGATCTTGAGCAGGTTGACCTTCAGGCACTCTTCCACTTGGCCTGTCCACATTTCAAGAGGTaGATATCATTTTTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: LCLDLEQVDLQALFHLACPHFKR*ISFLQS
Trigger: TGACTGCAAAAATGATATCAACCTCTTGAAATGTGG...ACAGGCCAAGTGGAAGAGTGCCTGAAGGTCAACCTGCTCAAGATCAAGACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000164283.8
CDS GCA 90 bp AGGCACATGCTGTGTGAAGAACGGGGTCCACAAAGATGTCTGCTTTaGTTTCCTTCAACATGTTTAACACTTCCTGAAAAGGGAAGTTCA +
Preference number: 5 (lower is better)
Translates to: RHMLCEERGPQRCLL*FPSTCLTLPEKGSS
Trigger: TGAACTTCCCTTTTCAGGAAGTGTTAAACATGTTGAAGGAAAGCAAAGCAGACATCTTTGTGGACCCCGTTCTTCACACAGCATGTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168741.8
CDS-3UTR CAA 90 bp CTAAATCTTCAGAAGCCATCTCTTCTGGCCTGTACTATTGTTCAGCAAACTAAGGGGAGATGTCATCACTaGCATGGCAAGATCAGAGAA +
Preference number: 5 (lower is better)
Translates to: LNLQKPSLLACTIVQQTKGRCHH*HGKIRE
Trigger: TTCTCTGATCTTGCCATGCAAGTGATGACATCTCCC...CTTAGTTTGCTGAACAATAGTACAGGCCAGAAGAGATGGCTTCTGAAGATTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp AGAATTGTCTACAGGCAGGTAAACCTTCGCCAACAAAAGCTACCACCAAAGCAGCATCTTGGTAATGTATaGATGACACTGATACTCAGT +
Preference number: 5 (lower is better)
Translates to: RIVYRQVNLRQQKLPPKQHLGNV*MTLILS
Trigger: ACTGAGTATCAGTGTCATCAATACATTACCAAGATG...CTGCTTTGGTGGTAGCTTTTGTTGGCGAAGGTTTACCTGCCTGTAGACAATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp AAGTTTAGTTTGTCTGGTTCTTGGCTCATTGACAGATTTCTGACCTGGTCCACAAGGTTGATATCATTTTaGCAGTCATCCATGAAGCCG +
Preference number: 5 (lower is better)
Translates to: KFSLSGSWLIDRFLTWSTRLISF*QSSMKP
Trigger: CGGCTTCATGGATGACTGCAAAAATGATATCAACCT...TGTGGACCAGGTCAGAAATCTGTCAATGAGCCAAGAACCAGACAAACTAAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp AGAATTGTCTACAGGCAGGTAAACCTTCGCCAACAAAAGCTACCACCAAAGCAGGTACTCAGCTGCTTCTaGTTTTCTTTTAGACATTCA +
Preference number: 5 (lower is better)
Translates to: RIVYRQVNLRQQKLPPKQVLSCF*FSFRHS
Trigger: TGAATGTCTAAAAGAAAACAAGAAGCAGCTGAGTAC...CTGCTTTGGTGGTAGCTTTTGTTGGCGAAGGTTTACCTGCCTGTAGACAATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp AAGTTTAGTTTGTCTGGTTCTTGGCTCATTGACAGATTTCTGACCTGGTCCACAACAGGATGTAGTTCTTaGAGGGAGATGTCATCACTT +
Preference number: 5 (lower is better)
Translates to: KFSLSGSWLIDRFLTWSTTGCSS*REMSSL
Trigger: AAGTGATGACATCTCCCTCAAAGAACTACATCCTGT...TGTGGACCAGGTCAGAAATCTGTCAATGAGCCAAGAACCAGACAAACTAAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS-3UTR CAA 90 bp CTAAATCTTCAGAAGCCATCTCTTCTGGCCTGTACTATTGTTCAGCAAACTAAGGTACTCAGCTGCTTCTaGTTTTCTTTTAGACATTCA +
Preference number: 5 (lower is better)
Translates to: LNLQKPSLLACTIVQQTKVLSCF*FSFRHS
Trigger: TGAATGTCTAAAAGAAAACAAGAAGCAGCTGAGTAC...CTTAGTTTGCTGAACAATAGTACAGGCCAGAAGAGATGGCTTCTGAAGATTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169020.8
