Pregenerated sensors for GLDC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024827Ensembl transcript IDs: ENSMUST00000025778.9
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGTGTGAGCCACGTAAAGGAGAAGAAATATCCTTGCTTGTCAAATaGTCCAGCAAGAGACATCGGGTCAGCCCTTTGAACGTAGGAGGG | + |
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Preference number: 1 (lower is better) Translates to: MCEPRKGEEISLLVK*SSKRHRVSPLNVGG Trigger: CCCTCCTACGTTCAAAGGGCTGACCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATATTTCTTCTCCTTTACGTGGCTCACACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| 3UTR CAA 90 bp | CAAACTAAATGGCTCCCAATCAAGGCAACACGAACAGCCACTGCCTaGCCGTACAGCAGGTGGCCGCCACTCACCATGCTAATTGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: QTKWLPIKATRTATA*PYSRWPPLTMLIVL Trigger: AAGCACAATTAGCATGGTGAGTGGCGGCCACCTGCTGTACGGCAAGGCAGTGGCTGTTCGTGTTGCCTTGATTGGGAGCCATTTAGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| 3UTR CCA 72 bp | GCAACACGAACAGCCACTGCCTTGCCGTACAGCAGGTaGCCGCCACTCACCATGCTAATTGTGCTTACATTA | + |
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Preference number: 3 (lower is better) Translates to: ATRTATALPYSR*PPLTMLIVLTL Trigger: TAATGTAAGCACAATTAGCATGGTGAGTGGCGGCCACCTGCTGTACGGCAAGGCAGTGGCTGTTCGTGTTGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| 3UTR CCA 72 bp | CTAGCGCACCCCACATTTTCTATCCGGCAAACTAAATaGCTCCCAATCAAGGCAACACGAACAGCCACTGCC | + |
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Preference number: 3 (lower is better) Translates to: LAHPTFSIRQTK*LPIKATRTATA Trigger: GGCAGTGGCTGTTCGTGTTGCCTTGATTGGGAGCCATTTAGTTTGCCGGATAGAAAATGTGGGGTGCGCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| 3UTR GCA 72 bp | TCATGTGTGAGCCACGTAAAGGAGAAGAAATATCCTTaGTTGTCAAATGCTCCAGCAAGAGACATCGGGTCA | + |
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Preference number: 3 (lower is better) Translates to: SCVSHVKEKKYP*LSNAPARDIGS Trigger: TGACCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATATTTCTTCTCCTTTACGTGGCTCACACATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| 3UTR TCA 72 bp | AAAAGTCCGCACAGTGAAAGGAGGACACTTATGCTGTaGCAGATCAGGCACATTAGTGAGGAGAATTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: KSPHSERRTLML*QIRHISEENSS Trigger: TGAAGAATTCTCCTCACTAATGTGCCTGATCTGTCACAGCATAAGTGTCCTCCTTTCACTGTGCGGACTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| 3UTR-3UTR CAA 90 bp | TGCTGTGACAGATCAGGCACATTAGTGAGGAGAATTCTTCAGTGTATAAAATGTAAGAAATATCCTTGCTaGTCAAATGCTCCAGCAAGA | + |
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Preference number: 3 (lower is better) Translates to: CCDRSGTLVRRILQCIKCKKYPC*SNAPAR Trigger: TCTTGCTGGAGCATTTGACAAGCAAGGATATTTCTT...ACATTTTATACACTGAAGAATTCTCCTCACTAATGTGCCTGATCTGTCACAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR TCA 90 bp | ACATTTTCTATCCGGCAAACTAAATGGCTCCCAATCAAGGCAACACGAACAGCCCCCACGGGGCTGCACTaGCAGTGCCCACGGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: TFSIRQTKWLPIKATRTAPTGLH*QCPRAR Trigger: CCTGGCCCGTGGGCACTGTCAGTGCAGCCCCGTGGG...GGCTGTTCGTGTTGCCTTGATTGGGAGCCATTTAGTTTGCCGGATAGAAAATGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR GCA 90 bp | ATATCCTTGCTTGTCAAATGCTCCAGCAAGAGACATCGGGTCAGCCCTTTGAACCAGGCGCAGCCCCCATaGCCTGGCACACAGCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: ISLLVKCSSKRHRVSPLNQAQPP*PGTQLH Trigger: ATGCAGCTGTGTGCCAGGGCATGGGGGCTGCGCCTG...GTTCAAAGGGCTGACCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR GCA 90 bp | GTAAAGGAGAAGAAATATCCTTGCTTGTCAAATGCTCCAGCAAGAGACATCGGGCCGGCGTACTCCCCCTaGGCTCCGCTGTTTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: VKEKKYPCLSNAPARDIGPAYSP*APLFGW Trigger: CCAGCCAAACAGCGGAGCGCAGGGGGAGTACGCCGG...CCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATATTTCTTCTCCTTTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CCA 90 bp | CAGCAGGTGGCCGCCACTCACCATGCTAATTGTGCTTACATTACCTTGAAAGATCGGCAGATTCCCACCTaGGCATTCATGTTCGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: QQVAATHHANCAYITLKDRQIPT*AFMFAP Trigger: CGGGGCGAACATGAATGCCCAGGTGGGAATCTGCCG...ATCTTTCAAGGTAATGTAAGCACAATTAGCATGGTGAGTGGCGGCCACCTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CCA 90 bp | GTAAAGGAGAAGAAATATCCTTGCTTGTCAAATGCTCCAGCAAGAGACATCGGGTGGGCAGGATGGAGCTaGAACCCCACGGGGCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: VKEKKYPCLSNAPARDIGWAGWS*NPTGLH Trigger: GTGCAGCCCCGTGGGGTTCCAGCTCCATCCTGCCCA...CCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATATTTCTTCTCCTTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR TCA 90 bp | CAGCAGGTGGCCGCCACTCACCATGCTAATTGTGCTTACATTACCTTGAAAGATACCATGGCCTTGAGGTaGGCCACATCGATGTTCCCG | + |
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Preference number: 4 (lower is better) Translates to: QQVAATHHANCAYITLKDTMALR*ATSMFP Trigger: CGGGAACATCGATGTGGCTCACCTCAAGGCCATGGT...ATCTTTCAAGGTAATGTAAGCACAATTAGCATGGTGAGTGGCGGCCACCTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR TCA 90 bp | GAGAAGAAATATCCTTGCTTGTCAAATGCTCCAGCAAGAGACATCGGGTCAGCCTGGGCAGAAAGGGGCTaGGGTGCTTCTTCACTCCGA | + |
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Preference number: 4 (lower is better) Translates to: EKKYPCLSNAPARDIGSAWAERG*GASSLR Trigger: TCGGAGTGAAGAAGCACCTCAGCCCCTTTCTGCCCA...GGCTGACCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATATTTCTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CCA 90 bp | ATATCCTTGCTTGTCAAATGCTCCAGCAAGAGACATCGGGTCAGCCCTTTGAACACTCATAGACCTCCATaGGCGGGCAGGTGCAGACCA | + |
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Preference number: 4 (lower is better) Translates to: ISLLVKCSSKRHRVSPLNTHRPP*AGRCRP Trigger: TGGTCTGCACCTGCCCGCCCATGGAGGTCTATGAGT...GTTCAAAGGGCTGACCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR TCA 90 bp | CTAGCGCACCCCACATTTTCTATCCGGCAAACTAAATGGCTCCCAATCAAGGCAACGGAGTGTACTGGGTaGCCCATCCAGAATTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LAHPTFSIRQTKWLPIKATECTG*PIQNSP Trigger: TGGAGAATTCTGGATGGGTCACCCAGTACACTCCGT...TGCCTTGATTGGGAGCCATTTAGTTTGCCGGATAGAAAATGTGGGGTGCGCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR TCA 90 bp | CTAGCGCACCCCACATTTTCTATCCGGCAAACTAAATGGCTCCCAATCAAGGCACAAATTCTCTCCAGGTaGTGGGTGCAAGTTCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: LAHPTFSIRQTKWLPIKAQILSR*WVQVRR Trigger: CCTCCGAACTTGCACCCATCACCTGGAGAGAATTTG...TGCCTTGATTGGGAGCCATTTAGTTTGCCGGATAGAAAATGTGGGGTGCGCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR GCA 90 bp | AGAAGAAATATCCTTGCTTGTCAAATGCTCCAGCAAGAGACATCGGGTCAGCCCGAGCCGTGCAGATGTTaGTGGTGGCTTTGTCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: RRNILACQMLQQETSGQPEPCRC*WWLCLS Trigger: GGAGAGACAAAGCCACCAGCAACATCTGCACGGCTC...GGGCTGACCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATATTTCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR GCA 90 bp | GAGAAGAAATATCCTTGCTTGTCAAATGCTCCAGCAAGAGACATCGGGTCAGCCGATTTGCCTCTGAGCTaGTCTGCCCAGCACCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: EKKYPCLSNAPARDIGSADLPLS*SAQHLL Trigger: AAGGAGGTGCTGGGCAGAGCAGCTCAGAGGCAAATC...GGCTGACCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATATTTCTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CCA 90 bp | AGAAGAAATATCCTTGCTTGTCAAATGCTCCAGCAAGAGACATCGGGTCAGCCCCCGTGCAGATGTTGCTaGTGGCTTTGTCTCTCCGGA | + |
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Preference number: 4 (lower is better) Translates to: RRNILACQMLQQETSGQPPCRCC*WLCLSG Trigger: TCCGGAGAGACAAAGCCACCAGCAACATCTGCACGG...GGGCTGACCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATATTTCTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CCA 90 bp | AATATCCTTGCTTGTCAAATGCTCCAGCAAGAGACATCGGGTCAGCCCTTTGAAATGAAATGGGCAGGATaGAGCTGGAACCCCACGGGG | + |
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Preference number: 4 (lower is better) Translates to: NILACQMLQQETSGQPFEMKWAG*SWNPTG Trigger: CCCCGTGGGGTTCCAGCTCCATCCTGCCCATTTCAT...TTCAAAGGGCTGACCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR TCA 90 bp | ACATTTTCTATCCGGCAAACTAAATGGCTCCCAATCAAGGCAACACGAACAGCCAAGTTGATTTGCCTCTaGGCTGCTCTGCCCAGCACC | + |
