Pregenerated sensors for GLB1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026200Ensembl transcript IDs: ENSMUST00000113623.8, ENSMUST00000155716.8, ENSMUST00000185448.2, ENSMUST00000186173.7, ENSMUST00000189663.7
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCCTCCAAGGCCTCATTCCCTTTCACTACCTCGACTTCTCTTTCTaGTCCACACGTTGCCTTCGAGACCATCGCAGTCAGGCGGGGAGA | + |
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Preference number: 1 (lower is better) Translates to: SLQGLIPFHYLDFSF*STRCLRDHRSQAGR Trigger: TCTCCCCGCCTGACTGCGATGGTCTCGAAGGCAACGTGTGGAGCAGAAAGAGAAGTCGAGGTAGTGAAAGGGAATGAGGCCTTGGAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
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| 3UTR GCA 90 bp | GCCCGGCAGGCTGTCCAATCATTTTCCTTCCTTTTGTTCAGACGCTaGTGGAGTTGTGGAGTGTCCCTCCAAGGCCTCATTCCCTTTCAC | + |
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Preference number: 1 (lower is better) Translates to: ARQAVQSFSFLLFRR*WSCGVSLQGLIPFH Trigger: GTGAAAGGGAATGAGGCCTTGGAGGGACACTCCACAACTCCAGCAGCGTCTGAACAAAAGGAAGGAAAATGATTGGACAGCCTGCCGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
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| 3UTR GCA 90 bp | TTATCCACCTTGAGAGGGAACATCATCCACTCAGTGAGGATGGTCTaGCCCAGCAGTGGTGCTTCTAACAGGCCCTTGAAGTCACTGTGG | + |
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Preference number: 1 (lower is better) Translates to: LSTLRGNIIHSVRMV*PSSGASNRPLKSLW Trigger: CCACAGTGACTTCAAGGGCCTGTTAGAAGCACCACTGCTGGGGCAGACCATCCTCACTGAGTGGATGATGTTCCCTCTCAAGGTGGATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
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| 3UTR CCA 90 bp | CGGCAGGCTGTCCAATCATTTTCCTTCCTTTTGTTCAGACGCTGCTaGAGTTGTGGAGTGTCCCTCCAAGGCCTCATTCCCTTTCACTAC | + |
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Preference number: 1 (lower is better) Translates to: RQAVQSFSFLLFRRC*SCGVSLQGLIPFHY Trigger: GTAGTGAAAGGGAATGAGGCCTTGGAGGGACACTCCACAACTCCAGCAGCGTCTGAACAAAAGGAAGGAAAATGATTGGACAGCCTGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
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| 3UTR TCA 90 bp | TCATGGAGAAGAATCTTGATGCCTATGATTACAACAAGGCTCGGGTaGGCTGGAAAAGGAGCTACAGAGCGGAGGGCATCAGAGATCCTC | + |
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Preference number: 1 (lower is better) Translates to: SWRRILMPMITTRLG*AGKGATERRASEIL Trigger: GAGGATCTCTGATGCCCTCCGCTCTGTAGCTCCTTTTCCAGCTCACCCGAGCCTTGTTGTAATCATAGGCATCAAGATTCTTCTCCATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
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| 3UTR CCA 90 bp | GAGAAGAATCTTGATGCCTATGATTACAACAAGGCTCGGGTGAGCTaGAAAAGGAGCTACAGAGCGGAGGGCATCAGAGATCCTCATAGG | + |
|
Preference number: 1 (lower is better) Translates to: EKNLDAYDYNKARVS*KRSYRAEGIRDPHR Trigger: CCTATGAGGATCTCTGATGCCCTCCGCTCTGTAGCTCCTTTTCCAGCTCACCCGAGCCTTGTTGTAATCATAGGCATCAAGATTCTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
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| 3UTR CCA 90 bp | TGTCCAATCATTTTCCTTCCTTTTGTTCAGACGCTGCTGGAGTTGTaGAGTGTCCCTCCAAGGCCTCATTCCCTTTCACTACCTCGACTT | + |
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Preference number: 1 (lower is better) Translates to: CPIIFLPFVQTLLEL*SVPPRPHSLSLPRL Trigger: AAGTCGAGGTAGTGAAAGGGAATGAGGCCTTGGAGGGACACTCCACAACTCCAGCAGCGTCTGAACAAAAGGAAGGAAAATGATTGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
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| 3UTR CCA 90 bp | CCCTGCTTCAGATATGGGTGCATCATAGTCGTAGCTGGTAGTAATTaGAAGGAAGCGTCCCTTCTCGTCAGCTCCATTCCAGTATCCAAA | + |
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Preference number: 1 (lower is better) Translates to: PCFRYGCIIVVAGSN*KEASLLVSSIPVSK Trigger: TTTGGATACTGGAATGGAGCTGACGAGAAGGGACGCTTCCTTCCAATTACTACCAGCTACGACTATGATGCACCCATATCTGAAGCAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
