Pregenerated sensors for GLCCI1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029638Ensembl transcript IDs: ENSMUST00000064285.15, ENSMUST00000161217.8, ENSMUST00000161494.2, ENSMUST00000162383.8, ENSMUST00000162567.8
Found 297 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCACTGGAGCCCGAGTTTTCCCGCATGAGCAGGCACACCTGCAGTaGTCTGCGCCGGCCGTCGTTCTGTCCCTGCCGTCTTGGCGCGTG | + |
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Preference number: 1 (lower is better) Translates to: CTGARVFPHEQAHLQ*SAPAVVLSLPSWRV Trigger: CACGCGCCAAGACGGCAGGGACAGAACGACGGCCGGCGCAGATCACTGCAGGTGTGCCTGCTCATGCGGGAAAACTCGGGCTCCAGTGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR GCA 90 bp | TCCCCTGCACTGGAGCCCGAGTTTTCCCGCATGAGCAGGCACACCTaGAGTGATCTGCGCCGGCCGTCGTTCTGTCCCTGCCGTCTTGGC | + |
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Preference number: 1 (lower is better) Translates to: SPALEPEFSRMSRHT*SDLRRPSFCPCRLG Trigger: GCCAAGACGGCAGGGACAGAACGACGGCCGGCGCAGATCACTGCAGGTGTGCCTGCTCATGCGGGAAAACTCGGGCTCCAGTGCAGGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR GCA 90 bp | ATGGAGGGCCGGCCACCTCTTTCCTATGGTCGCCGCCACCTCCCCTaGACTGGAGCCCGAGTTTTCCCGCATGAGCAGGCACACCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: MEGRPPLSYGRRHLP*TGARVFPHEQAHLQ Trigger: CTGCAGGTGTGCCTGCTCATGCGGGAAAACTCGGGCTCCAGTGCAGGGGAGGTGGCGGCGACCATAGGAAAGAGGTGGCCGGCCCTCCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR GCA 90 bp | GTGGACGGCCGGACGGCCTGCCTGCCACAGGGTGATGTCTCAGTTTaGGGTCCTGGCTTATGTGTTTCTAGCAGCCCTCCGGTCCTCACT | + |
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Preference number: 1 (lower is better) Translates to: VDGRTACLPQGDVSV*GPGLCVSSSPPVLT Trigger: AGTGAGGACCGGAGGGCTGCTAGAAACACATAAGCCAGGACCGCAAACTGAGACATCACCCTGTGGCAGGCAGGCCGTCCGGCCGTCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
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| 3UTR GCA 90 bp | GAGGGAAGAGAGAGCAAGCGCAACAGTGTGGACGGCCGGACGGCCTaGCTGCCACAGGGTGATGTCTCAGTTTGCGGTCCTGGCTTATGT | + |
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Preference number: 1 (lower is better) Translates to: EGRESKRNSVDGRTA*LPQGDVSVCGPGLC Trigger: ACATAAGCCAGGACCGCAAACTGAGACATCACCCTGTGGCAGGCAGGCCGTCCGGCCGTCCACACTGTTGCGCTTGCTCTCTCTTCCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
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| 3UTR GCA 90 bp | GAAGAGAGAGCAAGCGCAACAGTGTGGACGGCCGGACGGCCTGCCTaGCACAGGGTGATGTCTCAGTTTGCGGTCCTGGCTTATGTGTTT | + |
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Preference number: 1 (lower is better) Translates to: EERASATVWTAGRPA*HRVMSQFAVLAYVF Trigger: AAACACATAAGCCAGGACCGCAAACTGAGACATCACCCTGTGGCAGGCAGGCCGTCCGGCCGTCCACACTGTTGCGCTTGCTCTCTCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
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| 3UTR TCA 90 bp | AGGGCTCCAGGGAGTCGGCTGTGCTGGTGTCATCAGAGAGAGATGTaGAGGAAACCCGGGAGGAAAGCTGCTCTACGGTCAGTGTTGCCA | + |
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Preference number: 1 (lower is better) Translates to: RAPGSRLCWCHQREM*RKPGRKAALRSVLP Trigger: TGGCAACACTGACCGTAGAGCAGCTTTCCTCCCGGGTTTCCTTCACATCTCTCTCTGATGACACCAGCACAGCCGACTCCCTGGAGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
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| 3UTR CCA 90 bp | CGGGAGGAAAGCTGCTCTACGGTCAGTGTTGCCAGAGCCGAGCTCTaGCCAGAATTAGGGGAGTTCTTGAGCATCAGGTCAGAGGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: REESCSTVSVARAEL*PELGEFLSIRSEAG Trigger: ACCTGCCTCTGACCTGATGCTCAAGAACTCCCCTAATTCTGGCCAGAGCTCGGCTCTGGCAACACTGACCGTAGAGCAGCTTTCCTCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
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| 3UTR GCA 90 bp | TCCTTATCCTGGAGAATTTCAGAAACAGTCCCCAGGCCCGCCTGCTaGCATCACAGAGCCTGGACCAGCATCCCAACAAAACCTGCTGCC | + |
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Preference number: 1 (lower is better) Translates to: SLSWRISETVPRPAC*HHRAWTSIPTKPAA Trigger: GGCAGCAGGTTTTGTTGGGATGCTGGTCCAGGCTCTGTGATGGCAGCAGGCGGGCCTGGGGACTGTTTCTGAAATTCTCCAGGATAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR CCA 90 bp | AGTGATCTGCGCCGGCCGTCGTTCTGTCCCTGCCGTCTTGGCGCGTaGACGACCGTGGACATAAAGAAGAAAGCCCTGTTCTTTCTGTTA | + |
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Preference number: 1 (lower is better) Translates to: SDLRRPSFCPCRLGA*TTVDIKKKALFFLL Trigger: TAACAGAAAGAACAGGGCTTTCTTCTTTATGTCCACGGTCGTCCACGCGCCAAGACGGCAGGGACAGAACGACGGCCGGCGCAGATCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR GCA 90 bp | GCATCCTTATCCTGGAGAATTTCAGAAACAGTCCCCAGGCCCGCCTaGTGCCATCACAGAGCCTGGACCAGCATCCCAACAAAACCTGCT | + |
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Preference number: 1 (lower is better) Translates to: ASLSWRISETVPRPA*CHHRAWTSIPTKPA Trigger: AGCAGGTTTTGTTGGGATGCTGGTCCAGGCTCTGTGATGGCAGCAGGCGGGCCTGGGGACTGTTTCTGAAATTCTCCAGGATAAGGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR GCA 90 bp | AGATGTGAAGGAAACCCGGGAGGAAAGCTGCTCTACGGTCAGTGTTaGCAGAGCCGAGCTCTGGCCAGAATTAGGGGAGTTCTTGAGCAT | + |
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Preference number: 1 (lower is better) Translates to: RCEGNPGGKLLYGQC*QSRALARIRGVLEH Trigger: ATGCTCAAGAACTCCCCTAATTCTGGCCAGAGCTCGGCTCTGGCAACACTGACCGTAGAGCAGCTTTCCTCCCGGGTTTCCTTCACATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
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| 3UTR GCA 90 bp | GTTGTCACTACATGCTGCAACGAGAGGACATGTTGTGGGCAGACCTaGACTAACTTCTGTTCAAAGTCATCGTCGACCTGGGCACCTCCC | + |
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Preference number: 1 (lower is better) Translates to: VVTTCCNERTCCGQT*TNFCSKSSSTWAPP Trigger: GGGAGGTGCCCAGGTCGACGATGACTTTGAACAGAAGTTAGTGCAGGTCTGCCCACAACATGTCCTCTCGTTGCAGCATGTAGTGACAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR GCA 90 bp | CTCATTCCCAATCCATGGACCATGGGTGGAGACCAGCTCCCCCTCTaGTTTAGATCATCACATAGTTCTGAGTGGAGACGTGTTCCTCCA | + |
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Preference number: 1 (lower is better) Translates to: LIPNPWTMGGDQLPL*FRSSHSSEWRRVPP Trigger: TGGAGGAACACGTCTCCACTCAGAACTATGTGATGATCTAAAGCAGAGGGGGAGCTGGTCTCCACCCATGGTCCATGGATTGGGAATGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
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| 3UTR CCA 90 bp | GTCAAGTCCTCCAGTCAGCGTGGTCAGAAAGGTTCTACCTACAGCTaGCACAACAAGTTCGTGGAGGTGGCAGACATTGAAGAACAAGGG | + |
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Preference number: 1 (lower is better) Translates to: VKSSSQRGQKGSTYS*HNKFVEVADIEEQG Trigger: CCCTTGTTCTTCAATGTCTGCCACCTCCACGAACTTGTTGTGCCAGCTGTAGGTAGAACCTTTCTGACCACGCTGACTGGAGGACTTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR CCA 90 bp | AGATCAACACATCATGTAATGCTAACCCAGATATTAGAAGTTAAATaGAGGGCCGGCCACCTCTTTCCTATGGTCGCCGCCACCTCCCCT | + |
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Preference number: 1 (lower is better) Translates to: RSTHHVMLTQILEVK*RAGHLFPMVAATSP Trigger: AGGGGAGGTGGCGGCGACCATAGGAAAGAGGTGGCCGGCCCTCCATTTAACTTCTAATATCTGGGTTAGCATTACATGATGTGTTGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR GCA 90 bp | TCGGGCTCTCCAGGTGGCAACAGGAATCTCTATGGCTCTCTTCTATaGACTTTGTGGAGAACTTCTGTCAAGTCTGCAAGTTCAAGGCTA | + |
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Preference number: 1 (lower is better) Translates to: SGSPGGNRNLYGSLL*TLWRTSVKSASSRL Trigger: TAGCCTTGAACTTGCAGACTTGACAGAAGTTCTCCACAAAGTGCATAGAAGAGAGCCATAGAGATTCCTGTTGCCACCTGGAGAGCCCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR TCA 90 bp | TTCTACCTACAGCTGGCACAACAAGTTCGTGGAGGTGGCAGACATTaGAGAACAAGGGAAGCCTCAAAGCCTGTGCTTGCTATAATTTCC | + |
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Preference number: 1 (lower is better) Translates to: FYLQLAQQVRGGGRH*RTREASKPVLAIIS Trigger: GGAAATTATAGCAAGCACAGGCTTTGAGGCTTCCCTTGTTCTTCAATGTCTGCCACCTCCACGAACTTGTTGTGCCAGCTGTAGGTAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR GCA 90 bp | CTATGGCTCTCTTCTATGCACTTTGTGGAGAACTTCTGTCAAGTCTaGAAGTTCAAGGCTATTTACTCGGGGTTCTGCTCCACTCCATGC | + |
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Preference number: 1 (lower is better) Translates to: LWLSSMHFVENFCQV*KFKAIYSGFCSTPC Trigger: GCATGGAGTGGAGCAGAACCCCGAGTAAATAGCCTTGAACTTGCAGACTTGACAGAAGTTCTCCACAAAGTGCATAGAAGAGAGCCATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR CCA 90 bp | ATAAAGTCTGAAGTCGGGCTCTCCAGGTGGCAACAGGAATCTCTATaGCTCTCTTCTATGCACTTTGTGGAGAACTTCTGTCAAGTCTGC | + |
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Preference number: 1 (lower is better) Translates to: IKSEVGLSRWQQESL*LSSMHFVENFCQVC Trigger: GCAGACTTGACAGAAGTTCTCCACAAAGTGCATAGAAGAGAGCCATAGAGATTCCTGTTGCCACCTGGAGAGCCCGACTTCAGACTTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR CCA 90 bp | GCTCGGGGCACGGACTTAATAAACCTGTCTAAAGTGAGCAGAATTTaGAAGAAGATACTGGAAAACAATAAGGGAGCGGTCCAGCTCTAC | + |
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Preference number: 1 (lower is better) Translates to: ARGTDLINLSKVSRI*KKILENNKGAVQLY Trigger: GTAGAGCTGGACCGCTCCCTTATTGTTTTCCAGTATCTTCTTCCAAATTCTGCTCACTTTAGACAGGTTTATTAAGTCCGTGCCCCGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR GCA 90 bp | TACTGGAAAACAATAAGGGAGCGGTCCAGCTCTACAGCAAAACCATaGAGAGTCATTGAAAGCAGTAAGTTGTCACTACATGCTGCAACG | + |
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Preference number: 1 (lower is better) Translates to: YWKTIRERSSSTAKP*RVIESSKLSLHAAT Trigger: CGTTGCAGCATGTAGTGACAACTTACTGCTTTCAATGACTCTGCATGGTTTTGCTGTAGAGCTGGACCGCTCCCTTATTGTTTTCCAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR GCA 90 bp | AGGTGGCAGACATTGAAGAACAAGGGAAGCCTCAAAGCCTGTGCTTaGTATAATTTCCCTGCAAAATATGACCACTATTTAGAGCGAGCA | + |
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Preference number: 1 (lower is better) Translates to: RWQTLKNKGSLKACA*YNFPAKYDHYLERA Trigger: TGCTCGCTCTAAATAGTGGTCATATTTTGCAGGGAAATTATAGCAAGCACAGGCTTTGAGGCTTCCCTTGTTCTTCAATGTCTGCCACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR GCA 90 bp | AGTCAACTGAGTCCTCTTCTCCATGACAGTCTCTATAACACTGACTaGGTACCTTCAGAAGAGAGTATTACTGCAAACTTTGGTGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: SQLSPLLHDSLYNTD*VPSEESITANFGGK Trigger: CTTTCCACCAAAGTTTGCAGTAATACTCTCTTCTGAAGGTACGCAGTCAGTGTTATAGAGACTGTCATGGAGAAGAGGACTCAGTTGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR TCA 90 bp | ACGACCGTGGACATAAAGAAGAAAGCCCTGTTCTTTCTGTTACAATaGAGTGTTTTAATTGCAACCCTGATCTTTCTGAGCTTGAAGTGG | + |
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Preference number: 1 (lower is better) Translates to: TTVDIKKKALFFLLQ*SVLIATLIFLSLKW Trigger: CCACTTCAAGCTCAGAAAGATCAGGGTTGCAATTAAAACACTTCATTGTAACAGAAAGAACAGGGCTTTCTTCTTTATGTCCACGGTCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR GCA 90 bp | AACTTCTGTCAAGTCTGCAAGTTCAAGGCTATTTACTCGGGGTTCTaGTCCACTCCATGCGTTCTACGTCTTAACAAAATTATTCATGAT | + |
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Preference number: 1 (lower is better) Translates to: NFCQVCKFKAIYSGF*STPCVLRLNKIIHD Trigger: ATCATGAATAATTTTGTTAAGACGTAGAACGCATGGAGTGGAGCAGAACCCCGAGTAAATAGCCTTGAACTTGCAGACTTGACAGAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR GCA 90 bp | TTGATGGATCTGAGAGCACTTGCTTCAGTGTCAGTATCTGAGATTTaGTTTACCAAATTTGTGTCATGCTTCTATCAACTTGACTCTGTC | + |
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Preference number: 1 (lower is better) Translates to: LMDLRALASVSVSEI*FTKFVSCFYQLDSV Trigger: GACAGAGTCAAGTTGATAGAAGCATGACACAAATTTGGTAAAGCAAATCTCAGATACTGACACTGAAGCAAGTGCTCTCAGATCCATCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR TCA 90 bp | TTTCCAAACTTGTTTTTGGAACAAGTATCAGCTGGACAGAGGAGTTaGTTCTTCTGTAATCAACATCTCAGTAGAAAGTTTCCGATCCCA | + |
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Preference number: 1 (lower is better) Translates to: FPNLFLEQVSAGQRS*FFCNQHLSRKFPIP Trigger: TGGGATCGGAAACTTTCTACTGAGATGTTGATTACAGAAGAATCAACTCCTCTGTCCAGCTGATACTTGTTCCAAAAACAAGTTTGGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
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| 3UTR GCA 90 bp | TATAATTTCCCTGCAAAATATGACCACTATTTAGAGCGAGCAGTCTaGAAACGGGAAAGCTGTCAATTTGAATATTGTACAAAGTGTCTG | + |
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Preference number: 1 (lower is better) Translates to: YNFPAKYDHYLERAV*KRESCQFEYCTKCL Trigger: CAGACACTTTGTACAATATTCAAATTGACAGCTTTCCCGTTTGCAGACTGCTCGCTCTAAATAGTGGTCATATTTTGCAGGGAAATTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR TCA 90 bp | TATAAAGAAAAATCCTTATTTATTTCTGCAAAACGCCACTTGCTTTaGAATGAACTCCAGCCATCCCTGCATTTAAATTTCGTCACACGC | + |
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Preference number: 1 (lower is better) Translates to: YKEKSLFISAKRHLL*NELQPSLHLNFVTR Trigger: GCGTGTGACGAAATTTAAATGCAGGGATGGCTGGAGTTCATTTCAAAGCAAGTGGCGTTTTGCAGAAATAAATAAGGATTTTTCTTTATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR-3UTR CCA 90 bp | AGGGGATTCGTGCACCTGTTGGCTAACATTGTGATGAAGCTCGGGGCACGGACTCCAATCCATGGACCATaGGTGGAGACCAGCTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: RGFVHLLANIVMKLGARTPIHGP*VETSSP Trigger: GGGGGAGCTGGTCTCCACCCATGGTCCATGGATTGG...AGTCCGTGCCCCGAGCTTCATCACAATGTTAGCCAACAGGTGCACGAATCCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR-3UTR CCA 90 bp | AGGGGATTCGTGCACCTGTTGGCTAACATTGTGATGAAGCTCGGGGCACGGACTGCCACACACGTTAGGTaGAGATGGGAGAACTCTAGG | + |
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Preference number: 2 (lower is better) Translates to: RGFVHLLANIVMKLGARTATHVR*RWENSR Trigger: CCTAGAGTTCTCCCATCTCCACCTAACGTGTGTGGC...AGTCCGTGCCCCGAGCTTCATCACAATGTTAGCCAACAGGTGCACGAATCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR CAA 90 bp | GTCAGTGTTGCCAGAGCCGAGCTCTGGCCAGAATTAGGGGAGTTCTaGAGCATCAGGTCAGAGGCAGGTAAGAGAGGGCCTAGAAGTTTT | + |
