Pregenerated sensors for GLCE (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032252Ensembl transcript IDs: ENSMUST00000034785.8, ENSMUST00000185675.7
Found 243 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | ACGTCTGACAAGCCAAGCACTGACAGTGCTGTCACAGGCTCAGTGTaGCCTCTTAGGGGATTCTGGGATCACAAGATAAGTCAAGTAGCT | + |
Preference number: 1 (lower is better) Translates to: TSDKPSTDSAVTGSV*PLRGFWDHKISQVA Trigger: AGCTACTTGACTTATCTTGTGATCCCAGAATCCCCTAAGAGGTCACACTGAGCCTGTGACAGCACTGTCAGTGCTTGGCTTGTCAGACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR TCA 90 bp | CTGTACACCAACAAAGACAGAGGCCCTGCATCTGGAGAGTGCTTGTaGCATTTCTACACACCTCACAGATGTCGTGAGGCTCTTGAACGA | + |
Preference number: 1 (lower is better) Translates to: LYTNKDRGPASGECL*HFYTPHRCREALER Trigger: TCGTTCAAGAGCCTCACGACATCTGTGAGGTGTGTAGAAATGTCACAAGCACTCTCCAGATGCAGGGCCTCTGTCTTTGTTGGTGTACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR TCA 90 bp | TGTCACAAAATCAGTTCCACGATGATTTCACTGACTCCTCTCATCTaGAGACCAGTATGCAAACAGAAAGCAGAAGTCGGGGCCACTCCA | + |
Preference number: 1 (lower is better) Translates to: CHKISSTMISLTPLI*RPVCKQKAEVGATP Trigger: TGGAGTGGCCCCGACTTCTGCTTTCTGTTTGCATACTGGTCTTCAGATGAGAGGAGTCAGTGAAATCATCGTGGAACTGATTTTGTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR TCA 90 bp | GACCACCCTCCAGGAGGGCATCCAGTAAACACATTATTGCATATTTaGCACATGGCATATACCCCACATGTACAATGGAGAAGCAAGGAA | + |
Preference number: 1 (lower is better) Translates to: DHPPGGHPVNTLLHI*HMAYTPHVQWRSKE Trigger: TTCCTTGCTTCTCCATTGTACATGTGGGGTATATGCCATGTGTCAAATATGCAATAATGTGTTTACTGGATGCCCTCCTGGAGGGTGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR GCA 90 bp | AGTTTTGCTGTATATAAAACTAACATGTGCACATTGTGCTTGAACTaGAAAGGCTGTACAGCTTTACAGAGGACCACCCTCCAGGAGGGC | + |
Preference number: 1 (lower is better) Translates to: SFAVYKTNMCTLCLN*KGCTALQRTTLQEG Trigger: GCCCTCCTGGAGGGTGGTCCTCTGTAAAGCTGTACAGCCTTTGCAGTTCAAGCACAATGTGCACATGTTAGTTTTATATACAGCAAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR TCA 90 bp | ACACACTGCACTAGAGCAGACGTGGGGAAGACGATTATCAAACTTTaGCTGATTGTAGACCGTTTCATAAAACACAGCATGTCTGTGACT | + |
Preference number: 1 (lower is better) Translates to: THCTRADVGKTIIKL*LIVDRFIKHSMSVT Trigger: AGTCACAGACATGCTGTGTTTTATGAAACGGTCTACAATCAGTCAAAGTTTGATAATCGTCTTCCCCACGTCTGCTCTAGTGCAGTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR GCA 90 bp | ATGCAACTGTTTCAGAAGACTAACTTTAAGGGTCTCTTCTTACAGTaGTGTGACCCACAAACCCAGAACACAGCATTTAAAGTGTGCGAC | + |
Preference number: 1 (lower is better) Translates to: MQLFQKTNFKGLFLQ*CDPQTQNTAFKVCD Trigger: GTCGCACACTTTAAATGCTGTGTTCTGGGTTTGTGGGTCACAGCACTGTAAGAAGAGACCCTTAAAGTTAGTCTTCTGAAACAGTTGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR GCA 90 bp | GATGGCACACAGACAGCAGACACAGTAGCATCTTTTCTGTTTCAATaGTGGAATCGTTCAAAATTAAGCTTCAGAGAAACAGCAAGGACA | + |
Preference number: 1 (lower is better) Translates to: DGTQTADTVASFLFQ*WNRSKLSFRETART Trigger: TGTCCTTGCTGTTTCTCTGAAGCTTAATTTTGAACGATTCCAGCATTGAAACAGAAAAGATGCTACTGTGTCTGCTGTCTGTGTGCCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR CCA 90 bp | GTGACTCCTGAACACGACACTTCTCTTTTAAGGAGGAGGTACCAATaGTCAATTTCAAAGCATCAAGTCTGTCACAAGTTTAGGCTTATA | + |
Preference number: 1 (lower is better) Translates to: VTPEHDTSLLRRRYQ*SISKHQVCHKFRLI Trigger: TATAAGCCTAAACTTGTGACAGACTTGATGCTTTGAAATTGACCATTGGTACCTCCTCCTTAAAAGAGAAGTGTCGTGTTCAGGAGTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR TCA 90 bp | AACAAGTTTCATTTCAGTTGTGCTTATGTATGTGACCGTGAAACCTaGACACGGGCTGTGTTTAGATATACAGAGTTCAAGAAAACCATA | + |
Preference number: 1 (lower is better) Translates to: NKFHFSCAYVCDRET*TRAVFRYTEFKKTI Trigger: TATGGTTTTCTTGAACTCTGTATATCTAAACACAGCCCGTGTTCAGGTTTCACGGTCACATACATAAGCACAACTGAAATGAAACTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR GCA 90 bp | GTGCTTGAACTGCAAAGGCTGTACAGCTTTACAGAGGACCACCCTCCAGGAGGGCAAAGACAGAGGCCCTaGATCTGGAGAGTGCTTGTG | + |
Preference number: 2 (lower is better) Translates to: VLELQRLYSFTEDHPPGGQRQRP*IWRVLV Trigger: CACAAGCACTCTCCAGATGCAGGGCCTCTGTCTTTG...CCCTCCTGGAGGGTGGTCCTCTGTAAAGCTGTACAGCCTTTGCAGTTCAAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR TCA 90 bp | TTCTACACACCTCACAGATGTCGTGAGGCTCTTGAACGAAGCCGTTATATACAGGCTGAGCTCTGCTGCTaGGCGACACAGAAGAGGCTG | + |
Preference number: 2 (lower is better) Translates to: FYTPHRCREALERSRYIQAELCC*ATQKRL Trigger: CAGCCTCTTCTGTGTCGCTCAGCAGCAGAGCTCAGC...CTGTATATAACGGCTTCGTTCAAGAGCCTCACGACATCTGTGAGGTGTGTAGAA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR TCA 90 bp | GAGACAAATGTGCATGTTCAGATGTTGCTGAAACACCTCGTGTGTGAGAACCACGCTGAGCTCTGCTGCTaGGCGACACAGAAGAGGCTG | + |
Preference number: 2 (lower is better) Translates to: ETNVHVQMLLKHLVCENHAELCC*ATQKRL Trigger: CAGCCTCTTCTGTGTCGCTCAGCAGCAGAGCTCAGC...GTGGTTCTCACACACGAGGTGTTTCAGCAACATCTGAACATGCACATTTGTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR TCA 90 bp | ACTGACTCCTCTCATCTGAAGACCAGTATGCAAACAGAAAGCAGAAGTCGGGGCCTTGGTTCAGTGCACTaGCAGAGCGCTCTCCTCGAT | + |
Preference number: 2 (lower is better) Translates to: TDSSHLKTSMQTESRSRGLGSVH*QSALLD Trigger: ATCGAGGAGAGCGCTCTGTCAGTGCACTGAACCAAG...GCCCCGACTTCTGCTTTCTGTTTGCATACTGGTCTTCAGATGAGAGGAGTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR TCA 90 bp | ACTGACTCCTCTCATCTGAAGACCAGTATGCAAACAGAAAGCAGAAGTCGGGGCCGTGAAAAGCAATGGTaGCAACCCAGGCAGGAGAGA | + |
Preference number: 2 (lower is better) Translates to: TDSSHLKTSMQTESRSRGREKQW*QPRQER Trigger: TCTCTCCTGCCTGGGTTGTCACCATTGCTTTTCACG...GCCCCGACTTCTGCTTTCTGTTTGCATACTGGTCTTCAGATGAGAGGAGTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR GCA 90 bp | ACTGACTCCTCTCATCTGAAGACCAGTATGCAAACAGAAAGCAGAAGTCGGGGCGTGATACAGACACACTaGACTAGAGCAGACGTGGGG | + |
Preference number: 2 (lower is better) Translates to: TDSSHLKTSMQTESRSRGVIQTH*TRADVG Trigger: CCCCACGTCTGCTCTAGTGCAGTGTGTCTGTATCAC...GCCCCGACTTCTGCTTTCTGTTTGCATACTGGTCTTCAGATGAGAGGAGTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR GCA 90 bp | GTGCTTGAACTGCAAAGGCTGTACAGCTTTACAGAGGACCACCCTCCAGGAGGGCAAACCAATCCCTGTTaGTTTTACCTAATGCCCGGA | + |
Preference number: 2 (lower is better) Translates to: VLELQRLYSFTEDHPPGGQTNPC*FYLMPG Trigger: TCCGGGCATTAGGTAAAAGCAACAGGGATTGGTTTG...CCCTCCTGGAGGGTGGTCCTCTGTAAAGCTGTACAGCCTTTGCAGTTCAAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR GCA 90 bp | GTTTTCTGGAGGCAAAAATGCATGGGTCCCTGGCAGTGTTCCTCCATACATGCCACAGCATTTAAAGTGTaGGACGTGCTGCTGAGCTCT | + |
Preference number: 2 (lower is better) Translates to: VFWRQKCMGPWQCSSIHATAFKV*DVLLSS Trigger: AGAGCTCAGCAGCACGTCGCACACTTTAAATGCTGT...GGCATGTATGGAGGAACACTGCCAGGGACCCATGCATTTTTGCCTCCAGAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR GCA 90 bp | GTTTTCTGGAGGCAAAAATGCATGGGTCCCTGGCAGTGTTCCTCCATACATGCCAAGTCAAGTAGCTGTTaGAACGTGGAAGGCAGTGGA | + |
Preference number: 2 (lower is better) Translates to: VFWRQKCMGPWQCSSIHAKSSSC*NVEGSG Trigger: TCCACTGCCTTCCACGTTGCAACAGCTACTTGACTT...GGCATGTATGGAGGAACACTGCCAGGGACCCATGCATTTTTGCCTCCAGAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR CCA 90 bp | GTTTTCTGGAGGCAAAAATGCATGGGTCCCTGGCAGTGTTCCTCCATACATGCCAACAAATCTGAGAAGTaGACAGTGTTCCCAGGTGGG | + |
Preference number: 2 (lower is better) Translates to: VFWRQKCMGPWQCSSIHANKSEK*TVFPGG Trigger: CCCACCTGGGAACACTGTCCACTTCTCAGATTTGTT...GGCATGTATGGAGGAACACTGCCAGGGACCCATGCATTTTTGCCTCCAGAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR TCA 90 bp | GTTTTCTGGAGGCAAAAATGCATGGGTCCCTGGCAGTGTTCCTCCATACATGCCAACACAGCATGTCTGTaGCTTCTTGTGCAGTCAACA | + |
Preference number: 2 (lower is better) Translates to: VFWRQKCMGPWQCSSIHANTACL*LLVQST Trigger: TGTTGACTGCACAAGAAGTCACAGACATGCTGTGTT...GGCATGTATGGAGGAACACTGCCAGGGACCCATGCATTTTTGCCTCCAGAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR TCA 90 bp | GTGCTTGAACTGCAAAGGCTGTACAGCTTTACAGAGGACCACCCTCCAGGAGGGCTTCGCTTTTATTGCTaGGACAAATGTGCATGTTCA | + |
Preference number: 2 (lower is better) Translates to: VLELQRLYSFTEDHPPGGLRFYC*DKCACS Trigger: TGAACATGCACATTTGTCTCAGCAATAAAAGCGAAG...CCCTCCTGGAGGGTGGTCCTCTGTAAAGCTGTACAGCCTTTGCAGTTCAAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR TCA 90 bp | AGGAGGAGGTACCAATGGTCAATTTCAAAGCATCAAGTCTGTCACAAGTTTAGGCTTGGTTCAGTGCACTaGCAGAGCGCTCTCCTCGAT | + |
Preference number: 2 (lower is better) Translates to: RRRYQWSISKHQVCHKFRLGSVH*QSALLD Trigger: ATCGAGGAGAGCGCTCTGTCAGTGCACTGAACCAAG...CCTAAACTTGTGACAGACTTGATGCTTTGAAATTGACCATTGGTACCTCCTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR TCA 90 bp | GTTTTCTGGAGGCAAAAATGCATGGGTCCCTGGCAGTGTTCCTCCATACATGCCCTTTACTGTGACTCCTaGACACGACACTTCTCTTTT | + |
Preference number: 2 (lower is better) Translates to: VFWRQKCMGPWQCSSIHALYCDS*TRHFSF Trigger: AAAAGAGAAGTGTCGTGTTCAGGAGTCACAGTAAAG...GGCATGTATGGAGGAACACTGCCAGGGACCCATGCATTTTTGCCTCCAGAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR TCA 90 bp | GTTTTCTGGAGGCAAAAATGCATGGGTCCCTGGCAGTGTTCCTCCATACATGCCGAAAAGCAACAGCAGTaGACTGCCATTTCTACATCA | + |
Preference number: 2 (lower is better) Translates to: VFWRQKCMGPWQCSSIHAEKQQQ*TAISTS Trigger: TGATGTAGAAATGGCAGTTCACTGCTGTTGCTTTTC...GGCATGTATGGAGGAACACTGCCAGGGACCCATGCATTTTTGCCTCCAGAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR CCA 90 bp | GTTTTCTGGAGGCAAAAATGCATGGGTCCCTGGCAGTGTTCCTCCATACATGCCACTTTCCCTCTTCAGTaGAAAAGGACAACCACATTG | + |
Preference number: 2 (lower is better) Translates to: VFWRQKCMGPWQCSSIHATFPLQ*KRTTTL Trigger: CAATGTGGTTGTCCTTTTCCACTGAAGAGGGAAAGT...GGCATGTATGGAGGAACACTGCCAGGGACCCATGCATTTTTGCCTCCAGAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR CAA 90 bp | GGACCACCCTCCAGGAGGGCATCCAGTAAACACATTATTGCATATTaGACACATGGCATATACCCCACATGTACAATGGAGAAGCAAGGA | + |
Preference number: 2 (lower is better) Translates to: GPPSRRASSKHIIAY*THGIYPTCTMEKQG Trigger: TCCTTGCTTCTCCATTGTACATGTGGGGTATATGCCATGTGTCAAATATGCAATAATGTGTTTACTGGATGCCCTCCTGGAGGGTGGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR TCA 90 bp | TTCTACACACCTCACAGATGTCGTGAGGCTCTTGAACGAAGCCGTTATATACAGGGAGAGACTTTACTGTaGCTCCTGAACACGACACTT | + |
Preference number: 2 (lower is better) Translates to: FYTPHRCREALERSRYIQGETLL*LLNTTL Trigger: AAGTGTCGTGTTCAGGAGTCACAGTAAAGTCTCTCC...CTGTATATAACGGCTTCGTTCAAGAGCCTCACGACATCTGTGAGGTGTGTAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR TCA 90 bp | TTCTACACACCTCACAGATGTCGTGAGGCTCTTGAACGAAGCCGTTATATACAGAGGACAGAAACGACGTaGAAAGCAATGGTGACAACC | + |
Preference number: 2 (lower is better) Translates to: FYTPHRCREALERSRYIQRTETT*KAMVTT Trigger: GGTTGTCACCATTGCTTTTCACGTCGTTTCTGTCCT...CTGTATATAACGGCTTCGTTCAAGAGCCTCACGACATCTGTGAGGTGTGTAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR TCA 90 bp | TTCTACACACCTCACAGATGTCGTGAGGCTCTTGAACGAAGCCGTTATATACAGCTGACTCCTCTCATCTaGAGACCAGTATGCAAACAG | + |