CDS CCA 90 bp GTTAGTGCTTCTCTACACTTTTCACTCATGGATTCTTCAAACTTATaGTTAAATAGGCATTTATACACTCTTCCTTCACCAGCTTGTGTA +
Preference number: 5 (lower is better)
Translates to: VSASLHFSLMDSSNL*LNRHLYTLPSPACV
Trigger: TACACAAGCTGGTGAAGGAAGAGTGTATAAATGCCTATTTAACCATAAGTTTGAAGAATCCATGAGTGAAAAGTGTAGAGAAGCACTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003404.9
ENSMUST00000169020.8
CDS GCA 72 bp GGCGGCTGTTGGCCGGCCGGGCTGCCGCCTCCACCTTaGCCTGGGAAGGGCCCAAAGTTGGTCCCCGGACCC +
Preference number: 6 (lower is better)
Translates to: GGCWPAGLPPPP*PGKGPKLVPGP
Trigger: GGGTCCGGGGACCAACTTTGGGCCCTTCCCAGGGCAAGGTGGAGGCGGCAGCCCGGCCGGCCAACAGCCGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000003404.9
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS GCA 72 bp CGGACCCTGGCCCTGACCGTGACCATTCTGGGCCCCTaGTGCCGCGAGCAGCAGCAGCGGCAACGCCGCCGA +
Preference number: 6 (lower is better)
Translates to: RTLALTVTILGP*CREQQQRQRRR
Trigger: TCGGCGGCGTTGCCGCTGCTGCTGCTCGCGGCAGCAGGGGCCCAGAATGGTCACGGTCAGGGCCAGGGTCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000003404.9
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS CAA 72 bp AGGCGGCTGTTGGCCGGCCGGGCTGCCGCCTCCACCTaGCCCTGGGAAGGGCCCAAAGTTGGTCCCCGGACC +
Preference number: 6 (lower is better)
Translates to: RRLLAGRAAAST*PWEGPKVGPRT
Trigger: GGTCCGGGGACCAACTTTGGGCCCTTCCCAGGGCAAGGTGGAGGCGGCAGCCCGGCCGGCCAACAGCCGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000003404.9
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS CAA 90 bp AGGCTGCTGAGGCGGCTGTTGGCCGGCCGGGCTGCCGCCTCCACCTaGCCCTGGGAAGGGCCCAAAGTTGGTCCCCGGACCCTGGCCCTG +
Preference number: 6 (lower is better)
Translates to: RLLRRLLAGRAAAST*PWEGPKVGPRTLAL
Trigger: CAGGGCCAGGGTCCGGGGACCAACTTTGGGCCCTTCCCAGGGCAAGGTGGAGGCGGCAGCCCGGCCGGCCAACAGCCGCCTCAGCAGCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000003404.9
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS GCA 72 bp ACTGAGGCTGCTGAGGCGGCTGTTGGCCGGCCGGGCTaGCGCCTCCACCTTGCCCTGGGAAGGGCCCAAAGT +
Preference number: 6 (lower is better)
Translates to: TEAAEAAVGRPG*RLHLALGRAQS
Trigger: ACTTTGGGCCCTTCCCAGGGCAAGGTGGAGGCGGCAGCCCGGCCGGCCAACAGCCGCCTCAGCAGCCTCAGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000003404.9
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS CAA 90 bp TCGGGCTCCCTCACGTCCTGCAGGCACTCGAGCACCGCCAGGTTGTaGCTCCAGGTGTGTTTGGGGCACACACGGGTCACGTCCTCCCGG +
Preference number: 6 (lower is better)
Translates to: SGSLTSCRHSSTARL*LQVCLGHTRVTSSR
Trigger: CCGGGAGGACGTGACCCGTGTGTGCCCCAAACACACCTGGAGCAACAACCTGGCGGTGCTCGAGTGCCTGCAGGACGTGAGGGAGCCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS CCA 72 bp TGCCGCCTCCACCTTGCCCTGGGAAGGGCCCAAAGTTaGTCCCCGGACCCTGGCCCTGACCGTGACCATTCT +