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| 3UTR CCA 90 bp | TTAACAGCCTCAAAGGTCAATGGCAAAACTGAATGGATTGGGCCTTaGGGGCAGAGAAAGTCTAGGAAAGACAGCAAATTCCCATCCAGG | + |
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Preference number: 1 (lower is better) Translates to: LTASKVNGKTEWIGP*GQRKSRKDSKFPSR Trigger: CCTGGATGGGAATTTGCTGTCTTTCCTAGACTTTCTCTGCCCCCAAGGCCCAATCCATTCAGTTTTGCCATTGACCTTTGAGGCTGTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
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| 3UTR CCA 90 bp | CCATGGTCCAGTTTAACAGCCTCAAAGGTCAATGGCAAAACTGAATaGATTGGGCCTTGGGGGCAGAGAAAGTCTAGGAAAGACAGCAAA | + |
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Preference number: 1 (lower is better) Translates to: PWSSLTASKVNGKTE*IGPWGQRKSRKDSK Trigger: TTTGCTGTCTTTCCTAGACTTTCTCTGCCCCCAAGGCCCAATCCATTCAGTTTTGCCATTGACCTTTGAGGCTGTTAAACTGGACCATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
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| 3UTR GCA 90 bp | AATTGCAAAAAGCTTAGGTGTAGGGTCCCCTGCTTCAGATATGGGTaGATCATAGTCGTAGCTGGTAGTAATTGGAAGGAAGCGTCCCTT | + |
|
Preference number: 1 (lower is better) Translates to: NCKKLRCRVPCFRYG*IIVVAGSNWKEASL Trigger: AAGGGACGCTTCCTTCCAATTACTACCAGCTACGACTATGATGCACCCATATCTGAAGCAGGGGACCCTACACCTAAGCTTTTTGCAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
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| 3UTR GCA 90 bp | GCTGATGACATTTCGAATTGCAAAAAGCTTAGGTGTAGGGTCCCCTaGTTCAGATATGGGTGCATCATAGTCGTAGCTGGTAGTAATTGG | + |
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Preference number: 1 (lower is better) Translates to: ADDISNCKKLRCRVP*FRYGCIIVVAGSNW Trigger: CCAATTACTACCAGCTACGACTATGATGCACCCATATCTGAAGCAGGGGACCCTACACCTAAGCTTTTTGCAATTCGAAATGTCATCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
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| 3UTR CCA 90 bp | AAGGACACCCAGGAATCGAGGCAAAGACAGGGCCACGAAGGTGTGTaGAGCCAGTACTGTCTTTGGAATTTTAATCATAATAAAGTTTGG | + |
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Preference number: 1 (lower is better) Translates to: KDTQESRQRQGHEGV*SQYCLWNFNHNKVW Trigger: CCAAACTTTATTATGATTAAAATTCCAAAGACAGTACTGGCTCCACACACCTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
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| 3UTR GCA 90 bp | TCAAAGGAACCTTGTGTTTCTGAGAGAAGAAAGTTATACCCCCAATaGAAAGTGCTATTGAGGATAGGCTTATCCAAAAACTGGACTTGG | + |
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Preference number: 1 (lower is better) Translates to: SKEPCVSERRKLYPQ*KVLLRIGLSKNWTW Trigger: CCAAGTCCAGTTTTTGGATAAGCCTATCCTCAATAGCACTTTGCATTGGGGGTATAACTTTCTTCTCTCAGAAACACAAGGTTCCTTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
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| 3UTR CAA 90 bp | CCTCATTCCCTTTCACTACCTCGACTTCTCTTTCTGCTCCACACGTaGCCTTCGAGACCATCGCAGTCAGGCGGGGAGACCTTCATCTTG | + |
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Preference number: 2 (lower is better) Translates to: PHSLSLPRLLFLLHT*PSRPSQSGGETFIL Trigger: CAAGATGAAGGTCTCCCCGCCTGACTGCGATGGTCTCGAAGGCAACGTGTGGAGCAGAAAGAGAAGTCGAGGTAGTGAAAGGGAATGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
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| 3UTR CAA 90 bp | CAAGAAATGGAGGCCCGGCAGGCTGTCCAATCATTTTCCTTCCTTTaGTTCAGACGCTGCTGGAGTTGTGGAGTGTCCCTCCAAGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: QEMEARQAVQSFSFL*FRRCWSCGVSLQGL Trigger: GAGGCCTTGGAGGGACACTCCACAACTCCAGCAGCGTCTGAACAAAAGGAAGGAAAATGATTGGACAGCCTGCCGGGCCTCCATTTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