Preference number: 2 (lower is better) Translates to: FYTPHRCREALERSRYIQLTPLI*RPVCKQ Trigger: CTGTTTGCATACTGGTCTTCAGATGAGAGGAGTCAG...CTGTATATAACGGCTTCGTTCAAGAGCCTCACGACATCTGTGAGGTGTGTAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR CCA 90 bp | GAGACAAATGTGCATGTTCAGATGTTGCTGAAACACCTCGTGTGTGAGAACCACCGACACAGAAGAGGCTaGAATGCACTTTTGGTTTCG | + |
Preference number: 2 (lower is better) Translates to: ETNVHVQMLLKHLVCENHRHRRG*NALLVS Trigger: CGAAACCAAAAGTGCATTCCAGCCTCTTCTGTGTCG...GTGGTTCTCACACACGAGGTGTTTCAGCAACATCTGAACATGCACATTTGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR CCA 90 bp | TTCTACACACCTCACAGATGTCGTGAGGCTCTTGAACGAAGCCGTTATATACAGAGCAGACACTGTCCATaGCATGAGGACTCTGAAACT | + |
Preference number: 2 (lower is better) Translates to: FYTPHRCREALERSRYIQSRHCP*HEDSET Trigger: AGTTTCAGAGTCCTCATGCCATGGACAGTGTCTGCT...CTGTATATAACGGCTTCGTTCAAGAGCCTCACGACATCTGTGAGGTGTGTAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR CAA 90 bp | GGAGTCTTCGCTTTTATTGCTGAGACAAATGTGCATGTTCAGATGTaGCTGAAACACCTCGTGTGTGAGAACCACAGAGGTAAAAGCTGG | + |
Preference number: 2 (lower is better) Translates to: GVFAFIAETNVHVQM*LKHLVCENHRGKSW Trigger: CCAGCTTTTACCTCTGTGGTTCTCACACACGAGGTGTTTCAGCAACATCTGAACATGCACATTTGTCTCAGCAATAAAAGCGAAGACTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR TCA 90 bp | CATGGCATGAGGACTCTGAAACTCACTTACAGATCTGATGGCACACAGACAGCACTCCCTCTCAAGAAATaGACCTATGGGAAAGAAACA | + |
Preference number: 2 (lower is better) Translates to: HGMRTLKLTYRSDGTQTALPLKK*TYGKET Trigger: TGTTTCTTTCCCATAGGTTCATTTCTTGAGAGGGAG...TGCTGTCTGTGTGCCATCAGATCTGTAAGTGAGTTTCAGAGTCCTCATGCCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR CCA 90 bp | GTCTTCGCTTTTATTGCTGAGACAAATGTGCATGTTCAGATGTTGCTGAAACACAGAGGGCAGAGGTCTTaGTTCAGTGCACTGACAGAG | + |
Preference number: 2 (lower is better) Translates to: VFAFIAETNVHVQMLLKHRGQRS*FSALTE Trigger: CTCTGTCAGTGCACTGAACCAAGACCTCTGCCCTCT...GTGTTTCAGCAACATCTGAACATGCACATTTGTCTCAGCAATAAAAGCGAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR CCA 90 bp | AAGTGTCATTATTTGTTCCTAGAAAGGGTGAGGCTTATGTTACCCAACTGTCTCAGAGGGCAGAGGTCTTaGTTCAGTGCACTGACAGAG | + |
Preference number: 2 (lower is better) Translates to: KCHYLFLERVRLMLPNCLRGQRS*FSALTE Trigger: CTCTGTCAGTGCACTGAACCAAGACCTCTGCCCTCT...GAGACAGTTGGGTAACATAAGCCTCACCCTTTCTAGGAACAAATAATGACACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR CAA 90 bp | CAATGGAGAAGCAAGGAAACAATTACAAGAACAAACCAGCAGCTTTaGGTAAGAGTCTGTACACCAACAAAGACAGAGGCCCTGCATCTG | + |
Preference number: 2 (lower is better) Translates to: QWRSKETITRTNQQL*VRVCTPTKTEALHL Trigger: CAGATGCAGGGCCTCTGTCTTTGTTGGTGTACAGACTCTTACCAAAAGCTGCTGGTTTGTTCTTGTAATTGTTTCCTTGCTTCTCCATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR TCA 90 bp | GAGACAAATGTGCATGTTCAGATGTTGCTGAAACACCTCGTGTGTGAGAACCACCTTTACTGTGACTCCTaGACACGACACTTCTCTTTT | + |
Preference number: 2 (lower is better) Translates to: ETNVHVQMLLKHLVCENHLYCDS*TRHFSF Trigger: AAAAGAGAAGTGTCGTGTTCAGGAGTCACAGTAAAG...GTGGTTCTCACACACGAGGTGTTTCAGCAACATCTGAACATGCACATTTGTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR GCA 90 bp | AGGAGGAGGTACCAATGGTCAATTTCAAAGCATCAAGTCTGTCACAAGTTTAGGACAGCATTTAAAGTGTaGGACGTGCTGCTGAGCTCT | + |
Preference number: 2 (lower is better) Translates to: RRRYQWSISKHQVCHKFRTAFKV*DVLLSS Trigger: AGAGCTCAGCAGCACGTCGCACACTTTAAATGCTGT...CCTAAACTTGTGACAGACTTGATGCTTTGAAATTGACCATTGGTACCTCCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR GCA 90 bp | ACTGACTCCTCTCATCTGAAGACCAGTATGCAAACAGAAAGCAGAAGTCGGGGCAACAAATGCAACAAATaGTCACTCCCTCTCAAGAAA | + |
Preference number: 2 (lower is better) Translates to: TDSSHLKTSMQTESRSRGNKCNK*SLPLKK Trigger: TTTCTTGAGAGGGAGTGAGCATTTGTTGCATTTGTT...GCCCCGACTTCTGCTTTCTGTTTGCATACTGGTCTTCAGATGAGAGGAGTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR GCA 90 bp | CATGGCATGAGGACTCTGAAACTCACTTACAGATCTGATGGCACACAGACAGCAAACAAATGCAACAAATaGTCACTCCCTCTCAAGAAA | + |
Preference number: 2 (lower is better) Translates to: HGMRTLKLTYRSDGTQTANKCNK*SLPLKK Trigger: TTTCTTGAGAGGGAGTGAGCATTTGTTGCATTTGTT...TGCTGTCTGTGTGCCATCAGATCTGTAAGTGAGTTTCAGAGTCCTCATGCCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR CCA 90 bp | AAGTGTCATTATTTGTTCCTAGAAAGGGTGAGGCTTATGTTACCCAACTGTCTCCGACACAGAAGAGGCTaGAATGCACTTTTGGTTTCG | + |
Preference number: 2 (lower is better) Translates to: KCHYLFLERVRLMLPNCLRHRRG*NALLVS Trigger: CGAAACCAAAAGTGCATTCCAGCCTCTTCTGTGTCG...GAGACAGTTGGGTAACATAAGCCTCACCCTTTCTAGGAACAAATAATGACACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR CAA 90 bp | GCCTTTAACATGCATCTGACCAGCAGCATGGATAAGTGTCATTATTaGTTCCTAGAAAGGGTGAGGCTTATGTTACCCAACTGTCTCTAT | + |
Preference number: 2 (lower is better) Translates to: AFNMHLTSSMDKCHY*FLERVRLMLPNCLY Trigger: ATAGAGACAGTTGGGTAACATAAGCCTCACCCTTTCTAGGAACAAATAATGACACTTATCCATGCTGCTGGTCAGATGCATGTTAAAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR GCA 90 bp | AACAATTACAAGAACAAACCAGCAGCTTTTGGTAAGAGTCTGTACACCAACAAATTCTGGAGGCAAAAATaGATGGGTCCCTGGCAGTGT | + |
Preference number: 2 (lower is better) Translates to: NNYKNKPAAFGKSLYTNKFWRQK*MGPWQC Trigger: ACACTGCCAGGGACCCATGCATTTTTGCCTCCAGAA...TTTGTTGGTGTACAGACTCTTACCAAAAGCTGCTGGTTTGTTCTTGTAATTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR TCA 90 bp | AAGTGTCATTATTTGTTCCTAGAAAGGGTGAGGCTTATGTTACCCAACTGTCTCCTCCCTCTCAAGAAATaGACCTATGGGAAAGAAACA | + |
Preference number: 2 (lower is better) Translates to: KCHYLFLERVRLMLPNCLLPLKK*TYGKET Trigger: TGTTTCTTTCCCATAGGTTCATTTCTTGAGAGGGAG...GAGACAGTTGGGTAACATAAGCCTCACCCTTTCTAGGAACAAATAATGACACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
||
3UTR-3UTR TCA 90 bp | AACAATTACAAGAACAAACCAGCAGCTTTTGGTAAGAGTCTGTACACCAACAAAAGGACAGAAACGACGTaGAAAGCAATGGTGACAACC | + |
Preference number: 2 (lower is better) Translates to: NNYKNKPAAFGKSLYTNKRTETT*KAMVTT Trigger: GGTTGTCACCATTGCTTTTCACGTCGTTTCTGTCCT...TTTGTTGGTGTACAGACTCTTACCAAAAGCTGCTGGTTTGTTCTTGTAATTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
||
3UTR-3UTR TCA 90 bp | AACAATTACAAGAACAAACCAGCAGCTTTTGGTAAGAGTCTGTACACCAACAAACTGACTCCTCTCATCTaGAGACCAGTATGCAAACAG | + |
Preference number: 2 (lower is better) Translates to: NNYKNKPAAFGKSLYTNKLTPLI*RPVCKQ Trigger: CTGTTTGCATACTGGTCTTCAGATGAGAGGAGTCAG...TTTGTTGGTGTACAGACTCTTACCAAAAGCTGCTGGTTTGTTCTTGTAATTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
||
3UTR-3UTR TCA 90 bp | AACAATTACAAGAACAAACCAGCAGCTTTTGGTAAGAGTCTGTACACCAACAAAAACACAGCATGTCTGTaGCTTCTTGTGCAGTCAACA | + |
Preference number: 2 (lower is better) Translates to: NNYKNKPAAFGKSLYTNKNTACL*LLVQST Trigger: TGTTGACTGCACAAGAAGTCACAGACATGCTGTGTT...TTTGTTGGTGTACAGACTCTTACCAAAAGCTGCTGGTTTGTTCTTGTAATTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
||
3UTR-3UTR TCA 90 bp | AACAATTACAAGAACAAACCAGCAGCTTTTGGTAAGAGTCTGTACACCAACAAATGTAATACAGCACACTaGTTTCTAAAAGCCTGCTTT | + |
Preference number: 2 (lower is better) Translates to: NNYKNKPAAFGKSLYTNKCNTAH*FLKACF Trigger: AAAGCAGGCTTTTAGAAATCAGTGTGCTGTATTACA...TTTGTTGGTGTACAGACTCTTACCAAAAGCTGCTGGTTTGTTCTTGTAATTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
||
3UTR-3UTR TCA 90 bp | AACAATTACAAGAACAAACCAGCAGCTTTTGGTAAGAGTCTGTACACCAACAAAACGATTATCAAACTTTaGCTGATTGTAGACCGTTTC | + |
Preference number: 2 (lower is better) Translates to: NNYKNKPAAFGKSLYTNKTIIKL*LIVDRF Trigger: GAAACGGTCTACAATCAGTCAAAGTTTGATAATCGT...TTTGTTGGTGTACAGACTCTTACCAAAAGCTGCTGGTTTGTTCTTGTAATTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
||
3UTR TCA 72 bp | CCCAGAACACAGCATTTAAAGTGTGCGACGTGCTGCTaGGCTCTGCTGCTGAGCGACACAGAAGAGGCTGGA | + |
Preference number: 3 (lower is better) Translates to: PRTQHLKCATCC*ALLLSDTEEAG Trigger: TCCAGCCTCTTCTGTGTCGCTCAGCAGCAGAGCTCAGCAGCACGTCGCACACTTTAAATGCTGTGTTCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
||
3UTR GCA 72 bp | TGTGACCCACAAACCCAGAACACAGCATTTAAAGTGTaGGACGTGCTGCTGAGCTCTGCTGCTGAGCGACAC | + |
Preference number: 3 (lower is better) Translates to: CDPQTQNTAFKV*DVLLSSAAERH Trigger: GTGTCGCTCAGCAGCAGAGCTCAGCAGCACGTCGCACACTTTAAATGCTGTGTTCTGGGTTTGTGGGTCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
||
3UTR TCA 72 bp | AAGCCAAGCACTGACAGTGCTGTCACAGGCTCAGTGTaGCCTCTTAGGGGATTCTGGGATCACAAGATAAGT | + |
Preference number: 3 (lower is better) Translates to: KPSTDSAVTGSV*PLRGFWDHKIS Trigger: ACTTATCTTGTGATCCCAGAATCCCCTAAGAGGTCACACTGAGCCTGTGACAGCACTGTCAGTGCTTGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
||
3UTR TCA 72 bp | AACAAAGACAGAGGCCCTGCATCTGGAGAGTGCTTGTaGCATTTCTACACACCTCACAGATGTCGTGAGGCT | + |
Preference number: 3 (lower is better) Translates to: NKDRGPASGECL*HFYTPHRCREA Trigger: AGCCTCACGACATCTGTGAGGTGTGTAGAAATGTCACAAGCACTCTCCAGATGCAGGGCCTCTGTCTTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
||
3UTR CCA 72 bp | TTTGTAGTTTTCTGGAGGCAAAAATGCATGGGTCCCTaGCAGTGTTCCTCCATACATGCCCAGTTCTCCCAC | + |
Preference number: 3 (lower is better) Translates to: FVVFWRQKCMGP*QCSSIHAQFSH Trigger: GTGGGAGAACTGGGCATGTATGGAGGAACACTGCCAGGGACCCATGCATTTTTGCCTCCAGAAAACTACAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
||
3UTR-3UTR CAA 90 bp | GTTTTCTGGAGGCAAAAATGCATGGGTCCCTGGCAGTGTTCCTCCATACATGCCAAAAGGACAACCACATaGGTAAGGCACTGGTGTTTG | + |
Preference number: 3 (lower is better) Translates to: VFWRQKCMGPWQCSSIHAKRTTT*VRHWCL Trigger: CAAACACCAGTGCCTTACCAATGTGGTTGTCCTTTT...GGCATGTATGGAGGAACACTGCCAGGGACCCATGCATTTTTGCCTCCAGAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
||
3UTR-3UTR CAA 90 bp | GTGCTTGAACTGCAAAGGCTGTACAGCTTTACAGAGGACCACCCTCCAGGAGGGCACATTATTGCATATTaGACACATGGCATATACCCC | + |
Preference number: 3 (lower is better) Translates to: VLELQRLYSFTEDHPPGGHIIAY*THGIYP Trigger: GGGGTATATGCCATGTGTCAAATATGCAATAATGTG...CCCTCCTGGAGGGTGGTCCTCTGTAAAGCTGTACAGCCTTTGCAGTTCAAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
||
3UTR TCA 72 bp | GTGGGCAGATCACCCACCTCGCCTTTAACATGCATCTaGCCAGCAGCATGGATAAGTGTCATTATTTGTTCC | + |
Preference number: 3 (lower is better) Translates to: VGRSPTSPLTCI*PAAWISVIICS Trigger: GGAACAAATAATGACACTTATCCATGCTGCTGGTCAGATGCATGTTAAAGGCGAGGTGGGTGATCTGCCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR GCA 72 bp | GGGATTCTGGGATCACAAGATAAGTCAAGTAGCTGTTaGAACGTGGAAGGCAGTGGAAAAGCAACAGCAGTG | + |
Preference number: 3 (lower is better) Translates to: GILGSQDKSSSC*NVEGSGKATAV Trigger: CACTGCTGTTGCTTTTCCACTGCCTTCCACGTTGCAACAGCTACTTGACTTATCTTGTGATCCCAGAATCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR GCA 72 bp | AACCTAGGGAACTTTGTAGTTTTCTGGAGGCAAAAATaGATGGGTCCCTGGCAGTGTTCCTCCATACATGCC | + |