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Preference number: 4 (lower is better) Translates to: TFSIRQTKWLPIKATRTAKLICL*AALPST Trigger: GGTGCTGGGCAGAGCAGCTCAGAGGCAAATCAACTT...GGCTGTTCGTGTTGCCTTGATTGGGAGCCATTTAGTTTGCCGGATAGAAAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR TCA 90 bp | GTAAAGGAGAAGAAATATCCTTGCTTGTCAAATGCTCCAGCAAGAGACATCGGGGGTCCACCATGGCCTTaGGGTGAGCCACATCGATGT | + |
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Preference number: 4 (lower is better) Translates to: VKEKKYPCLSNAPARDIGGPPWP*GEPHRC Trigger: ACATCGATGTGGCTCACCTCAAGGCCATGGTGGACC...CCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATATTTCTTCTCCTTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR TCA 90 bp | GAGAAGAAATATCCTTGCTTGTCAAATGCTCCAGCAAGAGACATCGGGTCAGCCCTCTGCCTTGTCTTCTaGCTCGGTGGGCTCAATCAT | + |
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Preference number: 4 (lower is better) Translates to: EKKYPCLSNAPARDIGSALCLVF*LGGLNH Trigger: ATGATTGAGCCCACCGAGTCAGAAGACAAGGCAGAG...GGCTGACCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATATTTCTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR TCA 90 bp | GTAAAGGAGAAGAAATATCCTTGCTTGTCAAATGCTCCAGCAAGAGACATCGGGCCCAGCAGGAGGATGTaGCACAGGTCAAGGAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: VKEKKYPCLSNAPARDIGPSRRM*HRSRSV Trigger: CACACTCCTTGACCTGTGTCACATCCTCCTGCTGGG...CCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATATTTCTTCTCCTTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR GCA 90 bp | GTAAAGGAGAAGAAATATCCTTGCTTGTCAAATGCTCCAGCAAGAGACATCGGGCAGGCTGGATCTTCATaGCCGCCATGTGAGCGCTTG | + |
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Preference number: 4 (lower is better) Translates to: VKEKKYPCLSNAPARDIGQAGSS*PPCERL Trigger: CAAGCGCTCACATGGCGGGCATGAAGATCCAGCCTG...CCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATATTTCTTCTCCTTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CCA 90 bp | GAGCCACGTAAAGGAGAAGAAATATCCTTGCTTGTCAAATGCTCCAGCAAGAGACCCCTGGGACACCTCTaGCTGATACGGAGTGTACTG | + |
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Preference number: 4 (lower is better) Translates to: EPRKGEEISLLVKCSSKRPLGHL*LIRSVL Trigger: CAGTACACTCCGTATCAGCCAGAGGTGTCCCAGGGG...TCTCTTGCTGGAGCATTTGACAAGCAAGGATATTTCTTCTCCTTTACGTGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CCA 90 bp | CTAGCGCACCCCACATTTTCTATCCGGCAAACTAAATGGCTCCCAATCAAGGCATGTTGTTCTCTGGTCTaGAGAGCGAGGCGATACACT | + |
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Preference number: 4 (lower is better) Translates to: LAHPTFSIRQTKWLPIKACCSLV*RARRYT Trigger: AGTGTATCGCCTCGCTCTCCAGACCAGAGAACAACA...TGCCTTGATTGGGAGCCATTTAGTTTGCCGGATAGAAAATGTGGGGTGCGCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CCA 90 bp | ATATCCTTGCTTGTCAAATGCTCCAGCAAGAGACATCGGGTCAGCCCTTTGAACGGATGTGTTGTTCTCTaGTCTGGAGAGCGAGGCGAT | + |
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Preference number: 4 (lower is better) Translates to: ISLLVKCSSKRHRVSPLNGCVVL*SGERGD Trigger: ATCGCCTCGCTCTCCAGACCAGAGAACAACACATCC...GTTCAAAGGGCTGACCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR TCA 90 bp | ATGTGTGAGCCACGTAAAGGAGAAGAAATATCCTTGCTTGTCAAATGCTCCAGCGCTGTTTGGCTGGAATaGGACTCGGTCGTAGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: MCEPRKGEEISLLVKCSSAVWLE*DSVVAC Trigger: ACAGGCTACGACCGAGTCTCATTCCAGCCAAACAGC...GCTGGAGCATTTGACAAGCAAGGATATTTCTTCTCCTTTACGTGGCTCACACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CCA 90 bp | ATATCCTTGCTTGTCAAATGCTCCAGCAAGAGACATCGGGTCAGCCCTTTGAACGGGATCCATGGTAAATaGCGAACATGGCAGCCATGT | + |
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Preference number: 4 (lower is better) Translates to: ISLLVKCSSKRHRVSPLNGIHGK*RTWQPC Trigger: ACATGGCTGCCATGTTCGCCATTTACCATGGATCCC...GTTCAAAGGGCTGACCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CCA 90 bp | GAGCCACGTAAAGGAGAAGAAATATCCTTGCTTGTCAAATGCTCCAGCAAGAGAGGTGCAGGATCCCAGTaGGATCATGCTGTGAACGAG | + |