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| 3UTR-3UTR CCA 90 bp | CACTACCTCGACTTCTCTTTCTGCTCCACACGTTGCCTTCGAGACCATCGCAGTGGCCACGAAGGTGTGTaGAGCCAGTACTGTCTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: HYLDFSFCSTRCLRDHRSGHEGV*SQYCLW Trigger: CCAAAGACAGTACTGGCTCCACACACCTTCGTGGCC...ACTGCGATGGTCTCGAAGGCAACGTGTGGAGCAGAAAGAGAAGTCGAGGTAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCGCATTGTCCAGTACCGGCCCAAGTTAAACCCATTGATCCACACTTGGCCCCAAGCTTATCCACCTTaGGAGGGAACATCATCCACT | + |
|
Preference number: 2 (lower is better) Translates to: PRIVQYRPKLNPLIHTWPQAYPP*EGTSST Trigger: AGTGGATGATGTTCCCTCTCAAGGTGGATAAGCTTG...GGGCCAAGTGTGGATCAATGGGTTTAACTTGGGCCGGTACTGGACAATGCGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
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| 3UTR-3UTR GCA 90 bp | GATTACAACAAGGCTCGGGTGAGCTGGAAAAGGAGCTACAGAGCGGAGGGCATCCTTTTGTTCAGACGCTaGTGGAGTTGTGGAGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: DYNKARVSWKRSYRAEGILLFRR*WSCGVS Trigger: GGACACTCCACAACTCCAGCAGCGTCTGAACAAAAG...GATGCCCTCCGCTCTGTAGCTCCTTTTCCAGCTCACCCGAGCCTTGTTGTAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
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| 3UTR-3UTR CCA 90 bp | AGCTTATCCACCTTGAGAGGGAACATCATCCACTCAGTGAGGATGGTCTGCCCCGAATGGATTGGGCCTTaGGGGCAGAGAAAGTCTAGG | + |
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Preference number: 2 (lower is better) Translates to: SLSTLRGNIIHSVRMVCPEWIGP*GQRKSR Trigger: CCTAGACTTTCTCTGCCCCCAAGGCCCAATCCATTC...GGGGCAGACCATCCTCACTGAGTGGATGATGTTCCCTCTCAAGGTGGATAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
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| 3UTR-3UTR CCA 90 bp | CCCCGCATTGTCCAGTACCGGCCCAAGTTAAACCCATTGATCCACACTTGGCCCCCCTTGAAGTCACTGTaGTTAGACCCAAAACTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: PRIVQYRPKLNPLIHTWPPLKSL*LDPKLS Trigger: GCTCAGTTTTGGGTCTAACCACAGTGACTTCAAGGG...GGGCCAAGTGTGGATCAATGGGTTTAACTTGGGCCGGTACTGGACAATGCGGGG 53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
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| 3UTR-3UTR GCA 90 bp | TCCCTTTCACTACCTCGACTTCTCTTTCTGCTCCACACGTTGCCTTCGAGACCAGCCATCACCAAAGGATaGTGCCCTGTGTCTCAGACT | + |
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Preference number: 2 (lower is better) Translates to: SLSLPRLLFLLHTLPSRPAITKG*CPVSQT Trigger: AGTCTGAGACACAGGGCAGCATCCTTTGGTGATGGC...TGGTCTCGAAGGCAACGTGTGGAGCAGAAAGAGAAGTCGAGGTAGTGAAAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
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| 3UTR-3UTR GCA 90 bp | CCCCGCATTGTCCAGTACCGGCCCAAGTTAAACCCATTGATCCACACTTGGCCCGAAAACTGGAAACTTTaGGGAATAGAAGGCAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: PRIVQYRPKLNPLIHTWPENWKL*GIEGRD Trigger: GTCCCTGCCTTCTATTCCGCAAAGTTTCCAGTTTTC...GGGCCAAGTGTGGATCAATGGGTTTAACTTGGGCCGGTACTGGACAATGCGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
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| 3UTR CAA 90 bp | GGCTGTCCAATCATTTTCCTTCCTTTTGTTCAGACGCTGCTGGAGTaGTGGAGTGTCCCTCCAAGGCCTCATTCCCTTTCACTACCTCGA | + |
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Preference number: 2 (lower is better) Translates to: GCPIIFLPFVQTLLE*WSVPPRPHSLSLPR Trigger: TCGAGGTAGTGAAAGGGAATGAGGCCTTGGAGGGACACTCCACAACTCCAGCAGCGTCTGAACAAAAGGAAGGAAAATGATTGGACAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTTGTTCAGACGCTGCTGGAGTTGTGGAGTGTCCCTCCAAGGCCTCATTCCCCTCTCTTCCTCCTCATaGAGCTTGACATTTGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: LLFRRCWSCGVSLQGLIPLSSSS*SLTFGR Trigger: TCTTCCAAATGTCAAGCTTCATGAGGAGGAAGAGAG...GGGAATGAGGCCTTGGAGGGACACTCCACAACTCCAGCAGCGTCTGAACAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
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| 3UTR CAA 90 bp | AGCAAATTCCCATCCAGGCTCATAGTCAAAGGTCCAAACTTCATCTaGGGGCTGGGAGGAGGTAAAGGTCCCAAGGGAATTTCCTGGAAC | + |
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Preference number: 2 (lower is better) Translates to: SKFPSRLIVKGPNFI*GLGGGKGPKGISWN Trigger: GTTCCAGGAAATTCCCTTGGGACCTTTACCTCCTCCCAGCCCCAAGATGAAGTTTGGACCTTTGACTATGAGCCTGGATGGGAATTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