Preference number: 3 (lower is better) Translates to: NLGNFVVFWRQK*MGPWQCSSIHA Trigger: GGCATGTATGGAGGAACACTGCCAGGGACCCATGCATTTTTGCCTCCAGAAAACTACAAAGTTCCCTAGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR CAA 90 bp | GAGACAAATGTGCATGTTCAGATGTTGCTGAAACACCTCGTGTGTGAGAACCACGCAAACCAATCCCTGTaGCTTTTACCTAATGCCCGG | + |
Preference number: 3 (lower is better) Translates to: ETNVHVQMLLKHLVCENHANQSL*LLPNAR Trigger: CCGGGCATTAGGTAAAAGCAACAGGGATTGGTTTGC...GTGGTTCTCACACACGAGGTGTTTCAGCAACATCTGAACATGCACATTTGTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
||
3UTR-3UTR CAA 90 bp | GTTTTCTGGAGGCAAAAATGCATGGGTCCCTGGCAGTGTTCCTCCATACATGCCGAGTCTTCGCTTTTATaGCTGAGACAAATGTGCATG | + |
Preference number: 3 (lower is better) Translates to: VFWRQKCMGPWQCSSIHAESSLL*LRQMCM Trigger: CATGCACATTTGTCTCAGCAATAAAAGCGAAGACTC...GGCATGTATGGAGGAACACTGCCAGGGACCCATGCATTTTTGCCTCCAGAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR TCA 72 bp | TTAAGCTTCAGAGAAACAGCAAGGACAGAAACGACGTaGAAAGCAATGGTGACAACCCAGGCAGGAGAGACT | + |
Preference number: 3 (lower is better) Translates to: LSFRETARTETT*KAMVTTQAGET Trigger: AGTCTCTCCTGCCTGGGTTGTCACCATTGCTTTTCACGTCGTTTCTGTCCTTGCTGTTTCTCTGAAGCTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
||
3UTR TCA 72 bp | CCATGGCATGAGGACTCTGAAACTCACTTACAGATCTaGTGGCACACAGACAGCAGACACAGTAGCATCTTT | + |
Preference number: 3 (lower is better) Translates to: PWHEDSETHLQI*WHTDSRHSSIF Trigger: AAAGATGCTACTGTGTCTGCTGTCTGTGTGCCATCAGATCTGTAAGTGAGTTTCAGAGTCCTCATGCCATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR TCA 72 bp | ATCAGTTCCACGATGATTTCACTGACTCCTCTCATCTaGAGACCAGTATGCAAACAGAAAGCAGAAGTCGGG | + |
Preference number: 3 (lower is better) Translates to: ISSTMISLTPLI*RPVCKQKAEVG Trigger: CCCGACTTCTGCTTTCTGTTTGCATACTGGTCTTCAGATGAGAGGAGTCAGTGAAATCATCGTGGAACTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR CAA 90 bp | AAGTGTCATTATTTGTTCCTAGAAAGGGTGAGGCTTATGTTACCCAACTGTCTCGCAAACCAATCCCTGTaGCTTTTACCTAATGCCCGG | + |
Preference number: 3 (lower is better) Translates to: KCHYLFLERVRLMLPNCLANQSL*LLPNAR Trigger: CCGGGCATTAGGTAAAAGCAACAGGGATTGGTTTGC...GAGACAGTTGGGTAACATAAGCCTCACCCTTTCTAGGAACAAATAATGACACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR CAA 90 bp | TTCTACACACCTCACAGATGTCGTGAGGCTCTTGAACGAAGCCGTTATATACAGGAGTCTTCGCTTTTATaGCTGAGACAAATGTGCATG | + |
Preference number: 3 (lower is better) Translates to: FYTPHRCREALERSRYIQESSLL*LRQMCM Trigger: CATGCACATTTGTCTCAGCAATAAAAGCGAAGACTC...CTGTATATAACGGCTTCGTTCAAGAGCCTCACGACATCTGTGAGGTGTGTAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR TCA 72 bp | CCAGGAGGGCATCCAGTAAACACATTATTGCATATTTaGCACATGGCATATACCCCACATGTACAATGGAGA | + |
Preference number: 3 (lower is better) Translates to: PGGHPVNTLLHI*HMAYTPHVQWR Trigger: TCTCCATTGTACATGTGGGGTATATGCCATGTGTCAAATATGCAATAATGTGTTTACTGGATGCCCTCCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR CCA 72 bp | AAAACAAACCCAAACAAACCAACTTTCCCTCTTCAGTaGAAAAGGACAACCACATTGGTAAGGCACTGGTGT | + |
Preference number: 3 (lower is better) Translates to: KTNPNKPTFPLQ*KRTTTLVRHWC Trigger: ACACCAGTGCCTTACCAATGTGGTTGTCCTTTTCCACTGAAGAGGGAAAGTTGGTTTGTTTGGGTTTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR CAA 90 bp | GAGACAAATGTGCATGTTCAGATGTTGCTGAAACACCTCGTGTGTGAGAACCACGACGATTATCAAACTTaGACTGATTGTAGACCGTTT | + |
Preference number: 3 (lower is better) Translates to: ETNVHVQMLLKHLVCENHDDYQT*TDCRPF Trigger: AAACGGTCTACAATCAGTCAAAGTTTGATAATCGTC...GTGGTTCTCACACACGAGGTGTTTCAGCAACATCTGAACATGCACATTTGTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
||
3UTR TCA 72 bp | ACTAGAGCAGACGTGGGGAAGACGATTATCAAACTTTaGCTGATTGTAGACCGTTTCATAAAACACAGCATG | + |
Preference number: 3 (lower is better) Translates to: TRADVGKTIIKL*LIVDRFIKHSM Trigger: CATGCTGTGTTTTATGAAACGGTCTACAATCAGTCAAAGTTTGATAATCGTCTTCCCCACGTCTGCTCTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR TCA 72 bp | TTATTGCTGAGACAAATGTGCATGTTCAGATGTTGCTaGAACACCTCGTGTGTGAGAACCACAGAGGTAAAA | + |
Preference number: 3 (lower is better) Translates to: LLLRQMCMFRCC*NTSCVRTTEVK Trigger: TTTTACCTCTGTGGTTCTCACACACGAGGTGTTTCAGCAACATCTGAACATGCACATTTGTCTCAGCAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR CAA 90 bp | GCTTATGTTACCCAACTGTCTCTATATTATCACACCCTAAACAAAAACCAGAGCTGTAATGTCCTCTCATaGGACAGGACTACTAAAGGA | + |
Preference number: 3 (lower is better) Translates to: AYVTQLSLYYHTLNKNQSCNVLS*DRTTKG Trigger: TCCTTTAGTAGTCCTGTCCAATGAGAGGACATTACA...GCTCTGGTTTTTGTTTAGGGTGTGATAATATAGAGACAGTTGGGTAACATAAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR-3UTR CAA 90 bp | GTCTTCGCTTTTATTGCTGAGACAAATGTGCATGTTCAGATGTTGCTGAAACACGATAAGTGTCATTATTaGTTCCTAGAAAGGGTGAGG | + |
Preference number: 3 (lower is better) Translates to: VFAFIAETNVHVQMLLKHDKCHY*FLERVR Trigger: CCTCACCCTTTCTAGGAACAAATAATGACACTTATC...GTGTTTCAGCAACATCTGAACATGCACATTTGTCTCAGCAATAAAAGCGAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR TCA 72 bp | TTGCTGTATATAAAACTAACATGTGCACATTGTGCTTaGACTGCAAAGGCTGTACAGCTTTACAGAGGACCA | + |
Preference number: 3 (lower is better) Translates to: LLYIKLTCAHCA*TAKAVQLYRGP Trigger: TGGTCCTCTGTAAAGCTGTACAGCCTTTGCAGTTCAAGCACAATGTGCACATGTTAGTTTTATATACAGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
||
3UTR GCA 72 bp | TTTCAGAAGACTAACTTTAAGGGTCTCTTCTTACAGTaGTGTGACCCACAAACCCAGAACACAGCATTTAAA | + |
Preference number: 3 (lower is better) Translates to: FQKTNFKGLFLQ*CDPQTQNTAFK Trigger: TTTAAATGCTGTGTTCTGGGTTTGTGGGTCACAGCACTGTAAGAAGAGACCCTTAAAGTTAGTCTTCTGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR CCA 72 bp | GAACACGACACTTCTCTTTTAAGGAGGAGGTACCAATaGTCAATTTCAAAGCATCAAGTCTGTCACAAGTTT | + |
Preference number: 3 (lower is better) Translates to: EHDTSLLRRRYQ*SISKHQVCHKF Trigger: AAACTTGTGACAGACTTGATGCTTTGAAATTGACCATTGGTACCTCCTCCTTAAAAGAGAAGTGTCGTGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR CCA 72 bp | ACAGCAGACACAGTAGCATCTTTTCTGTTTCAATGCTaGAATCGTTCAAAATTAAGCTTCAGAGAAACAGCA | + |
Preference number: 3 (lower is better) Translates to: TADTVASFLFQC*NRSKLSFRETA Trigger: TGCTGTTTCTCTGAAGCTTAATTTTGAACGATTCCAGCATTGAAACAGAAAAGATGCTACTGTGTCTGCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR CCA 72 bp | GGCTGTTTTACTACTGAAATGGTGACAGATTCAACATaGAAGCTAACTCAGAGAAGTGAACCAAACCAATAT | + |
Preference number: 3 (lower is better) Translates to: GCFTTEMVTDST*KLTQRSEPNQY Trigger: ATATTGGTTTGGTTCACTTCTCTGAGTTAGCTTCCATGTTGAATCTGTCACCATTTCAGTAGTAAAACAGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR TCA 90 bp | GTTTTCTGGAGGCAAAAATGCATGGGTCCCTGGCAGTGTTCCTCCATACATGCCCTGCCACACTGGCCATaGAGCACCCCTTGGGCACAG | + |
Preference number: 4 (lower is better) Translates to: VFWRQKCMGPWQCSSIHALPHWP*STPWAQ Trigger: CTGTGCCCAAGGGGTGCTTCATGGCCAGTGTGGCAG...GGCATGTATGGAGGAACACTGCCAGGGACCCATGCATTTTTGCCTCCAGAAAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR CAA 72 bp | CTGCATGGAGGCCTACATGATGAGAGGGCAGAGGTCTaGGTTCAGTGCACTGACAGAGCGCTCTCCTCGATA | + |
Preference number: 4 (lower is better) Translates to: LHGGLHDERAEV*VQCTDRALSSI Trigger: TATCGAGGAGAGCGCTCTGTCAGTGCACTGAACCAAGACCTCTGCCCTCTCATCATGTAGGCCTCCATGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR TCA 90 bp | GTGCTTGAACTGCAAAGGCTGTACAGCTTTACAGAGGACCACCCTCCAGGAGGGGGTAACTGTACTCCATaGAGTTCTGGGCCCAATGCC | + |
Preference number: 4 (lower is better) Translates to: VLELQRLYSFTEDHPPGGGNCTP*SSGPNA Trigger: GGCATTGGGCCCAGAACTTCATGGAGTACAGTTACC...CCCTCCTGGAGGGTGGTCCTCTGTAAAGCTGTACAGCCTTTGCAGTTCAAGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR TCA 90 bp | GTGCTTGAACTGCAAAGGCTGTACAGCTTTACAGAGGACCACCCTCCAGGAGGGGAGCAATGCCAAGCATaGAGTGGCGGAGGTCATAGA | + |
Preference number: 4 (lower is better) Translates to: VLELQRLYSFTEDHPPGGEQCQA*SGGGHR Trigger: TCTATGACCTCCGCCACTTCATGCTTGGCATTGCTC...CCCTCCTGGAGGGTGGTCCTCTGTAAAGCTGTACAGCCTTTGCAGTTCAAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CCA 90 bp | GTGCTTGAACTGCAAAGGCTGTACAGCTTTACAGAGGACCACCCTCCAGGAGGGCCGGGTCACCATAATTaGCCAGCCACCTTTCTCATC | + |
Preference number: 4 (lower is better) Translates to: VLELQRLYSFTEDHPPGGPGHHN*PATFLI Trigger: GATGAGAAAGGTGGCTGGCCAATTATGGTGACCCGG...CCCTCCTGGAGGGTGGTCCTCTGTAAAGCTGTACAGCCTTTGCAGTTCAAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CCA 90 bp | AACACAGCATTTAAAGTGTGCGACGTGCTGCTGAGCTCTGCTGCTGAGCGACACGGCGGAGGTCATAGATaGTCCCGGAGCCAGTATCAT | + |
Preference number: 4 (lower is better) Translates to: NTAFKVCDVLLSSAAERHGGGHR*SRSQYH Trigger: ATGATACTGGCTCCGGGACCATCTATGACCTCCGCC...GTGTCGCTCAGCAGCAGAGCTCAGCAGCACGTCGCACACTTTAAATGCTGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CCA 90 bp | AACACAGCATTTAAAGTGTGCGACGTGCTGCTGAGCTCTGCTGCTGAGCGACACCTTGCCCTTGTGCCATaGCAGAGTACCATCCTGGTT | + |
Preference number: 4 (lower is better) Translates to: NTAFKVCDVLLSSAAERHLALVP*QSTILV Trigger: AACCAGGATGGTACTCTGCCATGGCACAAGGGCAAG...GTGTCGCTCAGCAGCAGAGCTCAGCAGCACGTCGCACACTTTAAATGCTGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR GCA 90 bp | AACACAGCATTTAAAGTGTGCGACGTGCTGCTGAGCTCTGCTGCTGAGCGACACACTTGCAGCAAAGAATaGAGCCATGTGGGCTGTGGT | + |
Preference number: 4 (lower is better) Translates to: NTAFKVCDVLLSSAAERHTCSKE*SHVGCG Trigger: ACCACAGCCCACATGGCTGCATTCTTTGCTGCAAGT...GTGTCGCTCAGCAGCAGAGCTCAGCAGCACGTCGCACACTTTAAATGCTGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
||
CDS-3UTR CCA 90 bp | ACTGACTCCTCTCATCTGAAGACCAGTATGCAAACAGAAAGCAGAAGTCGGGGCGGCGGAGGTCATAGATaGTCCCGGAGCCAGTATCAT | + |
Preference number: 4 (lower is better) Translates to: TDSSHLKTSMQTESRSRGGGGHR*SRSQYH Trigger: ATGATACTGGCTCCGGGACCATCTATGACCTCCGCC...GCCCCGACTTCTGCTTTCTGTTTGCATACTGGTCTTCAGATGAGAGGAGTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
||
CDS-3UTR TCA 90 bp | GTGCTTGAACTGCAAAGGCTGTACAGCTTTACAGAGGACCACCCTCCAGGAGGGTCAAAGTCTTATAGTTaGCCCGAGCTGCCAAACAAC | + |
Preference number: 4 (lower is better) Translates to: VLELQRLYSFTEDHPPGGSKSYS*PELPNN Trigger: GTTGTTTGGCAGCTCGGGTCAACTATAAGACTTTGA...CCCTCCTGGAGGGTGGTCCTCTGTAAAGCTGTACAGCCTTTGCAGTTCAAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR TCA 90 bp | GTGCTTGAACTGCAAAGGCTGTACAGCTTTACAGAGGACCACCCTCCAGGAGGGCCCTTAAAGCTGAACTaGGGAATACATAGTCTTTCG | + |
Preference number: 4 (lower is better) Translates to: VLELQRLYSFTEDHPPGGPLKLN*GIHSLS Trigger: CGAAAGACTATGTATTCCTCAGTTCAGCTTTAAGGG...CCCTCCTGGAGGGTGGTCCTCTGTAAAGCTGTACAGCCTTTGCAGTTCAAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
||
CDS-3UTR GCA 90 bp | TTCTACACACCTCACAGATGTCGTGAGGCTCTTGAACGAAGCCGTTATATACAGCCCAACAACAGGGGGTaGCTTCTGTTGTTCCTGAGG | + |