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Preference number: 2 (lower is better) Translates to: VSVARAELWPELGEF*SIRSEAGKRGPRSF Trigger: AAAACTTCTAGGCCCTCTCTTACCTGCCTCTGACCTGATGCTCAAGAACTCCCCTAATTCTGGCCAGAGCTCGGCTCTGGCAACACTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGGCACAACAAGTTCGTGGAGGTGGCAGACATTGAAGAACAAGGGAAGCCTCCCACTTGCTTTGAAATaGACTCCAGCCATCCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: AGTTSSWRWQTLKNKGSLPLALK*TPAIPA Trigger: TGCAGGGATGGCTGGAGTTCATTTCAAAGCAAGTGG...GAGGCTTCCCTTGTTCTTCAATGTCTGCCACCTCCACGAACTTGTTGTGCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR-3UTR TCA 90 bp | GGTCTCTCAATCAGCCAAAAGAATAGAGTCCGTATTCCCACAACACCCACTTTCCTGCCTGCCACAGGGTaGTGTCTCAGTTTGCGGTCC | + |
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Preference number: 2 (lower is better) Translates to: GLSISQKNRVRIPTTPTFLPATG*CLSLRS Trigger: GGACCGCAAACTGAGACATCACCCTGTGGCAGGCAG...GAAAGTGGGTGTTGTGGGAATACGGACTCTATTCTTTTGGCTGATTGAGAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
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| 3UTR-3UTR TCA 90 bp | TACGGTCAGTGTTGCCAGAGCCGAGCTCTGGCCAGAATTAGGGGAGTTCTTGAGGTTTTTGTCAGGACATaGAAAGAGAGGGGCCGAGAT | + |
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Preference number: 2 (lower is better) Translates to: YGQCCQSRALARIRGVLEVFVRT*KERGRD Trigger: ATCTCGGCCCCTCTCTTTTCATGTCCTGACAAAAAC...CTCAAGAACTCCCCTAATTCTGGCCAGAGCTCGGCTCTGGCAACACTGACCGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
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| 3UTR-3UTR TCA 90 bp | TACGGTCAGTGTTGCCAGAGCCGAGCTCTGGCCAGAATTAGGGGAGTTCTTGAGTACAGGACAGAAAGCTaGTCCGGTTGGGATGAAATT | + |
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Preference number: 2 (lower is better) Translates to: YGQCCQSRALARIRGVLEYRTES*SGWDEI Trigger: AATTTCATCCCAACCGGATCAGCTTTCTGTCCTGTA...CTCAAGAACTCCCCTAATTCTGGCCAGAGCTCGGCTCTGGCAACACTGACCGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
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| 3UTR-3UTR GCA 90 bp | GATGTTCAGGTCAAGTCCTCCAGTCAGCGTGGTCAGAAAGGTTCTACCTACAGCCCATGTGCACGTGTATaGACACTCACGCACAGCATT | + |
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Preference number: 2 (lower is better) Translates to: DVQVKSSSQRGQKGSTYSPCARV*TLTHSI Trigger: AATGCTGTGCGTGAGTGTGCATACACGTGCACATGG...GCTGTAGGTAGAACCTTTCTGACCACGCTGACTGGAGGACTTGACCTGAACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR-3UTR CCA 90 bp | GCATTACTGCTTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCTCCATGGACCATGGGTaGAGACCAGCTCCCCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: ALLLSTKTAEYKSVPAKISMDHG*RPAPPL Trigger: CAGAGGGGGAGCTGGTCTCCACCCATGGTCCATGGA...GATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAAGCAGTAATGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGGCACAACAAGTTCGTGGAGGTGGCAGACATTGAAGAACAAGGGAAGCCTCATGCTGCACTGGTTCTaGGACATACACATTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: AGTTSSWRWQTLKNKGSLMLHWF*DIHILS Trigger: AGAGAGAATGTGTATGTCTCAGAACCAGTGCAGCAT...GAGGCTTCCCTTGTTCTTCAATGTCTGCCACCTCCACGAACTTGTTGTGCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR-3UTR CCA 90 bp | TCCAGCTCTACAGCAAAACCATGCAGAGTCATTGAAAGCAGTAAGTTGTCACTATCCATGGACCATGGGTaGAGACCAGCTCCCCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: SSSTAKPCRVIESSKLSLSMDHG*RPAPPL Trigger: CAGAGGGGGAGCTGGTCTCCACCCATGGTCCATGGA...TAGTGACAACTTACTGCTTTCAATGACTCTGCATGGTTTTGCTGTAGAGCTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR-3UTR TCA 90 bp | AGGGGATTCGTGCACCTGTTGGCTAACATTGTGATGAAGCTCGGGGCACGGACTAAGGAGACATCAAGGTaGCAAAATAGCACACAGAAT | + |
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Preference number: 2 (lower is better) Translates to: RGFVHLLANIVMKLGARTKETSR*QNSTQN Trigger: ATTCTGTGTGCTATTTTGTCACCTTGATGTCTCCTT...AGTCCGTGCCCCGAGCTTCATCACAATGTTAGCCAACAGGTGCACGAATCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR-3UTR TCA 90 bp | GGTAAGAGAGGGCCTAGAAGTTTTACAGGACAGAAAGCTGATCCGGTTGGGATGGCAAGAGAAGCAGTTTaGCATTTAGTACCCACAGGG | + |
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Preference number: 2 (lower is better) Translates to: GKRGPRSFTGQKADPVGMAREAV*HLVPTG Trigger: CCCTGTGGGTACTAAATGTCAAACTGCTTCTCTTGC...CATCCCAACCGGATCAGCTTTCTGTCCTGTAAAACTTCTAGGCCCTCTCTTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
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| 3UTR-3UTR CCA 90 bp | TCGGTCCCTGCCAAGATCAGTGTTAATAGCTATTTTGTGATGCTAAGTACTTTGTCCATGGACCATGGGTaGAGACCAGCTCCCCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: SVPAKISVNSYFVMLSTLSMDHG*RPAPPL Trigger: CAGAGGGGGAGCTGGTCTCCACCCATGGTCCATGGA...CAAAGTACTTAGCATCACAAAATAGCTATTAACACTGATCTTGGCAGGGACCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGGCACAACAAGTTCGTGGAGGTGGCAGACATTGAAGAACAAGGGAAGCCTCACACCACAAATTTGCTaGTTCTCCTCATGTTCCCTA | + |
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Preference number: 2 (lower is better) Translates to: AGTTSSWRWQTLKNKGSLTPQIC*FSSCSL Trigger: TAGGGAACATGAGGAGAACCAGCAAATTTGTGGTGT...GAGGCTTCCCTTGTTCTTCAATGTCTGCCACCTCCACGAACTTGTTGTGCCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR-3UTR TCA 90 bp | AGACTTCAACTGAAGTACCTGAAGCTAGGCCATAGGGTGGGCACTGTGCAACTGATGCAGATAGATGTCTaGGATCTCATTCCCAATCCA | + |
|
Preference number: 2 (lower is better) Translates to: RLQLKYLKLGHRVGTVQLMQIDV*DLIPNP Trigger: TGGATTGGGAATGAGATCTCAGACATCTATCTGCAT...CAGTTGCACAGTGCCCACCCTATGGCCTAGCTTCAGGTACTTCAGTTGAAGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064285.15 ENSMUST00000161494.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGGGATTCGTGCACCTGTTGGCTAACATTGTGATGAAGCTCGGGGCACGGACTGTCTCCATTAAATGCTaGATGACACACACATTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: RGFVHLLANIVMKLGARTVSIKC*MTHTFL Trigger: CAAAAATGTGTGTGTCATTCAGCATTTAATGGAGAC...AGTCCGTGCCCCGAGCTTCATCACAATGTTAGCCAACAGGTGCACGAATCCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR-3UTR TCA 90 bp | TACGGTCAGTGTTGCCAGAGCCGAGCTCTGGCCAGAATTAGGGGAGTTCTTGAGCTAACCTGCCCACATTaGAAATGTACAATAAAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: YGQCCQSRALARIRGVLELTCPH*KCTIKR Trigger: CCTTTTTATTGTACATTTTCAATGTGGGCAGGTTAG...CTCAAGAACTCCCCTAATTCTGGCCAGAGCTCGGCTCTGGCAACACTGACCGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| 3UTR-3UTR GCA 90 bp | ACACAGGACACAGTACTAATCTGTCAGACATACTATGAAATGCATAGTCTCCATCTCTACGGTCAGTGTTaGCAGAGCCGAGCTCTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: TQDTVLICQTYYEMHSLHLYGQC*QSRALA Trigger: GGCCAGAGCTCGGCTCTGGCAACACTGACCGTAGAG...ATGGAGACTATGCATTTCATAGTATGTCTGACAGATTAGTACTGTGTCCTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| 3UTR-3UTR CCA 90 bp | ACACAGGACACAGTACTAATCTGTCAGACATACTATGAAATGCATAGTCTCCATTCCATGGACCATGGGTaGAGACCAGCTCCCCCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: TQDTVLICQTYYEMHSLHSMDHG*RPAPPL Trigger: CAGAGGGGGAGCTGGTCTCCACCCATGGTCCATGGA...ATGGAGACTATGCATTTCATAGTATGTCTGACAGATTAGTACTGTGTCCTGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161494.2 ENSMUST00000162567.8 |
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| 3UTR-3UTR GCA 90 bp | CACACCACAAATTTGCTGGTTCTCCTCATGTTCCCTATACCCAGGATTAGCATCATAGGGTGGGCACTGTaGAACTGTTGTGGCCATTTT | + |
|
Preference number: 2 (lower is better) Translates to: HTTNLLVLLMFPIPRISIIGWAL*NCCGHF Trigger: AAAATGGCCACAACAGTTGCACAGTGCCCACCCTAT...GATGCTAATCCTGGGTATAGGGAACATGAGGAGAACCAGCAAATTTGTGGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064285.15 ENSMUST00000161494.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTCTCTCAATCAGCCAAAAGAATAGAGTCCGTATTCCCACAACACCCACTTTCATAGGGTGGGCACTGTaGAACTGTTGTGGCCATTTT | + |
|
Preference number: 2 (lower is better) Translates to: GLSISQKNRVRIPTTPTFIGWAL*NCCGHF Trigger: AAAATGGCCACAACAGTTGCACAGTGCCCACCCTAT...GAAAGTGGGTGTTGTGGGAATACGGACTCTATTCTTTTGGCTGATTGAGAGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
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| 3UTR CAA 90 bp | TCTACTGGTAACCACATGACAAAAGTGATGTCACACACCACAAATTaGCTGGTTCTCCTCATGTTCCCTATACCCAGGATTAGCATCTCC | + |
|
Preference number: 2 (lower is better) Translates to: STGNHMTKVMSHTTN*LVLLMFPIPRISIS Trigger: GGAGATGCTAATCCTGGGTATAGGGAACATGAGGAGAACCAGCAAATTTGTGGTGTGTGACATCACTTTTGTCATGTGGTTACCAGTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064285.15 ENSMUST00000161494.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTCTCTCAATCAGCCAAAAGAATAGAGTCCGTATTCCCACAACACCCACTTTCACTTTCCCTTTGATGTaGAGAATCACAGACCATCTG | + |
|
Preference number: 2 (lower is better) Translates to: GLSISQKNRVRIPTTPTFTFPLM*RITDHL Trigger: CAGATGGTCTGTGATTCTGCACATCAAAGGGAAAGT...GAAAGTGGGTGTTGTGGGAATACGGACTCTATTCTTTTGGCTGATTGAGAGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| 3UTR CAA 90 bp | AACTGGTACACTCTCTGTTCCTTTCTGGGATGCAAGAGAAGCAGTTaGACATTTAGTACCCACAGGGACAAAGGAATGAATGAGTTACAC | + |
|
Preference number: 2 (lower is better) Translates to: NWYTLCSFLGCKRSS*TFSTHRDKGMNELH Trigger: GTGTAACTCATTCATTCCTTTGTCCCTGTGGGTACTAAATGTCAAACTGCTTCTCTTGCATCCCAGAAAGGAACAGAGAGTGTACCAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| 3UTR-3UTR TCA 90 bp | TCGGTCCCTGCCAAGATCAGTGTTAATAGCTATTTTGTGATGCTAAGTACTTTGACTCTAGGCTCTAACTaGACTGAGAGCAACGGAACA | + |
|
Preference number: 2 (lower is better) Translates to: SVPAKISVNSYFVMLSTLTLGSN*TESNGT Trigger: TGTTCCGTTGCTCTCAGTTCAGTTAGAGCCTAGAGT...CAAAGTACTTAGCATCACAAAATAGCTATTAACACTGATCTTGGCAGGGACCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR-3UTR CCA 90 bp | CGTGTACAAAACACACTAGATAGTTCAAACGAAACAGAAGAGCTAGAGGCCAGTACAAGTTCGTGGAGGTaGCAGACATTGAAGAACAAG | + |
|
Preference number: 2 (lower is better) Translates to: RVQNTLDSSNETEELEASTSSWR*QTLKNK Trigger: CTTGTTCTTCAATGTCTGCCACCTCCACGAACTTGT...ACTGGCCTCTAGCTCTTCTGTTTCGTTTGAACTATCTAGTGTGTTTTGTACACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR CAA 90 bp | AACAGGATGTCTATCTTAGATACTAAGATAGAATTGATTGGAGTTTaGGCAAGGGAGGGCTGTGGTCTGTTTGATGGATCTGAGAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: NRMSILDTKIELIGV*AREGCGLFDGSEST Trigger: AGTGCTCTCAGATCCATCAAACAGACCACAGCCCTCCCTTGCCAAAACTCCAATCAATTCTATCTTAGTATCTAAGATAGACATCCTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR-3UTR GCA 90 bp | TGTTCTACTGGTAACCACATGACAAAAGTGATGTCACACACCACAAATTTGCTGCACACACCACAAATTTaGTGGTTCTCCTCATGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: CSTGNHMTKVMSHTTNLLHTPQI*WFSSCS Trigger: GGAACATGAGGAGAACCAGCAAATTTGTGGTGTGTG...CAGCAAATTTGTGGTGTGTGACATCACTTTTGTCATGTGGTTACCAGTAGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064285.15 ENSMUST00000161494.2 |
||
| 3UTR-3UTR GCA 90 bp | ATCACCAGCGGCAACTTTAGACTGCAAAGTATAATTGGCAAGAAAATGGGCCTGAACAAGAAATCTGCTTaGTTATGCTGCACTGGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: ITSGNFRLQSIIGKKMGLNKKSA*LCCTGS Trigger: AGAACCAGTGCAGCATAAGCAAGCAGATTTCTTGTT...CAGGCCCATTTTCTTGCCAATTATACTTTGCAGTCTAAAGTTGCCGCTGGTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR-3UTR GCA 90 bp | CACACCACAAATTTGCTGGTTCTCCTCATGTTCCCTATACCCAGGATTAGCATCAACTTCTGTCAAGTCTaGAAGTTCAAGGCTATTTAC | + |
|
Preference number: 2 (lower is better) Translates to: HTTNLLVLLMFPIPRISINFCQV*KFKAIY Trigger: GTAAATAGCCTTGAACTTGCAGACTTGACAGAAGTT...GATGCTAATCCTGGGTATAGGGAACATGAGGAGAACCAGCAAATTTGTGGTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR-3UTR GCA 90 bp | ACACAGGACACAGTACTAATCTGTCAGACATACTATGAAATGCATAGTCTCCATGGTGATGTCTCAGTTTaGGGTCCTGGCTTATGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: TQDTVLICQTYYEMHSLHGDVSV*GPGLCV Trigger: AACACATAAGCCAGGACCGCAAACTGAGACATCACC...ATGGAGACTATGCATTTCATAGTATGTCTGACAGATTAGTACTGTGTCCTGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| 3UTR-3UTR CCA 90 bp | CGTGTACAAAACACACTAGATAGTTCAAACGAAACAGAAGAGCTAGAGGCCAGTACGGCATCCTTATCCTaGAGAATTTCAGAAACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: RVQNTLDSSNETEELEASTASLS*RISETV Trigger: GACTGTTTCTGAAATTCTCCAGGATAAGGATGCCGT...ACTGGCCTCTAGCTCTTCTGTTTCGTTTGAACTATCTAGTGTGTTTTGTACACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR-3UTR CCA 90 bp | TTACTGCTTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCAGTGGAACAAGTATCAGCTaGACAGAGGAGTTGATTCTT | + |
|
Preference number: 2 (lower is better) Translates to: LLLSTKTAEYKSVPAKISGTSIS*TEELIL Trigger: AAGAATCAACTCCTCTGTCCAGCTGATACTTGTTCC...ACTGATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAAGCAGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| 3UTR CAA 90 bp | ACACGCAATGGGGAATGTTTATGTAGGCTACTACTGAGGCTTTATTaGCAACACTGTAACAGTCAGTCACTGAGCAACACAACTTGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: TRNGECLCRLLLRLY*QHCNSQSLSNTTCF Trigger: AAAACAAGTTGTGTTGCTCAGTGACTGACTGTTACAGTGTTGCAAATAAAGCCTCAGTAGTAGCCTACATAAACATTCCCCATTGCGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR CAA 90 bp | TACTTTCCCTTTGATGTGCAGAATCACAGACCATCTGTAAGCTACTaGCATGTGGTCACTAGTCTTGTTCCTAAATGTATTTGTCGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: YFPFDVQNHRPSVSY*HVVTSLVPKCICRS Trigger: TGACCGACAAATACATTTAGGAACAAGACTAGTGACCACATGCAAGTAGCTTACAGATGGTCTGTGATTCTGCACATCAAAGGGAAAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
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| 3UTR-3UTR TCA 90 bp | GTCCCTGCCAAGATCAGTGTTAATAGCTATTTTGTGATGCTAAGTACTTTGCTGATGCAGATAGATGTCTaGGATCTCATTCCCAATCCA | + |
|
Preference number: 2 (lower is better) Translates to: VPAKISVNSYFVMLSTLLMQIDV*DLIPNP Trigger: TGGATTGGGAATGAGATCTCAGACATCTATCTGCAT...CAGCAAAGTACTTAGCATCACAAAATAGCTATTAACACTGATCTTGGCAGGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