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| 3UTR-3UTR CCA 90 bp | GCACCCAGAATGGTGTTGGTTCTAAAACAGGAGAAGTCAGATAGGTCCTGTACAGTCCAAACTTCATCTTaGGGCTGGGAGGAGGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: APRMVLVLKQEKSDRSCTVQTSS*GWEEVK Trigger: CTTTACCTCCTCCCAGCCCCAAGATGAAGTTTGGAC...TGTACAGGACCTATCTGACTTCTCCTGTTTTAGAACCAACACCATTCTGGGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
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| 3UTR-3UTR TCA 90 bp | AATGTGATTTTGTTGATTGATCTACCAAACAGCAGCAGTCTTGGCACGTATAGGGGGACAGAGGAAGCTTaGGGCAGGGCTCTTTTCATC | + |
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Preference number: 2 (lower is better) Translates to: NVILLIDLPNSSSLGTYRGTEEA*GRALFI Trigger: GATGAAAAGAGCCCTGCCTCAAGCTTCCTCTGTCCC...CCTATACGTGCCAAGACTGCTGCTGTTTGGTAGATCAATCAACAAAATCACATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
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| 3UTR CAA 90 bp | ATACCCCGTCTACCATCACATAGGCTCGGTCATGAATCCCATTATTaGGCACCCAGAATGGTGTTGGTTCTAAAACAGGAGAAGTCAGAT | + |
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Preference number: 2 (lower is better) Translates to: IPRLPSHRLGHESHY*APRMVLVLKQEKSD Trigger: ATCTGACTTCTCCTGTTTTAGAACCAACACCATTCTGGGTGCCAAATAATGGGATTCATGACCGAGCCTATGTGATGGTAGACGGGGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
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| 3UTR-3UTR GCA 90 bp | ATAAAGTTTGGCAAGAAAACTGTGTGTGTACTTACAGTCAGAGGGATTGTAGCCGCCATCACCAAAGGATaGTGCCCTGTGTCTCAGACT | + |
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Preference number: 2 (lower is better) Translates to: IKFGKKTVCVLTVRGIVAAITKG*CPVSQT Trigger: AGTCTGAGACACAGGGCAGCATCCTTTGGTGATGGC...GGCTACAATCCCTCTGACTGTAAGTACACACACAGTTTTCTTGCCAAACTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAGAAAGTCTAGGAAAGACAGCAAATTCCCATCCAGGCTCATAGTCAAAGGTTGCTTCAGATATGGGTaGATCATAGTCGTAGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: QRKSRKDSKFPSRLIVKGCFRYG*IIVVAG Trigger: ACCAGCTACGACTATGATGCACCCATATCTGAAGCA...ACCTTTGACTATGAGCCTGGATGGGAATTTGCTGTCTTTCCTAGACTTTCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
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| 3UTR-3UTR CCA 90 bp | TCTGAGAGAAGAAAGTTATACCCCCAATGCAAAGTGCTATTGAGGATAGGCTTACCCCTGCTTCAGATATaGGTGCATCATAGTCGTAGC | + |
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Preference number: 2 (lower is better) Translates to: SERRKLYPQCKVLLRIGLPLLQI*VHHSRS Trigger: GCTACGACTATGATGCACCCATATCTGAAGCAGGGG...TAAGCCTATCCTCAATAGCACTTTGCATTGGGGGTATAACTTTCTTCTCTCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
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| 3UTR-3UTR CCA 90 bp | CAGAGAAAGTCTAGGAAAGACAGCAAATTCCCATCCAGGCTCATAGTCAAAGGTAAGTTGGTACCTCCATaGAACATATACATGTTCACA | + |
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Preference number: 2 (lower is better) Translates to: QRKSRKDSKFPSRLIVKGKLVPP*NIYMFT Trigger: TGTGAACATGTATATGTTCCATGGAGGTACCAACTT...ACCTTTGACTATGAGCCTGGATGGGAATTTGCTGTCTTTCCTAGACTTTCTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
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| 3UTR TCA 72 bp | CGAGACCATCGCAGTCAGGCGGGGAGACCTTCATCTTaGTTTCTTTCAGCACCTGGGCCAACTCTGGGTCCC | + |
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Preference number: 3 (lower is better) Translates to: RDHRSQAGRPSS*FLSAPGPTLGP Trigger: GGGACCCAGAGTTGGCCCAGGTGCTGAAAGAAATCAAGATGAAGGTCTCCCCGCCTGACTGCGATGGTCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
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| 3UTR GCA 72 bp | TTTCACTACCTCGACTTCTCTTTCTGCTCCACACGTTaGCTTCGAGACCATCGCAGTCAGGCGGGGAGACCT | + |