Preference number: 4 (lower is better) Translates to: FYTPHRCREALERSRYIQPNNRG*LLLFLR Trigger: CCTCAGGAACAACAGAAGGCACCCCCTGTTGTTGGG...CTGTATATAACGGCTTCGTTCAAGAGCCTCACGACATCTGTGAGGTGTGTAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
||
CDS-3UTR GCA 90 bp | GTGCTTGAACTGCAAAGGCTGTACAGCTTTACAGAGGACCACCCTCCAGGAGGGGAATCCCTTCCCTTTTaGAATCAACCTAACCACCTT | + |
Preference number: 4 (lower is better) Translates to: VLELQRLYSFTEDHPPGGESLPF*NQPNHL Trigger: AAGGTGGTTAGGTTGATTGCAAAAGGGAAGGGATTC...CCCTCCTGGAGGGTGGTCCTCTGTAAAGCTGTACAGCCTTTGCAGTTCAAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR GCA 90 bp | GAGACAAATGTGCATGTTCAGATGTTGCTGAAACACCTCGTGTGTGAGAACCACGATGGCTTGCCCTTGTaGCATGGCAGAGTACCATCC | + |
Preference number: 4 (lower is better) Translates to: ETNVHVQMLLKHLVCENHDGLPL*HGRVPS Trigger: GGATGGTACTCTGCCATGGCACAAGGGCAAGCCATC...GTGGTTCTCACACACGAGGTGTTTCAGCAACATCTGAACATGCACATTTGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
||
CDS-3UTR GCA 90 bp | GTTTTCTGGAGGCAAAAATGCATGGGTCCCTGGCAGTGTTCCTCCATACATGCCACGGCTTTAACTCCATaGTGCTCTGACGGAAACTTG | + |
Preference number: 4 (lower is better) Translates to: VFWRQKCMGPWQCSSIHATALTP*CSDGNL Trigger: CAAGTTTCCGTCAGAGCAGCATGGAGTTAAAGCCGT...GGCATGTATGGAGGAACACTGCCAGGGACCCATGCATTTTTGCCTCCAGAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR TCA 90 bp | GTTTTCTGGAGGCAAAAATGCATGGGTCCCTGGCAGTGTTCCTCCATACATGCCTCAAAGTCTTATAGTTaGCCCGAGCTGCCAAACAAC | + |
Preference number: 4 (lower is better) Translates to: VFWRQKCMGPWQCSSIHASKSYS*PELPNN Trigger: GTTGTTTGGCAGCTCGGGTCAACTATAAGACTTTGA...GGCATGTATGGAGGAACACTGCCAGGGACCCATGCATTTTTGCCTCCAGAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
||
CDS-3UTR GCA 90 bp | CATGGCATGAGGACTCTGAAACTCACTTACAGATCTGATGGCACACAGACAGCAGGATCTAGACTTGTCTaGCACACTGGCCATGAAGCA | + |
Preference number: 4 (lower is better) Translates to: HGMRTLKLTYRSDGTQTAGSRLV*HTGHEA Trigger: TGCTTCATGGCCAGTGTGGCAGACAAGTCTAGATCC...TGCTGTCTGTGTGCCATCAGATCTGTAAGTGAGTTTCAGAGTCCTCATGCCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR GCA 90 bp | ACTGACTCCTCTCATCTGAAGACCAGTATGCAAACAGAAAGCAGAAGTCGGGGCACGGCTTTAACTCCATaGTGCTCTGACGGAAACTTG | + |
Preference number: 4 (lower is better) Translates to: TDSSHLKTSMQTESRSRGTALTP*CSDGNL Trigger: CAAGTTTCCGTCAGAGCAGCATGGAGTTAAAGCCGT...GCCCCGACTTCTGCTTTCTGTTTGCATACTGGTCTTCAGATGAGAGGAGTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR GCA 90 bp | GAGACAAATGTGCATGTTCAGATGTTGCTGAAACACCTCGTGTGTGAGAACCACATGGTGCTGAGCAGCTaGAGCTGGTTAATGTGGGTG | + |
Preference number: 4 (lower is better) Translates to: ETNVHVQMLLKHLVCENHMVLSS*SWLMWV Trigger: CACCCACATTAACCAGCTGCAGCTGCTCAGCACCAT...GTGGTTCTCACACACGAGGTGTTTCAGCAACATCTGAACATGCACATTTGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CCA 90 bp | GTGCTTGAACTGCAAAGGCTGTACAGCTTTACAGAGGACCACCCTCCAGGAGGGGGATTGCTTTGTCGCTaGAACACTTATTCCACAAAA | + |
Preference number: 4 (lower is better) Translates to: VLELQRLYSFTEDHPPGGGLLCR*NTYSTK Trigger: TTTTGTGGAATAAGTGTTCCAGCGACAAAGCAATCC...CCCTCCTGGAGGGTGGTCCTCTGTAAAGCTGTACAGCCTTTGCAGTTCAAGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
||
CDS-3UTR CCA 90 bp | TTCTACACACCTCACAGATGTCGTGAGGCTCTTGAACGAAGCCGTTATATACAGCTTGCCCTTGTGCCATaGCAGAGTACCATCCTGGTT | + |
Preference number: 4 (lower is better) Translates to: FYTPHRCREALERSRYIQLALVP*QSTILV Trigger: AACCAGGATGGTACTCTGCCATGGCACAAGGGCAAG...CTGTATATAACGGCTTCGTTCAAGAGCCTCACGACATCTGTGAGGTGTGTAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CCA 90 bp | GTGCTTGAACTGCAAAGGCTGTACAGCTTTACAGAGGACCACCCTCCAGGAGGGAAATTCTTTGAAGATTaGGGACTCATCGATGGTGCT | + |
Preference number: 4 (lower is better) Translates to: VLELQRLYSFTEDHPPGGKFFED*GLIDGA Trigger: AGCACCATCGATGAGTCCCCAATCTTCAAAGAATTT...CCCTCCTGGAGGGTGGTCCTCTGTAAAGCTGTACAGCCTTTGCAGTTCAAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR TCA 90 bp | AACAATTACAAGAACAAACCAGCAGCTTTTGGTAAGAGTCTGTACACCAACAAACTGCCACACTGGCCATaGAGCACCCCTTGGGCACAG | + |
Preference number: 4 (lower is better) Translates to: NNYKNKPAAFGKSLYTNKLPHWP*STPWAQ Trigger: CTGTGCCCAAGGGGTGCTTCATGGCCAGTGTGGCAG...TTTGTTGGTGTACAGACTCTTACCAAAAGCTGCTGGTTTGTTCTTGTAATTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR GCA 90 bp | CGATACCTTTCTAAGCACCTGCCCCGTGGAATGCAACTGTTTCAGAAGACTAACAAGTTCTGGGCCCAATaGCGTAGTATATGTCCCTGT | + |
Preference number: 4 (lower is better) Translates to: RYLSKHLPRGMQLFQKTNKFWAQ*RSICPC Trigger: ACAGGGACATATACTACGGCATTGGGCCCAGAACTT...GTTAGTCTTCTGAAACAGTTGCATTCCACGGGGCAGGTGCTTAGAAAGGTATCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CCA 90 bp | GTTTTCTGGAGGCAAAAATGCATGGGTCCCTGGCAGTGTTCCTCCATACATGCCGTTTGGCTATGTGGTTaGCATAGTGGTTACTTTCAG | + |
Preference number: 4 (lower is better) Translates to: VFWRQKCMGPWQCSSIHAVWLCG*HSGYFQ Trigger: CTGAAAGTAACCACTATGCCAACCACATAGCCAAAC...GGCATGTATGGAGGAACACTGCCAGGGACCCATGCATTTTTGCCTCCAGAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CCA 90 bp | ACTGACTCCTCTCATCTGAAGACCAGTATGCAAACAGAAAGCAGAAGTCGGGGCCTTCTGACTGCTGTTTaGCTATGTGGTTGGCATAGT | + |
Preference number: 4 (lower is better) Translates to: TDSSHLKTSMQTESRSRGLLTAV*LCGWHS Trigger: ACTATGCCAACCACATAGCCAAACAGCAGTCAGAAG...GCCCCGACTTCTGCTTTCTGTTTGCATACTGGTCTTCAGATGAGAGGAGTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR TCA 90 bp | TTCTACACACCTCACAGATGTCGTGAGGCTCTTGAACGAAGCCGTTATATACAGTGCACAGTGAAGAGCTaGTTCTTTTCTGTGGTCTCC | + |
Preference number: 4 (lower is better) Translates to: FYTPHRCREALERSRYIQCTVKS*FFSVVS Trigger: GGAGACCACAGAAAAGAATCAGCTCTTCACTGTGCA...CTGTATATAACGGCTTCGTTCAAGAGCCTCACGACATCTGTGAGGTGTGTAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR GCA 90 bp | GTTTTCTGGAGGCAAAAATGCATGGGTCCCTGGCAGTGTTCCTCCATACATGCCTCTCGGTTAGATTCTTaGTGTAATGACTTAGCCCAT | + |
Preference number: 4 (lower is better) Translates to: VFWRQKCMGPWQCSSIHASRLDS*CNDLAH Trigger: ATGGGCTAAGTCATTACAGCAAGAATCTAACCGAGA...GGCATGTATGGAGGAACACTGCCAGGGACCCATGCATTTTTGCCTCCAGAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CCA 90 bp | GAGACAAATGTGCATGTTCAGATGTTGCTGAAACACCTCGTGTGTGAGAACCACAAGTGCCGAGGAAACTaGATTGCTTTGTCGCTGGAA | + |
Preference number: 4 (lower is better) Translates to: ETNVHVQMLLKHLVCENHKCRGN*IALSLE Trigger: TTCCAGCGACAAAGCAATCCAGTTTCCTCGGCACTT...GTGGTTCTCACACACGAGGTGTTTCAGCAACATCTGAACATGCACATTTGTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CCA 90 bp | CATGGCATGAGGACTCTGAAACTCACTTACAGATCTGATGGCACACAGACAGCACTGTGCAATCTGGATTaGGTAGAAATAGCCTTGAGG | + |
Preference number: 4 (lower is better) Translates to: HGMRTLKLTYRSDGTQTALCNLD*VEIALR Trigger: CCTCAAGGCTATTTCTACCCAATCCAGATTGCACAG...TGCTGTCTGTGTGCCATCAGATCTGTAAGTGAGTTTCAGAGTCCTCATGCCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CCA 90 bp | CATGGCATGAGGACTCTGAAACTCACTTACAGATCTGATGGCACACAGACAGCATACTCCATGAAGTTCTaGGCCCAATGCCGTAGTATA | + |
Preference number: 4 (lower is better) Translates to: HGMRTLKLTYRSDGTQTAYSMKF*AQCRSI Trigger: TATACTACGGCATTGGGCCCAGAACTTCATGGAGTA...TGCTGTCTGTGTGCCATCAGATCTGTAAGTGAGTTTCAGAGTCCTCATGCCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR TCA 90 bp | AACAATTACAAGAACAAACCAGCAGCTTTTGGTAAGAGTCTGTACACCAACAAATTCCCCCGTTGCTATTaGAGCCCCCAACAACAGGGG | + |
Preference number: 4 (lower is better) Translates to: NNYKNKPAAFGKSLYTNKFPRCY*SPQQQG Trigger: CCCCTGTTGTTGGGGGCTTCAATAGCAACGGGGGAA...TTTGTTGGTGTACAGACTCTTACCAAAAGCTGCTGGTTTGTTCTTGTAATTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR TCA 90 bp | GAGACAAATGTGCATGTTCAGATGTTGCTGAAACACCTCGTGTGTGAGAACCACGTCAGGGTGATAAGGTaGTCTCTGTGCATAGACTTT | + |
Preference number: 4 (lower is better) Translates to: ETNVHVQMLLKHLVCENHVRVIR*SLCIDF Trigger: AAAGTCTATGCACAGAGATCACCTTATCACCCTGAC...GTGGTTCTCACACACGAGGTGTTTCAGCAACATCTGAACATGCACATTTGTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR TCA 90 bp | GAGACAAATGTGCATGTTCAGATGTTGCTGAAACACCTCGTGTGTGAGAACCACCTCCACTTATACATTTaGCTCTGTCTCGGACTTCCA | + |
Preference number: 4 (lower is better) Translates to: ETNVHVQMLLKHLVCENHLHLYI*LCLGLP Trigger: TGGAAGTCCGAGACAGAGTCAAATGTATAAGTGGAG...GTGGTTCTCACACACGAGGTGTTTCAGCAACATCTGAACATGCACATTTGTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CCA 90 bp | TTCTACACACCTCACAGATGTCGTGAGGCTCTTGAACGAAGCCGTTATATACAGCTTCTGACTGCTGTTTaGCTATGTGGTTGGCATAGT | + |
Preference number: 4 (lower is better) Translates to: FYTPHRCREALERSRYIQLLTAV*LCGWHS Trigger: ACTATGCCAACCACATAGCCAAACAGCAGTCAGAAG...CTGTATATAACGGCTTCGTTCAAGAGCCTCACGACATCTGTGAGGTGTGTAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CCA 90 bp | TTCTACACACCTCACAGATGTCGTGAGGCTCTTGAACGAAGCCGTTATATACAGCTGTGCAATCTGGATTaGGTAGAAATAGCCTTGAGG | + |
Preference number: 4 (lower is better) Translates to: FYTPHRCREALERSRYIQLCNLD*VEIALR Trigger: CCTCAAGGCTATTTCTACCCAATCCAGATTGCACAG...CTGTATATAACGGCTTCGTTCAAGAGCCTCACGACATCTGTGAGGTGTGTAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CCA 90 bp | AAGTGTCATTATTTGTTCCTAGAAAGGGTGAGGCTTATGTTACCCAACTGTCTCCCGGGTCACCATAATTaGCCAGCCACCTTTCTCATC | + |
Preference number: 4 (lower is better) Translates to: KCHYLFLERVRLMLPNCLPGHHN*PATFLI Trigger: GATGAGAAAGGTGGCTGGCCAATTATGGTGACCCGG...GAGACAGTTGGGTAACATAAGCCTCACCCTTTCTAGGAACAAATAATGACACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR TCA 90 bp | AGGAGGAGGTACCAATGGTCAATTTCAAAGCATCAAGTCTGTCACAAGTTTAGGAGGAAATGCCTCTTCTaGCTGCTGTTTGGCTATGTG | + |
Preference number: 4 (lower is better) Translates to: RRRYQWSISKHQVCHKFRRKCLF*LLFGYV Trigger: CACATAGCCAAACAGCAGTCAGAAGAGGCATTTCCT...CCTAAACTTGTGACAGACTTGATGCTTTGAAATTGACCATTGGTACCTCCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR TCA 90 bp | CATGGCATGAGGACTCTGAAACTCACTTACAGATCTGATGGCACACAGACAGCAAGACATAATGCACAGTaGAGAGCTGATTCTTTTCTG | + |
Preference number: 4 (lower is better) Translates to: HGMRTLKLTYRSDGTQTARHNAQ*RADSFL Trigger: CAGAAAAGAATCAGCTCTTCACTGTGCATTATGTCT...TGCTGTCTGTGTGCCATCAGATCTGTAAGTGAGTTTCAGAGTCCTCATGCCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR TCA 90 bp | GTCTTCGCTTTTATTGCTGAGACAAATGTGCATGTTCAGATGTTGCTGAAACACCATGTGGGCTGTGGTTaGGATGGTAATGTTGTCCAG | + |
Preference number: 4 (lower is better) Translates to: VFAFIAETNVHVQMLLKHHVGCG*DGNVVQ Trigger: CTGGACAACATTACCATCTCAACCACAGCCCACATG...GTGTTTCAGCAACATCTGAACATGCACATTTGTCTCAGCAATAAAAGCGAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR TCA 90 bp | AAGTGTCATTATTTGTTCCTAGAAAGGGTGAGGCTTATGTTACCCAACTGTCTCCATGTGGGCTGTGGTTaGGATGGTAATGTTGTCCAG | + |
Preference number: 4 (lower is better) Translates to: KCHYLFLERVRLMLPNCLHVGCG*DGNVVQ Trigger: CTGGACAACATTACCATCTCAACCACAGCCCACATG...GAGACAGTTGGGTAACATAAGCCTCACCCTTTCTAGGAACAAATAATGACACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR TCA 90 bp | GAGACAAATGTGCATGTTCAGATGTTGCTGAAACACCTCGTGTGTGAGAACCACCCCTTAAAGCTGAACTaGGGAATACATAGTCTTTCG | + |