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| 3UTR-3UTR TCA 90 bp | TCGGTCCCTGCCAAGATCAGTGTTAATAGCTATTTTGTGATGCTAAGTACTTTGATGCAGATAGATGTCTaGGATCTCATTCCCAATCCA | + |
|
Preference number: 2 (lower is better) Translates to: SVPAKISVNSYFVMLSTLMQIDV*DLIPNP Trigger: TGGATTGGGAATGAGATCTCAGACATCTATCTGCAT...CAAAGTACTTAGCATCACAAAATAGCTATTAACACTGATCTTGGCAGGGACCGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
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| 3UTR-3UTR TCA 90 bp | CGTGTACAAAACACACTAGATAGTTCAAACGAAACAGAAGAGCTAGAGGCCAGTGTAACAGTCAGTCACTaGGCAACACAACTTGTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: RVQNTLDSSNETEELEASVTVSH*ATQLVF Trigger: AAAAACAAGTTGTGTTGCTCAGTGACTGACTGTTAC...ACTGGCCTCTAGCTCTTCTGTTTCGTTTGAACTATCTAGTGTGTTTTGTACACG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR-3UTR CCA 90 bp | CGTGTACAAAACACACTAGATAGTTCAAACGAAACAGAAGAGCTAGAGGCCAGTACTGCAAAGTATAATTaGCAAGAAAATGGGCCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: RVQNTLDSSNETEELEASTAKYN*QENGPG Trigger: TCCAGGCCCATTTTCTTGCCAATTATACTTTGCAGT...ACTGGCCTCTAGCTCTTCTGTTTCGTTTGAACTATCTAGTGTGTTTTGTACACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR CAA 90 bp | ATAACACTGACTGCGTACCTTCAGAAGAGAGTATTACTGCAAACTTaGGTGGAAAGGAGACATCAAGGTGACAAAATAGCACACAGAATA | + |
|
Preference number: 2 (lower is better) Translates to: ITLTAYLQKRVLLQT*VERRHQGDKIAHRI Trigger: TATTCTGTGTGCTATTTTGTCACCTTGATGTCTCCTTTCCACCAAAGTTTGCAGTAATACTCTCTTCTGAAGGTACGCAGTCAGTGTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR-3UTR GCA 90 bp | TCCAGCTCTACAGCAAAACCATGCAGAGTCATTGAAAGCAGTAAGTTGTCACTAAGAAGAGAGTATTACTaGAAACTTTGGTGGAAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: SSSTAKPCRVIESSKLSLRREYY*KLWWKG Trigger: TCCTTTCCACCAAAGTTTGCAGTAATACTCTCTTCT...TAGTGACAACTTACTGCTTTCAATGACTCTGCATGGTTTTGCTGTAGAGCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR-3UTR TCA 90 bp | TGTATGCACACTCACGCACAGCATTTTGTAAAAATTAACACGGTATCATCACTTGGAAAGGCAAAAGAGTaGTGTTCCCTCTTTAGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: CMHTHAQHFVKINTVSSLGKAKE*CSLFSF Trigger: AAAGCTAAAGAGGGAACATCACTCTTTTGCCTTTCC...AAGTGATGATACCGTGTTAATTTTTACAAAATGCTGTGCGTGAGTGTGCATACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR-3UTR TCA 90 bp | TGTTCTACTGGTAACCACATGACAAAAGTGATGTCACACACCACAAATTTGCTGTATCTGAGGCTTAAATaGGACAGCTTTAAGCTATTG | + |
|
Preference number: 2 (lower is better) Translates to: CSTGNHMTKVMSHTTNLLYLRLK*DSFKLL Trigger: CAATAGCTTAAAGCTGTCTCATTTAAGCCTCAGATA...CAGCAAATTTGTGGTGTGTGACATCACTTTTGTCATGTGGTTACCAGTAGAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR-3UTR GCA 90 bp | CATCTCCTAGGGATCAATGCACTTCTTATTCTAGTGTGGAATGGAATGAAGAAATCTCCTAGGGATCAATaGACTTCTTATTCTAGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: HLLGINALLILVWNGMKKSPRDQ*TSYSSV Trigger: CACACTAGAATAAGAAGTGCATTGATCCCTAGGAGA...TTTCTTCATTCCATTCCACACTAGAATAAGAAGTGCATTGATCCCTAGGAGATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064285.15 ENSMUST00000161494.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGACAGCAAACATGAATTCATGAATACACATGTTAGATATGCCTACAGAGAAGCTGGACAGAGGAGTTaGTTCTTCTGTAATCAACAT | + |
|
Preference number: 2 (lower is better) Translates to: KDSKHEFMNTHVRYAYREAGQRS*FFCNQH Trigger: ATGTTGATTACAGAAGAATCAACTCCTCTGTCCAGC...TTCTCTGTAGGCATATCTAACATGTGTATTCATGAATTCATGTTTGCTGTCCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
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| 3UTR-3UTR CCA 90 bp | CATCTCCTAGGGATCAATGCACTTCTTATTCTAGTGTGGAATGGAATGAAGAAATATTACTGCAAACTTTaGTGGAAAGGAGACATCAAG | + |
|
Preference number: 2 (lower is better) Translates to: HLLGINALLILVWNGMKKYYCKL*WKGDIK Trigger: CTTGATGTCTCCTTTCCACCAAAGTTTGCAGTAATA...TTTCTTCATTCCATTCCACACTAGAATAAGAAGTGCATTGATCCCTAGGAGATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| 3UTR-3UTR GCA 90 bp | GCTGTCAATTTGAATATTGTACAAAGTGTCTGTGTGCTTACCATAACAACAAAGTATGGCTCTCTTCTATaGACTTTGTGGAGAACTTCT | + |
|
Preference number: 2 (lower is better) Translates to: AVNLNIVQSVCVLTITTKYGSLL*TLWRTS Trigger: AGAAGTTCTCCACAAAGTGCATAGAAGAGAGCCATA...CTTTGTTGTTATGGTAAGCACACAGACACTTTGTACAATATTCAAATTGACAGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR-3UTR CCA 90 bp | CATCTCCTAGGGATCAATGCACTTCTTATTCTAGTGTGGAATGGAATGAAGAAACTTCTTATTCTAGTGTaGAATGGAATGAAGAAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: HLLGINALLILVWNGMKKLLILV*NGMKKR Trigger: CCTTTTCTTCATTCCATTCCACACTAGAATAAGAAG...TTTCTTCATTCCATTCCACACTAGAATAAGAAGTGCATTGATCCCTAGGAGATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064285.15 ENSMUST00000161494.2 |
||
| 3UTR TCA 72 bp | CCACCTCCCCTGCACTGGAGCCCGAGTTTTCCCGCATaGGCAGGCACACCTGCAGTGATCTGCGCCGGCCGT | + |
|
Preference number: 3 (lower is better) Translates to: PPPLHWSPSFPA*AGTPAVICAGR Trigger: ACGGCCGGCGCAGATCACTGCAGGTGTGCCTGCTCATGCGGGAAAACTCGGGCTCCAGTGCAGGGGAGGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR GCA 72 bp | CGGCCACCTCTTTCCTATGGTCGCCGCCACCTCCCCTaGACTGGAGCCCGAGTTTTCCCGCATGAGCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: RPPLSYGRRHLP*TGARVFPHEQA Trigger: TGCCTGCTCATGCGGGAAAACTCGGGCTCCAGTGCAGGGGAGGTGGCGGCGACCATAGGAAAGAGGTGGCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR CCA 72 bp | ACAGTCCCCAGGCCCGCCTGCTGCCATCACAGAGCCTaGACCAGCATCCCAACAAAACCTGCTGCCTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: TVPRPACCHHRA*TSIPTKPAACP Trigger: AGGACAGGCAGCAGGTTTTGTTGGGATGCTGGTCCAGGCTCTGTGATGGCAGCAGGCGGGCCTGGGGACTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR TCA 72 bp | CAAGAAAATGGGCCTGGAACACCTAGATCTCCTGGCTaGGCTCTCCCGGAGGGGATTCGTGCACCTGTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: QENGPGTPRSPG*ALPEGIRAPVG Trigger: GCCAACAGGTGCACGAATCCCCTCCGGGAGAGCTCAGCCAGGAGATCTAGGTGTTCCAGGCCCATTTTCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR GCA 72 bp | TCCTGGAGAATTTCAGAAACAGTCCCCAGGCCCGCCTaGTGCCATCACAGAGCCTGGACCAGCATCCCAACA | + |
|
Preference number: 3 (lower is better) Translates to: SWRISETVPRPA*CHHRAWTSIPT Trigger: TGTTGGGATGCTGGTCCAGGCTCTGTGATGGCAGCAGGCGGGCCTGGGGACTGTTTCTGAAATTCTCCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR GCA 72 bp | GGAAACCCGGGAGGAAAGCTGCTCTACGGTCAGTGTTaGCAGAGCCGAGCTCTGGCCAGAATTAGGGGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: GNPGGKLLYGQC*QSRALARIRGV Trigger: AACTCCCCTAATTCTGGCCAGAGCTCGGCTCTGGCAACACTGACCGTAGAGCAGCTTTCCTCCCGGGTTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| 3UTR GCA 72 bp | TCAGAGAGAGATGTGAAGGAAACCCGGGAGGAAAGCTaGTCTACGGTCAGTGTTGCCAGAGCCGAGCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SERDVKETREES*STVSVARAELW Trigger: CCAGAGCTCGGCTCTGGCAACACTGACCGTAGAGCAGCTTTCCTCCCGGGTTTCCTTCACATCTCTCTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| 3UTR CCA 72 bp | AGCTGCTCTACGGTCAGTGTTGCCAGAGCCGAGCTCTaGCCAGAATTAGGGGAGTTCTTGAGCATCAGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: SCSTVSVARAEL*PELGEFLSIRS Trigger: TGACCTGATGCTCAAGAACTCCCCTAATTCTGGCCAGAGCTCGGCTCTGGCAACACTGACCGTAGAGCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGGGATTCGTGCACCTGTTGGCTAACATTGTGATGAAGCTCGGGGCACGGACTTGGAGGTGGCAGACATaGAAGAACAAGGGAAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RGFVHLLANIVMKLGARTWRWQT*KNKGSL Trigger: GAGGCTTCCCTTGTTCTTCAATGTCTGCCACCTCCA...AGTCCGTGCCCCGAGCTTCATCACAATGTTAGCCAACAGGTGCACGAATCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR-3UTR CAA 90 bp | AGGGGATTCGTGCACCTGTTGGCTAACATTGTGATGAAGCTCGGGGCACGGACTGAATTGATTGGAGTTTaGGCAAGGGAGGGCTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: RGFVHLLANIVMKLGARTELIGV*AREGCG Trigger: ACCACAGCCCTCCCTTGCCAAAACTCCAATCAATTC...AGTCCGTGCCCCGAGCTTCATCACAATGTTAGCCAACAGGTGCACGAATCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR GCA 72 bp | CCATCACAGAGCCTGGACCAGCATCCCAACAAAACCTaGTGCCTGTCCTGCATTGTCAAAGAGTGGTTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: PSQSLDQHPNKT*CLSCIVKEWFA Trigger: AGCAAACCACTCTTTGACAATGCAGGACAGGCAGCAGGTTTTGTTGGGATGCTGGTCCAGGCTCTGTGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGATCTCATTCCCAATCCATGGACCATGGGTGGAGACCAGCTCCCCCTCTGTTGCTGTTGGTGATGTaGGGAAAGTTTGTCACTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LRSHSQSMDHGWRPAPPLLLLVM*GKFVTP Trigger: TGGAGTGACAAACTTTCCCAACATCACCAACAGCAA...CAGAGGGGGAGCTGGTCTCCACCCATGGTCCATGGATTGGGAATGAGATCTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| 3UTR TCA 72 bp | AACCCTGATCTTTCTGAGCTTGAAGTGGTTGAAGCCTaGGGACAGTGGGAGAGAAGGTTCCTACAGTCCCGT | + |
|
Preference number: 3 (lower is better) Translates to: NPDLSELEVVEA*GQWERRFLQSR Trigger: ACGGGACTGTAGGAACCTTCTCTCCCACTGTCCTCAGGCTTCAACCACTTCAAGCTCAGAAAGATCAGGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR GCA 72 bp | ACATGCTGCAACGAGAGGACATGTTGTGGGCAGACCTaGACTAACTTCTGTTCAAAGTCATCGTCGACCTGG | + |
|
Preference number: 3 (lower is better) Translates to: TCCNERTCCGQT*TNFCSKSSSTW Trigger: CCAGGTCGACGATGACTTTGAACAGAAGTTAGTGCAGGTCTGCCCACAACATGTCCTCTCGTTGCAGCATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR GCA 72 bp | TCACAGAGCCTGGACCAGCATCCCAACAAAACCTGCTaGCTGTCCTGCATTGTCAAAGAGTGGTTTGCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: SQSLDQHPNKTC*LSCIVKEWFAQ Trigger: TTGAGCAAACCACTCTTTGACAATGCAGGACAGGCAGCAGGTTTTGTTGGGATGCTGGTCCAGGCTCTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR GCA 72 bp | AATCCATGGACCATGGGTGGAGACCAGCTCCCCCTCTaGTTTAGATCATCACATAGTTCTGAGTGGAGACGT | + |
|
Preference number: 3 (lower is better) Translates to: NPWTMGGDQLPL*FRSSHSSEWRR Trigger: ACGTCTCCACTCAGAACTATGTGATGATCTAAAGCAGAGGGGGAGCTGGTCTCCACCCATGGTCCATGGATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| 3UTR CCA 72 bp | TCCAGTCAGCGTGGTCAGAAAGGTTCTACCTACAGCTaGCACAACAAGTTCGTGGAGGTGGCAGACATTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SSQRGQKGSTYS*HNKFVEVADIE Trigger: TTCAATGTCTGCCACCTCCACGAACTTGTTGTGCCAGCTGTAGGTAGAACCTTTCTGACCACGCTGACTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR CCA 72 bp | CTCCCCCTCTGCTTTAGATCATCACATAGTTCTGAGTaGAGACGTGTTCCTCCACCTGCAAGTCCTGTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LPLCFRSSHSSE*RRVPPPASPVG Trigger: TCCTACAGGACTTGCAGGTGGAGGAACACGTCTCCACTCAGAACTATGTGATGATCTAAAGCAGAGGGGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| 3UTR CCA 72 bp | AGAAAGGTTCTACCTACAGCTGGCACAACAAGTTCGTaGAGGTGGCAGACATTGAAGAACAAGGGAAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RKVLPTAGTTSS*RWQTLKNKGSL Trigger: GAGGCTTCCCTTGTTCTTCAATGTCTGCCACCTCCACGAACTTGTTGTGCCAGCTGTAGGTAGAACCTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR CCA 72 bp | CATCATGTAATGCTAACCCAGATATTAGAAGTTAAATaGAGGGCCGGCCACCTCTTTCCTATGGTCGCCGCC | + |
|
Preference number: 3 (lower is better) Translates to: HHVMLTQILEVK*RAGHLFPMVAA Trigger: GGCGGCGACCATAGGAAAGAGGTGGCCGGCCCTCCATTTAACTTCTAATATCTGGGTTAGCATTACATGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR-3UTR CAA 90 bp | AGACTTCAACTGAAGTACCTGAAGCTAGGCCATAGGGTGGGCACTGTGCAACTGGTGATGCTAAGTACTTaGCTGTTGGTGATGTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: RLQLKYLKLGHRVGTVQLVMLST*LLVMLG Trigger: TCCCAACATCACCAACAGCAAAGTACTTAGCATCAC...CAGTTGCACAGTGCCCACCCTATGGCCTAGCTTCAGGTACTTCAGTTGAAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064285.15 ENSMUST00000161494.2 |
||
| 3UTR-3UTR CAA 90 bp | CACACCACAAATTTGCTGGTTCTCCTCATGTTCCCTATACCCAGGATTAGCATCGAATTAGGGGAGTTCTaGAGCATCAGGTCAGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: HTTNLLVLLMFPIPRISIELGEF*SIRSEA Trigger: TGCCTCTGACCTGATGCTCAAGAACTCCCCTAATTC...GATGCTAATCCTGGGTATAGGGAACATGAGGAGAACCAGCAAATTTGTGGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| 3UTR TCA 72 bp | ATGGCAAGCGAAACCCTAAAGTGGATCGAGAAATGCTaGAGGAAGTTATCACCAGCGGCAACTTTAGACTGC | + |
|
Preference number: 3 (lower is better) Translates to: MASETLKWIEKC*RKLSPAATLDC Trigger: GCAGTCTAAAGTTGCCGCTGGTGATAACTTCCTTCAGCATTTCTCGATCCACTTTAGGGTTTCGCTTGCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR TCA 72 bp | ACAGTGGGAGAGAAGGTTCCTACAGTCCCGTGTGTTTaGAACCTTCCTGTAAGGACTGTGTTAGAAACCATG | + |
|
Preference number: 3 (lower is better) Translates to: TVGEKVPTVPCV*NLPVRTVLETM Trigger: CATGGTTTCTAACACAGTCCTTACAGGAAGGTTTCAAACACACGGGACTGTAGGAACCTTCTCTCCCACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR GCA 72 bp | CCAGGTGGCAACAGGAATCTCTATGGCTCTCTTCTATaGACTTTGTGGAGAACTTCTGTCAAGTCTGCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: PGGNRNLYGSLL*TLWRTSVKSAS Trigger: ACTTGCAGACTTGACAGAAGTTCTCCACAAAGTGCATAGAAGAGAGCCATAGAGATTCCTGTTGCCACCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR CCA 72 bp | GTTTTAATTGCAACCCTGATCTTTCTGAGCTTGAAGTaGTTGAAGCCTGAGGACAGTGGGAGAGAAGGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: VLIATLIFLSLK*LKPEDSGREGS Trigger: GGAACCTTCTCTCCCACTGTCCTCAGGCTTCAACCACTTCAAGCTCAGAAAGATCAGGGTTGCAATTAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR GCA 72 bp | TCTTCTATGCACTTTGTGGAGAACTTCTGTCAAGTCTaGAAGTTCAAGGCTATTTACTCGGGGTTCTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SSMHFVENFCQV*KFKAIYSGFCS Trigger: GGAGCAGAACCCCGAGTAAATAGCCTTGAACTTGCAGACTTGACAGAAGTTCTCCACAAAGTGCATAGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR-3UTR CAA 90 bp | TTACCTGAGTTTAGACTTCAACTGAAGTACCTGAAGCTAGGCCATAGGGTGGGCATGACACACACATTTTaGCAAGCATTACTGCTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LPEFRLQLKYLKLGHRVGMTHTF*QALLLS Trigger: GGAAAGCAGTAATGCTTGCAAAAATGTGTGTGTCAT...GCCCACCCTATGGCCTAGCTTCAGGTACTTCAGTTGAAGTCTAAACTCAGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064285.15 ENSMUST00000161494.2 |
||
| 3UTR TCA 72 bp | GGTATCATCACTTTATCAGCTCATCCTTCTACTCGTTaGCTCCTTAGAGGAGTCAAAGGAAACCGCAGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: GIITLSAHPSTR*LLRGVKGNRRY Trigger: ATACCTGCGGTTTCCTTTGACTCCTCTAAGGAGTCAACGAGTAGAAGGATGAGCTGATAAAGTGATGATACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR GCA 72 bp | CAAGTCTGCAAGTTCAAGGCTATTTACTCGGGGTTCTaGTCCACTCCATGCGTTCTACGTCTTAACAAAATT | + |
