Pregenerated sensors for GLDN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046167Ensembl transcript IDs: ENSMUST00000056740.6
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGAGGTTCTCTTACTCCATCTGATGCTGTCCTTAGCTGTTCCCTCTaGCAAAGCCCAAGCCACATAAAATGCTGCCTGTCAGTCCGTAGA | + |
|
Preference number: 1 (lower is better) Translates to: GGSLTPSDAVLSCSL*QSPSHIKCCLSVRR Trigger: TCTACGGACTGACAGGCAGCATTTTATGTGGCTTGGGCTTTGGCAGAGGGAACAGCTAAGGACAGCATCAGATGGAGTAAGAGAACCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR TCA 90 bp | ATTCTTAGGTGCAGGGATGCGATGGTACAGGAAAAAGAGCTAAGCTaGCTTTGGCCTTTGAGCCAATTGCCTTCCCTCATTCTAAACAGT | + |
|
Preference number: 1 (lower is better) Translates to: ILRCRDAMVQEKELS*LWPLSQLPSLILNS Trigger: ACTGTTTAGAATGAGGGAAGGCAATTGGCTCAAAGGCCAAAGTCAGCTTAGCTCTTTTTCCTGTACCATCGCATCCCTGCACCTAAGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR TCA 90 bp | CACTCTGATAACAATCCCATGGCCTTGGCAAAAGGGACCACGAACTaGAGATATCCTGTTTACTTTCCCAGCAGCAAACAATATGATCAG | + |
|
Preference number: 1 (lower is better) Translates to: HSDNNPMALAKGTTN*RYPVYFPSSKQYDQ Trigger: CTGATCATATTGTTTGCTGCTGGGAAAGTAAACAGGATATCTTCAGTTCGTGGTCCCTTTTGCCAAGGCCATGGGATTGTTATCAGAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR CCA 90 bp | TTTAAAAGCTGTGATGACCAACTGCAAAACCATCTAATCAAGAAGTaGGGAAGCTTTGGGACCCATGACCTTGAGAACTCAACAGGTTCA | + |
|
Preference number: 1 (lower is better) Translates to: FKSCDDQLQNHLIKK*GSFGTHDLENSTGS Trigger: TGAACCTGTTGAGTTCTCAAGGTCATGGGTCCCAAAGCTTCCCCACTTCTTGATTAGATGGTTTTGCAGTTGGTCATCACAGCTTTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR-3UTR TCA 90 bp | CCCACTGAGAGTGGGTTTGGAACAGCTGGCCAGTCTTTCCTGGACAGTTTCTGTACCAGACTCAGGGAGTaGGCCCTTCTGAGAACCTGG | + |
|
Preference number: 2 (lower is better) Translates to: PTESGFGTAGQSFLDSFCTRLRE*ALLRTW Trigger: CCAGGTTCTCAGAAGGGCTCACTCCCTGAGTCTGGT...ACAGAAACTGTCCAGGAAAGACTGGCCAGCTGTTCCAAACCCACTCTCAGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR-3UTR TCA 90 bp | AACTCAACAGGTTCACCAGTAACAGCTGCCTGGGTGCTTTCAGAGGGCAGGGAACCACAGCTTCCTCTTTaGAGCTCCACAGGCCTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: NSTGSPVTAAWVLSEGREPQLPL*SSTGLP Trigger: AGGCAGGCCTGTGGAGCTTCAAAGAGGAAGCTGTGG...TTCCCTGCCCTCTGAAAGCACCCAGGCAGCTGTTACTGGTGAACCTGTTGAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR-3UTR GCA 90 bp | GAGGACAGACCCAACTTTGAGGACCACGTGGGAGTGAACATCTCCACGGCTGGACTTAGCTGTTCCCTCTaGCAAAGCCCAAGCCACATA | + |
|
Preference number: 2 (lower is better) Translates to: EDRPNFEDHVGVNISTAGLSCSL*QSPSHI Trigger: TATGTGGCTTGGGCTTTGGCAGAGGGAACAGCTAAG...TCCAGCCGTGGAGATGTTCACTCCCACGTGGTCCTCAAAGTTGGGTCTGTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR-3UTR TCA 90 bp | GAGGACAGACCCAACTTTGAGGACCACGTGGGAGTGAACATCTCCACGGCTGGAGCTTTCTGTTGGGCTTaGCCAAACCCTAGACAATGT | + |
|
Preference number: 2 (lower is better) Translates to: EDRPNFEDHVGVNISTAGAFCWA*PNPRQC Trigger: ACATTGTCTAGGGTTTGGTCAAGCCCAACAGAAAGC...TCCAGCCGTGGAGATGTTCACTCCCACGTGGTCCTCAAAGTTGGGTCTGTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR-3UTR TCA 90 bp | CCCACTGAGAGTGGGTTTGGAACAGCTGGCCAGTCTTTCCTGGACAGTTTCTGTGCTGACTTTGGCCTTTaGGCCAATTGCCTTCCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: PTESGFGTAGQSFLDSFCADFGL*ANCLPS Trigger: TGAGGGAAGGCAATTGGCTCAAAGGCCAAAGTCAGC...ACAGAAACTGTCCAGGAAAGACTGGCCAGCTGTTCCAAACCCACTCTCAGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR-3UTR TCA 90 bp | GAGGACAGACCCAACTTTGAGGACCACGTGGGAGTGAACATCTCCACGGCTGGATGGCCACTTAGTGTTTaGCACTCTGATAACAATCCC | + |
|
Preference number: 2 (lower is better) Translates to: EDRPNFEDHVGVNISTAGWPLSV*HSDNNP Trigger: GGGATTGTTATCAGAGTGTCAAACACTAAGTGGCCA...TCCAGCCGTGGAGATGTTCACTCCCACGTGGTCCTCAAAGTTGGGTCTGTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR-3UTR GCA 90 bp | GAGGACAGACCCAACTTTGAGGACCACGTGGGAGTGAACATCTCCACGGCTGGAAGCCACATAAAATGCTaGCTGTCAGTCCGTAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: EDRPNFEDHVGVNISTAGSHIKC*LSVRRK Trigger: CTTTCTACGGACTGACAGGCAGCATTTTATGTGGCT...TCCAGCCGTGGAGATGTTCACTCCCACGTGGTCCTCAAAGTTGGGTCTGTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR-3UTR CCA 90 bp | CCCACTGAGAGTGGGTTTGGAACAGCTGGCCAGTCTTTCCTGGACAGTTTCTGTTTGACAGCATCTAGATaGCCTATGGGCCTGATGCAG | + |
|
Preference number: 2 (lower is better) Translates to: PTESGFGTAGQSFLDSFCLTASR*PMGLMQ Trigger: CTGCATCAGGCCCATAGGCCATCTAGATGCTGTCAA...ACAGAAACTGTCCAGGAAAGACTGGCCAGCTGTTCCAAACCCACTCTCAGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR-3UTR TCA 90 bp | GAGGACAGACCCAACTTTGAGGACCACGTGGGAGTGAACATCTCCACGGCTGGACTCCATTTAGAGTTCTaGGCCTGTATCTATTCATGG | + |
|
Preference number: 2 (lower is better) Translates to: EDRPNFEDHVGVNISTAGLHLEF*ACIYSW Trigger: CCATGAATAGATACAGGCTCAGAACTCTAAATGGAG...TCCAGCCGTGGAGATGTTCACTCCCACGTGGTCCTCAAAGTTGGGTCTGTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR-3UTR CCA 90 bp | AACTCAACAGGTTCACCAGTAACAGCTGCCTGGGTGCTTTCAGAGGGCAGGGAACTGGCCAGTCTTTCCTaGACAGTTTCTGTAGTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: NSTGSPVTAAWVLSEGRELASLS*TVSVVS Trigger: AGACACTACAGAAACTGTCCAGGAAAGACTGGCCAG...TTCCCTGCCCTCTGAAAGCACCCAGGCAGCTGTTACTGGTGAACCTGTTGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR-3UTR GCA 90 bp | CCCACTGAGAGTGGGTTTGGAACAGCTGGCCAGTCTTTCCTGGACAGTTTCTGTAGCCATAAGAGCCAGTaGACCTTCCCTAAATACCAA | + |
|