Preference number: 4 (lower is better) Translates to: ETNVHVQMLLKHLVCENHPLKLN*GIHSLS Trigger: CGAAAGACTATGTATTCCTCAGTTCAGCTTTAAGGG...GTGGTTCTCACACACGAGGTGTTTCAGCAACATCTGAACATGCACATTTGTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR GCA 90 bp | AGGAGGAGGTACCAATGGTCAATTTCAAAGCATCAAGTCTGTCACAAGTTTAGGCCGAGGAAACTGGATTaGTTTGTCGCTGGAACACTT | + |
Preference number: 4 (lower is better) Translates to: RRRYQWSISKHQVCHKFRPRKLD*FVAGTL Trigger: AAGTGTTCCAGCGACAAAGCAATCCAGTTTCCTCGG...CCTAAACTTGTGACAGACTTGATGCTTTGAAATTGACCATTGGTACCTCCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR GCA 90 bp | TTCTACACACCTCACAGATGTCGTGAGGCTCTTGAACGAAGCCGTTATATACAGCTCCCTTTAATGGTGTaGTCATCGTTTATGAGACAG | + |
Preference number: 4 (lower is better) Translates to: FYTPHRCREALERSRYIQLPLMV*SSFMRQ Trigger: CTGTCTCATAAACGATGAGCACACCATTAAAGGGAG...CTGTATATAACGGCTTCGTTCAAGAGCCTCACGACATCTGTGAGGTGTGTAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR GCA 90 bp | AGGAGGAGGTACCAATGGTCAATTTCAAAGCATCAAGTCTGTCACAAGTTTAGGAAGTTCTGGGCCCAATaGCGTAGTATATGTCCCTGT | + |
Preference number: 4 (lower is better) Translates to: RRRYQWSISKHQVCHKFRKFWAQ*RSICPC Trigger: ACAGGGACATATACTACGGCATTGGGCCCAGAACTT...CCTAAACTTGTGACAGACTTGATGCTTTGAAATTGACCATTGGTACCTCCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR GCA 90 bp | AACAATTACAAGAACAAACCAGCAGCTTTTGGTAAGAGTCTGTACACCAACAAAGATGGCTTGCCCTTGTaGCATGGCAGAGTACCATCC | + |
Preference number: 4 (lower is better) Translates to: NNYKNKPAAFGKSLYTNKDGLPL*HGRVPS Trigger: GGATGGTACTCTGCCATGGCACAAGGGCAAGCCATC...TTTGTTGGTGTACAGACTCTTACCAAAAGCTGCTGGTTTGTTCTTGTAATTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CCA 90 bp | GTTTTCTGGAGGCAAAAATGCATGGGTCCCTGGCAGTGTTCCTCCATACATGCCTCTGTGCATAGACTTTaGAATAGCTATGAGAGAATT | + |
Preference number: 4 (lower is better) Translates to: VFWRQKCMGPWQCSSIHASVHRL*NSYERI Trigger: AATTCTCTCATAGCTATTCCAAAGTCTATGCACAGA...GGCATGTATGGAGGAACACTGCCAGGGACCCATGCATTTTTGCCTCCAGAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CCA 90 bp | AGGAGGAGGTACCAATGGTCAATTTCAAAGCATCAAGTCTGTCACAAGTTTAGGAAGAATGCAGCCATGTaGGCTGTGGTTGAGATGGTA | + |
Preference number: 4 (lower is better) Translates to: RRRYQWSISKHQVCHKFRKNAAM*AVVEMV Trigger: TACCATCTCAACCACAGCCCACATGGCTGCATTCTT...CCTAAACTTGTGACAGACTTGATGCTTTGAAATTGACCATTGGTACCTCCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR CAA 72 bp | GCTTTTATTGCTGAGACAAATGTGCATGTTCAGATGTaGCTGAAACACCTCGTGTGTGAGAACCACAGAGGT | + |
Preference number: 4 (lower is better) Translates to: AFIAETNVHVQM*LKHLVCENHRG Trigger: ACCTCTGTGGTTCTCACACACGAGGTGTTTCAGCAACATCTGAACATGCACATTTGTCTCAGCAATAAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR CAA 72 bp | CCAACTTTCCCTCTTCAGTGGAAAAGGACAACCACATaGGTAAGGCACTGGTGTTTGTCACAAAATCAGTTC | + |
Preference number: 4 (lower is better) Translates to: PTFPLQWKRTTT*VRHWCLSQNQF Trigger: GAACTGATTTTGTGACAAACACCAGTGCCTTACCAATGTGGTTGTCCTTTTCCACTGAAGAGGGAAAGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR TCA 90 bp | GAGACAAATGTGCATGTTCAGATGTTGCTGAAACACCTCGTGTGTGAGAACCACAGACATAATGCACAGTaGAGAGCTGATTCTTTTCTG | + |
Preference number: 4 (lower is better) Translates to: ETNVHVQMLLKHLVCENHRHNAQ*RADSFL Trigger: CAGAAAAGAATCAGCTCTTCACTGTGCATTATGTCT...GTGGTTCTCACACACGAGGTGTTTCAGCAACATCTGAACATGCACATTTGTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR TCA 90 bp | ATAATTGAACAAATGCAACAAATGCTCACTCCCTCTCAAGAAATGAACCTATGGGGTAACTGTACTCCATaGAGTTCTGGGCCCAATGCC | + |
Preference number: 4 (lower is better) Translates to: IIEQMQQMLTPSQEMNLWGNCTP*SSGPNA Trigger: GGCATTGGGCCCAGAACTTCATGGAGTACAGTTACC...CCATAGGTTCATTTCTTGAGAGGGAGTGAGCATTTGTTGCATTTGTTCAATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR TCA 90 bp | ATAATTGAACAAATGCAACAAATGCTCACTCCCTCTCAAGAAATGAACCTATGGGAGCAATGCCAAGCATaGAGTGGCGGAGGTCATAGA | + |
Preference number: 4 (lower is better) Translates to: IIEQMQQMLTPSQEMNLWEQCQA*SGGGHR Trigger: TCTATGACCTCCGCCACTTCATGCTTGGCATTGCTC...CCATAGGTTCATTTCTTGAGAGGGAGTGAGCATTTGTTGCATTTGTTCAATTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR GCA 90 bp | AACAATTACAAGAACAAACCAGCAGCTTTTGGTAAGAGTCTGTACACCAACAAAATGGTGCTGAGCAGCTaGAGCTGGTTAATGTGGGTG | + |
Preference number: 4 (lower is better) Translates to: NNYKNKPAAFGKSLYTNKMVLSS*SWLMWV Trigger: CACCCACATTAACCAGCTGCAGCTGCTCAGCACCAT...TTTGTTGGTGTACAGACTCTTACCAAAAGCTGCTGGTTTGTTCTTGTAATTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CCA 90 bp | GAGACAAATGTGCATGTTCAGATGTTGCTGAAACACCTCGTGTGTGAGAACCACAAATTCTTTGAAGATTaGGGACTCATCGATGGTGCT | + |
Preference number: 4 (lower is better) Translates to: ETNVHVQMLLKHLVCENHKFFED*GLIDGA Trigger: AGCACCATCGATGAGTCCCCAATCTTCAAAGAATTT...GTGGTTCTCACACACGAGGTGTTTCAGCAACATCTGAACATGCACATTTGTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
||
3UTR CAA 72 bp | ATGCATCTGACCAGCAGCATGGATAAGTGTCATTATTaGTTCCTAGAAAGGGTGAGGCTTATGTTACCCAAC | + |
Preference number: 4 (lower is better) Translates to: MHLTSSMDKCHY*FLERVRLMLPN Trigger: GTTGGGTAACATAAGCCTCACCCTTTCTAGGAACAAATAATGACACTTATCCATGCTGCTGGTCAGATGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR CAA 72 bp | AGCAAGGAAACAATTACAAGAACAAACCAGCAGCTTTaGGTAAGAGTCTGTACACCAACAAAGACAGAGGCC | + |
Preference number: 4 (lower is better) Translates to: SKETITRTNQQL*VRVCTPTKTEA Trigger: GGCCTCTGTCTTTGTTGGTGTACAGACTCTTACCAAAAGCTGCTGGTTTGTTCTTGTAATTGTTTCCTTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
||
3UTR CAA 72 bp | TCCAGGAGGGCATCCAGTAAACACATTATTGCATATTaGACACATGGCATATACCCCACATGTACAATGGAG | + |
Preference number: 4 (lower is better) Translates to: SRRASSKHIIAY*THGIYPTCTME Trigger: CTCCATTGTACATGTGGGGTATATGCCATGTGTCAAATATGCAATAATGTGTTTACTGGATGCCCTCCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR TCA 90 bp | AGGAGGAGGTACCAATGGTCAATTTCAAAGCATCAAGTCTGTCACAAGTTTAGGCAATCTCTTCATATTTaGGCCCTAACACCTTGCTTC | + |
Preference number: 4 (lower is better) Translates to: RRRYQWSISKHQVCHKFRQSLHI*ALTPCF Trigger: GAAGCAAGGTGTTAGGGCTCAAATATGAAGAGATTG...CCTAAACTTGTGACAGACTTGATGCTTTGAAATTGACCATTGGTACCTCCTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR GCA 90 bp | GTCTTCGCTTTTATTGCTGAGACAAATGTGCATGTTCAGATGTTGCTGAAACACAATGCCTCTTCTGACTaGTGTTTGGCTATGTGGTTG | + |
Preference number: 4 (lower is better) Translates to: VFAFIAETNVHVQMLLKHNASSD*CLAMWL Trigger: CAACCACATAGCCAAACAGCAGTCAGAAGAGGCATT...GTGTTTCAGCAACATCTGAACATGCACATTTGTCTCAGCAATAAAAGCGAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR GCA 90 bp | GAGACAAATGTGCATGTTCAGATGTTGCTGAAACACCTCGTGTGTGAGAACCACTCTGTCCCTGTCTTCTaGTGTTTCATATACTTCTAT | + |
Preference number: 4 (lower is better) Translates to: ETNVHVQMLLKHLVCENHSVPVF*CFIYFY Trigger: ATAGAAGTATATGAAACAGCAGAAGACAGGGACAGA...GTGGTTCTCACACACGAGGTGTTTCAGCAACATCTGAACATGCACATTTGTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR GCA 90 bp | AACAATTACAAGAACAAACCAGCAGCTTTTGGTAAGAGTCTGTACACCAACAAAACTTGCAGCAAAGAATaGAGCCATGTGGGCTGTGGT | + |
Preference number: 4 (lower is better) Translates to: NNYKNKPAAFGKSLYTNKTCSKE*SHVGCG Trigger: ACCACAGCCCACATGGCTGCATTCTTTGCTGCAAGT...TTTGTTGGTGTACAGACTCTTACCAAAAGCTGCTGGTTTGTTCTTGTAATTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR GCA 90 bp | AGGAGGAGGTACCAATGGTCAATTTCAAAGCATCAAGTCTGTCACAAGTTTAGGGCTTTAACTCCATGCTaGTCTGACGGAAACTTGTAT | + |
Preference number: 4 (lower is better) Translates to: RRRYQWSISKHQVCHKFRALTPC*SDGNLY Trigger: ATACAAGTTTCCGTCAGAGCAGCATGGAGTTAAAGC...CCTAAACTTGTGACAGACTTGATGCTTTGAAATTGACCATTGGTACCTCCTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CCA 90 bp | CGATACCTTTCTAAGCACCTGCCCCGTGGAATGCAACTGTTTCAGAAGACTAACTCTGTGCATAGACTTTaGAATAGCTATGAGAGAATT | + |
Preference number: 4 (lower is better) Translates to: RYLSKHLPRGMQLFQKTNSVHRL*NSYERI Trigger: AATTCTCTCATAGCTATTCCAAAGTCTATGCACAGA...GTTAGTCTTCTGAAACAGTTGCATTCCACGGGGCAGGTGCTTAGAAAGGTATCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CCA 90 bp | TTCTACACACCTCACAGATGTCGTGAGGCTCTTGAACGAAGCCGTTATATACAGACCTTCACTGGTTTCTaGAGCAATAAACTGTTTAAC | + |
Preference number: 4 (lower is better) Translates to: FYTPHRCREALERSRYIQTFTGF*SNKLFN Trigger: GTTAAACAGTTTATTGCTCCAGAAACCAGTGAAGGT...CTGTATATAACGGCTTCGTTCAAGAGCCTCACGACATCTGTGAGGTGTGTAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CCA 90 bp | GCTTATGTTACCCAACTGTCTCTATATTATCACACCCTAAACAAAAACCAGAGCAAGAATGCAGCCATGTaGGCTGTGGTTGAGATGGTA | + |
Preference number: 4 (lower is better) Translates to: AYVTQLSLYYHTLNKNQSKNAAM*AVVEMV Trigger: TACCATCTCAACCACAGCCCACATGGCTGCATTCTT...GCTCTGGTTTTTGTTTAGGGTGTGATAATATAGAGACAGTTGGGTAACATAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR TCA 90 bp | ATAATTGAACAAATGCAACAAATGCTCACTCCCTCTCAAGAAATGAACCTATGGAGGAAATGCCTCTTCTaGCTGCTGTTTGGCTATGTG | + |
Preference number: 4 (lower is better) Translates to: IIEQMQQMLTPSQEMNLWRKCLF*LLFGYV Trigger: CACATAGCCAAACAGCAGTCAGAAGAGGCATTTCCT...CCATAGGTTCATTTCTTGAGAGGGAGTGAGCATTTGTTGCATTTGTTCAATTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR TCA 90 bp | GCTTATGTTACCCAACTGTCTCTATATTATCACACCCTAAACAAAAACCAGAGCGTCAGGGTGATAAGGTaGTCTCTGTGCATAGACTTT | + |
Preference number: 4 (lower is better) Translates to: AYVTQLSLYYHTLNKNQSVRVIR*SLCIDF Trigger: AAAGTCTATGCACAGAGATCACCTTATCACCCTGAC...GCTCTGGTTTTTGTTTAGGGTGTGATAATATAGAGACAGTTGGGTAACATAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR TCA 90 bp | AACAATTACAAGAACAAACCAGCAGCTTTTGGTAAGAGTCTGTACACCAACAAATGCACAGTGAAGAGCTaGTTCTTTTCTGTGGTCTCC | + |
Preference number: 4 (lower is better) Translates to: NNYKNKPAAFGKSLYTNKCTVKS*FFSVVS Trigger: GGAGACCACAGAAAAGAATCAGCTCTTCACTGTGCA...TTTGTTGGTGTACAGACTCTTACCAAAAGCTGCTGGTTTGTTCTTGTAATTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR GCA 90 bp | ATAATTGAACAAATGCAACAAATGCTCACTCCCTCTCAAGAAATGAACCTATGGCCGAGGAAACTGGATTaGTTTGTCGCTGGAACACTT | + |
Preference number: 4 (lower is better) Translates to: IIEQMQQMLTPSQEMNLWPRKLD*FVAGTL Trigger: AAGTGTTCCAGCGACAAAGCAATCCAGTTTCCTCGG...CCATAGGTTCATTTCTTGAGAGGGAGTGAGCATTTGTTGCATTTGTTCAATTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR GCA 90 bp | GTCTTCGCTTTTATTGCTGAGACAAATGTGCATGTTCAGATGTTGCTGAAACACGAATCCCTTCCCTTTTaGAATCAACCTAACCACCTT | + |
Preference number: 4 (lower is better) Translates to: VFAFIAETNVHVQMLLKHESLPF*NQPNHL Trigger: AAGGTGGTTAGGTTGATTGCAAAAGGGAAGGGATTC...GTGTTTCAGCAACATCTGAACATGCACATTTGTCTCAGCAATAAAAGCGAAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CCA 90 bp | ATAATTGAACAAATGCAACAAATGCTCACTCCCTCTCAAGAAATGAACCTATGGAAGTGCCGAGGAAACTaGATTGCTTTGTCGCTGGAA | + |