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Preference number: 3 (lower is better) Translates to: FHYLDFSFCSTR*LRDHRSQAGRP Trigger: AGGTCTCCCCGCCTGACTGCGATGGTCTCGAAGGCAACGTGTGGAGCAGAAAGAGAAGTCGAGGTAGTGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
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| 3UTR CCA 72 bp | GGCGGGGAGACCTTCATCTTGATTTCTTTCAGCACCTaGGCCAACTCTGGGTCCCAAGAGGACACATCCAGA | + |
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Preference number: 3 (lower is better) Translates to: GGETFILISFST*ANSGSQEDTSR Trigger: TCTGGATGTGTCCTCTTGGGACCCAGAGTTGGCCCAGGTGCTGAAAGAAATCAAGATGAAGGTCTCCCCGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
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| 3UTR-3UTR CAA 90 bp | CCCCGCATTGTCCAGTACCGGCCCAAGTTAAACCCATTGATCCACACTTGGCCCGCTTCTAACAGGCCCTaGAAGTCACTGTGGTTAGAC | + |
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Preference number: 3 (lower is better) Translates to: PRIVQYRPKLNPLIHTWPASNRP*KSLWLD Trigger: GTCTAACCACAGTGACTTCAAGGGCCTGTTAGAAGC...GGGCCAAGTGTGGATCAATGGGTTTAACTTGGGCCGGTACTGGACAATGCGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
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| 3UTR GCA 72 bp | GGCCTCATTCCCTTTCACTACCTCGACTTCTCTTTCTaGTCCACACGTTGCCTTCGAGACCATCGCAGTCAG | + |
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Preference number: 3 (lower is better) Translates to: GLIPFHYLDFSF*STRCLRDHRSQ Trigger: CTGACTGCGATGGTCTCGAAGGCAACGTGTGGAGCAGAAAGAGAAGTCGAGGTAGTGAAAGGGAATGAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
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| 3UTR GCA 72 bp | TTGAGAGGGAACATCATCCACTCAGTGAGGATGGTCTaGCCCAGCAGTGGTGCTTCTAACAGGCCCTTGAAG | + |
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Preference number: 3 (lower is better) Translates to: LRGNIIHSVRMV*PSSGASNRPLK Trigger: CTTCAAGGGCCTGTTAGAAGCACCACTGCTGGGGCAGACCATCCTCACTGAGTGGATGATGTTCCCTCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
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| 3UTR-3UTR CAA 90 bp | AGCTTATCCACCTTGAGAGGGAACATCATCCACTCAGTGAGGATGGTCTGCCCCGGTCCAAACTTCATCTaGGGGCTGGGAGGAGGTAAA | + |
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Preference number: 3 (lower is better) Translates to: SLSTLRGNIIHSVRMVCPGPNFI*GLGGGK Trigger: TTTACCTCCTCCCAGCCCCAAGATGAAGTTTGGACC...GGGGCAGACCATCCTCACTGAGTGGATGATGTTCCCTCTCAAGGTGGATAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
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| 3UTR CCA 72 bp | GTCCAATCATTTTCCTTCCTTTTGTTCAGACGCTGCTaGAGTTGTGGAGTGTCCCTCCAAGGCCTCATTCCC | + |
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Preference number: 3 (lower is better) Translates to: VQSFSFLLFRRC*SCGVSLQGLIP Trigger: GGGAATGAGGCCTTGGAGGGACACTCCACAACTCCAGCAGCGTCTGAACAAAAGGAAGGAAAATGATTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
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| 3UTR CCA 72 bp | CTTGATGCCTATGATTACAACAAGGCTCGGGTGAGCTaGAAAAGGAGCTACAGAGCGGAGGGCATCAGAGAT | + |
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Preference number: 3 (lower is better) Translates to: LDAYDYNKARVS*KRSYRAEGIRD Trigger: ATCTCTGATGCCCTCCGCTCTGTAGCTCCTTTTCCAGCTCACCCGAGCCTTGTTGTAATCATAGGCATCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
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| 3UTR-3UTR CAA 90 bp | TGGGGGCAGAGAAAGTCTAGGAAAGACAGCAAATTCCCATCCAGGCTCATAGTCTCGTGTGGAATGATTTaGGCCCCAGTAATCCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: WGQRKSRKDSKFPSRLIVSCGMI*APVIQP Trigger: TGGCTGGATTACTGGGGCCAAAATCATTCCACACGA...GACTATGAGCCTGGATGGGAATTTGCTGTCTTTCCTAGACTTTCTCTGCCCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
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| 3UTR TCA 72 bp | AGGACACATCCAGACCTAGAGCTCTCTTCCTCCTCATaGAGCTTGACATTTGGAAGATGGGTGGTGAAGGAC | + |