Preference number: 6 (lower is better)
Translates to: CRLHLALGRAQS*SPDPGPDRDHS
Trigger: AGAATGGTCACGGTCAGGGCCAGGGTCCGGGGACCAACTTTGGGCCCTTCCCAGGGCAAGGTGGAGGCGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000003404.9
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS CAA 72 bp CACTCGAGCACCGCCAGGTTGTTGCTCCAGGTGTGTTaGGGGCACACACGGGTCACGTCCTCCCGGCAGGAC +
Preference number: 6 (lower is better)
Translates to: HSSTARLLLQVC*GHTRVTSSRQD
Trigger: GTCCTGCCGGGAGGACGTGACCCGTGTGTGCCCCAAACACACCTGGAGCAACAACCTGGCGGTGCTCGAGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000003404.9
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS CAA 90 bp TCCTGCAGGCACTCGAGCACCGCCAGGTTGTTGCTCCAGGTGTGTTaGGGGCACACACGGGTCACGTCCTCCCGGCAGGACTCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: SCRHSSTARLLLQVC*GHTRVTSSRQDSSS
Trigger: GGAGGAAGAGTCCTGCCGGGAGGACGTGACCCGTGTGTGCCCCAAACACACCTGGAGCAACAACCTGGCGGTGCTCGAGTGCCTGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000003404.9
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS CAA 90 bp TTCTCGGGCTCCCTCACGTCCTGCAGGCACTCGAGCACCGCCAGGTaGTTGCTCCAGGTGTGTTTGGGGCACACACGGGTCACGTCCTCC +
Preference number: 6 (lower is better)
Translates to: FSGSLTSCRHSSTAR*LLQVCLGHTRVTSS
Trigger: GGAGGACGTGACCCGTGTGTGCCCCAAACACACCTGGAGCAACAACCTGGCGGTGCTCGAGTGCCTGCAGGACGTGAGGGAGCCCGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS CCA 72 bp ACTCGAGCACCGCCAGGTTGTTGCTCCAGGTGTGTTTaGGGCACACACGGGTCACGTCCTCCCGGCAGGACT +
Preference number: 6 (lower is better)
Translates to: TRAPPGCCSRCV*GTHGSRPPGRT
Trigger: AGTCCTGCCGGGAGGACGTGACCCGTGTGTGCCCCAAACACACCTGGAGCAACAACCTGGCGGTGCTCGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000003404.9
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS CAA 72 bp TCCCTCACGTCCTGCAGGCACTCGAGCACCGCCAGGTaGTTGCTCCAGGTGTGTTTGGGGCACACACGGGTC +
Preference number: 6 (lower is better)
Translates to: SLTSCRHSSTAR*LLQVCLGHTRV
Trigger: GACCCGTGTGTGCCCCAAACACACCTGGAGCAACAACCTGGCGGTGCTCGAGTGCCTGCAGGACGTGAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000003404.9
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS CAA 90 bp AACAACTCCCTCACGTCCTGCAGGCACTCGAGCACCGCCAGGTTGTaGCTCCAGGTGTGTTTGGGGCACACACGGGTCACGTCCTCCCGG +
Preference number: 6 (lower is better)
Translates to: NNSLTSCRHSSTARL*LQVCLGHTRVTSSR
Trigger: CCGGGAGGACGTGACCCGTGTGTGCCCCAAACACACCTGGAGCAACAACCTGGCGGTGCTCGAGTGCCTGCAGGACGTGAGGGAGTTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003404.9
CDS CAA 90 bp CACAACAACTCCCTCACGTCCTGCAGGCACTCGAGCACCGCCAGGTaGTTGCTCCAGGTGTGTTTGGGGCACACACGGGTCACGTCCTCC +
Preference number: 6 (lower is better)
Translates to: HNNSLTSCRHSSTAR*LLQVCLGHTRVTSS