|
Preference number: 3 (lower is better) Translates to: QVCKFKAIYSGF*STPCVLRLNKI Trigger: AATTTTGTTAAGACGTAGAACGCATGGAGTGGAGCAGAACCCCGAGTAAATAGCCTTGAACTTGCAGACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR GCA 72 bp | ACAATAAGGGAGCGGTCCAGCTCTACAGCAAAACCATaGAGAGTCATTGAAAGCAGTAAGTTGTCACTACAT | + |
|
Preference number: 3 (lower is better) Translates to: TIRERSSSTAKP*RVIESSKLSLH Trigger: ATGTAGTGACAACTTACTGCTTTCAATGACTCTGCATGGTTTTGCTGTAGAGCTGGACCGCTCCCTTATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR GCA 72 bp | ACAACTAACTGGTACACTCTCTGTTCCTTTCTGGGATaGAAGAGAAGCAGTTTGACATTTAGTACCCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: TTNWYTLCSFLG*KRSSLTFSTHR Trigger: CCTGTGGGTACTAAATGTCAAACTGCTTCTCTTGCATCCCAGAAAGGAACAGAGAGTGTACCAGTTAGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGCTCTACAGCAAAACCATGCAGAGTCATTGAAAGCAGTAAGTTGTCACTATTGCTGTTGGTGATGTaGGGAAAGTTTGTCACTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SSSTAKPCRVIESSKLSLLLLVM*GKFVTP Trigger: TGGAGTGACAAACTTTCCCAACATCACCAACAGCAA...TAGTGACAACTTACTGCTTTCAATGACTCTGCATGGTTTTGCTGTAGAGCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR-3UTR CAA 90 bp | CCCACTTTCCAAACTAAACCAACAACTAACTGGTACACTCTCTGTTCCTTTCTGTGCAAGAGAAGCAGTTaGACATTTAGTACCCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: PTFQTKPTTNWYTLCSFLCKRSS*TFSTHR Trigger: CCTGTGGGTACTAAATGTCAAACTGCTTCTCTTGCA...CAGAAAGGAACAGAGAGTGTACCAGTTAGTTGTTGGTTTAGTTTGGAAAGTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| 3UTR CCA 72 bp | ACAACACCCACTTTCCAAACTAAACCAACAACTAACTaGTACACTCTCTGTTCCTTTCTGGGATGCAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: TTPTFQTKPTTN*YTLCSFLGCKR Trigger: TCTCTTGCATCCCAGAAAGGAACAGAGAGTGTACCAGTTAGTTGTTGGTTTAGTTTGGAAAGTGGGTGTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTCTCTCAATCAGCCAAAAGAATAGAGTCCGTATTCCCACAACACCCACTTTCATGTGGTCACTAGTCTaGTTCCTAAATGTATTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: GLSISQKNRVRIPTTPTFMWSLV*FLNVFV Trigger: GACAAATACATTTAGGAACAAGACTAGTGACCACAT...GAAAGTGGGTGTTGTGGGAATACGGACTCTATTCTTTTGGCTGATTGAGAGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCACTTTCCAAACTAAACCAACAACTAACTGGTACACTCTCTGTTCCTTTCTGCAAACTACTTTCCCTTaGATGTGCAGAATCACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: PTFQTKPTTNWYTLCSFLQTTFP*MCRITD Trigger: GTCTGTGATTCTGCACATCAAAGGGAAAGTAGTTTG...CAGAAAGGAACAGAGAGTGTACCAGTTAGTTGTTGGTTTAGTTTGGAAAGTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCTACTGGTAACCACATGACAAAAGTGATGTCACACACCACAAATTTGCTGGACAGCTTTAAGCTATaGCTCTCGAAAGTCAACAAG | + |
|
Preference number: 3 (lower is better) Translates to: CSTGNHMTKVMSHTTNLLDSFKL*LSKVNK Trigger: CTTGTTGACTTTCGAGAGCAATAGCTTAAAGCTGTC...CAGCAAATTTGTGGTGTGTGACATCACTTTTGTCATGTGGTTACCAGTAGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGCTCTACAGCAAAACCATGCAGAGTCATTGAAAGCAGTAAGTTGTCACTAGTATTACTGCAAACTTaGGTGGAAAGGAGACATCAA | + |
|
Preference number: 3 (lower is better) Translates to: SSSTAKPCRVIESSKLSLVLLQT*VERRHQ Trigger: TTGATGTCTCCTTTCCACCAAAGTTTGCAGTAATAC...TAGTGACAACTTACTGCTTTCAATGACTCTGCATGGTTTTGCTGTAGAGCTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR-3UTR CAA 90 bp | CATCTCCTAGGGATCAATGCACTTCTTATTCTAGTGTGGAATGGAATGAAGAAATCTCTTCTATGCACTTaGTGGAGAACTTCTGTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: HLLGINALLILVWNGMKKSLLCT*WRTSVK Trigger: CTTGACAGAAGTTCTCCACAAAGTGCATAGAAGAGA...TTTCTTCATTCCATTCCACACTAGAATAAGAAGTGCATTGATCCCTAGGAGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR TCA 72 bp | GATGGATCTGAGAGCACTTGCTTCAGTGTCAGTATCTaGGATTTGCTTTACCAAATTTGTGTCATGCTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: DGSESTCFSVSI*DLLYQICVMLL Trigger: TAGAAGCATGACACAAATTTGGTAAAGCAAATCTCAGATACTGACACTGAAGCAAGTGCTCTCAGATCCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR GCA 72 bp | CCTGCAAAATATGACCACTATTTAGAGCGAGCAGTCTaGAAACGGGAAAGCTGTCAATTTGAATATTGTACA | + |
|
Preference number: 3 (lower is better) Translates to: PAKYDHYLERAV*KRESCQFEYCT Trigger: TGTACAATATTCAAATTGACAGCTTTCCCGTTTGCAGACTGCTCGCTCTAAATAGTGGTCATATTTTGCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR-3UTR CAA 90 bp | TCGGTCCCTGCCAAGATCAGTGTTAATAGCTATTTTGTGATGCTAAGTACTTTGTTCATACTGAAAATGTaGGAACAAAACACAGGACAC | + |
|
Preference number: 3 (lower is better) Translates to: SVPAKISVNSYFVMLSTLFILKM*EQNTGH Trigger: GTGTCCTGTGTTTTGTTCCAACATTTTCAGTATGAA...CAAAGTACTTAGCATCACAAAATAGCTATTAACACTGATCTTGGCAGGGACCGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| 3UTR-3UTR CAA 90 bp | TCGGTCCCTGCCAAGATCAGTGTTAATAGCTATTTTGTGATGCTAAGTACTTTGTTTCCAAACTTGTTTTaGGAACAAGTATCAGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SVPAKISVNSYFVMLSTLFPNLF*EQVSAG Trigger: TCCAGCTGATACTTGTTCCAAAAACAAGTTTGGAAA...CAAAGTACTTAGCATCACAAAATAGCTATTAACACTGATCTTGGCAGGGACCGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCTACTGGTAACCACATGACAAAAGTGATGTCACACACCACAAATTTGCTGTTAGAGATCTTTGGTTaGCTTCCAATCATTGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: CSTGNHMTKVMSHTTNLLLEIFG*LPIIEE Trigger: TTCCTCAATGATTGGAAGCAAACCAAAGATCTCTAA...CAGCAAATTTGTGGTGTGTGACATCACTTTTGTCATGTGGTTACCAGTAGAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| 3UTR TCA 72 bp | CTTATTTATTTCTGCAAAACGCCACTTGCTTTGAAATaGACTCCAGCCATCCCTGCATTTAAATTTCGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LIYFCKTPLALK*TPAIPAFKFRH Trigger: GTGACGAAATTTAAATGCAGGGATGGCTGGAGTTCATTTCAAAGCAAGTGGCGTTTTGCAGAAATAAATAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR GCA 72 bp | CTGAGAGCACTTGCTTCAGTGTCAGTATCTGAGATTTaGTTTACCAAATTTGTGTCATGCTTCTATCAACTT | + |
|
Preference number: 3 (lower is better) Translates to: LRALASVSVSEI*FTKFVSCFYQL Trigger: AAGTTGATAGAAGCATGACACAAATTTGGTAAAGCAAATCTCAGATACTGACACTGAAGCAAGTGCTCTCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR TCA 72 bp | CCTTTGCCTGTAACTAAAAAGAACTTACTAAGATCGTaGCCTTTTAGAAGATCAACTGTAGATCTTGGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: PLPVTKKNLLRS*PFRRSTVDLGY Trigger: GTAGCCAAGATCTACAGTTGATCTTCTAAAAGGTCACGATCTTAGTAAGTTCTTTTTAGTTACAGGCAAAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR TCA 72 bp | GACATAAAGAAGAAAGCCCTGTTCTTTCTGTTACAATaGAGTGTTTTAATTGCAACCCTGATCTTTCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: DIKKKALFFLLQ*SVLIATLIFLS Trigger: GCTCAGAAAGATCAGGGTTGCAATTAAAACACTTCATTGTAACAGAAAGAACAGGGCTTTCTTCTTTATGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR-3UTR CAA 90 bp | ATATCCCAATATGACATACATTCCAAGTTACCTGAGTTTAGACTTCAACTGAAGATGACACACACATTTTaGCAAGCATTACTGCTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: ISQYDIHSKLPEFRLQLKMTHTF*QALLLS Trigger: GGAAAGCAGTAATGCTTGCAAAAATGTGTGTGTCAT...CTTCAGTTGAAGTCTAAACTCAGGTAACTTGGAATGTATGTCATATTGGGATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064285.15 ENSMUST00000161494.2 |
||
| 3UTR-3UTR CAA 90 bp | ATATCCCAATATGACATACATTCCAAGTTACCTGAGTTTAGACTTCAACTGAAGTTCATACTGAAAATGTaGGAACAAAACACAGGACAC | + |
|
Preference number: 3 (lower is better) Translates to: ISQYDIHSKLPEFRLQLKFILKM*EQNTGH Trigger: GTGTCCTGTGTTTTGTTCCAACATTTTCAGTATGAA...CTTCAGTTGAAGTCTAAACTCAGGTAACTTGGAATGTATGTCATATTGGGATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064285.15 ENSMUST00000161494.2 |
||
| 3UTR TCA 72 bp | AAATCCTTATTTATTTCTGCAAAACGCCACTTGCTTTaGAATGAACTCCAGCCATCCCTGCATTTAAATTTC | + |
|
Preference number: 3 (lower is better) Translates to: KSLFISAKRHLL*NELQPSLHLNF Trigger: GAAATTTAAATGCAGGGATGGCTGGAGTTCATTTCAAAGCAAGTGGCGTTTTGCAGAAATAAATAAGGATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR TCA 72 bp | TTGCTTTACCAAATTTGTGTCATGCTTCTATCAACTTaGCTCTGTCCATTTAAACGTCTGTCAATACGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LLYQICVMLLST*LCPFKRLSIRV Trigger: AACTCGTATTGACAGACGTTTAAATGGACAGAGTCAAGTTGATAGAAGCATGACACAAATTTGGTAAAGCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR TCA 72 bp | TTGTTTTTGGAACAAGTATCAGCTGGACAGAGGAGTTaGTTCTTCTGTAATCAACATCTCAGTAGAAAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LFLEQVSAGQRS*FFCNQHLSRKF Trigger: AAACTTTCTACTGAGATGTTGATTACAGAAGAATCAACTCCTCTGTCCAGCTGATACTTGTTCCAAAAACAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| 3UTR GCA 72 bp | TCAGTATCTGAGATTTGCTTTACCAAATTTGTGTCATaGTTCTATCAACTTGACTCTGTCCATTTAAACGTC | + |
|
Preference number: 3 (lower is better) Translates to: SVSEICFTKFVS*FYQLDSVHLNV Trigger: GACGTTTAAATGGACAGAGTCAAGTTGATAGAAGCATGACACAAATTTGGTAAAGCAAATCTCAGATACTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR TCA 72 bp | AGACATACTATGAAATGCATAGTCTCCATTAAATGCTaGATGACACACACATTTTTGCAAGCATTACTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: RHTMKCIVSIKC*MTHTFLQALLL Trigger: AAGCAGTAATGCTTGCAAAAATGTGTGTGTCATTCAGCATTTAATGGAGACTATGCATTTCATAGTATGTCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGGAAGAGAGAGCAAGCGCAACAGTGTGGACGGCCGGACGGCCTGCCTGCCAAGGGGAGTGGCTGCTaGAGCTACTGCTGCGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RGKREQAQQCGRPDGLPAKGSGC*SYCCAL Trigger: AAGAGCGCAGCAGTAGCTGCAGCAGCCACTCCCCTT...GGCAGGCAGGCCGTCCGGCCGTCCACACTGTTGCGCTTGCTCTCTCTTCCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| 3UTR CAA 72 bp | CTGGCTGAGCTCTCCCGGAGGGGATTCGTGCACCTGTaGGCTAACATTGTGATGAAGCTCGGGGCACGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LAELSRRGFVHL*ANIVMKLGART Trigger: AGTCCGTGCCCCGAGCTTCATCACAATGTTAGCCAACAGGTGCACGAATCCCCTCCGGGAGAGCTCAGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS-3UTR GCA 90 bp | GAAACCCGGGAGGAAAGCTGCTCTACGGTCAGTGTTGCCAGAGCCGAGCTCTGGTGCTGCAGCTACTGCTaGGCTCTTGGACAGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ETREESCSTVSVARAELWCCSYC*ALGQKV Trigger: CACCTTCTGTCCAAGAGCGCAGCAGTAGCTGCAGCA...CCAGAGCTCGGCTCTGGCAACACTGACCGTAGAGCAGCTTTCCTCCCGGGTTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| CDS-3UTR GCA 90 bp | CTGAGATCTCATTCCCAATCCATGGACCATGGGTGGAGACCAGCTCCCCCTCTGCTCTACGGTCAGTGTTaGCAGAGCCGAGCTCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LRSHSQSMDHGWRPAPPLLYGQC*QSRALA Trigger: GGCCAGAGCTCGGCTCTGGCAACACTGACCGTAGAG...CAGAGGGGGAGCTGGTCTCCACCCATGGTCCATGGATTGGGAATGAGATCTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000162567.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGATCTCATTCCCAATCCATGGACCATGGGTGGAGACCAGCTCCCCCTCTGAAGGGGAGTGGCTGCTaGAGCTACTGCTGCGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRSHSQSMDHGWRPAPPLKGSGC*SYCCAL Trigger: AAGAGCGCAGCAGTAGCTGCAGCAGCCACTCCCCTT...CAGAGGGGGAGCTGGTCTCCACCCATGGTCCATGGATTGGGAATGAGATCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGGAAGAGAGAGCAAGCGCAACAGTGTGGACGGCCGGACGGCCTGCCTGCCTGGACAGAAGGTGTCTaGGTATCTATGCTTCGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RGKREQAQQCGRPDGLPAWTEGV*VSMLRV Trigger: TACTCGAAGCATAGATACCCAGACACCTTCTGTCCA...GGCAGGCAGGCCGTCCGGCCGTCCACACTGTTGCGCTTGCTCTCTCTTCCCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| CDS-3UTR GCA 90 bp | CTGAGATCTCATTCCCAATCCATGGACCATGGGTGGAGACCAGCTCCCCCTCTGACGTGTTCCTCCACCTaGAAGTCCTGTAGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LRSHSQSMDHGWRPAPPLTCSST*KSCRSC Trigger: GCAGCTCCTACAGGACTTGCAGGTGGAGGAACACGT...CAGAGGGGGAGCTGGTCTCCACCCATGGTCCATGGATTGGGAATGAGATCTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000162567.8 |
||
| CDS-3UTR CCA 90 bp | TACTGCTTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCAGTGGCACCGTGGCGCGGATaGGCTGCAGCAGCCGACCGG | + |
|
Preference number: 4 (lower is better) Translates to: YCFPQKLLNISRSLPRSVAPWRG*AAAADR Trigger: CCGGTCGGCTGCTGCAGCCCATCCGCGCCACGGTGC...CACTGATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAAGCAGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS-3UTR TCA 90 bp | GATGTTCAGGTCAAGTCCTCCAGTCAGCGTGGTCAGAAAGGTTCTACCTACAGCGGGGCCGAGATAGGCTaGCGAGACGCCATTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DVQVKSSSQRGQKGSTYSGAEIG*RDAISS Trigger: TGAGGAAATGGCGTCTCGTCAGCCTATCTCGGCCCC...GCTGTAGGTAGAACCTTTCTGACCACGCTGACTGGAGGACTTGACCTGAACATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS-3UTR CCA 90 bp | CACACCACAAATTTGCTGGTTCTCCTCATGTTCCCTATACCCAGGATTAGCATCGCTGGTAGGGCACCGTaGCGCGGATGGGCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HTTNLLVLLMFPIPRISIAGRAP*RGWAAA Trigger: TGCTGCAGCCCATCCGCGCCACGGTGCCCTACCAGC...GATGCTAATCCTGGGTATAGGGAACATGAGGAGAACCAGCAAATTTGTGGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS-3UTR CCA 90 bp | CTGAGATCTCATTCCCAATCCATGGACCATGGGTGGAGACCAGCTCCCCCTCTGCTACTGCTGCGCTCTTaGACAGAAGGTGTCTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LRSHSQSMDHGWRPAPPLLLLRS*TEGVWV Trigger: TACCCAGACACCTTCTGTCCAAGAGCGCAGCAGTAG...CAGAGGGGGAGCTGGTCTCCACCCATGGTCCATGGATTGGGAATGAGATCTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR TCA 90 bp | GCATTACTGCTTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCACTCCGTCTCTCAGGTaGGCTGCTCCTCCGCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALLLSTKTAEYKSVPAKITPSLR*AAPPPA Trigger: AGCCGGCGGAGGAGCAGCTCACCTGAGAGACGGAGT...GATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAAGCAGTAATGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS-3UTR TCA 90 bp | CTGAGATCTCATTCCCAATCCATGGACCATGGGTGGAGACCAGCTCCCCCTCTGGTTTTTGTCAGGACATaGAAAGAGAGGGGCCGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LRSHSQSMDHGWRPAPPLVFVRT*KERGRD Trigger: ATCTCGGCCCCTCTCTTTTCATGTCCTGACAAAAAC...CAGAGGGGGAGCTGGTCTCCACCCATGGTCCATGGATTGGGAATGAGATCTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000162567.8 |
||