Preference number: 2 (lower is better) Translates to: PTESGFGTAGQSFLDSFCSHKSQ*TFPKYQ Trigger: TTGGTATTTAGGGAAGGTGCACTGGCTCTTATGGCT...ACAGAAACTGTCCAGGAAAGACTGGCCAGCTGTTCCAAACCCACTCTCAGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR-3UTR TCA 90 bp | AACTCAACAGGTTCACCAGTAACAGCTGCCTGGGTGCTTTCAGAGGGCAGGGAAATGGTGCCTGTTTTCTaGAAAAACCATCATGTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: NSTGSPVTAAWVLSEGREMVPVF*KNHHVS Trigger: GGAAACATGATGGTTTTTTCAGAAAACAGGCACCAT...TTCCCTGCCCTCTGAAAGCACCCAGGCAGCTGTTACTGGTGAACCTGTTGAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR-3UTR TCA 90 bp | AACTCAACAGGTTCACCAGTAACAGCTGCCTGGGTGCTTTCAGAGGGCAGGGAAAATATGATCAGAAATTaGCAGCATCTAGATGGCCTA | + |
|
Preference number: 2 (lower is better) Translates to: NSTGSPVTAAWVLSEGRENMIRN*QHLDGL Trigger: TAGGCCATCTAGATGCTGTCAATTTCTGATCATATT...TTCCCTGCCCTCTGAAAGCACCCAGGCAGCTGTTACTGGTGAACCTGTTGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR-3UTR TCA 90 bp | CTTTCTTTCTGTAAAGGCCAGGCAGTAATGGTTCAGGATTTACAGAGCGGCTCTAAAGGGACCACGAACTaGAGATATCCTGTTTACTTT | + |
|
Preference number: 2 (lower is better) Translates to: LSFCKGQAVMVQDLQSGSKGTTN*RYPVYF Trigger: AAAGTAAACAGGATATCTTCAGTTCGTGGTCCCTTT...AGAGCCGCTCTGTAAATCCTGAACCATTACTGCCTGGCCTTTACAGAAAGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR CAA 90 bp | AGATATCCTGTTTACTTTCCCAGCAGCAAACAATATGATCAGAAATaGACAGCATCTAGATGGCCTATGGGCCTGATGCAGCTCCATTTA | + |
|
Preference number: 2 (lower is better) Translates to: RYPVYFPSSKQYDQK*TASRWPMGLMQLHL Trigger: TAAATGGAGCTGCATCAGGCCCATAGGCCATCTAGATGCTGTCAATTTCTGATCATATTGTTTGCTGCTGGGAAAGTAAACAGGATATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR CAA 90 bp | CTTTTCAAGGACTGTGCTTCCTCATTTGTCATCTCACCTTGTCATTaGATTATGAGGGTAAAAAGACTTCGAATGAGCCCAGCACCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LFKDCASSFVISPCH*IMRVKRLRMSPAPE Trigger: TTCTGGTGCTGGGCTCATTCGAAGTCTTTTTACCCTCATAATCAAATGACAAGGTGAGATGACAAATGAGGAAGCACAGTCCTTGAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR TCA 72 bp | TGTCAGTCCGTAGAAAGCCTAACCAGACTCAGGGAGTaGGCCCTTCTGAGAACCTGGCTCGTTCCCTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: CQSVESLTRLRE*ALLRTWLVPCP Trigger: AGGACAGGGAACGAGCCAGGTTCTCAGAAGGGCTCACTCCCTGAGTCTGGTTAGGCTTTCTACGGACTGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR-3UTR CAA 90 bp | AACTCAACAGGTTCACCAGTAACAGCTGCCTGGGTGCTTTCAGAGGGCAGGGAACGGGGGAGAGCTAACTaGCTGAGTTTGAGGAGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: NSTGSPVTAAWVLSEGRERGRAN*LSLRRD Trigger: ATCCCTCCTCAAACTCAGCAAGTTAGCTCTCCCCCG...TTCCCTGCCCTCTGAAAGCACCCAGGCAGCTGTTACTGGTGAACCTGTTGAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR TCA 72 bp | AAGAGGACAGACCCAACTTTGAGGACCACGTGGGAGTaGACATCTCCACGGCTGGAGGTTCTCTTACTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: KRTDPTLRTTWE*TSPRLEVLLLH Trigger: ATGGAGTAAGAGAACCTCCAGCCGTGGAGATGTTCACTCCCACGTGGTCCTCAAAGTTGGGTCTGTCCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR-3UTR CAA 90 bp | AACTCAACAGGTTCACCAGTAACAGCTGCCTGGGTGCTTTCAGAGGGCAGGGAAAGAGCTAAGCTGACTTaGGCCTTTGAGCCAATTGCC | + |
|
Preference number: 3 (lower is better) Translates to: NSTGSPVTAAWVLSEGRERAKLT*AFEPIA Trigger: GGCAATTGGCTCAAAGGCCAAAGTCAGCTTAGCTCT...TTCCCTGCCCTCTGAAAGCACCCAGGCAGCTGTTACTGGTGAACCTGTTGAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR GCA 72 bp | AGCTGTTCCCTCTGCCAAAGCCCAAGCCACATAAAATaGTGCCTGTCAGTCCGTAGAAAGCCTAACCAGACT | + |
|
Preference number: 3 (lower is better) Translates to: SCSLCQSPSHIK*CLSVRRKPNQT Trigger: AGTCTGGTTAGGCTTTCTACGGACTGACAGGCAGCATTTTATGTGGCTTGGGCTTTGGCAGAGGGAACAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR GCA 72 bp | CTTACTCCATCTGATGCTGTCCTTAGCTGTTCCCTCTaGCAAAGCCCAAGCCACATAAAATGCTGCCTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LTPSDAVLSCSL*QSPSHIKCCLS Trigger: TGACAGGCAGCATTTTATGTGGCTTGGGCTTTGGCAGAGGGAACAGCTAAGGACAGCATCAGATGGAGTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR TCA 72 bp | TGCAGGGATGCGATGGTACAGGAAAAAGAGCTAAGCTaGCTTTGGCCTTTGAGCCAATTGCCTTCCCTCATT | + |
|
Preference number: 3 (lower is better) Translates to: CRDAMVQEKELS*LWPLSQLPSLI Trigger: AATGAGGGAAGGCAATTGGCTCAAAGGCCAAAGTCAGCTTAGCTCTTTTTCCTGTACCATCGCATCCCTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR-3UTR CAA 90 bp | AACTCAACAGGTTCACCAGTAACAGCTGCCTGGGTGCTTTCAGAGGGCAGGGAACAATATGATCAGAAATaGACAGCATCTAGATGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: NSTGSPVTAAWVLSEGREQYDQK*TASRWP Trigger: AGGCCATCTAGATGCTGTCAATTTCTGATCATATTG...TTCCCTGCCCTCTGAAAGCACCCAGGCAGCTGTTACTGGTGAACCTGTTGAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR CCA 72 bp | GGCCACTTAGTGTTTGACACTCTGATAACAATCCCATaGCCTTGGCAAAAGGGACCACGAACTGAAGATATC | + |
|
Preference number: 3 (lower is better) Translates to: GHLVFDTLITIP*PWQKGPRTEDI Trigger: GATATCTTCAGTTCGTGGTCCCTTTTGCCAAGGCCATGGGATTGTTATCAGAGTGTCAAACACTAAGTGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR CCA 72 bp | CTGAGAGTGGGTTTGGAACAGCTGGCCAGTCTTTCCTaGACAGTTTCTGTAGTGTCTTTTTCTATATTCCGG | + |
|
Preference number: 3 (lower is better) Translates to: LRVGLEQLASLS*TVSVVSFSIFR Trigger: CCGGAATATAGAAAAAGACACTACAGAAACTGTCCAGGAAAGACTGGCCAGCTGTTCCAAACCCACTCTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR TCA 72 bp | AACAATCCCATGGCCTTGGCAAAAGGGACCACGAACTaGAGATATCCTGTTTACTTTCCCAGCAGCAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: NNPMALAKGTTN*RYPVYFPSSKQ Trigger: TTGTTTGCTGCTGGGAAAGTAAACAGGATATCTTCAGTTCGTGGTCCCTTTTGCCAAGGCCATGGGATTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR TCA 72 bp | CAATGCCTGAGTAAGGTACTTGCTATGCTTGGAGGATaGCGAGTGACTTTTCAAGGACTGTGCTTCCTCATT | + |
|