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Preference number: 3 (lower is better) Translates to: RTHPDLELSSSS*SLTFGRWVVKD Trigger: GTCCTTCACCACCCATCTTCCAAATGTCAAGCTTCATGAGGAGGAAGAGAGCTCTAGGTCTGGATGTGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
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| 3UTR TCA 72 bp | AGAATCTTGATGCCTATGATTACAACAAGGCTCGGGTaGGCTGGAAAAGGAGCTACAGAGCGGAGGGCATCA | + |
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Preference number: 3 (lower is better) Translates to: RILMPMITTRLG*AGKGATERRAS Trigger: TGATGCCCTCCGCTCTGTAGCTCCTTTTCCAGCTCACCCGAGCCTTGTTGTAATCATAGGCATCAAGATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
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| 3UTR GCA 72 bp | GCTGTCCAATCATTTTCCTTCCTTTTGTTCAGACGCTaGTGGAGTTGTGGAGTGTCCCTCCAAGGCCTCATT | + |
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Preference number: 3 (lower is better) Translates to: AVQSFSFLLFRR*WSCGVSLQGLI Trigger: AATGAGGCCTTGGAGGGACACTCCACAACTCCAGCAGCGTCTGAACAAAAGGAAGGAAAATGATTGGACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
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| 3UTR CCA 72 bp | ATTTTCCTTCCTTTTGTTCAGACGCTGCTGGAGTTGTaGAGTGTCCCTCCAAGGCCTCATTCCCTTTCACTA | + |
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Preference number: 3 (lower is better) Translates to: IFLPFVQTLLEL*SVPPRPHSLSL Trigger: TAGTGAAAGGGAATGAGGCCTTGGAGGGACACTCCACAACTCCAGCAGCGTCTGAACAAAAGGAAGGAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
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| 3UTR CCA 72 bp | AGATATGGGTGCATCATAGTCGTAGCTGGTAGTAATTaGAAGGAAGCGTCCCTTCTCGTCAGCTCCATTCCA | + |
|
Preference number: 3 (lower is better) Translates to: RYGCIIVVAGSN*KEASLLVSSIP Trigger: TGGAATGGAGCTGACGAGAAGGGACGCTTCCTTCCAATTACTACCAGCTACGACTATGATGCACCCATATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
||
| 3UTR GCA 72 bp | ATTTCGAATTGCAAAAAGCTTAGGTGTAGGGTCCCCTaGTTCAGATATGGGTGCATCATAGTCGTAGCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: ISNCKKLRCRVP*FRYGCIIVVAG Trigger: ACCAGCTACGACTATGATGCACCCATATCTGAAGCAGGGGACCCTACACCTAAGCTTTTTGCAATTCGAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
||
| 3UTR CCA 72 bp | AGTTTAACAGCCTCAAAGGTCAATGGCAAAACTGAATaGATTGGGCCTTGGGGGCAGAGAAAGTCTAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SLTASKVNGKTE*IGPWGQRKSRK Trigger: TTTCCTAGACTTTCTCTGCCCCCAAGGCCCAATCCATTCAGTTTTGCCATTGACCTTTGAGGCTGTTAAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
||
| 3UTR-3UTR CAA 90 bp | AATGTGATTTTGTTGATTGATCTACCAAACAGCAGCAGTCTTGGCACGTATAGGGCACCCAGAATGGTGTaGGTTCTAAAACAGGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: NVILLIDLPNSSSLGTYRAPRMV*VLKQEK Trigger: CTTCTCCTGTTTTAGAACCAACACCATTCTGGGTGC...CCTATACGTGCCAAGACTGCTGCTGTTTGGTAGATCAATCAACAAAATCACATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
||
| 3UTR CCA 72 bp | CTGACAAATCAACGCGTAATGAATTCCGGAGGTTCATaGAGAAGAATCTTGATGCCTATGATTACAACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LTNQRVMNSGGS*RRILMPMITTR Trigger: CCTTGTTGTAATCATAGGCATCAAGATTCTTCTCCATGAACCTCCGGAATTCATTACGCGTTGATTTGTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGAGAGAAGAAAGTTATACCCCCAATGCAAAGTGCTATTGAGGATAGGCTTAGGAATTTCCTGGAACTaGCTGATGACATTTCGAATT | + |
|
Preference number: 3 (lower is better) Translates to: SERRKLYPQCKVLLRIGLGISWN*LMTFRI Trigger: AATTCGAAATGTCATCAGCAAGTTCCAGGAAATTCC...TAAGCCTATCCTCAATAGCACTTTGCATTGGGGGTATAACTTTCTTCTCTCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
||
| 3UTR GCA 72 bp | CCTTGTGTTTCTGAGAGAAGAAAGTTATACCCCCAATaGAAAGTGCTATTGAGGATAGGCTTATCCAAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: PCVSERRKLYPQ*KVLLRIGLSKN Trigger: GTTTTTGGATAAGCCTATCCTCAATAGCACTTTGCATTGGGGGTATAACTTTCTTCTCTCAGAAACACAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
||