| CDS-3UTR GCA 90 bp | TCCCAATATGACATACATTCCAAGTTACCTGAGTTTAGACTTCAACTGAAGTACGTGGCGCGGATGGGCTaGAGCAGCCGACCGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SQYDIHSKLPEFRLQLKYVARMG*SSRPAP Trigger: GGGAGCCGGTCGGCTGCTGCAGCCCATCCGCGCCAC...GTACTTCAGTTGAAGTCTAAACTCAGGTAACTTGGAATGTATGTCATATTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS-3UTR CCA 90 bp | GAAACCCGGGAGGAAAGCTGCTCTACGGTCAGTGTTGCCAGAGCCGAGCTCTGGGTATATCCAATGGCTTaGACACTTCTTCCTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ETREESCSTVSVARAELWVYPMA*TLLPFH Trigger: ATGGAAAGGAAGAAGTGTCCAAGCCATTGGATATAC...CCAGAGCTCGGCTCTGGCAACACTGACCGTAGAGCAGCTTTCCTCCCGGGTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| CDS-3UTR CCA 90 bp | TACTGCTTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCAGTGCTGCTGCTGCTGAGATaGCTGCTGGGCAGAGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YCFPQKLLNISRSLPRSVLLLLR*LLGRGL Trigger: GAGCCCTCTGCCCAGCAGCCATCTCAGCAGCAGCAG...CACTGATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAAGCAGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000162567.8 |
||
| CDS-3UTR CCA 90 bp | GCATTACTGCTTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCCTGCTGCTGCTGAGATaGCTGCTGGGCAGAGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALLLSTKTAEYKSVPAKILLLLR*LLGRGL Trigger: GAGCCCTCTGCCCAGCAGCCATCTCAGCAGCAGCAG...GATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAAGCAGTAATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000162567.8 |
||
| CDS-3UTR TCA 90 bp | GCATTACTGCTTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCGGGGCCGAGATAGGCTaGCGAGACGCCATTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALLLSTKTAEYKSVPAKIGAEIG*RDAISS Trigger: TGAGGAAATGGCGTCTCGTCAGCCTATCTCGGCCCC...GATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAAGCAGTAATGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000162567.8 |
||
| CDS-3UTR GCA 90 bp | GTCCCTGCCAAGATCAGTGTTAATAGCTATTTTGTGATGCTAAGTACTTTGCTGTTGGCCTGTCCACTCTaGACACGGGCGAGCCGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VPAKISVNSYFVMLSTLLLACPL*TRASRD Trigger: GTCCCGGCTCGCCCGTGTGCAGAGTGGACAGGCCAA...CAGCAAAGTACTTAGCATCACAAAATAGCTATTAACACTGATCTTGGCAGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS-3UTR GCA 90 bp | TACTGCTTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCAGTGCACAAGGGGAGTGGCTaGTGCAGCTACTGCTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: YCFPQKLLNISRSLPRSVHKGSG*CSYCCA Trigger: AGCGCAGCAGTAGCTGCAGCAGCCACTCCCCTTGTG...CACTGATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAAGCAGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR CCA 90 bp | AGGGGATTCGTGCACCTGTTGGCTAACATTGTGATGAAGCTCGGGGCACGGACTTGGACAGAAGGTGTCTaGGTATCTATGCTTCGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RGFVHLLANIVMKLGARTWTEGV*VSMLRV Trigger: TACTCGAAGCATAGATACCCAGACACCTTCTGTCCA...AGTCCGTGCCCCGAGCTTCATCACAATGTTAGCCAACAGGTGCACGAATCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS-3UTR TCA 90 bp | GGTAAGAGAGGGCCTAGAAGTTTTACAGGACAGAAAGCTGATCCGGTTGGGATGGTTGCCATGGAGAGGTaGCTGTCTGTCCTTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GKRGPRSFTGQKADPVGMVAMER*LSVLLF Trigger: AAAGAGAAGGACAGACAGTCACCTCTCCATGGCAAC...CATCCCAACCGGATCAGCTTTCTGTCCTGTAAAACTTCTAGGCCCTCTCTTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| CDS-3UTR GCA 90 bp | AGACTTCAACTGAAGTACCTGAAGCTAGGCCATAGGGTGGGCACTGTGCAACTGGTGTCTGGGTATCTATaGTTCGAGTACTACTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLQLKYLKLGHRVGTVQLVSGYL*FEYYCS Trigger: GGAGCAGTAGTACTCGAAGCATAGATACCCAGACAC...CAGTTGCACAGTGCCCACCCTATGGCCTAGCTTCAGGTACTTCAGTTGAAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064285.15 ENSMUST00000161494.2 |
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| CDS-3UTR GCA 90 bp | GCATTACTGCTTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCAAGGGGAGTGGCTGCTaGAGCTACTGCTGCGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ALLLSTKTAEYKSVPAKIKGSGC*SYCCAL Trigger: AAGAGCGCAGCAGTAGCTGCAGCAGCCACTCCCCTT...GATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAAGCAGTAATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR GCA 90 bp | TACTGCTTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCAGTGCCAGGGAGTCGGCTGTaGTGGTGTCATCAGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: YCFPQKLLNISRSLPRSVPGSRL*WCHQRE Trigger: CTCTCTCTGATGACACCAGCACAGCCGACTCCCTGG...CACTGATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAAGCAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000162567.8 |
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| CDS-3UTR CCA 90 bp | CACACCACAAATTTGCTGGTTCTCCTCATGTTCCCTATACCCAGGATTAGCATCAACATGAGGGTCCCGTaGCCACTGTCCTGTGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: HTTNLLVLLMFPIPRISINMRVP*PLSCEV Trigger: TACCTCACAGGACAGTGGCCACGGGACCCTCATGTT...GATGCTAATCCTGGGTATAGGGAACATGAGGAGAACCAGCAAATTTGTGGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS-3UTR CCA 90 bp | CTGAGATCTCATTCCCAATCCATGGACCATGGGTGGAGACCAGCTCCCCCTCTGGTATATCCAATGGCTTaGACACTTCTTCCTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LRSHSQSMDHGWRPAPPLVYPMA*TLLPFH Trigger: ATGGAAAGGAAGAAGTGTCCAAGCCATTGGATATAC...CAGAGGGGGAGCTGGTCTCCACCCATGGTCCATGGATTGGGAATGAGATCTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
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| CDS-3UTR CCA 90 bp | GCTGGCACAACAAGTTCGTGGAGGTGGCAGACATTGAAGAACAAGGGAAGCCTCAGCTCTTCGACCATCTaGTATATCCAATGGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AGTTSSWRWQTLKNKGSLSSSTI*YIQWLG Trigger: TCCAAGCCATTGGATATACCAGATGGTCGAAGAGCT...GAGGCTTCCCTTGTTCTTCAATGTCTGCCACCTCCACGAACTTGTTGTGCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| CDS-3UTR CCA 90 bp | GCATTACTGCTTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCGACACACAAGGGGAGTaGCTGCTGCAGCTACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALLLSTKTAEYKSVPAKIDTQGE*LLQLLL Trigger: CAGCAGTAGCTGCAGCAGCCACTCCCCTTGTGTGTC...GATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAAGCAGTAATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR CCA 90 bp | GCATTACTGCTTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCGCCAGAGCCGAGCTCTaGCCAGAATTAGGGGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALLLSTKTAEYKSVPAKIARAEL*PELGEF Trigger: GAACTCCCCTAATTCTGGCCAGAGCTCGGCTCTGGC...GATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAAGCAGTAATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000162567.8 |
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| CDS-3UTR CCA 90 bp | CACACCACAAATTTGCTGGTTCTCCTCATGTTCCCTATACCCAGGATTAGCATCGGGAGTCGGCTGTGCTaGTGTCATCAGAGAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: HTTNLLVLLMFPIPRISIGSRLC*CHQREM Trigger: CATCTCTCTCTGATGACACCAGCACAGCCGACTCCC...GATGCTAATCCTGGGTATAGGGAACATGAGGAGAACCAGCAAATTTGTGGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS-3UTR CCA 90 bp | AAGTCGGTCCCTGCCAAGATCAGTGTTAATAGCTATTTTGTGATGCTAAGTACTCTGCTGCTGCTGAGATaGCTGCTGGGCAGAGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KSVPAKISVNSYFVMLSTLLLLR*LLGRGL Trigger: GAGCCCTCTGCCCAGCAGCCATCTCAGCAGCAGCAG...AGTACTTAGCATCACAAAATAGCTATTAACACTGATCTTGGCAGGGACCGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000162567.8 |
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| CDS-3UTR TCA 90 bp | TTACCTGAGTTTAGACTTCAACTGAAGTACCTGAAGCTAGGCCATAGGGTGGGCGTTGCCATGGAGAGGTaGCTGTCTGTCCTTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LPEFRLQLKYLKLGHRVGVAMER*LSVLLF Trigger: AAAGAGAAGGACAGACAGTCACCTCTCCATGGCAAC...GCCCACCCTATGGCCTAGCTTCAGGTACTTCAGTTGAAGTCTAAACTCAGGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064285.15 ENSMUST00000161494.2 |
||
| CDS-3UTR GCA 90 bp | TGTATGCACACTCACGCACAGCATTTTGTAAAAATTAACACGGTATCATCACTTGTCTCTCAGGTGAGCTaGTCCTCCGCCGGCTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: CMHTHAQHFVKINTVSSLVSQVS*SSAGSR Trigger: CCGAGAGCCGGCGGAGGAGCAGCTCACCTGAGAGAC...AAGTGATGATACCGTGTTAATTTTTACAAAATGCTGTGCGTGAGTGTGCATACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS-3UTR GCA 90 bp | GCATTACTGCTTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCTGCTGCAGCTACTGCTaGGCTCTTGGACAGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALLLSTKTAEYKSVPAKICCSYC*ALGQKV Trigger: CACCTTCTGTCCAAGAGCGCAGCAGTAGCTGCAGCA...GATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAAGCAGTAATGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR GCA 90 bp | TCGGTCCCTGCCAAGATCAGTGTTAATAGCTATTTTGTGATGCTAAGTACTTTGCACAAGGGGAGTGGCTaGTGCAGCTACTGCTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVPAKISVNSYFVMLSTLHKGSG*CSYCCA Trigger: AGCGCAGCAGTAGCTGCAGCAGCCACTCCCCTTGTG...CAAAGTACTTAGCATCACAAAATAGCTATTAACACTGATCTTGGCAGGGACCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR GCA 90 bp | TCGGTCCCTGCCAAGATCAGTGTTAATAGCTATTTTGTGATGCTAAGTACTTTGCTCTACGGTCAGTGTTaGCAGAGCCGAGCTCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SVPAKISVNSYFVMLSTLLYGQC*QSRALA Trigger: GGCCAGAGCTCGGCTCTGGCAACACTGACCGTAGAG...CAAAGTACTTAGCATCACAAAATAGCTATTAACACTGATCTTGGCAGGGACCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000162567.8 |
||
| CDS-3UTR GCA 90 bp | TTACTGCTTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCAGTCCAGGGAGTCGGCTGTaGTGGTGTCATCAGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLLSTKTAEYKSVPAKISPGSRL*WCHQRE Trigger: CTCTCTCTGATGACACCAGCACAGCCGACTCCCTGG...ACTGATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAAGCAGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000162567.8 |
||
| CDS-3UTR GCA 90 bp | TACTGCTTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCAGTGACGTGTTCCTCCACCTaGAAGTCCTGTAGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YCFPQKLLNISRSLPRSVTCSST*KSCRSC Trigger: GCAGCTCCTACAGGACTTGCAGGTGGAGGAACACGT...CACTGATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAAGCAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000162567.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGTTTGTCACTCCATGCAGATAGATGTCTGAGATCTCATTCCCAATCCATGGACACACAAGGGGAGTaGCTGCTGCAGCTACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ESLSLHADRCLRSHSQSMDTQGE*LLQLLL Trigger: CAGCAGTAGCTGCAGCAGCCACTCCCCTTGTGTGTC...CATGGATTGGGAATGAGATCTCAGACATCTATCTGCATGGAGTGACAAACTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR CCA 90 bp | GCATTACTGCTTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCGGGAGTCGGCTGTGCTaGTGTCATCAGAGAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: ALLLSTKTAEYKSVPAKIGSRLC*CHQREM Trigger: CATCTCTCTCTGATGACACCAGCACAGCCGACTCCC...GATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAAGCAGTAATGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000162567.8 |
||
| CDS-3UTR CCA 90 bp | TACTGCTTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCAGTGCTACTGCTGCGCTCTTaGACAGAAGGTGTCTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: YCFPQKLLNISRSLPRSVLLLRS*TEGVWV Trigger: TACCCAGACACCTTCTGTCCAAGAGCGCAGCAGTAG...CACTGATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAAGCAGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCGGTCCCTGCCAAGATCAGTGTTAATAGCTATTTTGTGATGCTAAGTACTGACACACAAGGGGAGTaGCTGCTGCAGCTACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSVPAKISVNSYFVMLSTDTQGE*LLQLLL Trigger: CAGCAGTAGCTGCAGCAGCCACTCCCCTTGTGTGTC...AGTACTTAGCATCACAAAATAGCTATTAACACTGATCTTGGCAGGGACCGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR TCA 90 bp | GCATTACTGCTTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCGTTGCCATGGAGAGGTaGCTGTCTGTCCTTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ALLLSTKTAEYKSVPAKIVAMER*LSVLLF Trigger: AAAGAGAAGGACAGACAGTCACCTCTCCATGGCAAC...GATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAAGCAGTAATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGCTCTACAGCAAAACCATGCAGAGTCATTGAAAGCAGTAAGTTGTCACTATTCTGCTCCCTCTTCTaGCCAGCAACTAGGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSTAKPCRVIESSKLSLFCSLF*PATRCL Trigger: CAGACACCTAGTTGCTGGGCAGAAGAGGGAGCAGAA...TAGTGACAACTTACTGCTTTCAATGACTCTGCATGGTTTTGCTGTAGAGCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS-3UTR GCA 90 bp | GATGCTAAGTACTTTGCTGTTGGTGATGTTGGGAAAGTTTGTCACTCCATGCAGTGCTTCGAGTACTACTaGTCCTGTAGTGAGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DAKYFAVGDVGKVCHSMQCFEYY*SCSEQG Trigger: TCCCTGCTCACTACAGGAGCAGTAGTACTCGAAGCA...CTGCATGGAGTGACAAACTTTCCCAACATCACCAACAGCAAAGTACTTAGCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR GCA 90 bp | TACTGCTTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCAGTGTGCTTCGAGTACTACTaGTCCTGTAGTGAGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YCFPQKLLNISRSLPRSVCFEYY*SCSEQG Trigger: TCCCTGCTCACTACAGGAGCAGTAGTACTCGAAGCA...CACTGATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAAGCAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR GCA 90 bp | GTCCCTGCCAAGATCAGTGTTAATAGCTATTTTGTGATGCTAAGTACTTTGCTGTGCTGCAGCTACTGCTaGGCTCTTGGACAGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VPAKISVNSYFVMLSTLLCCSYC*ALGQKV Trigger: CACCTTCTGTCCAAGAGCGCAGCAGTAGCTGCAGCA...CAGCAAAGTACTTAGCATCACAAAATAGCTATTAACACTGATCTTGGCAGGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR GCA 90 bp | CATCTCCTAGGGATCAATGCACTTCTTATTCTAGTGTGGAATGGAATGAAGAAAAAGGGGAGTGGCTGCTaGAGCTACTGCTGCGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HLLGINALLILVWNGMKKKGSGC*SYCCAL Trigger: AAGAGCGCAGCAGTAGCTGCAGCAGCCACTCCCCTT...TTTCTTCATTCCATTCCACACTAGAATAAGAAGTGCATTGATCCCTAGGAGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064285.15 ENSMUST00000161494.2 |
||
| CDS-3UTR GCA 90 bp | TTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCAGTGTTAATACCAGGGAGTCGGCTGTaGTGGTGTCATCAGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FPQKLLNISRSLPRSVLIPGSRL*WCHQRE Trigger: CTCTCTCTGATGACACCAGCACAGCCGACTCCCTGG...TATTAACACTGATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000162567.8 |