Preference number: 3 (lower is better) Translates to: QCLSKVLAMLGG*RVTFQGLCFLI Trigger: AATGAGGAAGCACAGTCCTTGAAAAGTCACTCGTCATCCTCCAAGCATAGCAAGTACCTTACTCAGGCATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR CCA 72 bp | TGTGATGACCAACTGCAAAACCATCTAATCAAGAAGTaGGGAAGCTTTGGGACCCATGACCTTGAGAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: CDDQLQNHLIKK*GSFGTHDLENS Trigger: TGAGTTCTCAAGGTCATGGGTCCCAAAGCTTCCCCACTTCTTGATTAGATGGTTTTGCAGTTGGTCATCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR CCA 72 bp | AGCAAACAATATGATCAGAAATTGACAGCATCTAGATaGCCTATGGGCCTGATGCAGCTCCATTTAGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SKQYDQKLTASR*PMGLMQLHLEF Trigger: GAACTCTAAATGGAGCTGCATCAGGCCCATAGGCCATCTAGATGCTGTCAATTTCTGATCATATTGTTTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR TCA 72 bp | ACTATTTTAGCAGTGAGCCTGAAACACTGTGTTGAGTaGTATAGAATGAAGTCCTGTTTGCAAGAAAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: TILAVSLKHCVE*YRMKSCLQEKE Trigger: TTCCTTTTCTTGCAAACAGGACTTCATTCTATATCACTCAACACAGTGTTTCAGGCTCACTGCTAAAATAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR TCA 72 bp | GAATTGGAGAATCACTTGATTTCATACAGACATAAATaGAGTGCTTTTAGAACAGCTTGGCTACAAGTGACA | + |
|
Preference number: 3 (lower is better) Translates to: ELENHLISYRHK*SAFRTAWLQVT Trigger: TGTCACTTGTAGCCAAGCTGTTCTAAAAGCACTTCATTTATGTCTGTATGAAATCAAGTGATTCTCCAATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR CCA 90 bp | GAGGACAGACCCAACTTTGAGGACCACGTGGGAGTGAACATCTCCACGGCTGGACATGGGGTCCTGGGATaGTTCGGGGACCCGGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: EDRPNFEDHVGVNISTAGHGVLG*FGDPAR Trigger: CCGGGCCGGGTCCCCGAACCATCCCAGGACCCCATG...TCCAGCCGTGGAGATGTTCACTCCCACGTGGTCCTCAAAGTTGGGTCTGTCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR CCA 90 bp | CCCACTGAGAGTGGGTTTGGAACAGCTGGCCAGTCTTTCCTGGACAGTTTCTGTGGCTCCTGGAGGTCCTaGTGGGCCCGGTGGTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PTESGFGTAGQSFLDSFCGSWRS*WARWSC Trigger: ACAGGACCACCGGGCCCACCAGGACCTCCAGGAGCC...ACAGAAACTGTCCAGGAAAGACTGGCCAGCTGTTCCAAACCCACTCTCAGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR TCA 90 bp | GAGGACAGACCCAACTTTGAGGACCACGTGGGAGTGAACATCTCCACGGCTGGAGGATCCCTCGGGCTATaGAGGCATTGCCAGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EDRPNFEDHVGVNISTAGGSLGL*RHCQPW Trigger: CCAAGGCTGGCAATGCCTTCATAGCCCGAGGGATCC...TCCAGCCGTGGAGATGTTCACTCCCACGTGGTCCTCAAAGTTGGGTCTGTCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR CCA 90 bp | AACTCAACAGGTTCACCAGTAACAGCTGCCTGGGTGCTTTCAGAGGGCAGGGAAGCAGGCTCGCCGTTGTaGCTGCGCTTGTTGCGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: NSTGSPVTAAWVLSEGREAGSPL*LRLLRA Trigger: AGCGCGCAACAAGCGCAGCCACAACGGCGAGCCTGC...TTCCCTGCCCTCTGAAAGCACCCAGGCAGCTGTTACTGGTGAACCTGTTGAGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR GCA 90 bp | CCCACTGAGAGTGGGTTTGGAACAGCTGGCCAGTCTTTCCTGGACAGTTTCTGTTGTGGCTGCGCTTGTTaGGCGCTGCGCTCATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PTESGFGTAGQSFLDSFCCGCAC*ALRSWG Trigger: ACCCCATGAGCGCAGCGCGCAACAAGCGCAGCCACA...ACAGAAACTGTCCAGGAAAGACTGGCCAGCTGTTCCAAACCCACTCTCAGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR CCA 90 bp | GAGGACAGACCCAACTTTGAGGACCACGTGGGAGTGAACATCTCCACGGCTGGACCATCTGATCCATTGTaGCCTGGTAACCCGCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EDRPNFEDHVGVNISTAGPSDPL*PGNPPA Trigger: AGCCGGCGGGTTACCAGGCCACAATGGATCAGATGG...TCCAGCCGTGGAGATGTTCACTCCCACGTGGTCCTCAAAGTTGGGTCTGTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR CCA 90 bp | GAGGACAGACCCAACTTTGAGGACCACGTGGGAGTGAACATCTCCACGGCTGGACCCCTGGATTTCCGGTaGCTCCAGGTAACCCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: EDRPNFEDHVGVNISTAGPLDFR*LQVTPF Trigger: AAATGGGGTTACCTGGAGCCACCGGAAATCCAGGGG...TCCAGCCGTGGAGATGTTCACTCCCACGTGGTCCTCAAAGTTGGGTCTGTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR CCA 90 bp | GGAGGTTCTCTTACTCCATCTGATGCTGTCCTTAGCTGTTCCCTCTGCCAAAGCGGGCCAGGGGGACCTTaGTCACCTTTGGCACCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GGSLTPSDAVLSCSLCQSGPGGP*SPLAPV Trigger: GACAGGTGCCAAAGGTGACCAAGGTCCCCCTGGCCC...GCTTTGGCAGAGGGAACAGCTAAGGACAGCATCAGATGGAGTAAGAGAACCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR CCA 90 bp | CCCACTGAGAGTGGGTTTGGAACAGCTGGCCAGTCTTTCCTGGACAGTTTCTGTGTGGCCGAGGGCCTTTaGATCTTCTGCTTCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PTESGFGTAGQSFLDSFCVAEGL*IFCFQE Trigger: CTCCTGGAAGCAGAAGATCCAAAGGCCCTCGGCCAC...ACAGAAACTGTCCAGGAAAGACTGGCCAGCTGTTCCAAACCCACTCTCAGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR GCA 90 bp | CCCACTGAGAGTGGGTTTGGAACAGCTGGCCAGTCTTTCCTGGACAGTTTCTGTCCCTTGTCACCTTTCTaGCCTGGTGGGCCCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: PTESGFGTAGQSFLDSFCPLSPF*PGGPSF Trigger: AAATGAGGGCCCACCAGGGCAGAAAGGTGACAAGGG...ACAGAAACTGTCCAGGAAAGACTGGCCAGCTGTTCCAAACCCACTCTCAGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR GCA 90 bp | GGAGGTTCTCTTACTCCATCTGATGCTGTCCTTAGCTGTTCCCTCTGCCAAAGCGGCCTTTGGATCTTCTaGTTCCAGGAGGGCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GGSLTPSDAVLSCSLCQSGLWIF*FQEGLE Trigger: CTCCAGGCCCTCCTGGAAGCAGAAGATCCAAAGGCC...GCTTTGGCAGAGGGAACAGCTAAGGACAGCATCAGATGGAGTAAGAGAACCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR CCA 90 bp | AACTCAACAGGTTCACCAGTAACAGCTGCCTGGGTGCTTTCAGAGGGCAGGGAAGCTGTTGAACACGTTTaGTGGCCGAGGGCCTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NSTGSPVTAAWVLSEGREAVEHV*WPRAFG Trigger: TCCAAAGGCCCTCGGCCACCAAACGTGTTCAACAGC...TTCCCTGCCCTCTGAAAGCACCCAGGCAGCTGTTACTGGTGAACCTGTTGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR TCA 90 bp | CCCACTGAGAGTGGGTTTGGAACAGCTGGCCAGTCTTTCCTGGACAGTTTCTGTTGGGGTATGTGGTGTTaGTGTGCTGTGTCACGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PTESGFGTAGQSFLDSFCWGMWC*CAVSRR Trigger: TCTCCGTGACACAGCACATCAACACCACATACCCCA...ACAGAAACTGTCCAGGAAAGACTGGCCAGCTGTTCCAAACCCACTCTCAGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR CCA 90 bp | GGAGGTTCTCTTACTCCATCTGATGCTGTCCTTAGCTGTTCCCTCTGCCAAAGCGTGAGGCAGATGCCCTaGGTACTGTTGCACAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGSLTPSDAVLSCSLCQSVRQMP*VLLHRS Trigger: AGACCTGTGCAACAGTACCCAGGGCATCTGCCTCAC...GCTTTGGCAGAGGGAACAGCTAAGGACAGCATCAGATGGAGTAAGAGAACCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR CCA 90 bp | GGAGGTTCTCTTACTCCATCTGATGCTGTCCTTAGCTGTTCCCTCTGCCAAAGCTTCTCCCTTTTCCCCTaGATTTCCGGTGGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGSLTPSDAVLSCSLCQSFSLFP*ISGGSR Trigger: CCTGGAGCCACCGGAAATCCAGGGGAAAAGGGAGAA...GCTTTGGCAGAGGGAACAGCTAAGGACAGCATCAGATGGAGTAAGAGAACCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR CCA 90 bp | AACTCAACAGGTTCACCAGTAACAGCTGCCTGGGTGCTTTCAGAGGGCAGGGAAGTTGAACACGTTTGGTaGCCGAGGGCCTTTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: NSTGSPVTAAWVLSEGREVEHVW*PRAFGS Trigger: AGATCCAAAGGCCCTCGGCCACCAAACGTGTTCAAC...TTCCCTGCCCTCTGAAAGCACCCAGGCAGCTGTTACTGGTGAACCTGTTGAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR TCA 90 bp | AACTCAACAGGTTCACCAGTAACAGCTGCCTGGGTGCTTTCAGAGGGCAGGGAATATCTTTGGTGTCTGTaGCATAGAGGATCCCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: NSTGSPVTAAWVLSEGREYLWCL*HRGSLG Trigger: CCCGAGGGATCCTCTATGTCACAGACACCAAAGATA...TTCCCTGCCCTCTGAAAGCACCCAGGCAGCTGTTACTGGTGAACCTGTTGAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR TCA 90 bp | GAGGACAGACCCAACTTTGAGGACCACGTGGGAGTGAACATCTCCACGGCTGGAAATCAAAGGCAAACGTaGCCCTCGTATCTTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EDRPNFEDHVGVNISTAGNQRQT*PSYLWC Trigger: ACACCAAAGATACGAGGGTCACGTTTGCCTTTGATT...TCCAGCCGTGGAGATGTTCACTCCCACGTGGTCCTCAAAGTTGGGTCTGTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR CCA 90 bp | CCCACTGAGAGTGGGTTTGGAACAGCTGGCCAGTCTTTCCTGGACAGTTTCTGTGACCTTGGTCACCTTTaGCACCTGTCAAAAGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: PTESGFGTAGQSFLDSFCDLGHL*HLSKAR Trigger: ACGTGCTTTTGACAGGTGCCAAAGGTGACCAAGGTC...ACAGAAACTGTCCAGGAAAGACTGGCCAGCTGTTCCAAACCCACTCTCAGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR CCA 90 bp | GAGGACAGACCCAACTTTGAGGACCACGTGGGAGTGAACATCTCCACGGCTGGATGTTGTATGACAGCATaGCAAGAACAGACTGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: EDRPNFEDHVGVNISTAGCCMTA*QEQTGT Trigger: TGTCCCAGTCTGTTCTTGCCATGCTGTCATACAACA...TCCAGCCGTGGAGATGTTCACTCCCACGTGGTCCTCAAAGTTGGGTCTGTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR TCA 90 bp | GAGGACAGACCCAACTTTGAGGACCACGTGGGAGTGAACATCTCCACGGCTGGACATCCACTGCTATGTTaGAGTAAGTCTTGGAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: EDRPNFEDHVGVNISTAGHPLLC*SKSWNL Trigger: CAAATTCCAAGACTTACTTCAACATAGCAGTGGATG...TCCAGCCGTGGAGATGTTCACTCCCACGTGGTCCTCAAAGTTGGGTCTGTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR CCA 90 bp | AACTCAACAGGTTCACCAGTAACAGCTGCCTGGGTGCTTTCAGAGGGCAGGGAATCAAAAGCACGTCATTaGACACGTCTCCTTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NSTGSPVTAAWVLSEGRESKARH*TRLLCL Trigger: GAGACAAAGGAGACGTGTCCAATGACGTGCTTTTGA...TTCCCTGCCCTCTGAAAGCACCCAGGCAGCTGTTACTGGTGAACCTGTTGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR CCA 90 bp | AACTCAACAGGTTCACCAGTAACAGCTGCCTGGGTGCTTTCAGAGGGCAGGGAAATCTCACTATGGTGTTaGAGCCTCCTTTGTGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: NSTGSPVTAAWVLSEGREISLWC*SLLCGS Trigger: ACTACCACAAAGGAGGCTCCAACACCATAGTGAGAT...TTCCCTGCCCTCTGAAAGCACCCAGGCAGCTGTTACTGGTGAACCTGTTGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR TCA 90 bp | GGAGGTTCTCTTACTCCATCTGATGCTGTCCTTAGCTGTTCCCTCTGCCAAAGCCTTCACCATGATGCCTaGAAAATGTTCAGTCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGSLTPSDAVLSCSLCQSLHHDA*KMFSHP Trigger: TGGGTGACTGAACATTTTTCAGGCATCATGGTGAAG...GCTTTGGCAGAGGGAACAGCTAAGGACAGCATCAGATGGAGTAAGAGAACCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR GCA 90 bp | CCCACTGAGAGTGGGTTTGGAACAGCTGGCCAGTCTTTCCTGGACAGTTTCTGTGCCCTTCTCATCCACTaGTATGTTGAAGTAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PTESGFGTAGQSFLDSFCALLIH*YVEVSL Trigger: AAGACTTACTTCAACATAGCAGTGGATGAGAAGGGC...ACAGAAACTGTCCAGGAAAGACTGGCCAGCTGTTCCAAACCCACTCTCAGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR TCA 90 bp | CCCACTGAGAGTGGGTTTGGAACAGCTGGCCAGTCTTTCCTGGACAGTTTCTGTAGATTCTGTTTGTGGTaGATGGCGTTCATTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PTESGFGTAGQSFLDSFCRFCLW*MAFICF Trigger: AAAGCAAATGAACGCCATTCACCACAAACAGAATCT...ACAGAAACTGTCCAGGAAAGACTGGCCAGCTGTTCCAAACCCACTCTCAGTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR GCA 90 bp | CTTTCTTTCTGTAAAGGCCAGGCAGTAATGGTTCAGGATTTACAGAGCGGCTCTGCTGTGCTACAAGGATaGTTGAGCCATCCACACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSFCKGQAVMVQDLQSGSAVLQG*LSHPHL Trigger: CAAGTGTGGATGGCTCAAGCATCCTTGTAGCACAGC...AGAGCCGCTCTGTAAATCCTGAACCATTACTGCCTGGCCTTTACAGAAAGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR CCA 90 bp | CCCACTGAGAGTGGGTTTGGAACAGCTGGCCAGTCTTTCCTGGACAGTTTCTGTATGGCAAGAACAGACTaGGACATTCTGAAATCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PTESGFGTAGQSFLDSFCMARTD*DILKSK Trigger: CTTTGATTTCAGAATGTCCCAGTCTGTTCTTGCCAT...ACAGAAACTGTCCAGGAAAGACTGGCCAGCTGTTCCAAACCCACTCTCAGTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR CAA 72 bp | GGATGCGATGGTACAGGAAAAAGAGCTAAGCTGACTTaGGCCTTTGAGCCAATTGCCTTCCCTCATTCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: GCDGTGKRAKLT*AFEPIAFPHSK Trigger: TTTAGAATGAGGGAAGGCAATTGGCTCAAAGGCCAAAGTCAGCTTAGCTCTTTTTCCTGTACCATCGCATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR CAA 72 bp | CTGAAATATTCAGCCCGGACCACGTTCTCTGATACATaGATACATGATACATTGAGGCCAGAGCCAACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKYSARTTFSDT*IHDTLRPEPTL Trigger: CAGAGTTGGCTCTGGCCTCAATGTATCATGTATCAATGTATCAGAGAACGTGGTCCGGGCTGAATATTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR TCA 90 bp | CTTTCTTTCTGTAAAGGCCAGGCAGTAATGGTTCAGGATTTACAGAGCGGCTCTCACGAGTATAAATGCTaGTCTCTCATGTTGTATGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSFCKGQAVMVQDLQSGSHEYKC*SLMLYD Trigger: GTCATACAACATGAGAGATCAGCATTTATACTCGTG...AGAGCCGCTCTGTAAATCCTGAACCATTACTGCCTGGCCTTTACAGAAAGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR CAA 72 bp | GACTGTGCTTCCTCATTTGTCATCTCACCTTGTCATTaGATTATGAGGGTAAAAAGACTTCGAATGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DCASSFVISPCH*IMRVKRLRMSP Trigger: TGGGCTCATTCGAAGTCTTTTTACCCTCATAATCAAATGACAAGGTGAGATGACAAATGAGGAAGCACAGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| 3UTR CAA 72 bp | TTTCAAGGACTGTGCTTCCTCATTTGTCATCTCACCTaGTCATTTGATTATGAGGGTAAAAAGACTTCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FQGLCFLICHLT*SFDYEGKKTSN Trigger: ATTCGAAGTCTTTTTACCCTCATAATCAAATGACAAGGTGAGATGACAAATGAGGAAGCACAGTCCTTGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS GCA 90 bp | CCCCCGCCACTGGCACAGCACGAACACGGTGCCCGCGGCGTTCAGTaGGGACAGCAGCGCTATGGCCACCAGGGCGCCGCGCAGCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PPPLAQHEHGARGVQ*GQQRYGHQGAAQPP Trigger: TGGGGGCTGCGCGGCGCCCTGGTGGCCATAGCGCTGCTGTCCGCACTGAACGCCGCGGGCACCGTGTTCGTGCTGTGCCAGTGGCGGGGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS TCA 90 bp | AGAAAGGCGCGTAGGGCGCTGTCCTCGCGCTGCTCTCGGCCGCGTTaGGCCTCCAGCGCCCGTAGCGCCGCGCTTAACCCCCGCCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: RKARRALSSRCSRPR*ASSARSAALNPRHW Trigger: CCAGTGGCGGGGGTTAAGCGCGGCGCTACGGGCGCTGGAGGCTCAACGCGGCCGAGAGCAGCGCGAGGACAGCGCCCTACGCGCCTTTCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CCA 90 bp | ACGCAGGCTCGCCGTTGTGGCTGCGCTTGTTGCGCGCTGCGCTCATaGGGTCCTGGGATGGTTCGGGGACCCGGCCCGGCGCACGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: TQARRCGCACCALRS*GPGMVRGPGPAHDS Trigger: TGAGTCGTGCGCCGGGCCGGGTCCCCGAACCATCCCAGGACCCCATGAGCGCAGCGCGCAACAAGCGCAGCCACAACGGCGAGCCTGCGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS GCA 90 bp | GTAGCGCCGCGCTTAACCCCCGCCACTGGCACAGCACGAACACGGTaGCCGCGGCGTTCAGTGCGGACAGCAGCGCTATGGCCACCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VAPRLTPATGTARTR*PRRSVRTAALWPPG Trigger: CCCTGGTGGCCATAGCGCTGCTGTCCGCACTGAACGCCGCGGGCACCGTGTTCGTGCTGTGCCAGTGGCGGGGGTTAAGCGCGGCGCTAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS GCA 90 bp | CCGCACGGATGTGTGACGCAGGCTCGCCGTTGTGGCTGCGCTTGTTaGGCGCTGCGCTCATGGGGTCCTGGGATGGTTCGGGGACCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: PHGCVTQARRCGCAC*ALRSWGPGMVRGPG Trigger: GCCGGGTCCCCGAACCATCCCAGGACCCCATGAGCGCAGCGCGCAACAAGCGCAGCCACAACGGCGAGCCTGCGTCACACATCCGTGCGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CCA 90 bp | TCGCCGTTGTGGCTGCGCTTGTTGCGCGCTGCGCTCATGGGGTCCTaGGATGGTTCGGGGACCCGGCCCGGCGCACGACTCAATTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SPLWLRLLRAALMGS*DGSGTRPGARLNSA Trigger: GGCCGAATTGAGTCGTGCGCCGGGCCGGGTCCCCGAACCATCCCAGGACCCCATGAGCGCAGCGCGCAACAAGCGCAGCCACAACGGCGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CCA 90 bp | GTTGTGGCTGCGCTTGTTGCGCGCTGCGCTCATGGGGTCCTGGGATaGTTCGGGGACCCGGCCCGGCGCACGACTCAATTCGGCCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: VVAALVARCAHGVLG*FGDPARRTTQFGQK Trigger: TTTCTGGCCGAATTGAGTCGTGCGCCGGGCCGGGTCCCCGAACCATCCCAGGACCCCATGAGCGCAGCGCGCAACAAGCGCAGCCACAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CCA 90 bp | ATGTCCTGGCTCTCCGCACGGATGTGTGACGCAGGCTCGCCGTTGTaGCTGCGCTTGTTGCGCGCTGCGCTCATGGGGTCCTGGGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: MSWLSARMCDAGSPL*LRLLRAALMGSWDG Trigger: ACCATCCCAGGACCCCATGAGCGCAGCGCGCAACAAGCGCAGCCACAACGGCGAGCCTGCGTCACACATCCGTGCGGAGAGCCAGGACAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR CAA 90 bp | GAGGACAGACCCAACTTTGAGGACCACGTGGGAGTGAACATCTCCACGGCTGGAGACGCAGGCTCGCCGTaGTGGCTGCGCTTGTTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: EDRPNFEDHVGVNISTAGDAGSP*WLRLLR Trigger: GCGCAACAAGCGCAGCCACAACGGCGAGCCTGCGTC...TCCAGCCGTGGAGATGTTCACTCCCACGTGGTCCTCAAAGTTGGGTCTGTCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS TCA 90 bp | GTAGGTCATCATCATCATCATGTCCTGGCTCTCCGCACGGATGTGTaGCGCAGGCTCGCCGTTGTGGCTGCGCTTGTTGCGCGCTGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: VGHHHHHVLALRTDV*RRLAVVAALVARCA Trigger: AGCGCAGCGCGCAACAAGCGCAGCCACAACGGCGAGCCTGCGTCACACATCCGTGCGGAGAGCCAGGACATGATGATGATGATGACCTAC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CCA 90 bp | GGGTATGACACACGTCTCCCCTGGACACTGGCTGTTGAACACGTTTaGTGGCCGAGGGCCTTTGGATCTTCTGCTTCCAGGAGGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GYDTRLPWTLAVEHV*WPRAFGSSASRRAW Trigger: CCAGGCCCTCCTGGAAGCAGAAGATCCAAAGGCCCTCGGCCACCAAACGTGTTCAACAGCCAGTGTCCAGGGGAGACGTGTGTCATACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CCA 90 bp | TATGACACACGTCTCCCCTGGACACTGGCTGTTGAACACGTTTGGTaGCCGAGGGCCTTTGGATCTTCTGCTTCCAGGAGGGCCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: YDTRLPWTLAVEHVW*PRAFGSSASRRAWR Trigger: CCTCCAGGCCCTCCTGGAAGCAGAAGATCCAAAGGCCCTCGGCCACCAAACGTGTTCAACAGCCAGTGTCCAGGGGAGACGTGTGTCATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR CAA 90 bp | AACTCAACAGGTTCACCAGTAACAGCTGCCTGGGTGCTTTCAGAGGGCAGGGAATTGTGGCTGCGCTTGTaGCGCGCTGCGCTCATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: NSTGSPVTAAWVLSEGRELWLRL*RAALMG Trigger: CCCCATGAGCGCAGCGCGCAACAAGCGCAGCCACAA...TTCCCTGCCCTCTGAAAGCACCCAGGCAGCTGTTACTGGTGAACCTGTTGAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR CAA 90 bp | GAGGACAGACCCAACTTTGAGGACCACGTGGGAGTGAACATCTCCACGGCTGGAGGTGGCCGAGGGCCTTaGGATCTTCTGCTTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: EDRPNFEDHVGVNISTAGGGRGP*DLLLPG Trigger: TCCTGGAAGCAGAAGATCCAAAGGCCCTCGGCCACC...TCCAGCCGTGGAGATGTTCACTCCCACGTGGTCCTCAAAGTTGGGTCTGTCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR CAA 90 bp | GGAGGTTCTCTTACTCCATCTGATGCTGTCCTTAGCTGTTCCCTCTGCCAAAGCCCGTTGTGGCTGCGCTaGTTGCGCGCTGCGCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: GGSLTPSDAVLSCSLCQSPLWLR*LRAALM Trigger: CATGAGCGCAGCGCGCAACAAGCGCAGCCACAACGG...GCTTTGGCAGAGGGAACAGCTAAGGACAGCATCAGATGGAGTAAGAGAACCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CCA 90 bp | GAGAGAGTTGTTGTAAACAGCGTGCCCACAGCCGTGGAAATAATGTaGGAGGTGGAGGAGGGTGAAGCTGCTATTGAGGAGCGCCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ERVVVNSVPTAVEIM*EVEEGEAAIEERRQ Trigger: CTGCCGGCGCTCCTCAATAGCAGCTTCACCCTCCTCCACCTCCCACATTATTTCCACGGCTGTGGGCACGCTGTTTACAACAACTCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS GCA 90 bp | AGCACGTCATTGGACACGTCTCCTTTGTCTCCCTTGTCACCTTTCTaGCCTGGTGGGCCCTCATTTCCAGGTAGACCCAGTTCACCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: STSLDTSPLSPLSPF*PGGPSFPGRPSSPA Trigger: TGCTGGTGAACTGGGTCTACCTGGAAATGAGGGCCCACCAGGGCAGAAAGGTGACAAGGGAGACAAAGGAGACGTGTCCAATGACGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR CAA 90 bp | GAGGACAGACCCAACTTTGAGGACCACGTGGGAGTGAACATCTCCACGGCTGGATTGGACACGTCTCCTTaGTCTCCCTTGTCACCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: EDRPNFEDHVGVNISTAGLDTSP*SPLSPF Trigger: GAAAGGTGACAAGGGAGACAAAGGAGACGTGTCCAA...TCCAGCCGTGGAGATGTTCACTCCCACGTGGTCCTCAAAGTTGGGTCTGTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR CAA 90 bp | CCCACTGAGAGTGGGTTTGGAACAGCTGGCCAGTCTTTCCTGGACAGTTTCTGTGGACCTTGGTCACCTTaGGCACCTGTCAAAAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: PTESGFGTAGQSFLDSFCGPWSP*APVKST Trigger: CGTGCTTTTGACAGGTGCCAAAGGTGACCAAGGTCC...ACAGAAACTGTCCAGGAAAGACTGGCCAGCTGTTCCAAACCCACTCTCAGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR CAA 90 bp | GAGGACAGACCCAACTTTGAGGACCACGTGGGAGTGAACATCTCCACGGCTGGAAGGACTTGGGCTGGGTaGCCAATGGAAGTGATCATA | + |
|
Preference number: 5 (lower is better) Translates to: EDRPNFEDHVGVNISTAGRTWAG*PMEVII Trigger: TATGATCACTTCCATTGGCAACCCAGCCCAAGTCCT...TCCAGCCGTGGAGATGTTCACTCCCACGTGGTCCTCAAAGTTGGGTCTGTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR CAA 90 bp | CCCACTGAGAGTGGGTTTGGAACAGCTGGCCAGTCTTTCCTGGACAGTTTCTGTAGCGCCGGCAGGTCTTaGAACTCCTTCACCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: PTESGFGTAGQSFLDSFCSAGRS*NSFTMM Trigger: CATCATGGTGAAGGAGTTCAAAGACCTGCCGGCGCT...ACAGAAACTGTCCAGGAAAGACTGGCCAGCTGTTCCAAACCCACTCTCAGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR CAA 90 bp | GAGGACAGACCCAACTTTGAGGACCACGTGGGAGTGAACATCTCCACGGCTGGATTGCCAGCCTTGGATTaGGGGTATGTGGTGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: EDRPNFEDHVGVNISTAGLPALD*GYVVLM Trigger: CATCAACACCACATACCCCAAATCCAAGGCTGGCAA...TCCAGCCGTGGAGATGTTCACTCCCACGTGGTCCTCAAAGTTGGGTCTGTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR CAA 90 bp | GAGGACAGACCCAACTTTGAGGACCACGTGGGAGTGAACATCTCCACGGCTGGAACCAAGGTATCATCATaGGGTATGACACACGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EDRPNFEDHVGVNISTAGTKVSS*GMTHVS Trigger: GGAGACGTGTGTCATACCCAATGATGATACCTTGGT...TCCAGCCGTGGAGATGTTCACTCCCACGTGGTCCTCAAAGTTGGGTCTGTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR CAA 90 bp | GAGGACAGACCCAACTTTGAGGACCACGTGGGAGTGAACATCTCCACGGCTGGAGTGAATGGCGTTCATTaGCTTTCTCATCAGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EDRPNFEDHVGVNISTAGVNGVH*LSHQLF Trigger: GAAGAGCTGATGAGAAAGCAAATGAACGCCATTCAC...TCCAGCCGTGGAGATGTTCACTCCCACGTGGTCCTCAAAGTTGGGTCTGTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR CAA 90 bp | GGAGGTTCTCTTACTCCATCTGATGCTGTCCTTAGCTGTTCCCTCTGCCAAAGCAAGGCATTGCCAGCCTaGGATTTGGGGTATGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GGSLTPSDAVLSCSLCQSKALPA*DLGYVV Trigger: CACCACATACCCCAAATCCAAGGCTGGCAATGCCTT...GCTTTGGCAGAGGGAACAGCTAAGGACAGCATCAGATGGAGTAAGAGAACCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR CAA 90 bp | CCCACTGAGAGTGGGTTTGGAACAGCTGGCCAGTCTTTCCTGGACAGTTTCTGTGTCAAAAGCACGTCATaGGACACGTCTCCTTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PTESGFGTAGQSFLDSFCVKSTS*DTSPLS Trigger: AGACAAAGGAGACGTGTCCAATGACGTGCTTTTGAC...ACAGAAACTGTCCAGGAAAGACTGGCCAGCTGTTCCAAACCCACTCTCAGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS-3UTR CAA 90 bp | CTTTCTTTCTGTAAAGGCCAGGCAGTAATGGTTCAGGATTTACAGAGCGGCTCTATGCGGTCGTCACTTTaGTTAGCAGACTCTCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: LSFCKGQAVMVQDLQSGSMRSSL*LADSLI Trigger: GATGAGAGAGTCTGCTAACAAAAGTGACGACCGCAT...AGAGCCGCTCTGTAAATCCTGAACCATTACTGCCTGGCCTTTACAGAAAGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CCA 90 bp | GAGTCTGAGGTGTCTCTTTCCCAAATTCAAATCTCACTATGGTGTTaGAGCCTCCTTTGTGGTAGTAGAGAGAGTTGTTGTAAACAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: ESEVSLSQIQISLWC*SLLCGSRESCCKQR Trigger: ACGCTGTTTACAACAACTCTCTCTACTACCACAAAGGAGGCTCCAACACCATAGTGAGATTTGAATTTGGGAAAGAGACACCTCAGACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS GCA 90 bp | GCAAGAACAGACTGGGACATTCTGAAATCAAAGTTTGCATTGATTTaGTTTCCTCCTAACAAATCAAAGGCAAACGTGACCCTCGTATCT | + |