Preference number: 4 (lower is better) Translates to: IIEQMQQMLTPSQEMNLWKCRGN*IALSLE Trigger: TTCCAGCGACAAAGCAATCCAGTTTCCTCGGCACTT...CCATAGGTTCATTTCTTGAGAGGGAGTGAGCATTTGTTGCATTTGTTCAATTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CCA 90 bp | GTCTTCGCTTTTATTGCTGAGACAAATGTGCATGTTCAGATGTTGCTGAAACACAGAGCTAGGTGTGGTTaGATATTCTTCATACCAGTC | + |
Preference number: 4 (lower is better) Translates to: VFAFIAETNVHVQMLLKHRARCG*IFFIPV Trigger: GACTGGTATGAAGAATATCCAACCACACCTAGCTCT...GTGTTTCAGCAACATCTGAACATGCACATTTGTCTCAGCAATAAAAGCGAAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR TCA 90 bp | AGGAGGAGGTACCAATGGTCAATTTCAAAGCATCAAGTCTGTCACAAGTTTAGGATTTCTCTACCCAAGTaGATGGAAGGAAAACTTCAT | + |
Preference number: 4 (lower is better) Translates to: RRRYQWSISKHQVCHKFRISLPK*MEGKLH Trigger: ATGAAGTTTTCCTTCCATTCACTTGGGTAGAGAAAT...CCTAAACTTGTGACAGACTTGATGCTTTGAAATTGACCATTGGTACCTCCTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR TCA 90 bp | AACAATTACAAGAACAAACCAGCAGCTTTTGGTAAGAGTCTGTACACCAACAAACTCCACTTATACATTTaGCTCTGTCTCGGACTTCCA | + |
Preference number: 4 (lower is better) Translates to: NNYKNKPAAFGKSLYTNKLHLYI*LCLGLP Trigger: TGGAAGTCCGAGACAGAGTCAAATGTATAAGTGGAG...TTTGTTGGTGTACAGACTCTTACCAAAAGCTGCTGGTTTGTTCTTGTAATTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR GCA 90 bp | AACAATTACAAGAACAAACCAGCAGCTTTTGGTAAGAGTCTGTACACCAACAAAAATGCCTCTTCTGACTaGTGTTTGGCTATGTGGTTG | + |
Preference number: 4 (lower is better) Translates to: NNYKNKPAAFGKSLYTNKNASSD*CLAMWL Trigger: CAACCACATAGCCAAACAGCAGTCAGAAGAGGCATT...TTTGTTGGTGTACAGACTCTTACCAAAAGCTGCTGGTTTGTTCTTGTAATTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CCA 90 bp | GTCTTCGCTTTTATTGCTGAGACAAATGTGCATGTTCAGATGTTGCTGAAACACGGATTGCTTTGTCGCTaGAACACTTATTCCACAAAA | + |
Preference number: 4 (lower is better) Translates to: VFAFIAETNVHVQMLLKHGLLCR*NTYSTK Trigger: TTTTGTGGAATAAGTGTTCCAGCGACAAAGCAATCC...GTGTTTCAGCAACATCTGAACATGCACATTTGTCTCAGCAATAAAAGCGAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CCA 90 bp | AGGAGGAGGTACCAATGGTCAATTTCAAAGCATCAAGTCTGTCACAAGTTTAGGACCTTCACTGGTTTCTaGAGCAATAAACTGTTTAAC | + |
Preference number: 4 (lower is better) Translates to: RRRYQWSISKHQVCHKFRTFTGF*SNKLFN Trigger: GTTAAACAGTTTATTGCTCCAGAAACCAGTGAAGGT...CCTAAACTTGTGACAGACTTGATGCTTTGAAATTGACCATTGGTACCTCCTCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CCA 90 bp | AACAATTACAAGAACAAACCAGCAGCTTTTGGTAAGAGTCTGTACACCAACAAATACTCCATGAAGTTCTaGGCCCAATGCCGTAGTATA | + |
Preference number: 4 (lower is better) Translates to: NNYKNKPAAFGKSLYTNKYSMKF*AQCRSI Trigger: TATACTACGGCATTGGGCCCAGAACTTCATGGAGTA...TTTGTTGGTGTACAGACTCTTACCAAAAGCTGCTGGTTTGTTCTTGTAATTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR CAA 72 bp | TTTGCTGTATATAAAACTAACATGTGCACATTGTGCTaGAACTGCAAAGGCTGTACAGCTTTACAGAGGACC | + |
Preference number: 4 (lower is better) Translates to: FAVYKTNMCTLC*NCKGCTALQRT Trigger: GGTCCTCTGTAAAGCTGTACAGCCTTTGCAGTTCAAGCACAATGTGCACATGTTAGTTTTATATACAGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR GCA 90 bp | ATAATTGAACAAATGCAACAAATGCTCACTCCCTCTCAAGAAATGAACCTATGGCTCCCTTTAATGGTGTaGTCATCGTTTATGAGACAG | + |
Preference number: 4 (lower is better) Translates to: IIEQMQQMLTPSQEMNLWLPLMV*SSFMRQ Trigger: CTGTCTCATAAACGATGAGCACACCATTAAAGGGAG...CCATAGGTTCATTTCTTGAGAGGGAGTGAGCATTTGTTGCATTTGTTCAATTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR GCA 90 bp | AAGTGTCATTATTTGTTCCTAGAAAGGGTGAGGCTTATGTTACCCAACTGTCTCTCTGTCCCTGTCTTCTaGTGTTTCATATACTTCTAT | + |
Preference number: 4 (lower is better) Translates to: KCHYLFLERVRLMLPNCLSVPVF*CFIYFY Trigger: ATAGAAGTATATGAAACAGCAGAAGACAGGGACAGA...GAGACAGTTGGGTAACATAAGCCTCACCCTTTCTAGGAACAAATAATGACACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR GCA 90 bp | ATAATTGAACAAATGCAACAAATGCTCACTCCCTCTCAAGAAATGAACCTATGGGCTTTAACTCCATGCTaGTCTGACGGAAACTTGTAT | + |
Preference number: 4 (lower is better) Translates to: IIEQMQQMLTPSQEMNLWALTPC*SDGNLY Trigger: ATACAAGTTTCCGTCAGAGCAGCATGGAGTTAAAGC...CCATAGGTTCATTTCTTGAGAGGGAGTGAGCATTTGTTGCATTTGTTCAATTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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3UTR CAA 72 bp | AGACCGTTTCATAAAACACAGCATGTCTGTGACTTCTaGTGCAGTCAACAAGTTTCATTTCAGTTGTGCTTA | + |
Preference number: 4 (lower is better) Translates to: RPFHKTQHVCDF*CSQQVSFQLCL Trigger: TAAGCACAACTGAAATGAAACTTGTTGACTGCACAAGAAGTCACAGACATGCTGTGTTTTATGAAACGGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR GCA 90 bp | ATAATTGAACAAATGCAACAAATGCTCACTCCCTCTCAAGAAATGAACCTATGGTCTCGGTTAGATTCTTaGTGTAATGACTTAGCCCAT | + |
Preference number: 4 (lower is better) Translates to: IIEQMQQMLTPSQEMNLWSRLDS*CNDLAH Trigger: ATGGGCTAAGTCATTACAGCAAGAATCTAACCGAGA...CCATAGGTTCATTTCTTGAGAGGGAGTGAGCATTTGTTGCATTTGTTCAATTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS TCA 90 bp | TGGTGTGATAGTCCCAGCGGGCCAGGTTGGGAGCAATGCCAAGCATaGAGTGGCGGAGGTCATAGATGGTCCCGGAGCCAGTATCATACA | + |
Preference number: 5 (lower is better) Translates to: WCDSPSGPGWEQCQA*SGGGHRWSRSQYHT Trigger: TGTATGATACTGGCTCCGGGACCATCTATGACCTCCGCCACTTCATGCTTGGCATTGCTCCCAACCTGGCCCGCTGGGACTATCACACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | TTCTACACACCTCACAGATGTCGTGAGGCTCTTGAACGAAGCCGTTATATACAGTCCCAGCGGGCCAGGTaGGGAGCAATGCCAAGCATG | + |
Preference number: 5 (lower is better) Translates to: FYTPHRCREALERSRYIQSQRAR*GAMPSM Trigger: CATGCTTGGCATTGCTCCCAACCTGGCCCGCTGGGA...CTGTATATAACGGCTTCGTTCAAGAGCCTCACGACATCTGTGAGGTGTGTAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | CATGGCATGAGGACTCTGAAACTCACTTACAGATCTGATGGCACACAGACAGCACTTCCCCCGTTGCTATaGAAGCCCCCAACAACAGGG | + |
Preference number: 5 (lower is better) Translates to: HGMRTLKLTYRSDGTQTALPPLL*KPPTTG Trigger: CCCTGTTGTTGGGGGCTTCAATAGCAACGGGGGAAG...TGCTGTCTGTGTGCCATCAGATCTGTAAGTGAGTTTCAGAGTCCTCATGCCATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | AACACAGCATTTAAAGTGTGCGACGTGCTGCTGAGCTCTGCTGCTGAGCGACACTCACTAGCCAGTCACTaGCAGCAAAGAATGCAGCCA | + |
Preference number: 5 (lower is better) Translates to: NTAFKVCDVLLSSAAERHSLASH*QQRMQP Trigger: TGGCTGCATTCTTTGCTGCAAGTGACTGGCTAGTGA...GTGTCGCTCAGCAGCAGAGCTCAGCAGCACGTCGCACACTTTAAATGCTGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS CCA 90 bp | TGGTTCCTCACTAGCCAGTCACTTGCAGCAAAGAATGCAGCCATGTaGGCTGTGGTTGAGATGGTAATGTTGTCCAGGAATCCCTTCCCT | + |
Preference number: 5 (lower is better) Translates to: WFLTSQSLAAKNAAM*AVVEMVMLSRNPFP Trigger: AGGGAAGGGATTCCTGGACAACATTACCATCTCAACCACAGCCCACATGGCTGCATTCTTTGCTGCAAGTGACTGGCTAGTGAGGAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | GTGCTTGAACTGCAAAGGCTGTACAGCTTTACAGAGGACCACCCTCCAGGAGGGGGAAACTGGATTGCTTaGTCGCTGGAACACTTATTC | + |
Preference number: 5 (lower is better) Translates to: VLELQRLYSFTEDHPPGGGNWIA*SLEHLF Trigger: GAATAAGTGTTCCAGCGACAAAGCAATCCAGTTTCC...CCCTCCTGGAGGGTGGTCCTCTGTAAAGCTGTACAGCCTTTGCAGTTCAAGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | CGATACCTTTCTAAGCACCTGCCCCGTGGAATGCAACTGTTTCAGAAGACTAACAGGGGGTGCCTTCTGTaGTTCCTGAGGAAATGCCTC | + |
Preference number: 5 (lower is better) Translates to: RYLSKHLPRGMQLFQKTNRGCLL*FLRKCL Trigger: GAGGCATTTCCTCAGGAACAACAGAAGGCACCCCCT...GTTAGTCTTCTGAAACAGTTGCATTCCACGGGGCAGGTGCTTAGAAAGGTATCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | CGATACCTTTCTAAGCACCTGCCCCGTGGAATGCAACTGTTTCAGAAGACTAACACCTTGCTTCCCCCGTaGCTATTGAAGCCCCCAACA | + |
Preference number: 5 (lower is better) Translates to: RYLSKHLPRGMQLFQKTNTLLPP*LLKPPT Trigger: TGTTGGGGGCTTCAATAGCAACGGGGGAAGCAAGGT...GTTAGTCTTCTGAAACAGTTGCATTCCACGGGGCAGGTGCTTAGAAAGGTATCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | ACTGACTCCTCTCATCTGAAGACCAGTATGCAAACAGAAAGCAGAAGTCGGGGCTTGAGCCCTAACACCTaGCTTCCCCCGTTGCTATTG | + |
Preference number: 5 (lower is better) Translates to: TDSSHLKTSMQTESRSRGLSPNT*LPPLLL Trigger: CAATAGCAACGGGGGAAGCAAGGTGTTAGGGCTCAA...GCCCCGACTTCTGCTTTCTGTTTGCATACTGGTCTTCAGATGAGAGGAGTCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | CGATACCTTTCTAAGCACCTGCCCCGTGGAATGCAACTGTTTCAGAAGACTAACTGGGTAGAAATAGCCTaGAGGCCCCCACTGGGTAGA | + |
Preference number: 5 (lower is better) Translates to: RYLSKHLPRGMQLFQKTNWVEIA*RPPLGR Trigger: TCTACCCAGTGGGGGCCTCAAGGCTATTTCTACCCA...GTTAGTCTTCTGAAACAGTTGCATTCCACGGGGCAGGTGCTTAGAAAGGTATCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | GTTTTCTGGAGGCAAAAATGCATGGGTCCCTGGCAGTGTTCCTCCATACATGCCTCACTAGCCAGTCACTaGCAGCAAAGAATGCAGCCA | + |
Preference number: 5 (lower is better) Translates to: VFWRQKCMGPWQCSSIHASLASH*QQRMQP Trigger: TGGCTGCATTCTTTGCTGCAAGTGACTGGCTAGTGA...GGCATGTATGGAGGAACACTGCCAGGGACCCATGCATTTTTGCCTCCAGAAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | CATGGCATGAGGACTCTGAAACTCACTTACAGATCTGATGGCACACAGACAGCAAGAGATGGCTTGCCCTaGTGCCATGGCAGAGTACCA | + |
Preference number: 5 (lower is better) Translates to: HGMRTLKLTYRSDGTQTARDGLP*CHGRVP Trigger: TGGTACTCTGCCATGGCACAAGGGCAAGCCATCTCT...TGCTGTCTGTGTGCCATCAGATCTGTAAGTGAGTTTCAGAGTCCTCATGCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | AGGAGGAGGTACCAATGGTCAATTTCAAAGCATCAAGTCTGTCACAAGTTTAGGTCCCAGCGGGCCAGGTaGGGAGCAATGCCAAGCATG | + |
Preference number: 5 (lower is better) Translates to: RRRYQWSISKHQVCHKFRSQRAR*GAMPSM Trigger: CATGCTTGGCATTGCTCCCAACCTGGCCCGCTGGGA...CCTAAACTTGTGACAGACTTGATGCTTTGAAATTGACCATTGGTACCTCCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS TCA 90 bp | TCCTTTCCTGAGGTCAGTGACCAGGTCTCTGGTAACTGTACTCCATaGAGTTCTGGGCCCAATGCCGTAGTATATGTCCCTGTCTCTGAA | + |
Preference number: 5 (lower is better) Translates to: SFPEVSDQVSGNCTP*SSGPNAVVYVPVSE Trigger: TTCAGAGACAGGGACATATACTACGGCATTGGGCCCAGAACTTCATGGAGTACAGTTACCAGAGACCTGGTCACTGACCTCAGGAAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | AACACAGCATTTAAAGTGTGCGACGTGCTGCTGAGCTCTGCTGCTGAGCGACACACTGTGCAATCTGGATaGGGTAGAAATAGCCTTGAG | + |
Preference number: 5 (lower is better) Translates to: NTAFKVCDVLLSSAAERHTVQSG*GRNSLE Trigger: CTCAAGGCTATTTCTACCCAATCCAGATTGCACAGT...GTGTCGCTCAGCAGCAGAGCTCAGCAGCACGTCGCACACTTTAAATGCTGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | TTCTACACACCTCACAGATGTCGTGAGGCTCTTGAACGAAGCCGTTATATACAGGCCATGAAGCACCCCTaGGGCACAGTCCATTCATTA | + |
Preference number: 5 (lower is better) Translates to: FYTPHRCREALERSRYIQAMKHP*GTVHSL Trigger: TAATGAATGGACTGTGCCCAAGGGGTGCTTCATGGC...CTGTATATAACGGCTTCGTTCAAGAGCCTCACGACATCTGTGAGGTGTGTAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS TCA 90 bp | AACAACAGGGGGTGCCTTCTGTTGTTCCTGAGGAAATGCCTCTTCTaGCTGCTGTTTGGCTATGTGGTTGGCATAGTGGTTACTTTCAGA | + |