||
| CDS-3UTR GCA 90 bp | AAGTACTTTGCTGTTGGTGATGTTGGGAAAGTTTGTCACTCCATGCAGATAGATACGTGTTCCTCCACCTaGAAGTCCTGTAGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KYFAVGDVGKVCHSMQIDTCSST*KSCRSC Trigger: GCAGCTCCTACAGGACTTGCAGGTGGAGGAACACGT...ATCTATCTGCATGGAGTGACAAACTTTCCCAACATCACCAACAGCAAAGTACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000162567.8 |
||
| CDS-3UTR CCA 90 bp | TTACTGCTTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCAGTCTACTGCTGCGCTCTTaGACAGAAGGTGTCTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LLLSTKTAEYKSVPAKISLLLRS*TEGVWV Trigger: TACCCAGACACCTTCTGTCCAAGAGCGCAGCAGTAG...ACTGATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAAGCAGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCAGTGTTAATAGACACACAAGGGGAGTaGCTGCTGCAGCTACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FPQKLLNISRSLPRSVLIDTQGE*LLQLLL Trigger: CAGCAGTAGCTGCAGCAGCCACTCCCCTTGTGTGTC...TATTAACACTGATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTCTCAATCAGCCAAAAGAATAGAGTCCGTATTCCCACAACACCCACTTTCGAGATGAAGCATACTTaGGTAACGGTGAGCTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLSISQKNRVRIPTTPTFEMKHT*VTVSYS Trigger: GGAGTAGCTCACCGTTACCCAAGTATGCTTCATCTC...GAAAGTGGGTGTTGTGGGAATACGGACTCTATTCTTTTGGCTGATTGAGAGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| CDS-3UTR CCA 90 bp | TTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCAGTGTTAATAGCCAGAGCCGAGCTCTaGCCAGAATTAGGGGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FPQKLLNISRSLPRSVLIARAEL*PELGEF Trigger: GAACTCCCCTAATTCTGGCCAGAGCTCGGCTCTGGC...TATTAACACTGATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000162567.8 |
||
| 3UTR CAA 72 bp | AGCGGTCCAGCTCTACAGCAAAACCATGCAGAGTCATaGAAAGCAGTAAGTTGTCACTACATGCTGCAACGA | + |
|
Preference number: 4 (lower is better) Translates to: SGPALQQNHAES*KAVSCHYMLQR Trigger: TCGTTGCAGCATGTAGTGACAACTTACTGCTTTCAATGACTCTGCATGGTTTTGCTGTAGAGCTGGACCGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR CAA 72 bp | TTAATTGCAACCCTGATCTTTCTGAGCTTGAAGTGGTaGAAGCCTGAGGACAGTGGGAGAGAAGGTTCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LIATLIFLSLKW*KPEDSGREGSY Trigger: GTAGGAACCTTCTCTCCCACTGTCCTCAGGCTTCAACCACTTCAAGCTCAGAAAGATCAGGGTTGCAATTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS-3UTR GCA 90 bp | TTACCTGAGTTTAGACTTCAACTGAAGTACCTGAAGCTAGGCCATAGGGTGGGCTTATTCCTTCTACATTaGAGGGTACACGGGAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LPEFRLQLKYLKLGHRVGLFLLH*RVHGKQ Trigger: CTGTTTCCCGTGTACCCTGCAATGTAGAAGGAATAA...GCCCACCCTATGGCCTAGCTTCAGGTACTTCAGTTGAAGTCTAAACTCAGGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064285.15 ENSMUST00000161494.2 |
||
| CDS-3UTR GCA 90 bp | TACTGCTTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCAGTGGTGTCTGGGTATCTATaGTTCGAGTACTACTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YCFPQKLLNISRSLPRSVVSGYL*FEYYCS Trigger: GGAGCAGTAGTACTCGAAGCATAGATACCCAGACAC...CACTGATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAAGCAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR GCA 90 bp | ACACAGGACACAGTACTAATCTGTCAGACATACTATGAAATGCATAGTCTCCATTGCTGCAGCTACTGCTaGGCTCTTGGACAGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TQDTVLICQTYYEMHSLHCCSYC*ALGQKV Trigger: CACCTTCTGTCCAAGAGCGCAGCAGTAGCTGCAGCA...ATGGAGACTATGCATTTCATAGTATGTCTGACAGATTAGTACTGTGTCCTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR GCA 90 bp | GCTGTCAATTTGAATATTGTACAAAGTGTCTGTGTGCTTACCATAACAACAAAGCACAAGGGGAGTGGCTaGTGCAGCTACTGCTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: AVNLNIVQSVCVLTITTKHKGSG*CSYCCA Trigger: AGCGCAGCAGTAGCTGCAGCAGCCACTCCCCTTGTG...CTTTGTTGTTATGGTAAGCACACAGACACTTTGTACAATATTCAAATTGACAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS-3UTR GCA 90 bp | GATGCTAAGTACTTTGCTGTTGGTGATGTTGGGAAAGTTTGTCACTCCATGCAGCTGCGTTGTAGCTGTTaGCTAAGTTTGGCAATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DAKYFAVGDVGKVCHSMQLRCSC*LSLAIC Trigger: GCAGATTGCCAAACTTAGGCAACAGCTACAACGCAG...CTGCATGGAGTGACAAACTTTCCCAACATCACCAACAGCAAAGTACTTAGCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR CCA 90 bp | GAAAGTTTGTCACTCCATGCAGATAGATGTCTGAGATCTCATTCCCAATCCATGGTTATGTGGTTGCCATaGAGAGGTGACTGTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ESLSLHADRCLRSHSQSMVMWLP*RGDCLS Trigger: GGACAGACAGTCACCTCTCCATGGCAACCACATAAC...CATGGATTGGGAATGAGATCTCAGACATCTATCTGCATGGAGTGACAAACTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR CCA 90 bp | CACACCACAAATTTGCTGGTTCTCCTCATGTTCCCTATACCCAGGATTAGCATCAGCTCTTCGACCATCTaGTATATCCAATGGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HTTNLLVLLMFPIPRISISSSTI*YIQWLG Trigger: TCCAAGCCATTGGATATACCAGATGGTCGAAGAGCT...GATGCTAATCCTGGGTATAGGGAACATGAGGAGAACCAGCAAATTTGTGGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064285.15 ENSMUST00000161494.2 |
||
| CDS-3UTR CCA 90 bp | ATCACCAGCGGCAACTTTAGACTGCAAAGTATAATTGGCAAGAAAATGGGCCTGGAGATGAAGCATACTTaGGTAACGGTGAGCTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: ITSGNFRLQSIIGKKMGLEMKHT*VTVSYS Trigger: GGAGTAGCTCACCGTTACCCAAGTATGCTTCATCTC...CAGGCCCATTTTCTTGCCAATTATACTTTGCAGTCTAAAGTTGCCGCTGGTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS-3UTR CCA 90 bp | GATGCTAAGTACTTTGCTGTTGGTGATGTTGGGAAAGTTTGTCACTCCATGCAGGAGATGAAGCATACTTaGGTAACGGTGAGCTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: DAKYFAVGDVGKVCHSMQEMKHT*VTVSYS Trigger: GGAGTAGCTCACCGTTACCCAAGTATGCTTCATCTC...CTGCATGGAGTGACAAACTTTCCCAACATCACCAACAGCAAAGTACTTAGCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR CCA 90 bp | TACTGCTTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCAGTGTCACATAGTTCTGAGTaGAGACGTGTTCCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: YCFPQKLLNISRSLPRSVSHSSE*RRVPPP Trigger: AGGTGGAGGAACACGTCTCCACTCAGAACTATGTGA...CACTGATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAAGCAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000162567.8 |
||
| CDS-3UTR TCA 90 bp | TGTATGCACACTCACGCACAGCATTTTGTAAAAATTAACACGGTATCATCACTTGTGGCCACTGTCCTGTaGGGTAAGGTCCTGTTATCG | + |
|
Preference number: 4 (lower is better) Translates to: CMHTHAQHFVKINTVSSLVATVL*GKVLLS Trigger: CGATAACAGGACCTTACCTCACAGGACAGTGGCCAC...AAGTGATGATACCGTGTTAATTTTTACAAAATGCTGTGCGTGAGTGTGCATACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS-3UTR GCA 90 bp | TTACCTGAGTTTAGACTTCAACTGAAGTACCTGAAGCTAGGCCATAGGGTGGGCTGGCTTTATCTCTCATaGATGAAGGGTAGTGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: LPEFRLQLKYLKLGHRVGWLYLS*MKGSEH Trigger: ATGTTCACTACCCTTCATGCATGAGAGATAAAGCCA...GCCCACCCTATGGCCTAGCTTCAGGTACTTCAGTTGAAGTCTAAACTCAGGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS-3UTR GCA 90 bp | AAGTCGGTCCCTGCCAAGATCAGTGTTAATAGCTATTTTGTGATGCTAAGTACTTGCTTCGAGTACTACTaGTCCTGTAGTGAGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KSVPAKISVNSYFVMLSTCFEYY*SCSEQG Trigger: TCCCTGCTCACTACAGGAGCAGTAGTACTCGAAGCA...AGTACTTAGCATCACAAAATAGCTATTAACACTGATCTTGGCAGGGACCGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR GCA 90 bp | GCTAAGTACTTTGCTGTTGGTGATGTTGGGAAAGTTTGTCACTCCATGCAGATAGTGTCTGGGTATCTATaGTTCGAGTACTACTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AKYFAVGDVGKVCHSMQIVSGYL*FEYYCS Trigger: GGAGCAGTAGTACTCGAAGCATAGATACCCAGACAC...TATCTGCATGGAGTGACAAACTTTCCCAACATCACCAACAGCAAAGTACTTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR CCA 90 bp | GATGCTAAGTACTTTGCTGTTGGTGATGTTGGGAAAGTTTGTCACTCCATGCAGAGCTCTTCGACCATCTaGTATATCCAATGGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DAKYFAVGDVGKVCHSMQSSSTI*YIQWLG Trigger: TCCAAGCCATTGGATATACCAGATGGTCGAAGAGCT...CTGCATGGAGTGACAAACTTTCCCAACATCACCAACAGCAAAGTACTTAGCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR CCA 90 bp | ATATCCCAATATGACATACATTCCAAGTTACCTGAGTTTAGACTTCAACTGAAGGCCAGAGCCGAGCTCTaGCCAGAATTAGGGGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISQYDIHSKLPEFRLQLKARAEL*PELGEF Trigger: GAACTCCCCTAATTCTGGCCAGAGCTCGGCTCTGGC...CTTCAGTTGAAGTCTAAACTCAGGTAACTTGGAATGTATGTCATATTGGGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR CAA 72 bp | CCTTCCTGTAAGGACTGTGTTAGAAACCATGAGAGGTaGTCTTTCATCGAGTCACCAATTGTGGGTCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: PSCKDCVRNHER*SFIESPIVGHD Trigger: ATCATGACCCACAATTGGTGACTCGATGAAAGACAACCTCTCATGGTTTCTAACACAGTCCTTACAGGAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS-3UTR TCA 90 bp | TCGGTCCCTGCCAAGATCAGTGTTAATAGCTATTTTGTGATGCTAAGTACTTTGCAGCAACTAGGTGTCTaGGTGGCTTTATCTCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SVPAKISVNSYFVMLSTLQQLGV*VALSLM Trigger: CATGAGAGATAAAGCCACTCAGACACCTAGTTGCTG...CAAAGTACTTAGCATCACAAAATAGCTATTAACACTGATCTTGGCAGGGACCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS-3UTR TCA 90 bp | TGTATGCACACTCACGCACAGCATTTTGTAAAAATTAACACGGTATCATCACTTTGCAGAGCGCTGATGTaGTCGTTTTTCTGCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CMHTHAQHFVKINTVSSLCRALM*SFFCSL Trigger: GAGGGAGCAGAAAAACGATCACATCAGCGCTCTGCA...AAGTGATGATACCGTGTTAATTTTTACAAAATGCTGTGCGTGAGTGTGCATACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS-3UTR TCA 90 bp | AAGTCGGTCCCTGCCAAGATCAGTGTTAATAGCTATTTTGTGATGCTAAGTACTGTTTTTGTCAGGACATaGAAAGAGAGGGGCCGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KSVPAKISVNSYFVMLSTVFVRT*KERGRD Trigger: ATCTCGGCCCCTCTCTTTTCATGTCCTGACAAAAAC...AGTACTTAGCATCACAAAATAGCTATTAACACTGATCTTGGCAGGGACCGACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000162567.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGCTCTACAGCAAAACCATGCAGAGTCATTGAAAGCAGTAAGTTGTCACTATACAGGACAGAAAGCTaGTCCGGTTGGGATGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: SSSTAKPCRVIESSKLSLYRTES*SGWDEI Trigger: AATTTCATCCCAACCGGATCAGCTTTCTGTCCTGTA...TAGTGACAACTTACTGCTTTCAATGACTCTGCATGGTTTTGCTGTAGAGCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS-3UTR GCA 90 bp | GCATTACTGCTTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCTTATTCCTTCTACATTaGAGGGTACACGGGAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: ALLLSTKTAEYKSVPAKILFLLH*RVHGKQ Trigger: CTGTTTCCCGTGTACCCTGCAATGTAGAAGGAATAA...GATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAAGCAGTAATGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR CCA 90 bp | TTACTGCTTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCAGTTGGACAGAAGGTGTCTaGGTATCTATGCTTCGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LLLSTKTAEYKSVPAKISWTEGV*VSMLRV Trigger: TACTCGAAGCATAGATACCCAGACACCTTCTGTCCA...ACTGATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAAGCAGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR CCA 90 bp | TCGGTCCCTGCCAAGATCAGTGTTAATAGCTATTTTGTGATGCTAAGTACTTTGGAGATGAAGCATACTTaGGTAACGGTGAGCTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVPAKISVNSYFVMLSTLEMKHT*VTVSYS Trigger: GGAGTAGCTCACCGTTACCCAAGTATGCTTCATCTC...CAAAGTACTTAGCATCACAAAATAGCTATTAACACTGATCTTGGCAGGGACCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCGGTCCCTGCCAAGATCAGTGTTAATAGCTATTTTGTGATGCTAAGTACTTCACATAGTTCTGAGTaGAGACGTGTTCCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: KSVPAKISVNSYFVMLSTSHSSE*RRVPPP Trigger: AGGTGGAGGAACACGTCTCCACTCAGAACTATGTGA...AGTACTTAGCATCACAAAATAGCTATTAACACTGATCTTGGCAGGGACCGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000162567.8 |
||
| 3UTR CAA 72 bp | AACCACATGACAAAAGTGATGTCACACACCACAAATTaGCTGGTTCTCCTCATGTTCCCTATACCCAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: NHMTKVMSHTTN*LVLLMFPIPRI Trigger: AATCCTGGGTATAGGGAACATGAGGAGAACCAGCAAATTTGTGGTGTGTGACATCACTTTTGTCATGTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064285.15 ENSMUST00000161494.2 |
||
| 3UTR CAA 72 bp | GGGGAATGTTTATGTAGGCTACTACTGAGGCTTTATTaGCAACACTGTAACAGTCAGTCACTGAGCAACACA | + |
|
Preference number: 4 (lower is better) Translates to: GECLCRLLLRLY*QHCNSQSLSNT Trigger: TGTGTTGCTCAGTGACTGACTGTTACAGTGTTGCAAATAAAGCCTCAGTAGTAGCCTACATAAACATTCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR CAA 72 bp | ACTCTCTGTTCCTTTCTGGGATGCAAGAGAAGCAGTTaGACATTTAGTACCCACAGGGACAAAGGAATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TLCSFLGCKRSS*TFSTHRDKGMN Trigger: ATTCATTCCTTTGTCCCTGTGGGTACTAAATGTCAAACTGCTTCTCTTGCATCCCAGAAAGGAACAGAGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| CDS-3UTR TCA 90 bp | AAGTCGGTCCCTGCCAAGATCAGTGTTAATAGCTATTTTGTGATGCTAAGTACTTACAGGACAGAAAGCTaGTCCGGTTGGGATGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: KSVPAKISVNSYFVMLSTYRTES*SGWDEI Trigger: AATTTCATCCCAACCGGATCAGCTTTCTGTCCTGTA...AGTACTTAGCATCACAAAATAGCTATTAACACTGATCTTGGCAGGGACCGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000162567.8 |
||
| CDS-3UTR TCA 90 bp | AAGTACTTTGCTGTTGGTGATGTTGGGAAAGTTTGTCACTCCATGCAGATAGATTACAGGACAGAAAGCTaGTCCGGTTGGGATGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: KYFAVGDVGKVCHSMQIDYRTES*SGWDEI Trigger: AATTTCATCCCAACCGGATCAGCTTTCTGTCCTGTA...ATCTATCTGCATGGAGTGACAAACTTTCCCAACATCACCAACAGCAAAGTACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000162567.8 |
||