Trigger: GGAGGACGTGACCCGTGTGTGCCCCAAACACACCTGGAGCAACAACCTGGCGGTGCTCGAGTGCCTGCAGGACGTGAGGGAGTTGTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003404.9
CDS TCA 72 bp GCACTCACTGCTCACCTGCCGCCCTCTGTGCACTGCTaGCTCCAGGCACATCAGAAGGTAGGAGAGCCTGGC +
Preference number: 6 (lower is better)
Translates to: ALTAHLPPSVHC*LQAHQKVGEPG
Trigger: GCCAGGCTCTCCTACCTTCTGATGTGCCTGGAGTCAGCAGTGCACAGAGGGCGGCAGGTGAGCAGTGAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003404.9
ENSMUST00000169020.8
CDS GCA 72 bp TCACGTCCTGCAGGCACTCGAGCACCGCCAGGTTGTTaGTCCAGGTGTGTTTGGGGCACACACGGGTCACGT +
Preference number: 6 (lower is better)
Translates to: SRPAGTRAPPGC*SRCVWGTHGSR
Trigger: ACGTGACCCGTGTGTGCCCCAAACACACCTGGAGCAACAACCTGGCGGTGCTCGAGTGCCTGCAGGACGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000003404.9
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS GCA 72 bp TGCGTCGGTAATCCAGCATCTCACCTTGGCACTCACTaGTCACCTGCCGCCCTCTGTGCACTGCTGACTCCA +
Preference number: 6 (lower is better)
Translates to: CVGNPASHLGTH*SPAALCALLTP
Trigger: TGGAGTCAGCAGTGCACAGAGGGCGGCAGGTGAGCAGTGAGTGCCAAGGTGAGATGCTGGATTACCGACGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003404.9
ENSMUST00000169020.8
CDS GCA 72 bp TCTGAAGAAATCTCGTTCTCGGGCTCCCTCACGTCCTaGAGGCACTCGAGCACCGCCAGGTTGTTGCTCCAG +
Preference number: 6 (lower is better)
Translates to: SEEISFSGSLTS*RHSSTARLLLQ
Trigger: CTGGAGCAACAACCTGGCGGTGCTCGAGTGCCTGCAGGACGTGAGGGAGCCCGAGAACGAGATTTCTTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS CAA 72 bp TTCCATCAGCATGCGTCGGTAATCCAGCATCTCACCTaGGCACTCACTGCTCACCTGCCGCCCTCTGTGCAC +
Preference number: 6 (lower is better)
Translates to: FHQHASVIQHLT*ALTAHLPPSVH
Trigger: GTGCACAGAGGGCGGCAGGTGAGCAGTGAGTGCCAAGGTGAGATGCTGGATTACCGACGCATGCTGATGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003404.9
ENSMUST00000169020.8
CDS CAA 90 bp GTCTCCGTCTTCTCACTGCACCACTTCCCTAGGTCTATGAGGCACTaGTCCTGGAGGGCAGGATCCAGCTTAACATCCATGGCTCGCTGG +
Preference number: 6 (lower is better)
Translates to: VSVFSLHHFPRSMRH*SWRAGSSLTSMARW
Trigger: CCAGCGAGCCATGGATGTTAAGCTGGATCCTGCCCTCCAGGACAAGTGCCTCATAGACCTAGGGAAGTGGTGCAGTGAGAAGACGGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000003404.9
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS CCA 72 bp CTGCACCACTTCCCTAGGTCTATGAGGCACTTGTCCTaGAGGGCAGGATCCAGCTTAACATCCATGGCTCGC +
Preference number: 6 (lower is better)
Translates to: LHHFPRSMRHLS*RAGSSLTSMAR
Trigger: GCGAGCCATGGATGTTAAGCTGGATCCTGCCCTCCAGGACAAGTGCCTCATAGACCTAGGGAAGTGGTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000003404.9
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS CCA 72 bp CCAGGGGGCATAAGTTCACTGGTCTCATTCCAACCATaGGTATGGCAAAGGCGGGAAGCATCTCCCTGGCAT +
Preference number: 6 (lower is better)