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Preference number: 4 (lower is better) Translates to: EPRKGEEISLLVKCSSKRGAGSQ*DHAVNE Trigger: CTCGTTCACAGCATGATCCCACTGGGATCCTGCACC...TCTCTTGCTGGAGCATTTGACAAGCAAGGATATTTCTTCTCCTTTACGTGGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CCA 90 bp | AGAAGAAATATCCTTGCTTGTCAAATGCTCCAGCAAGAGACATCGGGTCAGCCCTCCTTCTCCAGCCCTTaGAAAAGCTGTTGGTATCCC | + |
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Preference number: 4 (lower is better) Translates to: RRNILACQMLQQETSGQPSFSSP*KSCWYP Trigger: GGGATACCAACAGCTTTTCCAAGGGCTGGAGAAGGA...GGGCTGACCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATATTTCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR TCA 90 bp | ATGTGTGAGCCACGTAAAGGAGAAGAAATATCCTTGCTTGTCAAATGCTCCAGCGGTGTCCTGCTCGCTTaGGCCCTTCAGACAAAATCA | + |
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Preference number: 4 (lower is better) Translates to: MCEPRKGEEISLLVKCSSGVLLA*ALQTKS Trigger: TGATTTTGTCTGAAGGGCTCAAGCGAGCAGGACACC...GCTGGAGCATTTGACAAGCAAGGATATTTCTTCTCCTTTACGTGGCTCACACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR GCA 90 bp | ACATTTTCTATCCGGCAAACTAAATGGCTCCCAATCAAGGCAACACGAACAGCCACCCTTTTAGCAATGTaGTTCAGCCCCTGGGATCCA | + |
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Preference number: 4 (lower is better) Translates to: TFSIRQTKWLPIKATRTATLLAM*FSPWDP Trigger: TGGATCCCAGGGGCTGAAGCACATTGCTAAAAGGGT...GGCTGTTCGTGTTGCCTTGATTGGGAGCCATTTAGTTTGCCGGATAGAAAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CCA 90 bp | GTAAAGGAGAAGAAATATCCTTGCTTGTCAAATGCTCCAGCAAGAGACATCGGGAAGAACAGGTCATGCTaGAGTTGGTGTCCTGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: VKEKKYPCLSNAPARDIGKNRSC*SWCPAR Trigger: GCGAGCAGGACACCAACTCCAGCATGACCTGTTCTT...CCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATATTTCTTCTCCTTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CCA 90 bp | ATGTGTGAGCCACGTAAAGGAGAAGAAATATCCTTGCTTGTCAAATGCTCCAGCCCTTGGAAAAGCTGTTaGTATCCCTGGGCTTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: MCEPRKGEEISLLVKCSSPWKSC*YPWAWS Trigger: GGACCAAGCCCAGGGATACCAACAGCTTTTCCAAGG...GCTGGAGCATTTGACAAGCAAGGATATTTCTTCTCCTTTACGTGGCTCACACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CCA 90 bp | ACATTTTCTATCCGGCAAACTAAATGGCTCCCAATCAAGGCAACACGAACAGCCTGTAAGCCCATGAAATaGGCAGGATGGAGCTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: TFSIRQTKWLPIKATRTACKPMK*AGWSWN Trigger: GTTCCAGCTCCATCCTGCCCATTTCATGGGCTTACA...GGCTGTTCGTGTTGCCTTGATTGGGAGCCATTTAGTTTGCCGGATAGAAAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CCA 90 bp | AATATCCTTGCTTGTCAAATGCTCCAGCAAGAGACATCGGGTCAGCCCTTTGAAAATCCTGGAGCCTCTTaGCAACATCCACAGCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: NILACQMLQQETSGQPFENPGAS*QHPQPQ Trigger: TTGAGGCTGTGGATGTTGCCAAGAGGCTCCAGGATT...TTCAAAGGGCTGACCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR TCA 90 bp | GTAAAGGAGAAGAAATATCCTTGCTTGTCAAATGCTCCAGCAAGAGACATCGGGTTTCTGTGGCTTCTTTaGGGCCCTTTCCACCCATCA | + |
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Preference number: 4 (lower is better) Translates to: VKEKKYPCLSNAPARDIGFLWLL*GPFHPS Trigger: TGATGGGTGGAAAGGGCCTCAAAGAAGCCACAGAAA...CCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATATTTCTTCTCCTTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR GCA 90 bp | AATATCCTTGCTTGTCAAATGCTCCAGCAAGAGACATCGGGTCAGCCCTTTGAATCAAAGAACAGGTCATaGTGGAGTTGGTGTCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: NILACQMLQQETSGQPFESKNRS*WSWCPA Trigger: AGCAGGACACCAACTCCAGCATGACCTGTTCTTTGA...TTCAAAGGGCTGACCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR GCA 90 bp | ATGTGTGAGCCACGTAAAGGAGAAGAAATATCCTTGCTTGTCAAATGCTCCAGCTCCGCTCCTCTCCCATaGCTTCAGCAACTAATTCTG | + |