| CDS-3UTR GCA 90 bp | GTCCCTGCCAAGATCAGTGTTAATAGCTATTTTGTGATGCTAAGTACTTTGCTGCTGCGTTGTAGCTGTTaGCTAAGTTTGGCAATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPAKISVNSYFVMLSTLLLRCSC*LSLAIS Trigger: AGAGATTGCCAAACTTAGGCAACAGCTACAACGCAG...CAGCAAAGTACTTAGCATCACAAAATAGCTATTAACACTGATCTTGGCAGGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCAGTGTTAATACTGCGTTGTAGCTGTTaGCTAAGTTTGGCAATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FPQKLLNISRSLPRSVLILRCSC*LSLAIC Trigger: GCAGATTGCCAAACTTAGGCAACAGCTACAACGCAG...TATTAACACTGATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR CCA 90 bp | GCTAAGTACTTTGCTGTTGGTGATGTTGGGAAAGTTTGTCACTCCATGCAGATAAATATGTTGAGATTTTaGCCTGTCCACTCTGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: AKYFAVGDVGKVCHSMQINMLRF*PVHSAH Trigger: GTGTGCAGAGTGGACAGGCCAAAATCTCAACATATT...TATCTGCATGGAGTGACAAACTTTCCCAACATCACCAACAGCAAAGTACTTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS-3UTR CCA 90 bp | GATGCTAAGTACTTTGCTGTTGGTGATGTTGGGAAAGTTTGTCACTCCATGCAGGTATATCCAATGGCTTaGACACTTCTTCCTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DAKYFAVGDVGKVCHSMQVYPMA*TLLPFH Trigger: ATGGAAAGGAAGAAGTGTCCAAGCCATTGGATATAC...CTGCATGGAGTGACAAACTTTCCCAACATCACCAACAGCAAAGTACTTAGCATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR CCA 90 bp | TCGGTCCCTGCCAAGATCAGTGTTAATAGCTATTTTGTGATGCTAAGTACTTTGAGCTCTTCGACCATCTaGTATATCCAATGGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SVPAKISVNSYFVMLSTLSSSTI*YIQWLG Trigger: TCCAAGCCATTGGATATACCAGATGGTCGAAGAGCT...CAAAGTACTTAGCATCACAAAATAGCTATTAACACTGATCTTGGCAGGGACCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCGGTCCCTGCCAAGATCAGTGTTAATAGCTATTTTGTGATGCTAAGTACTTGGACAGAAGGTGTCTaGGTATCTATGCTTCGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KSVPAKISVNSYFVMLSTWTEGV*VSMLRV Trigger: TACTCGAAGCATAGATACCCAGACACCTTCTGTCCA...AGTACTTAGCATCACAAAATAGCTATTAACACTGATCTTGGCAGGGACCGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCAGTGTTAATATCACATAGTTCTGAGTaGAGACGTGTTCCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: FPQKLLNISRSLPRSVLISHSSE*RRVPPP Trigger: AGGTGGAGGAACACGTCTCCACTCAGAACTATGTGA...TATTAACACTGATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000162567.8 |
||
| 3UTR CAA 72 bp | ACAAACAGGATGTCTATCTTAGATACTAAGATAGAATaGATTGGAGTTTTGGCAAGGGAGGGCTGTGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TNRMSILDTKIE*IGVLAREGCGL Trigger: CAGACCACAGCCCTCCCTTGCCAAAACTCCAATCAATTCTATCTTAGTATCTAAGATAGACATCCTGTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS-3UTR TCA 90 bp | TGTTGGAACAAAACACAGGACACAGTACTAATCTGTCAGACATACTATGAAATGGTTTTTGTCAGGACATaGAAAGAGAGGGGCCGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: CWNKTQDTVLICQTYYEMVFVRT*KERGRD Trigger: ATCTCGGCCCCTCTCTTTTCATGTCCTGACAAAAAC...CATTTCATAGTATGTCTGACAGATTAGTACTGTGTCCTGTGTTTTGTTCCAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064285.15 ENSMUST00000162567.8 |
||
| CDS-3UTR GCA 90 bp | AAGTACTTTGCTGTTGGTGATGTTGGGAAAGTTTGTCACTCCATGCAGATAGATTTATTCCTTCTACATTaGAGGGTACACGGGAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: KYFAVGDVGKVCHSMQIDLFLLH*RVHGKQ Trigger: CTGTTTCCCGTGTACCCTGCAATGTAGAAGGAATAA...ATCTATCTGCATGGAGTGACAAACTTTCCCAACATCACCAACAGCAAAGTACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCAGTGTTAATATTTATCTCTCATGCATaGAGGGTAGTGAACATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPQKLLNISRSLPRSVLIFISHA*RVVNMR Trigger: CCTCATGTTCACTACCCTTCATGCATGAGAGATAAA...TATTAACACTGATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR CAA 72 bp | TCTATCTTAGATACTAAGATAGAATTGATTGGAGTTTaGGCAAGGGAGGGCTGTGGTCTGTTTGATGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: SILDTKIELIGV*AREGCGLFDGS Trigger: AGATCCATCAAACAGACCACAGCCCTCCCTTGCCAAAACTCCAATCAATTCTATCTTAGTATCTAAGATAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS-3UTR GCA 90 bp | GCTGTCAATTTGAATATTGTACAAAGTGTCTGTGTGCTTACCATAACAACAAAGCTGCGTTGTAGCTGTTaGCTAAGTTTGGCAATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AVNLNIVQSVCVLTITTKLRCSC*LSLAIS Trigger: AGAGATTGCCAAACTTAGGCAACAGCTACAACGCAG...CTTTGTTGTTATGGTAAGCACACAGACACTTTGTACAATATTCAAATTGACAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS-3UTR CCA 90 bp | ACACAGGACACAGTACTAATCTGTCAGACATACTATGAAATGCATAGTCTCCATGTATATCCAATGGCTTaGACACTTCTTCCTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TQDTVLICQTYYEMHSLHVYPMA*TLLPFH Trigger: ATGGAAAGGAAGAAGTGTCCAAGCCATTGGATATAC...ATGGAGACTATGCATTTCATAGTATGTCTGACAGATTAGTACTGTGTCCTGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| 3UTR CAA 72 bp | TTTGATGTGCAGAATCACAGACCATCTGTAAGCTACTaGCATGTGGTCACTAGTCTTGTTCCTAAATGTATT | + |
|
Preference number: 4 (lower is better) Translates to: FDVQNHRPSVSY*HVVTSLVPKCI Trigger: AATACATTTAGGAACAAGACTAGTGACCACATGCAAGTAGCTTACAGATGGTCTGTGATTCTGCACATCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| CDS-3UTR GCA 90 bp | GCTGTCAATTTGAATATTGTACAAAGTGTCTGTGTGCTTACCATAACAACAAAGTTATTCCTTCTACATTaGAGGGTACACGGGAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: AVNLNIVQSVCVLTITTKLFLLH*RVHGKQ Trigger: CTGTTTCCCGTGTACCCTGCAATGTAGAAGGAATAA...CTTTGTTGTTATGGTAAGCACACAGACACTTTGTACAATATTCAAATTGACAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR CAA 72 bp | CTTCAGTGTCAGTATCTGAGATTTGCTTTACCAAATTaGTGTCATGCTTCTATCAACTTGACTCTGTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LQCQYLRFALPN*CHASINLTLSI Trigger: AATGGACAGAGTCAAGTTGATAGAAGCATGACACAAATTTGGTAAAGCAAATCTCAGATACTGACACTGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| 3UTR CAA 72 bp | TCAGAAGGGCCAGGCAAATTTTTAGAGATCTTTGGTTaGCTTCCAATCATTGAGGAATATAAAAGAAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SEGPGKFLEIFG*LPIIEEYKRNS Trigger: AGAATTTCTTTTATATTCCTCAATGATTGGAAGCAAACCAAAGATCTCTAAAAATTTGCCTGGCCCTTCTGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| CDS TCA 90 bp | CCTGTCCACTCTGCACACGGGCGAGCCGGGACTCCGTCTCTCAGGTaGGCTGCTCCTCCGCCGGCTCTCGGGGGACCGTCTCGGGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PVHSAHGRAGTPSLR*AAPPPALGGPSRAA Trigger: GGCCGCCCGAGACGGTCCCCCGAGAGCCGGCGGAGGAGCAGCTCACCTGAGAGACGGAGTCCCGGCTCGCCCGTGTGCAGAGTGGACAGG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS GCA 90 bp | CCACTCTGCACACGGGCGAGCCGGGACTCCGTCTCTCAGGTGAGCTaGTCCTCCGCCGGCTCTCGGGGGACCGTCTCGGGCGGCCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PLCTRASRDSVSQVS*SSAGSRGTVSGGPW Trigger: CCAAGGGCCGCCCGAGACGGTCCCCCGAGAGCCGGCGGAGGAGCAGCTCACCTGAGAGACGGAGTCCCGGCTCGCCCGTGTGCAGAGTGG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS CCA 90 bp | GGGGACACACAAGGGGAGTGGCTGCTGCAGCTACTGCTGCGCTCTTaGACAGAAGGTGTCTGGGTATCTATGCTTCGAGTACTACTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GDTQGEWLLQLLLRS*TEGVWVSMLRVLLL Trigger: GAGCAGTAGTACTCGAAGCATAGATACCCAGACACCTTCTGTCCAAGAGCGCAGCAGTAGCTGCAGCAGCCACTCCCCTTGTGTGTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS GCA 90 bp | TGCAGCTACTGCTGCGCTCTTGGACAGAAGGTGTCTGGGTATCTATaGTTCGAGTACTACTGCTCCTGTAGTGAGCAGGGAGCGGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CSYCCALGQKVSGYL*FEYYCSCSEQGAEL Trigger: GAGCTCCGCTCCCTGCTCACTACAGGAGCAGTAGTACTCGAAGCATAGATACCCAGACACCTTCTGTCCAAGAGCGCAGCAGTAGCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS TCA 90 bp | TTCTGCCCAGCAACTAGGTGTCTGAGTGGCTTTATCTCTCATGCATaGAGGGTAGTGAACATGAGGGTCCCGTGGCCACTGTCCTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FCPATRCLSGFISHA*RVVNMRVPWPLSCE Trigger: CTCACAGGACAGTGGCCACGGGACCCTCATGTTCACTACCCTTCATGCATGAGAGATAAAGCCACTCAGACACCTAGTTGCTGGGCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS GCA 90 bp | GCTCTTGGACAGAAGGTGTCTGGGTATCTATGCTTCGAGTACTACTaGTCCTGTAGTGAGCAGGGAGCGGAGCTCTTCGACCATCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: ALGQKVSGYLCFEYY*SCSEQGAELFDHLV Trigger: TACCAGATGGTCGAAGAGCTCCGCTCCCTGCTCACTACAGGAGCAGTAGTACTCGAAGCATAGATACCCAGACACCTTCTGTCCAAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS TCA 90 bp | TGCATGAAGGGTAGTGAACATGAGGGTCCCGTGGCCACTGTCCTGTaGGGTAAGGTCCTGTTATCGTATCCAGAGAAGAGGTTCGCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: CMKGSEHEGPVATVL*GKVLLSYPEKRFAL Trigger: TAAGGCGAACCTCTTCTCTGGATACGATAACAGGACCTTACCTCACAGGACAGTGGCCACGGGACCCTCATGTTCACTACCCTTCATGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS-3UTR CAA 90 bp | AGGGGATTCGTGCACCTGTTGGCTAACATTGTGATGAAGCTCGGGGCACGGACTCTGATTGTTATGTGGTaGCCATGGAGAGGTGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: RGFVHLLANIVMKLGARTLIVMW*PWRGDC Trigger: ACAGTCACCTCTCCATGGCAACCACATAACAATCAG...AGTCCGTGCCCCGAGCTTCATCACAATGTTAGCCAACAGGTGCACGAATCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS-3UTR CAA 90 bp | AAGAGAGGGCCTAGAAGTTTTACAGGACAGAAAGCTGATCCGGTTGGGATGAAAGCTACTGCTGCGCTCTaGGACAGAAGGTGTCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KRGPRSFTGQKADPVGMKATAAL*DRRCLG Trigger: ACCCAGACACCTTCTGTCCAAGAGCGCAGCAGTAGC...TTTCATCCCAACCGGATCAGCTTTCTGTCCTGTAAAACTTCTAGGCCCTCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| CDS-3UTR CAA 90 bp | CTGAGATCTCATTCCCAATCCATGGACCATGGGTGGAGACCAGCTCCCCCTCTGAGAGCAAATCTTCTGTaGAACAAGGACTTCCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: LRSHSQSMDHGWRPAPPLRANLL*NKDFHP Trigger: AGGATGGAAGTCCTTGTTCAACAGAAGATTTGCTCT...CAGAGGGGGAGCTGGTCTCCACCCATGGTCCATGGATTGGGAATGAGATCTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR CAA 90 bp | GATGTTCAGGTCAAGTCCTCCAGTCAGCGTGGTCAGAAAGGTTCTACCTACAGCGAATATGTTGAGATTTaGGCCTGTCCACTCTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: DVQVKSSSQRGQKGSTYSEYVEI*ACPLCT Trigger: TGTGCAGAGTGGACAGGCCAAAATCTCAACATATTC...GCTGTAGGTAGAACCTTTCTGACCACGCTGACTGGAGGACTTGACCTGAACATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
||
| CDS GCA 90 bp | TGGAGAGGTGACTGTCTGTCCTTCTCTTTACTATGCCGACTACTTTaGTTGCTGCGTTGTAGCTGTTGCCTAAGTTTGGCAATCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: WRGDCLSFSLLCRLL*LLRCSCCLSLAICS Trigger: AGAGCAGATTGCCAAACTTAGGCAACAGCTACAACGCAGCAAGCAAAGTAGTCGGCATAGTAAAGAGAAGGACAGACAGTCACCTCTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR CAA 90 bp | TCGGTCCCTGCCAAGATCAGTGTTAATAGCTATTTTGTGATGCTAAGTACTTTGGCTACTGCTGCGCTCTaGGACAGAAGGTGTCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SVPAKISVNSYFVMLSTLATAAL*DRRCLG Trigger: ACCCAGACACCTTCTGTCCAAGAGCGCAGCAGTAGC...CAAAGTACTTAGCATCACAAAATAGCTATTAACACTGATCTTGGCAGGGACCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR CAA 90 bp | AAGTCGGTCCCTGCCAAGATCAGTGTTAATAGCTATTTTGTGATGCTAAGTACTGCTACTGCTGCGCTCTaGGACAGAAGGTGTCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KSVPAKISVNSYFVMLSTATAAL*DRRCLG Trigger: ACCCAGACACCTTCTGTCCAAGAGCGCAGCAGTAGC...AGTACTTAGCATCACAAAATAGCTATTAACACTGATCTTGGCAGGGACCGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR CAA 90 bp | AAGAGAGGGCCTAGAAGTTTTACAGGACAGAAAGCTGATCCGGTTGGGATGAAAGGAGATGAAGCATACTaGGGTAACGGTGAGCTACTC | + |
|
Preference number: 5 (lower is better) Translates to: KRGPRSFTGQKADPVGMKGDEAY*GNGELL Trigger: GAGTAGCTCACCGTTACCCAAGTATGCTTCATCTCC...TTTCATCCCAACCGGATCAGCTTTCTGTCCTGTAAAACTTCTAGGCCCTCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
||
| CDS GCA 90 bp | TGGAGAGGTGACTGTCTGTCCTTCTCTTTACTATGCCGACTACTTTaGTTGCTGCGTTGTAGCTGTTGCCTAAGTTTGGCAATCTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: WRGDCLSFSLLCRLL*LLRCSCCLSLAISF Trigger: GAAAGAGATTGCCAAACTTAGGCAACAGCTACAACGCAGCAAGCAAAGTAGTCGGCATAGTAAAGAGAAGGACAGACAGTCACCTCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000162383.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCAGTGTTAATAGCTACTGCTGCGCTCTaGGACAGAAGGTGTCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: FPQKLLNISRSLPRSVLIATAAL*DRRCLG Trigger: ACCCAGACACCTTCTGTCCAAGAGCGCAGCAGTAGC...TATTAACACTGATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR CAA 90 bp | GCTAAGTACTTTGCTGTTGGTGATGTTGGGAAAGTTTGTCACTCCATGCAGATAGGAGATGAAGCATACTaGGGTAACGGTGAGCTACTC | + |
|
Preference number: 5 (lower is better) Translates to: AKYFAVGDVGKVCHSMQIGDEAY*GNGELL Trigger: GAGTAGCTCACCGTTACCCAAGTATGCTTCATCTCC...TATCTGCATGGAGTGACAAACTTTCCCAACATCACCAACAGCAAAGTACTTAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGTTTGTCACTCCATGCAGATAGATGTCTGAGATCTCATTCCCAATCCATGGAATTAGGGGAGTTCTaGAGCATCAGGTCAGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ESLSLHADRCLRSHSQSMELGEF*SIRSEA Trigger: TGCCTCTGACCTGATGCTCAAGAACTCCCCTAATTC...CATGGATTGGGAATGAGATCTCAGACATCTATCTGCATGGAGTGACAAACTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000162567.8 |
||
| CDS-3UTR CAA 90 bp | GCTAAGTACTTTGCTGTTGGTGATGTTGGGAAAGTTTGTCACTCCATGCAGATAGAATTAGGGGAGTTCTaGAGCATCAGGTCAGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: AKYFAVGDVGKVCHSMQIELGEF*SIRSEA Trigger: TGCCTCTGACCTGATGCTCAAGAACTCCCCTAATTC...TATCTGCATGGAGTGACAAACTTTCCCAACATCACCAACAGCAAAGTACTTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000162567.8 |
||
| CDS-3UTR CAA 90 bp | TTACCTGAGTTTAGACTTCAACTGAAGTACCTGAAGCTAGGCCATAGGGTGGGCGGGAAACAGATGATTTaGGCACTGATATGTTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: LPEFRLQLKYLKLGHRVGGKQMI*ALICLT Trigger: TGTCAAACATATCAGTGCCAAAATCATCTGTTTCCC...GCCCACCCTATGGCCTAGCTTCAGGTACTTCAGTTGAAGTCTAAACTCAGGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064285.15 ENSMUST00000161494.2 |
||
| CDS-3UTR CAA 90 bp | TACTGCTTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCAGTGCTTATTCCTTCTACATaGCAGGGTACACGGGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: YCFPQKLLNISRSLPRSVLIPST*QGTRET Trigger: TGTTTCCCGTGTACCCTGCAATGTAGAAGGAATAAG...CACTGATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAAGCAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR CAA 90 bp | GTCCCTGCCAAGATCAGTGTTAATAGCTATTTTGTGATGCTAAGTACTTTGCTGGGAGATGAAGCATACTaGGGTAACGGTGAGCTACTC | + |
|
Preference number: 5 (lower is better) Translates to: VPAKISVNSYFVMLSTLLGDEAY*GNGELL Trigger: GAGTAGCTCACCGTTACCCAAGTATGCTTCATCTCC...CAGCAAAGTACTTAGCATCACAAAATAGCTATTAACACTGATCTTGGCAGGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR CAA 90 bp | TCGGTCCCTGCCAAGATCAGTGTTAATAGCTATTTTGTGATGCTAAGTACTTTGGGAGATGAAGCATACTaGGGTAACGGTGAGCTACTC | + |
|