Translates to: PGGISSLVSFQP*VWQRREASPWH
Trigger: ATGCCAGGGAGATGCTTCCCGCCTTTGCCATACCCATGGTTGGAATGAGACCAGTGAACTTATGCCCCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000003404.9
ENSMUST00000169020.8
CDS CCA 72 bp AGCTTAACATCCATGGCTCGCTGGTGCAGGATCCTCTaGACTTCAGCTCGACATTCTCGTGAGAGCCTCCTT +
Preference number: 6 (lower is better)
Translates to: SLTSMARWCRIL*TSARHSRESLL
Trigger: AAGGAGGCTCTCACGAGAATGTCGAGCTGAAGTCCAGAGGATCCTGCACCAGCGAGCCATGGATGTTAAGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000003404.9
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS CCA 72 bp GGCATAAGTTCACTGGTCTCATTCCAACCATGGGTATaGCAAAGGCGGGAAGCATCTCCCTGGCATTTTCGG +
Preference number: 6 (lower is better)
Translates to: GISSLVSFQPWV*QRREASPWHFR
Trigger: CCGAAAATGCCAGGGAGATGCTTCCCGCCTTTGCCATACCCATGGTTGGAATGAGACCAGTGAACTTATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003404.9
ENSMUST00000169020.8
CDS CAA 72 bp TTCTCACTGCACCACTTCCCTAGGTCTATGAGGCACTaGTCCTGGAGGGCAGGATCCAGCTTAACATCCATG +
Preference number: 6 (lower is better)
Translates to: FSLHHFPRSMRH*SWRAGSSLTSM
Trigger: CATGGATGTTAAGCTGGATCCTGCCCTCCAGGACAAGTGCCTCATAGACCTAGGGAAGTGGTGCAGTGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000003404.9
ENSMUST00000168741.8
ENSMUST00000169020.8
CDS TCA 72 bp AACAATGGTGTTCAATCTCCCCTCGACAGCTCAGGATaGTCTCGGGGCTCAGAGAGAAGTCTTCCATCAGCA +
Preference number: 6 (lower is better)
Translates to: NNGVQSPLDSSG*SRGSERSLPSA
Trigger: TGCTGATGGAAGACTTCTCTCTGAGCCCCGAGATCATCCTGAGCTGTCGAGGGGAGATTGAACACCATTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000003404.9
ENSMUST00000169020.8
CDS CCA 72 bp TGGAGGGTTCGCCCTTTCCGATGTAATCCAGAACAATaGTGTTCAATCTCCCCTCGACAGCTCAGGATGATC +
Preference number: 6 (lower is better)
Translates to: WRVRPFRCNPEQ*CSISPRQLRMI
Trigger: GATCATCCTGAGCTGTCGAGGGGAGATTGAACACCATTGTTCTGGATTACATCGGAAAGGGCGAACCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003404.9
ENSMUST00000169020.8
CDS GCA 72 bp GACATTCTCGTGAGAGCCTCCTTCCTTGCTCTTCTGTaGGGTAGGCATGTCTGTATAGGCAAGAAAACACAG +
Preference number: 6 (lower is better)
Translates to: DILVRASFLALL*GRHVCIGKKTQ
Trigger: CTGTGTTTTCTTGCCTATACAGACATGCCTACCGCACAGAAGAGCAAGGAAGGAGGCTCTCACGAGAATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003404.9
ENSMUST00000169020.8
CDS GCA 72 bp ACAAGCTTCATTCAAAGCTCGATCAATGCGGTAGTCTaGACCAGGGTCAGTCTCCTGAATCAGTGTCTGAAG +
Preference number: 6 (lower is better)
Translates to: TSFIQSSINAVV*TRVSLLNQCLK
Trigger: CTTCAGACACTGATTCAGGAGACTGACCCTGGTGCAGACTACCGCATTGATCGAGCTTTGAATGAAGCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003404.9
ENSMUST00000169020.8
CDS CAA 90 bp GTTGTAATACTCTTTTTACACAGCTCTGTCTTGATCTTGAGCAGGTaGACCTTCAGGCACTCTTCCACTTGGCCTGTTTGCTCCTGGGCT +