Preference number: 5 (lower is better) Translates to: NNRGCLLLFLRKCLF*LLFGYVVGIVVTFR Trigger: TCTGAAAGTAACCACTATGCCAACCACATAGCCAAACAGCAGTCAGAAGAGGCATTTCCTCAGGAACAACAGAAGGCACCCCCTGTTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | ACTGACTCCTCTCATCTGAAGACCAGTATGCAAACAGAAAGCAGAAGTCGGGGCACTCCACTTATACATTaGACTCTGTCTCGGACTTCC | + |
Preference number: 5 (lower is better) Translates to: TDSSHLKTSMQTESRSRGTPLIH*TLSRTS Trigger: GGAAGTCCGAGACAGAGTCAAATGTATAAGTGGAGT...GCCCCGACTTCTGCTTTCTGTTTGCATACTGGTCTTCAGATGAGAGGAGTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS CCA 90 bp | GCCTTTAAGGTAGCTTTTCCACCTCTTGACAAATTCTTTGAAGATTaGGGACTCATCGATGGTGCTGAGCAGCTGCAGCTGGTTAATGTG | + |
Preference number: 5 (lower is better) Translates to: AFKVAFPPLDKFFED*GLIDGAEQLQLVNV Trigger: CACATTAACCAGCTGCAGCTGCTCAGCACCATCGATGAGTCCCCAATCTTCAAAGAATTTGTCAAGAGGTGGAAAAGCTACCTTAAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
||
CDS-3UTR CAA 90 bp | GTCTTCGCTTTTATTGCTGAGACAAATGTGCATGTTCAGATGTTGCTGAAACACACCTTGCTTCCCCCGTaGCTATTGAAGCCCCCAACA | + |
Preference number: 5 (lower is better) Translates to: VFAFIAETNVHVQMLLKHTLLPP*LLKPPT Trigger: TGTTGGGGGCTTCAATAGCAACGGGGGAAGCAAGGT...GTGTTTCAGCAACATCTGAACATGCACATTTGTCTCAGCAATAAAAGCGAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | CATGGCATGAGGACTCTGAAACTCACTTACAGATCTGATGGCACACAGACAGCAAACCTAACCACCTTTTaGGGCATGATTTTGGTTGGC | + |
Preference number: 5 (lower is better) Translates to: HGMRTLKLTYRSDGTQTANLTTF*GMILVG Trigger: GCCAACCAAAATCATGCCCAAAAAGGTGGTTAGGTT...TGCTGTCTGTGTGCCATCAGATCTGTAAGTGAGTTTCAGAGTCCTCATGCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | GAGACAAATGTGCATGTTCAGATGTTGCTGAAACACCTCGTGTGTGAGAACCACGTTGAGATGGTAATGTaGTCCAGGAATCCCTTCCCT | + |
Preference number: 5 (lower is better) Translates to: ETNVHVQMLLKHLVCENHVEMVM*SRNPFP Trigger: AGGGAAGGGATTCCTGGACAACATTACCATCTCAAC...GTGGTTCTCACACACGAGGTGTTTCAGCAACATCTGAACATGCACATTTGTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
||
CDS GCA 90 bp | TCCATCCACTCTGAATCCACTACTCAAGTGCCGAGGAAACTGGATTaGTTTGTCGCTGGAACACTTATTCCACAAAAGTACTGTGACCAA | + |
Preference number: 5 (lower is better) Translates to: SIHSESTTQVPRKLD*FVAGTLIPQKYCDQ Trigger: TTGGTCACAGTACTTTTGTGGAATAAGTGTTCCAGCGACAAAGCAATCCAGTTTCCTCGGCACTTGAGTAGTGGATTCAGAGTGGATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | AACAATTACAAGAACAAACCAGCAGCTTTTGGTAAGAGTCTGTACACCAACAAACTTCCCCCGTTGCTATaGAAGCCCCCAACAACAGGG | + |
Preference number: 5 (lower is better) Translates to: NNYKNKPAAFGKSLYTNKLPPLL*KPPTTG Trigger: CCCTGTTGTTGGGGGCTTCAATAGCAACGGGGGAAG...TTTGTTGGTGTACAGACTCTTACCAAAAGCTGCTGGTTTGTTCTTGTAATTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
||
CDS-3UTR CAA 90 bp | TTCTACACACCTCACAGATGTCGTGAGGCTCTTGAACGAAGCCGTTATATACAGAACCTAACCACCTTTTaGGGCATGATTTTGGTTGGC | + |
Preference number: 5 (lower is better) Translates to: FYTPHRCREALERSRYIQNLTTF*GMILVG Trigger: GCCAACCAAAATCATGCCCAAAAAGGTGGTTAGGTT...CTGTATATAACGGCTTCGTTCAAGAGCCTCACGACATCTGTGAGGTGTGTAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS GCA 90 bp | TCATACCAGTCATGTTTATTCATGAACACGGCTTTAACTCCATGCTaGTCTGACGGAAACTTGTATGGGGCTGTTGCCCTTAAAGCTGAA | + |
Preference number: 5 (lower is better) Translates to: SYQSCLFMNTALTPC*SDGNLYGAVALKAE Trigger: TTCAGCTTTAAGGGCAACAGCCCCATACAAGTTTCCGTCAGAGCAGCATGGAGTTAAAGCCGTGTTCATGAATAAACATGACTGGTATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
||
CDS GCA 90 bp | TCTTCATACCAGTCATGTTTATTCATGAACACGGCTTTAACTCCATaGTGCTCTGACGGAAACTTGTATGGGGCTGTTGCCCTTAAAGCT | + |
Preference number: 5 (lower is better) Translates to: SSYQSCLFMNTALTP*CSDGNLYGAVALKA Trigger: AGCTTTAAGGGCAACAGCCCCATACAAGTTTCCGTCAGAGCAGCATGGAGTTAAAGCCGTGTTCATGAATAAACATGACTGGTATGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS CCA 90 bp | TCTAATCCATCCACTCTGAATCCACTACTCAAGTGCCGAGGAAACTaGATTGCTTTGTCGCTGGAACACTTATTCCACAAAAGTACTGTG | + |
Preference number: 5 (lower is better) Translates to: SNPSTLNPLLKCRGN*IALSLEHLFHKSTV Trigger: CACAGTACTTTTGTGGAATAAGTGTTCCAGCGACAAAGCAATCCAGTTTCCTCGGCACTTGAGTAGTGGATTCAGAGTGGATGGATTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | GCTTATGTTACCCAACTGTCTCTATATTATCACACCCTAAACAAAAACCAGAGCGCCGAGGAAACTGGATaGCTTTGTCGCTGGAACACT | + |
Preference number: 5 (lower is better) Translates to: AYVTQLSLYYHTLNKNQSAEETG*LCRWNT Trigger: AGTGTTCCAGCGACAAAGCAATCCAGTTTCCTCGGC...GCTCTGGTTTTTGTTTAGGGTGTGATAATATAGAGACAGTTGGGTAACATAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | AACAATTACAAGAACAAACCAGCAGCTTTTGGTAAGAGTCTGTACACCAACAAATGGGTAGAAATAGCCTaGAGGCCCCCACTGGGTAGA | + |
Preference number: 5 (lower is better) Translates to: NNYKNKPAAFGKSLYTNKWVEIA*RPPLGR Trigger: TCTACCCAGTGGGGGCCTCAAGGCTATTTCTACCCA...TTTGTTGGTGTACAGACTCTTACCAAAAGCTGCTGGTTTGTTCTTGTAATTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | GCTTATGTTACCCAACTGTCTCTATATTATCACACCCTAAACAAAAACCAGAGCGCCATGAAGCACCCCTaGGGCACAGTCCATTCATTA | + |
Preference number: 5 (lower is better) Translates to: AYVTQLSLYYHTLNKNQSAMKHP*GTVHSL Trigger: TAATGAATGGACTGTGCCCAAGGGGTGCTTCATGGC...GCTCTGGTTTTTGTTTAGGGTGTGATAATATAGAGACAGTTGGGTAACATAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | ATAATTGAACAAATGCAACAAATGCTCACTCCCTCTCAAGAAATGAACCTATGGAGAGATGGCTTGCCCTaGTGCCATGGCAGAGTACCA | + |
Preference number: 5 (lower is better) Translates to: IIEQMQQMLTPSQEMNLWRDGLP*CHGRVP Trigger: TGGTACTCTGCCATGGCACAAGGGCAAGCCATCTCT...CCATAGGTTCATTTCTTGAGAGGGAGTGAGCATTTGTTGCATTTGTTCAATTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | GCTTATGTTACCCAACTGTCTCTATATTATCACACCCTAAACAAAAACCAGAGCTGCTCTGACGGAAACTaGTATGGGGCTGTTGCCCTT | + |
Preference number: 5 (lower is better) Translates to: AYVTQLSLYYHTLNKNQSCSDGN*YGAVAL Trigger: AAGGGCAACAGCCCCATACAAGTTTCCGTCAGAGCA...GCTCTGGTTTTTGTTTAGGGTGTGATAATATAGAGACAGTTGGGTAACATAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | ATAATTGAACAAATGCAACAAATGCTCACTCCCTCTCAAGAAATGAACCTATGGGCCGAGGAAACTGGATaGCTTTGTCGCTGGAACACT | + |
Preference number: 5 (lower is better) Translates to: IIEQMQQMLTPSQEMNLWAEETG*LCRWNT Trigger: AGTGTTCCAGCGACAAAGCAATCCAGTTTCCTCGGC...CCATAGGTTCATTTCTTGAGAGGGAGTGAGCATTTGTTGCATTTGTTCAATTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | AACAATTACAAGAACAAACCAGCAGCTTTTGGTAAGAGTCTGTACACCAACAAATTGAGCCCTAACACCTaGCTTCCCCCGTTGCTATTG | + |
Preference number: 5 (lower is better) Translates to: NNYKNKPAAFGKSLYTNKLSPNT*LPPLLL Trigger: CAATAGCAACGGGGGAAGCAAGGTGTTAGGGCTCAA...TTTGTTGGTGTACAGACTCTTACCAAAAGCTGCTGGTTTGTTCTTGTAATTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | TTCTACACACCTCACAGATGTCGTGAGGCTCTTGAACGAAGCCGTTATATACAGTCAATCTCTTCATATTaGAGCCCTAACACCTTGCTT | + |
Preference number: 5 (lower is better) Translates to: FYTPHRCREALERSRYIQSISSY*SPNTLL Trigger: AAGCAAGGTGTTAGGGCTCAAATATGAAGAGATTGA...CTGTATATAACGGCTTCGTTCAAGAGCCTCACGACATCTGTGAGGTGTGTAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | AACAATTACAAGAACAAACCAGCAGCTTTTGGTAAGAGTCTGTACACCAACAAATGCTCTGACGGAAACTaGTATGGGGCTGTTGCCCTT | + |
Preference number: 5 (lower is better) Translates to: NNYKNKPAAFGKSLYTNKCSDGN*YGAVAL Trigger: AAGGGCAACAGCCCCATACAAGTTTCCGTCAGAGCA...TTTGTTGGTGTACAGACTCTTACCAAAAGCTGCTGGTTTGTTCTTGTAATTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS GCA 90 bp | AATGGAAGGAAAACTTCATTCCCCTCTCGTCTCCCTTTAATGGTGTaGTCATCGTTTATGAGACAGTCAATCTCTTCATATTTGAGCCCT | + |
Preference number: 5 (lower is better) Translates to: NGRKTSFPSRLPLMV*SSFMRQSISSYLSP Trigger: AGGGCTCAAATATGAAGAGATTGACTGTCTCATAAACGATGAGCACACCATTAAAGGGAGACGAGAGGGGAATGAAGTTTTCCTTCCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS GCA 90 bp | CTGTTTCATATACTTCTATGTGAGGGGGTTTCTCGGTTAGATTCTTaGTGTAATGACTTAGCCCATACTGTGCAATCTGGATTGGGTAGA | + |
Preference number: 5 (lower is better) Translates to: LFHILLCEGVSRLDS*CNDLAHTVQSGLGR Trigger: TCTACCCAATCCAGATTGCACAGTATGGGCTAAGTCATTACAGCAAGAATCTAACCGAGAAACCCCCTCACATAGAAGTATATGAAACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | AAGTGTCATTATTTGTTCCTAGAAAGGGTGAGGCTTATGTTACCCAACTGTCTCACTCCACTTATACATTaGACTCTGTCTCGGACTTCC | + |
Preference number: 5 (lower is better) Translates to: KCHYLFLERVRLMLPNCLTPLIH*TLSRTS Trigger: GGAAGTCCGAGACAGAGTCAAATGTATAAGTGGAGT...GAGACAGTTGGGTAACATAAGCCTCACCCTTTCTAGGAACAAATAATGACACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | AAGTGTCATTATTTGTTCCTAGAAAGGGTGAGGCTTATGTTACCCAACTGTCTCACTGTGCAATCTGGATaGGGTAGAAATAGCCTTGAG | + |
Preference number: 5 (lower is better) Translates to: KCHYLFLERVRLMLPNCLTVQSG*GRNSLE Trigger: CTCAAGGCTATTTCTACCCAATCCAGATTGCACAGT...GAGACAGTTGGGTAACATAAGCCTCACCCTTTCTAGGAACAAATAATGACACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | AGGAGGAGGTACCAATGGTCAATTTCAAAGCATCAAGTCTGTCACAAGTTTAGGTTTTTGGGCATGATTTaGGTTGGCTTGACAGCTTTT | + |
Preference number: 5 (lower is better) Translates to: RRRYQWSISKHQVCHKFRFLGMI*VGLTAF Trigger: AAAAGCTGTCAAGCCAACCAAAATCATGCCCAAAAA...CCTAAACTTGTGACAGACTTGATGCTTTGAAATTGACCATTGGTACCTCCTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | AACAATTACAAGAACAAACCAGCAGCTTTTGGTAAGAGTCTGTACACCAACAAAGTTGAGATGGTAATGTaGTCCAGGAATCCCTTCCCT | + |
Preference number: 5 (lower is better) Translates to: NNYKNKPAAFGKSLYTNKVEMVM*SRNPFP Trigger: AGGGAAGGGATTCCTGGACAACATTACCATCTCAAC...TTTGTTGGTGTACAGACTCTTACCAAAAGCTGCTGGTTTGTTCTTGTAATTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS TCA 90 bp | ATTGTAGCCTTCAAAGGACATAAACACACCGTCAGGGTGATAAGGTaGTCTCTGTGCATAGACTTTGGAATAGCTATGAGAGAATTCAAA | + |
Preference number: 5 (lower is better) Translates to: IVAFKGHKHTVRVIR*SLCIDFGIAMREFK Trigger: TTTGAATTCTCTCATAGCTATTCCAAAGTCTATGCACAGAGATCACCTTATCACCCTGACGGTGTGTTTATGTCCTTTGAAGGCTACAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | ATAATTGAACAAATGCAACAAATGCTCACTCCCTCTCAAGAAATGAACCTATGGGGAAACTGGATTGCTTaGTCGCTGGAACACTTATTC | + |
Preference number: 5 (lower is better) Translates to: IIEQMQQMLTPSQEMNLWGNWIA*SLEHLF Trigger: GAATAAGTGTTCCAGCGACAAAGCAATCCAGTTTCC...CCATAGGTTCATTTCTTGAGAGGGAGTGAGCATTTGTTGCATTTGTTCAATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | GTCTTCGCTTTTATTGCTGAGACAAATGTGCATGTTCAGATGTTGCTGAAACACTCAATCTCTTCATATTaGAGCCCTAACACCTTGCTT | + |
Preference number: 5 (lower is better) Translates to: VFAFIAETNVHVQMLLKHSISSY*SPNTLL Trigger: AAGCAAGGTGTTAGGGCTCAAATATGAAGAGATTGA...GTGTTTCAGCAACATCTGAACATGCACATTTGTCTCAGCAATAAAAGCGAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | AAGTGTCATTATTTGTTCCTAGAAAGGGTGAGGCTTATGTTACCCAACTGTCTCTTTTTGGGCATGATTTaGGTTGGCTTGACAGCTTTT | + |