Preference number: 5 (lower is better) Translates to: SVPAKISVNSYFVMLSTLGDEAY*GNGELL Trigger: GAGTAGCTCACCGTTACCCAAGTATGCTTCATCTCC...CAAAGTACTTAGCATCACAAAATAGCTATTAACACTGATCTTGGCAGGGACCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR CAA 90 bp | GATGCTAAGTACTTTGCTGTTGGTGATGTTGGGAAAGTTTGTCACTCCATGCAGAGCTGTTGCCTAAGTTaGGCAATCTGCTCTTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: DAKYFAVGDVGKVCHSMQSCCLS*AICSFS Trigger: ACTGAAAGAGCAGATTGCCAAACTTAGGCAACAGCT...CTGCATGGAGTGACAAACTTTCCCAACATCACCAACAGCAAAGTACTTAGCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR CAA 90 bp | AAGTACTTTGCTGTTGGTGATGTTGGGAAAGTTTGTCACTCCATGCAGATAGATCTGATTGTTATGTGGTaGCCATGGAGAGGTGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: KYFAVGDVGKVCHSMQIDLIVMW*PWRGDC Trigger: ACAGTCACCTCTCCATGGCAACCACATAACAATCAG...ATCTATCTGCATGGAGTGACAAACTTTCCCAACATCACCAACAGCAAAGTACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGTTTGTCACTCCATGCAGATAGATGTCTGAGATCTCATTCCCAATCCATGCTTATTCCTTCTACATaGCAGGGTACACGGGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: ESLSLHADRCLRSHSQSMLIPST*QGTRET Trigger: TGTTTCCCGTGTACCCTGCAATGTAGAAGGAATAAG...CATGGATTGGGAATGAGATCTCAGACATCTATCTGCATGGAGTGACAAACTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
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| CDS-3UTR CAA 90 bp | TTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCAGTGTTAATAGAATTAGGGGAGTTCTaGAGCATCAGGTCAGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: FPQKLLNISRSLPRSVLIELGEF*SIRSEA Trigger: TGCCTCTGACCTGATGCTCAAGAACTCCCCTAATTC...TATTAACACTGATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000162567.8 |
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| CDS-3UTR CAA 90 bp | GAAAGTTTGTCACTCCATGCAGATAGATGTCTGAGATCTCATTCCCAATCCATGAGCTGTTGCCTAAGTTaGGCAATCTGCTCTTTCAGT | + |
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Preference number: 5 (lower is better) Translates to: ESLSLHADRCLRSHSQSMSCCLS*AICSFS Trigger: ACTGAAAGAGCAGATTGCCAAACTTAGGCAACAGCT...CATGGATTGGGAATGAGATCTCAGACATCTATCTGCATGGAGTGACAAACTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161494.2 ENSMUST00000162567.8 |
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| CDS-3UTR CAA 90 bp | ACACAGGACACAGTACTAATCTGTCAGACATACTATGAAATGCATAGTCTCCATCTGATTGTTATGTGGTaGCCATGGAGAGGTGACTGT | + |
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Preference number: 5 (lower is better) Translates to: TQDTVLICQTYYEMHSLHLIVMW*PWRGDC Trigger: ACAGTCACCTCTCCATGGCAACCACATAACAATCAG...ATGGAGACTATGCATTTCATAGTATGTCTGACAGATTAGTACTGTGTCCTGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161494.2 ENSMUST00000162567.8 |
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| CDS-3UTR CAA 90 bp | AAGTCGGTCCCTGCCAAGATCAGTGTTAATAGCTATTTTGTGATGCTAAGTACTCTTATTCCTTCTACATaGCAGGGTACACGGGAAACA | + |
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Preference number: 5 (lower is better) Translates to: KSVPAKISVNSYFVMLSTLIPST*QGTRET Trigger: TGTTTCCCGTGTACCCTGCAATGTAGAAGGAATAAG...AGTACTTAGCATCACAAAATAGCTATTAACACTGATCTTGGCAGGGACCGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
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| CDS-3UTR CAA 90 bp | TTACTGCTTTCCACAAAAACTGCTGAATATAAGTCGGTCCCTGCCAAGATCAGTAGAGCAAATCTTCTGTaGAACAAGGACTTCCATCCT | + |
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Preference number: 5 (lower is better) Translates to: LLLSTKTAEYKSVPAKISRANLL*NKDFHP Trigger: AGGATGGAAGTCCTTGTTCAACAGAAGATTTGCTCT...ACTGATCTTGGCAGGGACCGACTTATATTCAGCAGTTTTTGTGGAAAGCAGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
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| CDS-3UTR CAA 90 bp | ACACAGGACACAGTACTAATCTGTCAGACATACTATGAAATGCATAGTCTCCATCTTATTCCTTCTACATaGCAGGGTACACGGGAAACA | + |
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Preference number: 5 (lower is better) Translates to: TQDTVLICQTYYEMHSLHLIPST*QGTRET Trigger: TGTTTCCCGTGTACCCTGCAATGTAGAAGGAATAAG...ATGGAGACTATGCATTTCATAGTATGTCTGACAGATTAGTACTGTGTCCTGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064285.15 ENSMUST00000161494.2 ENSMUST00000162567.8 |
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| CDS-3UTR CAA 90 bp | GTCCCTGCCAAGATCAGTGTTAATAGCTATTTTGTGATGCTAAGTACTTTGCTGAGAGCAAATCTTCTGTaGAACAAGGACTTCCATCCT | + |
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Preference number: 5 (lower is better) Translates to: VPAKISVNSYFVMLSTLLRANLL*NKDFHP Trigger: AGGATGGAAGTCCTTGTTCAACAGAAGATTTGCTCT...CAGCAAAGTACTTAGCATCACAAAATAGCTATTAACACTGATCTTGGCAGGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
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| CDS-3UTR CAA 90 bp | AAGTACTTTGCTGTTGGTGATGTTGGGAAAGTTTGTCACTCCATGCAGATAGATAGAGCAAATCTTCTGTaGAACAAGGACTTCCATCCT | + |
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Preference number: 5 (lower is better) Translates to: KYFAVGDVGKVCHSMQIDRANLL*NKDFHP Trigger: AGGATGGAAGTCCTTGTTCAACAGAAGATTTGCTCT...ATCTATCTGCATGGAGTGACAAACTTTCCCAACATCACCAACAGCAAAGTACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
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| CDS-3UTR CAA 90 bp | AAGGACAGCAAACATGAATTCATGAATACACATGTTAGATATGCCTACAGAGAACTGATTGTTATGTGGTaGCCATGGAGAGGTGACTGT | + |
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Preference number: 5 (lower is better) Translates to: KDSKHEFMNTHVRYAYRELIVMW*PWRGDC Trigger: ACAGTCACCTCTCCATGGCAACCACATAACAATCAG...TTCTCTGTAGGCATATCTAACATGTGTATTCATGAATTCATGTTTGCTGTCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161494.2 |
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| CDS-3UTR CAA 90 bp | AAGTACTTTGCTGTTGGTGATGTTGGGAAAGTTTGTCACTCCATGCAGATAGATGGGAAACAGATGATTTaGGCACTGATATGTTTGACA | + |
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Preference number: 5 (lower is better) Translates to: KYFAVGDVGKVCHSMQIDGKQMI*ALICLT Trigger: TGTCAAACATATCAGTGCCAAAATCATCTGTTTCCC...ATCTATCTGCATGGAGTGACAAACTTTCCCAACATCACCAACAGCAAAGTACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
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| CDS-3UTR CAA 90 bp | GTCCCTGCCAAGATCAGTGTTAATAGCTATTTTGTGATGCTAAGTACTTTGCTGGGGAAACAGATGATTTaGGCACTGATATGTTTGACA | + |
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Preference number: 5 (lower is better) Translates to: VPAKISVNSYFVMLSTLLGKQMI*ALICLT Trigger: TGTCAAACATATCAGTGCCAAAATCATCTGTTTCCC...CAGCAAAGTACTTAGCATCACAAAATAGCTATTAACACTGATCTTGGCAGGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
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| CDS CCA 72 bp | TGTGCTGGCTGCCCCGCAGGAGCTGGTAGGGCACCGTaGCGCGGATGGGCTGCAGCAGCCGACCGGCTCCCG | + |
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Preference number: 6 (lower is better) Translates to: CAGCPAGAGRAP*RGWAAAADRLP Trigger: CGGGAGCCGGTCGGCTGCTGCAGCCCATCCGCGCCACGGTGCCCTACCAGCTCCTGCGGGGCAGCCAGCACA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| CDS GCA 72 bp | ACACGGGCGAGCCGGGACTCCGTCTCTCAGGTGAGCTaGTCCTCCGCCGGCTCTCGGGGGACCGTCTCGGGC | + |
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Preference number: 6 (lower is better) Translates to: TRASRDSVSQVS*SSAGSRGTVSG Trigger: GCCCGAGACGGTCCCCCGAGAGCCGGCGGAGGAGCAGCTCACCTGAGAGACGGAGTCCCGGCTCGCCCGTGT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| CDS GCA 72 bp | AGGTTCGAATATGTTGAGATTTTGGCCTGTCCACTCTaGACACGGGCGAGCCGGGACTCCGTCTCTCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: RFEYVEILACPL*TRASRDSVSQV Trigger: CACCTGAGAGACGGAGTCCCGGCTCGCCCGTGTGCAGAGTGGACAGGCCAAAATCTCAACATATTCGAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| CDS GCA 72 bp | ATGGGGACACACAAGGGGAGTGGCTGCTGCAGCTACTaGTGCGCTCTTGGACAGAAGGTGTCTGGGTATCTA | + |
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Preference number: 6 (lower is better) Translates to: MGTHKGSGCCSY*CALGQKVSGYL Trigger: TAGATACCCAGACACCTTCTGTCCAAGAGCGCAGCAGTAGCTGCAGCAGCCACTCCCCTTGTGTGTCCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
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| CDS TCA 72 bp | GGTAGTGAACATGAGGGTCCCGTGGCCACTGTCCTGTaGGGTAAGGTCCTGTTATCGTATCCAGAGAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: GSEHEGPVATVL*GKVLLSYPEKR Trigger: CCTCTTCTCTGGATACGATAACAGGACCTTACCTCACAGGACAGTGGCCACGGGACCCTCATGTTCACTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| CDS GCA 72 bp | CAGAAGGTGTCTGGGTATCTATGCTTCGAGTACTACTaGTCCTGTAGTGAGCAGGGAGCGGAGCTCTTCGAC | + |
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Preference number: 6 (lower is better) Translates to: QKVSGYLCFEYY*SCSEQGAELFD Trigger: GTCGAAGAGCTCCGCTCCCTGCTCACTACAGGAGCAGTAGTACTCGAAGCATAGATACCCAGACACCTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
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| CDS TCA 72 bp | GCAACTAGGTGTCTGAGTGGCTTTATCTCTCATGCATaGAGGGTAGTGAACATGAGGGTCCCGTGGCCACTG | + |
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Preference number: 6 (lower is better) Translates to: ATRCLSGFISHA*RVVNMRVPWPL Trigger: CAGTGGCCACGGGACCCTCATGTTCACTACCCTTCATGCATGAGAGATAAAGCCACTCAGACACCTAGTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| CDS GCA 72 bp | TGCTGCGCTCTTGGACAGAAGGTGTCTGGGTATCTATaGTTCGAGTACTACTGCTCCTGTAGTGAGCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: CCALGQKVSGYL*FEYYCSCSEQG Trigger: TCCCTGCTCACTACAGGAGCAGTAGTACTCGAAGCATAGATACCCAGACACCTTCTGTCCAAGAGCGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
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| CDS CCA 72 bp | CCTGTAGTGAGCAGGGAGCGGAGCTCTTCGACCATCTaGTATATCCAATGGCTTGGACACTTCTTCCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: PVVSRERSSSTI*YIQWLGHFFLS Trigger: GGAAAGGAAGAAGTGTCCAAGCCATTGGATATACCAGATGGTCGAAGAGCTCCGCTCCCTGCTCACTACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
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| CDS CAA 90 bp | ATCCAGAGAAGAGGTTCGCCTTATTGTACTAGAGGTTCGAATATGTaGAGATTTTGGCCTGTCCACTCTGCACACGGGCGAGCCGGGACT | + |
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Preference number: 6 (lower is better) Translates to: IQRRGSPYCTRGSNM*RFWPVHSAHGRAGT Trigger: AGTCCCGGCTCGCCCGTGTGCAGAGTGGACAGGCCAAAATCTCAACATATTCGAACCTCTAGTACAATAAGGCGAACCTCTTCTCTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| CDS CCA 72 bp | CCTTATTGTACTAGAGGTTCGAATATGTTGAGATTTTaGCCTGTCCACTCTGCACACGGGCGAGCCGGGACT | + |
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Preference number: 6 (lower is better) Translates to: PYCTRGSNMLRF*PVHSAHGRAGT Trigger: AGTCCCGGCTCGCCCGTGTGCAGAGTGGACAGGCCAAAATCTCAACATATTCGAACCTCTAGTACAATAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| CDS TCA 72 bp | GAGGTTCGCCTTATTGTACTAGAGGTTCGAATATGTTaGGATTTTGGCCTGTCCACTCTGCACACGGGCGAG | + |
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Preference number: 6 (lower is better) Translates to: EVRLIVLEVRIC*DFGLSTLHTGE Trigger: CTCGCCCGTGTGCAGAGTGGACAGGCCAAAATCTCAACATATTCGAACCTCTAGTACAATAAGGCGAACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| CDS GCA 72 bp | CCATGGAGAGGTGACTGTCTGTCCTTCTCTTTACTATaGCGACTACTTTGCTTGCTGCGTTGTAGCTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: PWRGDCLSFSLL*RLLCLLRCSCC Trigger: GCAACAGCTACAACGCAGCAAGCAAAGTAGTCGGCATAGTAAAGAGAAGGACAGACAGTCACCTCTCCATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162383.8 ENSMUST00000162567.8 |
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| CDS CAA 72 bp | AGAGGTTCGCCTTATTGTACTAGAGGTTCGAATATGTaGAGATTTTGGCCTGTCCACTCTGCACACGGGCGA | + |
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Preference number: 6 (lower is better) Translates to: RGSPYCTRGSNM*RFWPVHSAHGR Trigger: TCGCCCGTGTGCAGAGTGGACAGGCCAAAATCTCAACATATTCGAACCTCTAGTACAATAAGGCGAACCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064285.15 |
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| CDS CAA 90 bp | AGCTACTCCCACTGTCTTTATCACGATCATAGAGCAAATCTTCTGTaGAACAAGGACTTCCATCCTGGGATTCCGGAGGACAAAATGGGG | + |
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Preference number: 6 (lower is better) Translates to: SYSHCLYHDHRANLL*NKDFHPGIPEDKMG Trigger: CCCCATTTTGTCCTCCGGAATCCCAGGATGGAAGTCCTTGTTCAACAGAAGATTTGCTCTATGATCGTGATAAAGACAGTGGGAGTAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
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| CDS CCA 72 bp | TGTAGCTGTTGTTGGGTTTGGGAGATGAAGCATACTTaGGTAACGGTGAGCTACTCCCACTGTCTTTATCAC | + |
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Preference number: 6 (lower is better) Translates to: CSCCWVWEMKHT*VTVSYSHCLYH Trigger: GTGATAAAGACAGTGGGAGTAGCTCACCGTTACCCAAGTATGCTTCATCTCCCAAACCCAACAACAGCTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
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| CDS CAA 72 bp | CACTGTCTTTATCACGATCATAGAGCAAATCTTCTGTaGAACAAGGACTTCCATCCTGGGATTCCGGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: HCLYHDHRANLL*NKDFHPGIPED Trigger: GTCCTCCGGAATCCCAGGATGGAAGTCCTTGTTCAACAGAAGATTTGCTCTATGATCGTGATAAAGACAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
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| CDS GCA 72 bp | ATACCTTTTCCAATTCAGGACTTATTCCTTCTACATTaGAGGGTACACGGGAAACAGATGATTTTGGCACTG | + |
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Preference number: 6 (lower is better) Translates to: IPFPIQDLFLLH*RVHGKQMILAL Trigger: CAGTGCCAAAATCATCTGTTTCCCGTGTACCCTGCAATGTAGAAGGAATAAGTCCTGAATTGGAAAAGGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
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| CDS CAA 72 bp | AATACCTTTTCCAATTCAGGACTTATTCCTTCTACATaGCAGGGTACACGGGAAACAGATGATTTTGGCACT | + |
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Preference number: 6 (lower is better) Translates to: NTFSNSGLIPST*QGTRETDDFGT Trigger: AGTGCCAAAATCATCTGTTTCCCGTGTACCCTGCAATGTAGAAGGAATAAGTCCTGAATTGGAAAAGGTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000064285.15 ENSMUST00000161217.8 ENSMUST00000161494.2 ENSMUST00000162567.8 |
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