Preference number: 6 (lower is better)
Translates to: VVILFLHSSVLILSR*TFRHSSTWPVCSWA
Trigger: AGCCCAGGAGCAAACAGGCCAAGTGGAAGAGTGCCTGAAGGTCAACCTGCTCAAGATCAAGACAGAGCTGTGTAAAAAGAGTATTACAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000168741.8
CDS TCA 72 bp TCATCTCGGCAAGCAAAATACAAATGCCGGTCTAAATaGAAGTCATCCGAGGACAGCTCAGCCACCCTAAGA +
Preference number: 6 (lower is better)
Translates to: SSRQAKYKCRSK*KSSEDSSATLR
Trigger: TCTTAGGGTGGCTGAGCTGTCCTCGGATGACTTTCATTTAGACCGGCATTTGTATTTTGCTTGCCGAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003404.9
ENSMUST00000169020.8
CDS TCA 72 bp GTTCAGCTTGTAATTCCACAACAAATGATTGCAGTCTaGAGAAATCTCGTTCTCGGGCTCCCTCACGTCCTG +
Preference number: 6 (lower is better)
Translates to: VQLVIPQQMIAV*RNLVLGLPHVL
Trigger: CAGGACGTGAGGGAGCCCGAGAACGAGATTTCTTCAGACTGCAATCATTTGTTGTGGAATTACAAGCTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS GCA 72 bp TTACAGACTCACAAGCTTCATTCAAAGCTCGATCAATaGGGTAGTCTGCACCAGGGTCAGTCTCCTGAATCA +
Preference number: 6 (lower is better)
Translates to: LQTHKLHSKLDQ*GSLHQGQSPES
Trigger: TGATTCAGGAGACTGACCCTGGTGCAGACTACCGCATTGATCGAGCTTTGAATGAAGCTTGTGAGTCTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003404.9
ENSMUST00000169020.8
CDS CAA 72 bp CATGAGAGAATCATTGGGTCTCCGGATCGTATGTGTTaGCAGGCTGTCTGTATTACAGACTCACAAGCTTCA +
Preference number: 6 (lower is better)
Translates to: HERIIGSPDRMC*QAVCITDSQAS
Trigger: TGAAGCTTGTGAGTCTGTAATACAGACAGCCTGCAAACACATACGATCCGGAGACCCAATGATTCTCTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003404.9
ENSMUST00000169020.8
CDS CAA 72 bp CTGTGTATAAATGCTCCATCAGACATGAGAGAATCATaGGGTCTCCGGATCGTATGTGTTTGCAGGCTGTCT +
Preference number: 6 (lower is better)
Translates to: LCINAPSDMRES*GLRIVCVCRLS
Trigger: AGACAGCCTGCAAACACATACGATCCGGAGACCCAATGATTCTCTCATGTCTGATGGAGCATTTATACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003404.9
ENSMUST00000169020.8
CDS CAA 90 bp CCATCTTCTCTGTGTATAAATGCTCCATCAGACATGAGAGAATCATaGGGTCTCCGGATCGTATGTGTTTGCAGGCTGTCTGTATTACAG +
Preference number: 6 (lower is better)
Translates to: PSSLCINAPSDMRES*GLRIVCVCRLSVLQ
Trigger: CTGTAATACAGACAGCCTGCAAACACATACGATCCGGAGACCCAATGATTCTCTCATGTCTGATGGAGCATTTATACACAGAGAAGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003404.9
ENSMUST00000169020.8
CDS CAA 90 bp CAATCTGTTGTTGTAATACTCTTTTTACACAGCTCTGTCTTGATCTaGAGCAGGTTGACCTTCAGGCACTCTTCCACTTGGCCTGTTTGC +
Preference number: 6 (lower is better)
Translates to: QSVVVILFLHSSVLI*SRLTFRHSSTWPVC
Trigger: GCAAACAGGCCAAGTGGAAGAGTGCCTGAAGGTCAACCTGCTCAAGATCAAGACAGAGCTGTGTAAAAAGAGTATTACAACAACAGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000168741.8
CDS CAA 90 bp GGTATCCAATCTGTTGTTGTAATACTCTTTTTACACAGCTCTGTCTaGATCTTGAGCAGGTTGACCTTCAGGCACTCTTCCACTTGGCCT +