| CDS-3UTR TCA 90 bp | TGGAAGATGGGTGGTGAAGGACACCCAGGAATCGAGGCAAAGACAGGGCCACGACCACATCTGAGTCCGTaGGGCCCATCTGTGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WKMGGEGHPGIEAKTGPRPHLSP*GPSVVK Trigger: CTTCACCACAGATGGGCCTCACGGACTCAGATGTGG...TCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTCACCACCCATCTTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
||
| CDS-3UTR TCA 90 bp | TCACTGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGACTCCAGGGTCATGAAGGGAGCCACATCTaGGTCCGTGAGGCCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLWPSPKDAALCLRLQGHEGSHI*VREAHL Trigger: CAGATGGGCCTCACGGACTCAGATGTGGCTCCCTTC...ATGACCCTGGAGTCTGAGACACAGGGCAGCATCCTTTGGTGATGGCCACAGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR TCA 90 bp | GCCTTCTTTATGGTCACTGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGCGCTCAACTGCATCTTaGGAAGCCGGTCGGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: AFFMVTVAITKGCCPVSQRSTAS*EAGRPT Trigger: TGTGGGCCGACCGGCTTCTCAAGATGCAGTTGAGCG...CTGAGACACAGGGCAGCATCCTTTGGTGATGGCCACAGTGACCATAAAGAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR TCA 90 bp | TTTGTTCAGACGCTGCTGGAGTTGTGGAGTGTCCCTCCAAGGCCTCATTCCCTTCGCTCAACTGCATCTTaGGAAGCCGGTCGGCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: FVQTLLELWSVPPRPHSLRSTAS*EAGRPT Trigger: TGTGGGCCGACCGGCTTCTCAAGATGCAGTTGAGCG...AAGGGAATGAGGCCTTGGAGGGACACTCCACAACTCCAGCAGCGTCTGAACAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
||
| 3UTR CAA 72 bp | TCGAGACCATCGCAGTCAGGCGGGGAGACCTTCATCTaGATTTCTTTCAGCACCTGGGCCAACTCTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRPSQSGGETFI*ISFSTWANSGS Trigger: GGACCCAGAGTTGGCCCAGGTGCTGAAAGAAATCAAGATGAAGGTCTCCCCGCCTGACTGCGATGGTCTCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
||
| 3UTR CAA 72 bp | CTTTCACTACCTCGACTTCTCTTTCTGCTCCACACGTaGCCTTCGAGACCATCGCAGTCAGGCGGGGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: LSLPRLLFLLHT*PSRPSQSGGET Trigger: GGTCTCCCCGCCTGACTGCGATGGTCTCGAAGGCAACGTGTGGAGCAGAAAGAGAAGTCGAGGTAGTGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
||
| CDS-3UTR TCA 90 bp | CTGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGACTCCAGGGTCATCTTACATCATCCACTCAGTaGGGATGGTCTGCCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LWPSPKDAALCLRLQGHLTSSTQ*GWSAPA Trigger: TGCTGGGGCAGACCATCCTCACTGAGTGGATGATGT...AAGATGACCCTGGAGTCTGAGACACAGGGCAGCATCCTTTGGTGATGGCCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| 3UTR CAA 72 bp | GAGGCCCGGCAGGCTGTCCAATCATTTTCCTTCCTTTaGTTCAGACGCTGCTGGAGTTGTGGAGTGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EARQAVQSFSFL*FRRCWSCGVSL Trigger: GAGGGACACTCCACAACTCCAGCAGCGTCTGAACAAAAGGAAGGAAAATGATTGGACAGCCTGCCGGGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
||
| 3UTR CAA 72 bp | CCCCGCATTGTCCAGTACCGGCCCAAGTTAAACCCATaGATCCACACTTGGCCCTTGGTCCATCCAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PRIVQYRPKLNP*IHTWPLVHPGR Trigger: TCTACCTGGATGGACCAAGGGCCAAGTGTGGATCAATGGGTTTAACTTGGGCCGGTACTGGACAATGCGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
||
| CDS-3UTR TCA 90 bp | TTTATGGTCACTGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGACTCCACCACATCTGAGTCCGTaGGGCCCATCTGTGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FMVTVAITKGCCPVSQTPPHLSP*GPSVVK Trigger: CTTCACCACAGATGGGCCTCACGGACTCAGATGTGG...TGGAGTCTGAGACACAGGGCAGCATCCTTTGGTGATGGCCACAGTGACCATAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR TCA 90 bp | ATTCCCTTTCACTACCTCGACTTCTCTTTCTGCTCCACACGTTGCCTTCGAGACGAAGGGAGCCACATCTaGGTCCGTGAGGCCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: IPFHYLDFSFCSTRCLRDEGSHI*VREAHL Trigger: CAGATGGGCCTCACGGACTCAGATGTGGCTCCCTTC...GTCTCGAAGGCAACGTGTGGAGCAGAAAGAGAAGTCGAGGTAGTGAAAGGGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
||