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Preference number: 4 (lower is better) Translates to: MCEPRKGEEISLLVKCSSSAPLP*LQQLIL Trigger: CAGAATTAGTTGCTGAAGGCATGGGAGAGGAGCGGA...GCTGGAGCATTTGACAAGCAAGGATATTTCTTCTCCTTTACGTGGCTCACACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CCA 90 bp | CCACATTTTCTATCCGGCAAACTAAATGGCTCCCAATCAAGGCAACACGAACAGTCCAAACTCTCCAGGTaGCCTCAAAATACACAGAGC | + |
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Preference number: 4 (lower is better) Translates to: PHFLSGKLNGSQSRQHEQSKLSR*PQNTQS Trigger: GCTCTGTGTATTTTGAGGCCACCTGGAGAGTTTGGA...CTGTTCGTGTTGCCTTGATTGGGAGCCATTTAGTTTGCCGGATAGAAAATGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CCA 90 bp | GAGAAGAAATATCCTTGCTTGTCAAATGCTCCAGCAAGAGACATCGGGTCAGCCGGTAAATGGCGAACATaGCAGCCATGTTGGCTAAAA | + |
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Preference number: 4 (lower is better) Translates to: EKKYPCLSNAPARDIGSAGKWRT*QPCWLK Trigger: TTTTAGCCAACATGGCTGCCATGTTCGCCATTTACC...GGCTGACCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATATTTCTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CCA 90 bp | TGCTGTGACAGATCAGGCACATTAGTGAGGAGAATTCTTCAGTGTATAAAATGTAGCTGTTGGTATCCCTaGGCTTGGTCCAGCGGCACA | + |
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Preference number: 4 (lower is better) Translates to: CCDRSGTLVRRILQCIKCSCWYP*AWSSGT Trigger: TGTGCCGCTGGACCAAGCCCAGGGATACCAACAGCT...ACATTTTATACACTGAAGAATTCTCCTCACTAATGTGCCTGATCTGTCACAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR TCA 90 bp | GTAAAGGAGAAGAAATATCCTTGCTTGTCAAATGCTCCAGCAAGAGACATCGGGTCACCAGGTTTTCTTTaGCAGCAAAGAAGGCCGCAT | + |
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Preference number: 4 (lower is better) Translates to: VKEKKYPCLSNAPARDIGSPGFL*QQRRPH Trigger: ATGCGGCCTTCTTTGCTGTCAAAGAAAACCTGGTGA...CCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATATTTCTTCTCCTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR TCA 90 bp | AATATCCTTGCTTGTCAAATGCTCCAGCAAGAGACATCGGGTCAGCCCTTTGAAATTCGTTCCATGTGCTaGCTTAGGAATGAGACAGAC | + |
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Preference number: 4 (lower is better) Translates to: NILACQMLQQETSGQPFEIRSMC*LRNETD Trigger: GTCTGTCTCATTCCTAAGTCAGCACATGGAACGAAT...TTCAAAGGGCTGACCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR TCA 90 bp | ATGTGTGAGCCACGTAAAGGAGAAGAAATATCCTTGCTTGTCAAATGCTCCAGCCTTAATGTAAGCCCATaGAATGGGCAGGATGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: MCEPRKGEEISLLVKCSSLNVSP*NGQDGA Trigger: AGCTCCATCCTGCCCATTTCATGGGCTTACATTAAG...GCTGGAGCATTTGACAAGCAAGGATATTTCTTCTCCTTTACGTGGCTCACACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CCA 90 bp | ACATTTTCTATCCGGCAAACTAAATGGCTCCCAATCAAGGCAACACGAACAGCCTTTCACAAAGGGCAGTaGAAATGCTGCTACCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: TFSIRQTKWLPIKATRTAFHKGQ*KCCYLS Trigger: AGAGAGGTAGCAGCATTTCCACTGCCCTTTGTGAAA...GGCTGTTCGTGTTGCCTTGATTGGGAGCCATTTAGTTTGCCGGATAGAAAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR TCA 90 bp | ATATCCTTGCTTGTCAAATGCTCCAGCAAGAGACATCGGGTCAGCCCTTTGAACCCAGATCTTTCTCAGTaGCTGTTTCATCCAAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: ISLLVKCSSKRHRVSPLNPDLSQ*LFHPKK Trigger: TTTCTTTGGATGAAACAGTCACTGAGAAAGATCTGG...GTTCAAAGGGCTGACCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR TCA 90 bp | CAGCAGGTGGCCGCCACTCACCATGCTAATTGTGCTTACATTACCTTGAAAGATGACAAGATTAGTTTCTaGGTGATAGCTGTTGAACAC | + |
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Preference number: 4 (lower is better) Translates to: QQVAATHHANCAYITLKDDKISF*VIAVEH Trigger: GTGTTCAACAGCTATCACTCAGAAACTAATCTTGTC...ATCTTTCAAGGTAATGTAAGCACAATTAGCATGGTGAGTGGCGGCCACCTGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR GCA 90 bp | CCACATTTTCTATCCGGCAAACTAAATGGCTCCCAATCAAGGCAACACGAACAGAGTTGTAATAGCCCATaGCAATATACGACCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: PHFLSGKLNGSQSRQHEQSCNSP*QYTTSR Trigger: TCTGGAGGTCGTATATTGGCATGGGCTATTACAACT...CTGTTCGTGTTGCCTTGATTGGGAGCCATTTAGTTTGCCGGATAGAAAATGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CCA 90 bp | ACATTTTCTATCCGGCAAACTAAATGGCTCCCAATCAAGGCAACACGAACAGCCTACACCATTGGTAGATaGATACGTGATCATGATGGC | + |