|
Preference number: 5 (lower is better) Translates to: ARTDWDILKSKFALI*FPPNKSKANVTLVS Trigger: AGATACGAGGGTCACGTTTGCCTTTGATTTGTTAGGAGGAAAGCAAATCAATGCAAACTTTGATTTCAGAATGTCCCAGTCTGTTCTTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS TCA 72 bp | CGTAGGGCGCTGTCCTCGCGCTGCTCTCGGCCGCGTTaGGCCTCCAGCGCCCGTAGCGCCGCGCTTAACCCC | + |
|
Preference number: 6 (lower is better) Translates to: RRALSSRCSRPR*ASSARSAALNP Trigger: GGGGTTAAGCGCGGCGCTACGGGCGCTGGAGGCTCAACGCGGCCGAGAGCAGCGCGAGGACAGCGCCCTACG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CCA 72 bp | CGCCGTTGTGGCTGCGCTTGTTGCGCGCTGCGCTCATaGGGTCCTGGGATGGTTCGGGGACCCGGCCCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RRCGCACCALRS*GPGMVRGPGPA Trigger: CGCCGGGCCGGGTCCCCGAACCATCCCAGGACCCCATGAGCGCAGCGCGCAACAAGCGCAGCCACAACGGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CCA 72 bp | TGGCTGCGCTTGTTGCGCGCTGCGCTCATGGGGTCCTaGGATGGTTCGGGGACCCGGCCCGGCGCACGACTC | + |
|
Preference number: 6 (lower is better) Translates to: WLRLLRAALMGS*DGSGTRPGARL Trigger: GAGTCGTGCGCCGGGCCGGGTCCCCGAACCATCCCAGGACCCCATGAGCGCAGCGCGCAACAAGCGCAGCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CAA 90 bp | TCCGCACGGATGTGTGACGCAGGCTCGCCGTTGTGGCTGCGCTTGTaGCGCGCTGCGCTCATGGGGTCCTGGGATGGTTCGGGGACCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SARMCDAGSPLWLRL*RAALMGSWDGSGTR Trigger: CCGGGTCCCCGAACCATCCCAGGACCCCATGAGCGCAGCGCGCAACAAGCGCAGCCACAACGGCGAGCCTGCGTCACACATCCGTGCGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CCA 72 bp | GCGCTTGTTGCGCGCTGCGCTCATGGGGTCCTGGGATaGTTCGGGGACCCGGCCCGGCGCACGACTCAATTC | + |
|
Preference number: 6 (lower is better) Translates to: ALVARCAHGVLG*FGDPARRTTQF Trigger: GAATTGAGTCGTGCGCCGGGCCGGGTCCCCGAACCATCCCAGGACCCCATGAGCGCAGCGCGCAACAAGCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CAA 90 bp | CTCTCCGCACGGATGTGTGACGCAGGCTCGCCGTTGTGGCTGCGCTaGTTGCGCGCTGCGCTCATGGGGTCCTGGGATGGTTCGGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: LSARMCDAGSPLWLR*LRAALMGSWDGSGT Trigger: GGTCCCCGAACCATCCCAGGACCCCATGAGCGCAGCGCGCAACAAGCGCAGCCACAACGGCGAGCCTGCGTCACACATCCGTGCGGAGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS GCA 72 bp | CGCTTAACCCCCGCCACTGGCACAGCACGAACACGGTaGCCGCGGCGTTCAGTGCGGACAGCAGCGCTATGG | + |
|
Preference number: 6 (lower is better) Translates to: RLTPATGTARTR*PRRSVRTAALW Trigger: CCATAGCGCTGCTGTCCGCACTGAACGCCGCGGGCACCGTGTTCGTGCTGTGCCAGTGGCGGGGGTTAAGCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CCA 72 bp | CTCTCCGCACGGATGTGTGACGCAGGCTCGCCGTTGTaGCTGCGCTTGTTGCGCGCTGCGCTCATGGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LSARMCDAGSPL*LRLLRAALMGS Trigger: GGACCCCATGAGCGCAGCGCGCAACAAGCGCAGCCACAACGGCGAGCCTGCGTCACACATCCGTGCGGAGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CAA 72 bp | TGGCTCTCCGCACGGATGTGTGACGCAGGCTCGCCGTaGTGGCTGCGCTTGTTGCGCGCTGCGCTCATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: WLSARMCDAGSP*WLRLLRAALMG Trigger: CCCCATGAGCGCAGCGCGCAACAAGCGCAGCCACAACGGCGAGCCTGCGTCACACATCCGTGCGGAGAGCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS GCA 72 bp | TGTGTGACGCAGGCTCGCCGTTGTGGCTGCGCTTGTTaGGCGCTGCGCTCATGGGGTCCTGGGATGGTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: CVTQARRCGCAC*ALRSWGPGMVR Trigger: CCGAACCATCCCAGGACCCCATGAGCGCAGCGCGCAACAAGCGCAGCCACAACGGCGAGCCTGCGTCACACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CAA 72 bp | CGGATGTGTGACGCAGGCTCGCCGTTGTGGCTGCGCTaGTTGCGCGCTGCGCTCATGGGGTCCTGGGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: RMCDAGSPLWLR*LRAALMGSWDG Trigger: ACCATCCCAGGACCCCATGAGCGCAGCGCGCAACAAGCGCAGCCACAACGGCGAGCCTGCGTCACACATCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CAA 72 bp | ATGTGTGACGCAGGCTCGCCGTTGTGGCTGCGCTTGTaGCGCGCTGCGCTCATGGGGTCCTGGGATGGTTCG | + |
|
Preference number: 6 (lower is better) Translates to: MCDAGSPLWLRL*RAALMGSWDGS Trigger: CGAACCATCCCAGGACCCCATGAGCGCAGCGCGCAACAAGCGCAGCCACAACGGCGAGCCTGCGTCACACAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CAA 90 bp | ATCATGTCCTGGCTCTCCGCACGGATGTGTGACGCAGGCTCGCCGTaGTGGCTGCGCTTGTTGCGCGCTGCGCTCATGGGGTCCTGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: IMSWLSARMCDAGSP*WLRLLRAALMGSWD Trigger: ATCCCAGGACCCCATGAGCGCAGCGCGCAACAAGCGCAGCCACAACGGCGAGCCTGCGTCACACATCCGTGCGGAGAGCCAGGACATGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CAA 72 bp | TTTGGGCCCTGGAGACCAGGCTGTCCATCTGATCCATaGTGGCCTGGTAACCCGCCGGCTCCTGGAGGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: FGPWRPGCPSDP*WPGNPPAPGGP Trigger: AGGACCTCCAGGAGCCGGCGGGTTACCAGGCCACAATGGATCAGATGGACAGCCTGGTCTCCAGGGCCCAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS TCA 72 bp | CATCATCATCATGTCCTGGCTCTCCGCACGGATGTGTaGCGCAGGCTCGCCGTTGTGGCTGCGCTTGTTGCG | + |
|
Preference number: 6 (lower is better) Translates to: HHHHVLALRTDV*RRLAVVAALVA Trigger: CGCAACAAGCGCAGCCACAACGGCGAGCCTGCGTCACACATCCGTGCGGAGAGCCAGGACATGATGATGATG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CAA 72 bp | CACTGGCTGTTGAACACGTTTGGTGGCCGAGGGCCTTaGGATCTTCTGCTTCCAGGAGGGCCTGGAGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: HWLLNTFGGRGP*DLLLPGGPGGP Trigger: AGGGCCTCCAGGCCCTCCTGGAAGCAGAAGATCCAAAGGCCCTCGGCCACCAAACGTGTTCAACAGCCAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CCA 72 bp | CCTGGTGGGCCCGGTGGTCCTGTGAGGCAGATGCCCTaGGTACTGTTGCACAGGTCTATCATCACTCGAATC | + |
|