Preference number: 6 (lower is better)
Translates to: GIQSVVVILFLHSSV*ILSRLTFRHSSTWP
Trigger: AGGCCAAGTGGAAGAGTGCCTGAAGGTCAACCTGCTCAAGATCAAGACAGAGCTGTGTAAAAAGAGTATTACAACAACAGATTGGATACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000168741.8
CDS GCA 72 bp ATGAGAGAATCATTGGGTCTCCGGATCGTATGTGTTTaGAGGCTGTCTGTATTACAGACTCACAAGCTTCAT +
Preference number: 6 (lower is better)
Translates to: MRESLGLRIVCV*RLSVLQTHKLH
Trigger: ATGAAGCTTGTGAGTCTGTAATACAGACAGCCTGCAAACACATACGATCCGGAGACCCAATGATTCTCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003404.9
ENSMUST00000169020.8
CDS GCA 72 bp TGTTCACAGTCTTCCACCATCTTCTCTGTGTATAAATaGTCCATCAGACATGAGAGAATCATTGGGTCTCCG +
Preference number: 6 (lower is better)
Translates to: CSQSSTIFSVYK*SIRHERIIGSP
Trigger: CGGAGACCCAATGATTCTCTCATGTCTGATGGAGCATTTATACACAGAGAAGATGGTGGAAGACTGTGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003404.9
ENSMUST00000169020.8
CDS CAA 72 bp GTTGTAATACTCTTTTTACACAGCTCTGTCTTGATCTaGAGCAGGTTGACCTTCAGGCACTCTTCCACTTGG +
Preference number: 6 (lower is better)
Translates to: VVILFLHSSVLI*SRLTFRHSSTW
Trigger: CCAAGTGGAAGAGTGCCTGAAGGTCAACCTGCTCAAGATCAAGACAGAGCTGTGTAAAAAGAGTATTACAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000168741.8
CDS CAA 72 bp TCTGTTGTTGTAATACTCTTTTTACACAGCTCTGTCTaGATCTTGAGCAGGTTGACCTTCAGGCACTCTTCC +
Preference number: 6 (lower is better)
Translates to: SVVVILFLHSSV*ILSRLTFRHSS
Trigger: GGAAGAGTGCCTGAAGGTCAACCTGCTCAAGATCAAGACAGAGCTGTGTAAAAAGAGTATTACAACAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000168741.8
CDS CAA 90 bp CAAGCGATAATCACTGAAAATGATGGCCGTCATCTTGGTAATGTATaGATGACACTGATACTCAGTGATGTTGCCTCGATGATCCACCAA +
Preference number: 6 (lower is better)
Translates to: QAIITENDGRHLGNV*MTLILSDVASMIHQ
Trigger: TTGGTGGATCATCGAGGCAACATCACTGAGTATCAGTGTCATCAATACATTACCAAGATGACGGCCATCATTTTCAGTGATTATCGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000003404.9
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS CCA 72 bp ATCCACCAAGCAGGAAACCATGTAACCTTTTCCAACTaGTTCTTCCGCACATTCTTTAATCTCGGAAATAGT +
Preference number: 6 (lower is better)
Translates to: IHQAGNHVTFSN*FFRTFFNLGNS
Trigger: ACTATTTCCGAGATTAAAGAATGTGCGGAAGAACCAGTTGGAAAAGGTTACATGGTTTCCTGCTTGGTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000003404.9
ENSMUST00000164283.8
ENSMUST00000169020.8
CDS CAA 72 bp ATCACTGAAAATGATGGCCGTCATCTTGGTAATGTATaGATGACACTGATACTCAGTGATGTTGCCTCGATG +
Preference number: 6 (lower is better)
Translates to: ITENDGRHLGNV*MTLILSDVASM
Trigger: CATCGAGGCAACATCACTGAGTATCAGTGTCATCAATACATTACCAAGATGACGGCCATCATTTTCAGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000003404.9
ENSMUST00000164283.8
ENSMUST00000169020.8