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Preference number: 4 (lower is better) Translates to: TFSIRQTKWLPIKATRTAYTIGR*IRDHDG Trigger: GCCATCATGATCACGTATCCATCTACCAATGGTGTA...GGCTGTTCGTGTTGCCTTGATTGGGAGCCATTTAGTTTGCCGGATAGAAAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CCA 90 bp | CAGCAGGTGGCCGCCACTCACCATGCTAATTGTGCTTACATTACCTTGAAAGATGTTTGGCCATGTAGTTaGCATTTAGAATGGCGATTT | + |
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Preference number: 4 (lower is better) Translates to: QQVAATHHANCAYITLKDVWPCS*HLEWRF Trigger: AAATCGCCATTCTAAATGCCAACTACATGGCCAAAC...ATCTTTCAAGGTAATGTAAGCACAATTAGCATGGTGAGTGGCGGCCACCTGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR TCA 90 bp | TGCTGTGACAGATCAGGCACATTAGTGAGGAGAATTCTTCAGTGTATAAAATGTCGAAGAGTCGAAAGTTaGTTTGCCTCTGAGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: CCDRSGTLVRRILQCIKCRRVES*FASELL Trigger: GAGCAGCTCAGAGGCAAATCAACTTTCGACTCTTCG...ACATTTTATACACTGAAGAATTCTCCTCACTAATGTGCCTGATCTGTCACAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR GCA 90 bp | GAGCCACGTAAAGGAGAAGAAATATCCTTGCTTGTCAAATGCTCCAGCAAGAGATTTCATCCAAAGAAATaGCAAGTGTGCCGTCATCGA | + |
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Preference number: 4 (lower is better) Translates to: EPRKGEEISLLVKCSSKRFHPKK*QVCRHR Trigger: TCGATGACGGCACACTTGGCATTTCTTTGGATGAAA...TCTCTTGCTGGAGCATTTGACAAGCAAGGATATTTCTTCTCCTTTACGTGGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CCA 90 bp | GAGCCACGTAAAGGAGAAGAAATATCCTTGCTTGTCAAATGCTCCAGCAAGAGAAGTTGGCATTTAGAATaGCGATTTCTGTGGCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: EPRKGEEISLLVKCSSKRSWHLE*RFLWLL Trigger: AAGAAGCCACAGAAATCGCCATTCTAAATGCCAACT...TCTCTTGCTGGAGCATTTGACAAGCAAGGATATTTCTTCTCCTTTACGTGGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR TCA 90 bp | GTAAAGGAGAAGAAATATCCTTGCTTGTCAAATGCTCCAGCAAGAGACATCGGGATCAAAGTAGCATTATaGACCCTTTTAGCAATGTGC | + |
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Preference number: 4 (lower is better) Translates to: VKEKKYPCLSNAPARDIGIKVAL*TLLAMC Trigger: GCACATTGCTAAAAGGGTTCATAATGCTACTTTGAT...CCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATATTTCTTCTCCTTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS GCA 90 bp | CAGCCGCGCCGCGGTCCCCGCCACCGCCACCGCCACCGCCGCCGCTaGTGTCCCGGCTTCGCTGCGCCCAACTCAAGCCGGTGCCCCGAG | + |
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Preference number: 5 (lower is better) Translates to: QPRRGPRHRHRHRRR*CPGFAAPNSSRCPE Trigger: CTCGGGGCACCGGCTTGAGTTGGGCGCAGCGAAGCCGGGACAGCAGCGGCGGCGGTGGCGGTGGCGGTGGCGGGGACCGCGGCGCGGCTG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS TCA 90 bp | CCCATGAAATGGGCAGGATGGAGCTGGAACCCCACGGGGCTGCACTaGCAGTGCCCACGGGCCAGGTGCCTTCAGTTGGCTTTATGGAAA | + |
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Preference number: 5 (lower is better) Translates to: PMKWAGWSWNPTGLH*QCPRARCLQLALWK Trigger: TTTCCATAAAGCCAACTGAAGGCACCTGGCCCGTGGGCACTGTCAGTGCAGCCCCGTGGGGTTCCAGCTCCATCCTGCCCATTTCATGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CAA 90 bp | AGAAGAAATATCCTTGCTTGTCAAATGCTCCAGCAAGAGACATCGGGTCAGCCCGCGGCCAGGTTCTCCTaGTGTTGGTCCACCATGGCC | + |
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Preference number: 5 (lower is better) Translates to: RRNILACQMLQQETSGQPAARFS*CWSTMA Trigger: GGCCATGGTGGACCAACACAAGGAGAACCTGGCCGC...GGGCTGACCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATATTTCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CAA 90 bp | CAGCAGGTGGCCGCCACTCACCATGCTAATTGTGCTTACATTACCTTGAAAGATTCCCTGTGGCATCCCTaGTCACCCCCACCATCCTTC | + |
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Preference number: 5 (lower is better) Translates to: QQVAATHHANCAYITLKDSLWHP*SPPPSF Trigger: GAAGGATGGTGGGGGTGACAAGGGATGCCACAGGGA...ATCTTTCAAGGTAATGTAAGCACAATTAGCATGGTGAGTGGCGGCCACCTGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CAA 90 bp | ATATCCTTGCTTGTCAAATGCTCCAGCAAGAGACATCGGGTCAGCCCTTTGAACGACCTGTCCTCCGTGTaGGTGAATCAGGGCGCACAC | + |