Preference number: 6 (lower is better) Translates to: PGGPGGPVRQMP*VLLHRSIITRI Trigger: GATTCGAGTGATGATAGACCTGTGCAACAGTACCCAGGGCATCTGCCTCACAGGACCACCGGGCCCACCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CCA 72 bp | CGTCTCCCCTGGACACTGGCTGTTGAACACGTTTGGTaGCCGAGGGCCTTTGGATCTTCTGCTTCCAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RLPWTLAVEHVW*PRAFGSSASRR Trigger: CCTCCTGGAAGCAGAAGATCCAAAGGCCCTCGGCCACCAAACGTGTTCAACAGCCAGTGTCCAGGGGAGACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CCA 72 bp | ACACGTCTCCCCTGGACACTGGCTGTTGAACACGTTTaGTGGCCGAGGGCCTTTGGATCTTCTGCTTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TRLPWTLAVEHV*WPRAFGSSASR Trigger: CCTGGAAGCAGAAGATCCAAAGGCCCTCGGCCACCAAACGTGTTCAACAGCCAGTGTCCAGGGGAGACGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CAA 72 bp | CCCGGTGGTCCTGTGAGGCAGATGCCCTGGGTACTGTaGCACAGGTCTATCATCACTCGAATCGGCACCATG | + |
|
Preference number: 6 (lower is better) Translates to: PGGPVRQMPWVL*HRSIITRIGTM Trigger: CATGGTGCCGATTCGAGTGATGATAGACCTGTGCAACAGTACCCAGGGCATCTGCCTCACAGGACCACCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CCA 72 bp | TCATCATTGGGTATGACACACGTCTCCCCTGGACACTaGCTGTTGAACACGTTTGGTGGCCGAGGGCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSLGMTHVSPGH*LLNTFGGRGPL Trigger: CAAAGGCCCTCGGCCACCAAACGTGTTCAACAGCCAGTGTCCAGGGGAGACGTGTGTCATACCCAATGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CCA 72 bp | CAAGGTATCATCATTGGGTATGACACACGTCTCCCCTaGACACTGGCTGTTGAACACGTTTGGTGGCCGAGG | + |
|
Preference number: 6 (lower is better) Translates to: QGIIIGYDTRLP*TLAVEHVWWPR Trigger: CCTCGGCCACCAAACGTGTTCAACAGCCAGTGTCCAGGGGAGACGTGTGTCATACCCAATGATGATACCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CAA 90 bp | AGGTGGAGGAGGGTGAAGCTGCTATTGAGGAGCGCCGGCAGGTCTTaGAACTCCTTCACCATGATGCCTGAAAAATGTTCAGTCACCCAA | + |
|
Preference number: 6 (lower is better) Translates to: RWRRVKLLLRSAGRS*NSFTMMPEKCSVTQ Trigger: TTGGGTGACTGAACATTTTTCAGGCATCATGGTGAAGGAGTTCAAAGACCTGCCGGCGCTCCTCAATAGCAGCTTCACCCTCCTCCACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS GCA 72 bp | TTGCCAGCCTTGGATTTGGGGTATGTGGTGTTGATGTaGTGTGTCACGGAGAATGTCCTCTCATCCAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LPALDLGYVVLM*CVTENVLSSSC Trigger: ACAGCTGGATGAGAGGACATTCTCCGTGACACAGCACATCAACACCACATACCCCAAATCCAAGGCTGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CAA 72 bp | CCTTGGTCACCTTTGGCACCTGTCAAAAGCACGTCATaGGACACGTCTCCTTTGTCTCCCTTGTCACCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PWSPLAPVKSTS*DTSPLSPLSPF Trigger: GAAAGGTGACAAGGGAGACAAAGGAGACGTGTCCAATGACGTGCTTTTGACAGGTGCCAAAGGTGACCAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CAA 90 bp | CGTTCATTTGCTTTCTCATCAGCTCTTCCCACCAAGGTATCATCATaGGGTATGACACACGTCTCCCCTGGACACTGGCTGTTGAACACG | + |
|
Preference number: 6 (lower is better) Translates to: RSFAFSSALPTKVSS*GMTHVSPGHWLLNT Trigger: CGTGTTCAACAGCCAGTGTCCAGGGGAGACGTGTGTCATACCCAATGATGATACCTTGGTGGGAAGAGCTGATGAGAAAGCAAATGAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CCA 72 bp | CTTGGTCACCTTTGGCACCTGTCAAAAGCACGTCATTaGACACGTCTCCTTTGTCTCCCTTGTCACCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LGHLWHLSKARH*TRLLCLPCHLS Trigger: AGAAAGGTGACAAGGGAGACAAAGGAGACGTGTCCAATGACGTGCTTTTGACAGGTGCCAAAGGTGACCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CAA 72 bp | AGGGTGAAGCTGCTATTGAGGAGCGCCGGCAGGTCTTaGAACTCCTTCACCATGATGCCTGAAAAATGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RVKLLLRSAGRS*NSFTMMPEKCS Trigger: TGAACATTTTTCAGGCATCATGGTGAAGGAGTTCAAAGACCTGCCGGCGCTCCTCAATAGCAGCTTCACCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CAA 90 bp | ATCCAAGTCCCAAAAGTCTCTCTCACTTTTAGGACTTGGGCTGGGTaGCCAATGGAAGTGATCATAGATTCTGTTTGTGGTGAATGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: IQVPKVSLTFRTWAG*PMEVIIDSVCGEWR Trigger: ACGCCATTCACCACAAACAGAATCTATGATCACTTCCATTGGCAACCCAGCCCAAGTCCTAAAAGTGAGAGAGACTTTTGGGACTTGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CAA 90 bp | ATGATGCCTGAAAAATGTTCAGTCACCCAAATGCGGTCGTCACTTTaGTTAGCAGACTCTCTCATCCAAGTCCCAAAAGTCTCTCTCACT | + |
|
Preference number: 6 (lower is better) Translates to: MMPEKCSVTQMRSSL*LADSLIQVPKVSLT Trigger: AGTGAGAGAGACTTTTGGGACTTGGATGAGAGAGTCTGCTAACAAAAGTGACGACCGCATTTGGGTGACTGAACATTTTTCAGGCATCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS TCA 72 bp | AGCATCAGATGGCCATCTTCCCACGAGTATAAATGCTaGTCTCTCATGTTGTATGACAGCATGGCAAGAACA | + |
|
Preference number: 6 (lower is better) Translates to: SIRWPSSHEYKC*SLMLYDSMART Trigger: TGTTCTTGCCATGCTGTCATACAACATGAGAGATCAGCATTTATACTCGTGGGAAGATGGCCATCTGATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CCA 72 bp | TCTGAGGTGTCTCTTTCCCAAATTCAAATCTCACTATaGTGTTGGAGCCTCCTTTGTGGTAGTAGAGAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: SEVSLSQIQISL*CWSLLCGSRES Trigger: ACTCTCTCTACTACCACAAAGGAGGCTCCAACACCATAGTGAGATTTGAATTTGGGAAAGAGACACCTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CAA 72 bp | GAAAAATGTTCAGTCACCCAAATGCGGTCGTCACTTTaGTTAGCAGACTCTCTCATCCAAGTCCCAAAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: EKCSVTQMRSSL*LADSLIQVPKV Trigger: GACTTTTGGGACTTGGATGAGAGAGTCTGCTAACAAAAGTGACGACCGCATTTGGGTGACTGAACATTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||
| CDS CCA 72 bp | GTGTCTCTTTCCCAAATTCAAATCTCACTATGGTGTTaGAGCCTCCTTTGTGGTAGTAGAGAGAGTTGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: VSLSQIQISLWC*SLLCGSRESCC Trigger: ACAACAACTCTCTCTACTACCACAAAGGAGGCTCCAACACCATAGTGAGATTTGAATTTGGGAAAGAGACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056740.6 |
||