Preference number: 5 (lower is better) Translates to: KCHYLFLERVRLMLPNCLFLGMI*VGLTAF Trigger: AAAAGCTGTCAAGCCAACCAAAATCATGCCCAAAAA...GAGACAGTTGGGTAACATAAGCCTCACCCTTTCTAGGAACAAATAATGACACTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | GCTTATGTTACCCAACTGTCTCTATATTATCACACCCTAAACAAAAACCAGAGCCTCTTGACAAATTCTTaGAAGATTGGGGACTCATCG | + |
Preference number: 5 (lower is better) Translates to: AYVTQLSLYYHTLNKNQSLLTNS*KIGDSS Trigger: CGATGAGTCCCCAATCTTCAAAGAATTTGTCAAGAG...GCTCTGGTTTTTGTTTAGGGTGTGATAATATAGAGACAGTTGGGTAACATAAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | AACAATTACAAGAACAAACCAGCAGCTTTTGGTAAGAGTCTGTACACCAACAAACTCTTGACAAATTCTTaGAAGATTGGGGACTCATCG | + |
Preference number: 5 (lower is better) Translates to: NNYKNKPAAFGKSLYTNKLLTNS*KIGDSS Trigger: CGATGAGTCCCCAATCTTCAAAGAATTTGTCAAGAG...TTTGTTGGTGTACAGACTCTTACCAAAAGCTGCTGGTTTGTTCTTGTAATTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | GCTTATGTTACCCAACTGTCTCTATATTATCACACCCTAAACAAAAACCAGAGCATGATTTTGGTTGGCTaGACAGCTTTTGTGTTAGAA | + |
Preference number: 5 (lower is better) Translates to: AYVTQLSLYYHTLNKNQSMILVG*TAFVLE Trigger: TTCTAACACAAAAGCTGTCAAGCCAACCAAAATCAT...GCTCTGGTTTTTGTTTAGGGTGTGATAATATAGAGACAGTTGGGTAACATAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS-3UTR CAA 90 bp | AACAATTACAAGAACAAACCAGCAGCTTTTGGTAAGAGTCTGTACACCAACAAAATGATTTTGGTTGGCTaGACAGCTTTTGTGTTAGAA | + |
Preference number: 5 (lower is better) Translates to: NNYKNKPAAFGKSLYTNKMILVG*TAFVLE Trigger: TTCTAACACAAAAGCTGTCAAGCCAACCAAAATCAT...TTTGTTGGTGTACAGACTCTTACCAAAAGCTGCTGGTTTGTTCTTGTAATTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS TCA 72 bp | AGTCCCAGCGGGCCAGGTTGGGAGCAATGCCAAGCATaGAGTGGCGGAGGTCATAGATGGTCCCGGAGCCAG | + |
Preference number: 6 (lower is better) Translates to: SPSGPGWEQCQA*SGGGHRWSRSQ Trigger: CTGGCTCCGGGACCATCTATGACCTCCGCCACTTCATGCTTGGCATTGCTCCCAACCTGGCCCGCTGGGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS TCA 72 bp | AAGCCCCCAACAACAGGGGGTGCCTTCTGTTGTTCCTaGGGAAATGCCTCTTCTGACTGCTGTTTGGCTATG | + |
Preference number: 6 (lower is better) Translates to: KPPTTGGAFCCS*GNASSDCCLAM Trigger: CATAGCCAAACAGCAGTCAGAAGAGGCATTTCCTCAGGAACAACAGAAGGCACCCCCTGTTGTTGGGGGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS CAA 72 bp | CACCTTTCTCATCCTGGTTCCTCACTAGCCAGTCACTaGCAGCAAAGAATGCAGCCATGTGGGCTGTGGTTG | + |
Preference number: 6 (lower is better) Translates to: HLSHPGSSLASH*QQRMQPCGLWL Trigger: CAACCACAGCCCACATGGCTGCATTCTTTGCTGCAAGTGACTGGCTAGTGAGGAACCAGGATGAGAAAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS TCA 72 bp | GAGGTCAGTGACCAGGTCTCTGGTAACTGTACTCCATaGAGTTCTGGGCCCAATGCCGTAGTATATGTCCCT | + |
Preference number: 6 (lower is better) Translates to: EVSDQVSGNCTP*SSGPNAVVYVP Trigger: AGGGACATATACTACGGCATTGGGCCCAGAACTTCATGGAGTACAGTTACCAGAGACCTGGTCACTGACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS TCA 72 bp | GGGTGCCTTCTGTTGTTCCTGAGGAAATGCCTCTTCTaGCTGCTGTTTGGCTATGTGGTTGGCATAGTGGTT | + |
Preference number: 6 (lower is better) Translates to: GCLLLFLRKCLF*LLFGYVVGIVV Trigger: AACCACTATGCCAACCACATAGCCAAACAGCAGTCAGAAGAGGCATTTCCTCAGGAACAACAGAAGGCACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS CAA 72 bp | AACACGGCTTTAACTCCATGCTGCTCTGACGGAAACTaGTATGGGGCTGTTGCCCTTAAAGCTGAACTGAGG | + |
Preference number: 6 (lower is better) Translates to: NTALTPCCSDGN*YGAVALKAELR Trigger: CCTCAGTTCAGCTTTAAGGGCAACAGCCCCATACAAGTTTCCGTCAGAGCAGCATGGAGTTAAAGCCGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS CCA 72 bp | GTAGCTTTTCCACCTCTTGACAAATTCTTTGAAGATTaGGGACTCATCGATGGTGCTGAGCAGCTGCAGCTG | + |
Preference number: 6 (lower is better) Translates to: VAFPPLDKFFED*GLIDGAEQLQL Trigger: CAGCTGCAGCTGCTCAGCACCATCGATGAGTCCCCAATCTTCAAAGAATTTGTCAAGAGGTGGAAAAGCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS CAA 90 bp | GCAGCAAAGAATGCAGCCATGTGGGCTGTGGTTGAGATGGTAATGTaGTCCAGGAATCCCTTCCCTTTTGCAATCAACCTAACCACCTTT | + |
Preference number: 6 (lower is better) Translates to: AAKNAAMWAVVEMVM*SRNPFPFAINLTTF Trigger: AAAGGTGGTTAGGTTGATTGCAAAAGGGAAGGGATTCCTGGACAACATTACCATCTCAACCACAGCCCACATGGCTGCATTCTTTGCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS CAA 90 bp | AAAGACACACCTTCACTGGTTTCTGGAGCAATAAACTGTTTAACATaGGTGGATCTAGACTTGTCTGCCACACTGGCCATGAAGCACCCC | + |
Preference number: 6 (lower is better) Translates to: KDTPSLVSGAINCLT*VDLDLSATLAMKHP Trigger: GGGGTGCTTCATGGCCAGTGTGGCAGACAAGTCTAGATCCACCAATGTTAAACAGTTTATTGCTCCAGAAACCAGTGAAGGTGTGTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS TCA 72 bp | TTCTGGGCCCAATGCCGTAGTATATGTCCCTGTCTCTaGAAGCAATCAGCTGGGTGTTTGAGACATAATGCA | + |
Preference number: 6 (lower is better) Translates to: FWAQCRSICPCL*KQSAGCLRHNA Trigger: TGCATTATGTCTCAAACACCCAGCTGATTGCTTTCAGAGACAGGGACATATACTACGGCATTGGGCCCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS GCA 72 bp | CAGTCATGTTTATTCATGAACACGGCTTTAACTCCATaGTGCTCTGACGGAAACTTGTATGGGGCTGTTGCC | + |
Preference number: 6 (lower is better) Translates to: QSCLFMNTALTP*CSDGNLYGAVA Trigger: GGCAACAGCCCCATACAAGTTTCCGTCAGAGCAGCATGGAGTTAAAGCCGTGTTCATGAATAAACATGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS CAA 72 bp | AGACAGTCAATCTCTTCATATTTGAGCCCTAACACCTaGCTTCCCCCGTTGCTATTGAAGCCCCCAACAACA | + |
Preference number: 6 (lower is better) Translates to: RQSISSYLSPNT*LPPLLLKPPTT Trigger: TGTTGTTGGGGGCTTCAATAGCAACGGGGGAAGCAAGGTGTTAGGGCTCAAATATGAAGAGATTGACTGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS CAA 72 bp | AATGCAGCCATGTGGGCTGTGGTTGAGATGGTAATGTaGTCCAGGAATCCCTTCCCTTTTGCAATCAACCTA | + |
Preference number: 6 (lower is better) Translates to: NAAMWAVVEMVM*SRNPFPFAINL Trigger: TAGGTTGATTGCAAAAGGGAAGGGATTCCTGGACAACATTACCATCTCAACCACAGCCCACATGGCTGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS CAA 90 bp | TCCACTCTGAATCCACTACTCAAGTGCCGAGGAAACTGGATTGCTTaGTCGCTGGAACACTTATTCCACAAAAGTACTGTGACCAAAGTG | + |
Preference number: 6 (lower is better) Translates to: STLNPLLKCRGNWIA*SLEHLFHKSTVTKV Trigger: CACTTTGGTCACAGTACTTTTGTGGAATAAGTGTTCCAGCGACAAAGCAATCCAGTTTCCTCGGCACTTGAGTAGTGGATTCAGAGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS CAA 90 bp | TTAATGGTGTGCTCATCGTTTATGAGACAGTCAATCTCTTCATATTaGAGCCCTAACACCTTGCTTCCCCCGTTGCTATTGAAGCCCCCA | + |
Preference number: 6 (lower is better) Translates to: LMVCSSFMRQSISSY*SPNTLLPPLLLKPP Trigger: TGGGGGCTTCAATAGCAACGGGGGAAGCAAGGTGTTAGGGCTCAAATATGAAGAGATTGACTGTCTCATAAACGATGAGCACACCATTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS GCA 72 bp | TTTTCTAATCCATCCACTCTGAATCCACTACTCAAGTaGCGAGGAAACTGGATTGCTTTGTCGCTGGAACAC | + |
Preference number: 6 (lower is better) Translates to: FSNPSTLNPLLK*RGNWIALSLEH Trigger: GTGTTCCAGCGACAAAGCAATCCAGTTTCCTCGGCACTTGAGTAGTGGATTCAGAGTGGATGGATTAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS GCA 72 bp | TCATGTTTATTCATGAACACGGCTTTAACTCCATGCTaGTCTGACGGAAACTTGTATGGGGCTGTTGCCCTT | + |
Preference number: 6 (lower is better) Translates to: SCLFMNTALTPC*SDGNLYGAVAL Trigger: AAGGGCAACAGCCCCATACAAGTTTCCGTCAGAGCAGCATGGAGTTAAAGCCGTGTTCATGAATAAACATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS CCA 72 bp | TCCACTCTGAATCCACTACTCAAGTGCCGAGGAAACTaGATTGCTTTGTCGCTGGAACACTTATTCCACAAA | + |
Preference number: 6 (lower is better) Translates to: STLNPLLKCRGN*IALSLEHLFHK Trigger: TTTGTGGAATAAGTGTTCCAGCGACAAAGCAATCCAGTTTCCTCGGCACTTGAGTAGTGGATTCAGAGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS CAA 72 bp | CCTTCACTGGTTTCTGGAGCAATAAACTGTTTAACATaGGTGGATCTAGACTTGTCTGCCACACTGGCCATG | + |
Preference number: 6 (lower is better) Translates to: PSLVSGAINCLT*VDLDLSATLAM Trigger: CATGGCCAGTGTGGCAGACAAGTCTAGATCCACCAATGTTAAACAGTTTATTGCTCCAGAAACCAGTGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS TCA 72 bp | GAAACTTGTATGGGGCTGTTGCCCTTAAAGCTGAACTaGGGAATACATAGTCTTTCGTTAGAAGATAGGCCC | + |
Preference number: 6 (lower is better) Translates to: ETCMGLLPLKLN*GIHSLSLEDRP Trigger: GGGCCTATCTTCTAACGAAAGACTATGTATTCCTCAGTTCAGCTTTAAGGGCAACAGCCCCATACAAGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS GCA 72 bp | TCTGAATCCACTACTCAAGTGCCGAGGAAACTGGATTaGTTTGTCGCTGGAACACTTATTCCACAAAAGTAC | + |
Preference number: 6 (lower is better) Translates to: SESTTQVPRKLD*FVAGTLIPQKY Trigger: GTACTTTTGTGGAATAAGTGTTCCAGCGACAAAGCAATCCAGTTTCCTCGGCACTTGAGTAGTGGATTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS CAA 72 bp | TGCTCATCGTTTATGAGACAGTCAATCTCTTCATATTaGAGCCCTAACACCTTGCTTCCCCCGTTGCTATTG | + |
Preference number: 6 (lower is better) Translates to: CSSFMRQSISSY*SPNTLLPPLLL Trigger: CAATAGCAACGGGGGAAGCAAGGTGTTAGGGCTCAAATATGAAGAGATTGACTGTCTCATAAACGATGAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS GCA 72 bp | ATACTTCTATGTGAGGGGGTTTCTCGGTTAGATTCTTaGTGTAATGACTTAGCCCATACTGTGCAATCTGGA | + |
Preference number: 6 (lower is better) Translates to: ILLCEGVSRLDS*CNDLAHTVQSG Trigger: TCCAGATTGCACAGTATGGGCTAAGTCATTACAGCAAGAATCTAACCGAGAAACCCCCTCACATAGAAGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS GCA 72 bp | CCATTCATTAGGTCTGATGTTTCTGTCCCTGTCTTCTaGTGTTTCATATACTTCTATGTGAGGGGGTTTCTC | + |
Preference number: 6 (lower is better) Translates to: PFIRSDVSVPVF*CFIYFYVRGFL Trigger: GAGAAACCCCCTCACATAGAAGTATATGAAACAGCAGAAGACAGGGACAGAAACATCAGACCTAATGAATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS CAA 72 bp | TTTGCAATCAACCTAACCACCTTTTTGGGCATGATTTaGGTTGGCTTGACAGCTTTTGTGTTAGAAAGGCCC | + |
Preference number: 6 (lower is better) Translates to: FAINLTTFLGMI*VGLTAFVLERP Trigger: GGGCCTTTCTAACACAAAAGCTGTCAAGCCAACCAAAATCATGCCCAAAAAGGTGGTTAGGTTGATTGCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS TCA 72 bp | TTCAAAGGACATAAACACACCGTCAGGGTGATAAGGTaGTCTCTGTGCATAGACTTTGGAATAGCTATGAGA | + |
Preference number: 6 (lower is better) Translates to: FKGHKHTVRVIR*SLCIDFGIAMR Trigger: TCTCATAGCTATTCCAAAGTCTATGCACAGAGATCACCTTATCACCCTGACGGTGTGTTTATGTCCTTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS CCA 72 bp | CGTCAGGGTGATAAGGTGATCTCTGTGCATAGACTTTaGAATAGCTATGAGAGAATTCAAATCGATCATAGC | + |
Preference number: 6 (lower is better) Translates to: RQGDKVISVHRL*NSYERIQIDHS Trigger: GCTATGATCGATTTGAATTCTCTCATAGCTATTCCAAAGTCTATGCACAGAGATCACCTTATCACCCTGACG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |
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CDS GCA 72 bp | AAAACTTCATTCCCCTCTCGTCTCCCTTTAATGGTGTaGTCATCGTTTATGAGACAGTCAATCTCTTCATAT | + |
Preference number: 6 (lower is better) Translates to: KTSFPSRLPLMV*SSFMRQSISSY Trigger: ATATGAAGAGATTGACTGTCTCATAAACGATGAGCACACCATTAAAGGGAGACGAGAGGGGAATGAAGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034785.8 ENSMUST00000185675.7 |