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Preference number: 5 (lower is better) Translates to: ISLLVKCSSKRHRVSPLNDLSSV*VNQGAH Trigger: GTGTGCGCCCTGATTCACCAACACGGAGGACAGGTC...GTTCAAAGGGCTGACCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CAA 90 bp | CTAGCGCACCCCACATTTTCTATCCGGCAAACTAAATGGCTCCCAATCAAGGCACTCACCAGGTTTTCTTaGACAGCAAAGAAGGCCGCA | + |
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Preference number: 5 (lower is better) Translates to: LAHPTFSIRQTKWLPIKALTRFS*TAKKAA Trigger: TGCGGCCTTCTTTGCTGTCAAAGAAAACCTGGTGAG...TGCCTTGATTGGGAGCCATTTAGTTTGCCGGATAGAAAATGTGGGGTGCGCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CAA 90 bp | GAGCCACGTAAAGGAGAAGAAATATCCTTGCTTGTCAAATGCTCCAGCAAGAGAGTCTCTCCGGATGTGTaGTTCTCTGGTCTGGAGAGC | + |
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Preference number: 5 (lower is better) Translates to: EPRKGEEISLLVKCSSKRVSPDV*FSGLES Trigger: GCTCTCCAGACCAGAGAACAACACATCCGGAGAGAC...TCTCTTGCTGGAGCATTTGACAAGCAAGGATATTTCTTCTCCTTTACGTGGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CAA 90 bp | CAGCAGGTGGCCGCCACTCACCATGCTAATTGTGCTTACATTACCTTGAAAGATATCCTTCTCCAGCCCTaGGAAAAGCTGTTGGTATCC | + |
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Preference number: 5 (lower is better) Translates to: QQVAATHHANCAYITLKDILLQP*EKLLVS Trigger: GGATACCAACAGCTTTTCCAAGGGCTGGAGAAGGAT...ATCTTTCAAGGTAATGTAAGCACAATTAGCATGGTGAGTGGCGGCCACCTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CAA 90 bp | ATGTGTGAGCCACGTAAAGGAGAAGAAATATCCTTGCTTGTCAAATGCTCCAGCCAGGTTCTCCTTGTGTaGGTCCACCATGGCCTTGAG | + |
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Preference number: 5 (lower is better) Translates to: MCEPRKGEEISLLVKCSSQVLLV*VHHGLE Trigger: CTCAAGGCCATGGTGGACCAACACAAGGAGAACCTG...GCTGGAGCATTTGACAAGCAAGGATATTTCTTCTCCTTTACGTGGCTCACACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CAA 90 bp | CCACATTTTCTATCCGGCAAACTAAATGGCTCCCAATCAAGGCAACACGAACAGAGTTCGGAGGAGCTATaGAGCTTCATGGTGCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: PHFLSGKLNGSQSRQHEQSSEEL*SFMVQD Trigger: ATCCTGCACCATGAAGCTCAATAGCTCCTCCGAACT...CTGTTCGTGTTGCCTTGATTGGGAGCCATTTAGTTTGCCGGATAGAAAATGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CAA 90 bp | AATATCCTTGCTTGTCAAATGCTCCAGCAAGAGACATCGGGTCAGCCCTTTGAAACATTGGCAGACTTTTaGAAGGGTCGGGTGTCCAAG | + |
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Preference number: 5 (lower is better) Translates to: NILACQMLQQETSGQPFETLADF*KGRVSK Trigger: CTTGGACACCCGACCCTTCAAAAAGTCTGCCAATGT...TTCAAAGGGCTGACCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CAA 90 bp | ATGTGTGAGCCACGTAAAGGAGAAGAAATATCCTTGCTTGTCAAATGCTCCAGCACCCCACAGACGTCTTaGCCACTGAAATCCATTTCG | + |
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Preference number: 5 (lower is better) Translates to: MCEPRKGEEISLLVKCSSTPQTS*PLKSIS Trigger: CGAAATGGATTTCAGTGGCAAAGACGTCTGTGGGGT...GCTGGAGCATTTGACAAGCAAGGATATTTCTTCTCCTTTACGTGGCTCACACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CAA 90 bp | TGCTGTGACAGATCAGGCACATTAGTGAGGAGAATTCTTCAGTGTATAAAATGTCCCTTGGAAAAGCTGTaGGTATCCCTGGGCTTGGTC | + |
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Preference number: 5 (lower is better) Translates to: CCDRSGTLVRRILQCIKCPLEKL*VSLGLV Trigger: GACCAAGCCCAGGGATACCAACAGCTTTTCCAAGGG...ACATTTTATACACTGAAGAATTCTCCTCACTAATGTGCCTGATCTGTCACAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CAA 90 bp | AATATCCTTGCTTGTCAAATGCTCCAGCAAGAGACATCGGGTCAGCCCTTTGAATATGTCAGCGATTTCTaGCCTGATGCTGATCATAGC | + |
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Preference number: 5 (lower is better) Translates to: NILACQMLQQETSGQPFEYVSDF*PDADHS Trigger: GCTATGATCAGCATCAGGCAAGAAATCGCTGACATA...TTCAAAGGGCTGACCCGATGTCTCTTGCTGGAGCATTTGACAAGCAAGGATATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CAA 90 bp | CCACATTTTCTATCCGGCAAACTAAATGGCTCCCAATCAAGGCAACACGAACAGTCTTCAAATACACCATaGGTAGATGGATACGTGATC | + |
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Preference number: 5 (lower is better) Translates to: PHFLSGKLNGSQSRQHEQSSNTP*VDGYVI Trigger: GATCACGTATCCATCTACCAATGGTGTATTTGAAGA...CTGTTCGTGTTGCCTTGATTGGGAGCCATTTAGTTTGCCGGATAGAAAATGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CAA 90 bp | TGCTGTGACAGATCAGGCACATTAGTGAGGAGAATTCTTCAGTGTATAAAATGTATTTCTGTGGCTTCTTaGAGGCCCTTTCCACCCATC | + |
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Preference number: 5 (lower is better) Translates to: CCDRSGTLVRRILQCIKCISVAS*RPFPPI Trigger: GATGGGTGGAAAGGGCCTCAAAGAAGCCACAGAAAT...ACATTTTATACACTGAAGAATTCTCCTCACTAATGTGCCTGATCTGTCACAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS-3UTR CAA 90 bp | ATGTGTGAGCCACGTAAAGGAGAAGAAATATCCTTGCTTGTCAAATGCTCCAGCAAAAATTTCTTCCTCTaGTTGTGTCTGTGGCACAGT | + |
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Preference number: 5 (lower is better) Translates to: MCEPRKGEEISLLVKCSSKNFFL*LCLWHS Trigger: ACTGTGCCACAGACACAACAAGAGGAAGAAATTTTT...GCTGGAGCATTTGACAAGCAAGGATATTTCTTCTCCTTTACGTGGCTCACACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS GCA 72 bp | TGCTGTCCCGGCTTCGCTGCGCCCAACTCAAGCCGGTaGCCCGAGCCAGGCGGTGGCCGCCCCCGGCTCCGC | + |
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Preference number: 6 (lower is better) Translates to: CCPGFAAPNSSR*PEPGGGRPRLR Trigger: GCGGAGCCGGGGGCGGCCACCGCCTGGCTCGGGGCACCGGCTTGAGTTGGGCGCAGCGAAGCCGGGACAGCA 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS TCA 72 bp | TGGGCAGGATGGAGCTGGAACCCCACGGGGCTGCACTaGCAGTGCCCACGGGCCAGGTGCCTTCAGTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: WAGWSWNPTGLH*QCPRARCLQLA Trigger: AGCCAACTGAAGGCACCTGGCCCGTGGGCACTGTCAGTGCAGCCCCGTGGGGTTCCAGCTCCATCCTGCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS GCA 72 bp | CCTCTTGTTGTGTCTGTGGCACAGTTGCATCGCCTCTaGAGCCGCGGTTGCCTCATCCAGCAGGGAAGCGTT | + |
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Preference number: 6 (lower is better) Translates to: PLVVSVAQLHRL*SRGCLIQQGSV Trigger: AACGCTTCCCTGCTGGATGAGGCAACCGCGGCTGCAGAGGCGATGCAACTGTGCCACAGACACAACAAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS CCA 72 bp | GCTTCAGCCCCTGGGATCCATGGTAAATGGCGAACATaGCAGCCATGTTGGCTAAAAGGGCCTGAGCCGTGC | + |
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Preference number: 6 (lower is better) Translates to: ASAPGIHGKWRT*QPCWLKGPEPC Trigger: GCACGGCTCAGGCCCTTTTAGCCAACATGGCTGCCATGTTCGCCATTTACCATGGATCCCAGGGGCTGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS CAA 72 bp | CATGTTCGCCCCGTCGAGGTAGACCTGTCCTCCGTGTaGGTGAATCAGGGCGCACACATCGCCGATATTCTC | + |
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Preference number: 6 (lower is better) Translates to: HVRPVEVDLSSV*VNQGAHIADIL Trigger: GAGAATATCGGCGATGTGTGCGCCCTGATTCACCAACACGGAGGACAGGTCTACCTCGACGGGGCGAACATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS CAA 90 bp | GACTCGGTCGTAGCCTGTGATCTCACACAGATCCTTCTCCAGCCCTaGGAAAAGCTGTTGGTATCCCTGGGCTTGGTCCAGCGGCACAAA | + |
|
Preference number: 6 (lower is better) Translates to: DSVVACDLTQILLQP*EKLLVSLGLVQRHK Trigger: TTTGTGCCGCTGGACCAAGCCCAGGGATACCAACAGCTTTTCCAAGGGCTGGAGAAGGATCTGTGTGAGATCACAGGCTACGACCGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS TCA 72 bp | AAATGCCAAGTGTGCCGTCATCGAAGAGTCGAAAGTTaGTTTGCCTCTGAGCTGCTCTGCCCAGCACCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: KCQVCRHRRVES*FASELLCPAPP Trigger: AGGAGGTGCTGGGCAGAGCAGCTCAGAGGCAAATCAACTTTCGACTCTTCGATGACGGCACACTTGGCATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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| CDS GCA 72 bp | TTTGTTCTCTGGTTTCACAAAGGGCAGTGGAAATGCTaGTACCTCTCTAGAATACGGCCGATCCCAGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: FVLWFHKGQWKC*YLSRIRPIPAG Trigger: TCCTGCTGGGATCGGCCGTATTCTAGAGAGGTAGCAGCATTTCCACTGCCCTTTGTGAAACCAGAGAACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025778.9 |
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