| CDS-3UTR TCA 90 bp | TTATGGTCACTGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGACTCCAGGGGACAGAGGAAGCTTaGGGCAGGGCTCTTTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LWSLWPSPKDAALCLRLQGTEEA*GRALFI Trigger: GATGAAAAGAGCCCTGCCTCAAGCTTCCTCTGTCCC...CTGGAGTCTGAGACACAGGGCAGCATCCTTTGGTGATGGCCACAGTGACCATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR GCA 90 bp | TTATGGTCACTGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGACTCCAGTCAGTGAGGATGGTCTaGCCCAGCAGTGGTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LWSLWPSPKDAALCLRLQSVRMV*PSSGAS Trigger: AGAAGCACCACTGCTGGGGCAGACCATCCTCACTGA...CTGGAGTCTGAGACACAGGGCAGCATCCTTTGGTGATGGCCACAGTGACCATAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR CCA 90 bp | CAACAAGGCTCGGGTGAGCTGGAAAAGGAGCTACAGAGCGGAGGGCATCAGAGAATAGATCCCAGGCTCTaGCTCATGGTAGTTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QQGSGELEKELQSGGHQRIDPRL*LMVVPR Trigger: CCTTGGAACTACCATGAGCCAGAGCCTGGGATCTAT...TCTCTGATGCCCTCCGCTCTGTAGCTCCTTTTCCAGCTCACCCGAGCCTTGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
||
| CDS-3UTR CCA 90 bp | TCACTGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGACTCCAGGGTCATGAATGGATTGGGCCTTaGGGGCAGAGAAAGTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLWPSPKDAALCLRLQGHEWIGP*GQRKSR Trigger: CCTAGACTTTCTCTGCCCCCAAGGCCCAATCCATTC...ATGACCCTGGAGTCTGAGACACAGGGCAGCATCCTTTGGTGATGGCCACAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR GCA 90 bp | TCACTGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGACTCCAGGGTCATGAAAGTAGTGCAGGCTaGCAGAAACATAGCGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLWPSPKDAALCLRLQGHESSAG*QKHSGR Trigger: CCTTCCGCTATGTTTCTGGCAGCCTGCACTACTTTC...ATGACCCTGGAGTCTGAGACACAGGGCAGCATCCTTTGGTGATGGCCACAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR CCA 90 bp | CTTTTGTTCAGACGCTGCTGGAGTTGTGGAGTGTCCCTCCAAGGCCTCATTCCCCCCCTGCTTCAGATATaGGTGCATCATAGTCGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLFRRCWSCGVSLQGLIPPLLQI*VHHSRS Trigger: GCTACGACTATGATGCACCCATATCTGAAGCAGGGG...GGGAATGAGGCCTTGGAGGGACACTCCACAACTCCAGCAGCGTCTGAACAAAAG 53% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTTATGGTCACTGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGACTGAGGCCCATCTGTGGTaGAGAGCAAGATCTTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FFMVTVAITKGCCPVSQTEAHLW*RARSCP Trigger: GGGACAAGATCTTGCTCTTCACCACAGATGGGCCTC...AGTCTGAGACACAGGGCAGCATCCTTTGGTGATGGCCACAGTGACCATAAAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGGAGTTGTGGAGTGTCCCTCCAAGGCCTCATTCCCTTTCACTACCTCGACCAAGCTTATCCACCTTaGGAGGGAACATCATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: CWSCGVSLQGLIPFHYLDQAYPP*EGTSST Trigger: AGTGGATGATGTTCCCTCTCAAGGTGGATAAGCTTG...GTCGAGGTAGTGAAAGGGAATGAGGCCTTGGAGGGACACTCCACAACTCCAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
||
| CDS-3UTR TCA 90 bp | CTTCCAGGTGCCAGGGCCATTGACTCAAGAAATGGAGGCCCGGCAGGCTGTCCATGTGATTTTGTTGATTaGTCTACCAAACAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPGARAIDSRNGGPAGCPCDFVD*STKQQQ Trigger: CTGCTGCTGTTTGGTAGATCAATCAACAAAATCACA...TGGACAGCCTGCCGGGCCTCCATTTCTTGAGTCAATGGCCCTGGCACCTGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGACTCCAGGGTCATCTTGTAGCTGGTAGTAATTaGAAGGAAGCGTCCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LWPSPKDAALCLRLQGHLVAGSN*KEASLL Trigger: GAGAAGGGACGCTTCCTTCCAATTACTACCAGCTAC...AAGATGACCCTGGAGTCTGAGACACAGGGCAGCATCCTTTGGTGATGGCCACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR CCA 90 bp | TGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGACTCCAGGGTCATCTTTCTCCCCTGCTTCAGATATaGGTGCATCATAGTCGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: WPSPKDAALCLRLQGHLSPLLQI*VHHSRS Trigger: GCTACGACTATGATGCACCCATATCTGAAGCAGGGG...AGAAAGATGACCCTGGAGTCTGAGACACAGGGCAGCATCCTTTGGTGATGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGACTCCAGGGTCATCTTTGTCCAAACTTCATCTTaGGGCTGGGAGGAGGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CGHHQRMLPCVSDSRVIFVQTSS*GWEEVK Trigger: CTTTACCTCCTCCCAGCCCCAAGATGAAGTTTGGAC...AAAGATGACCCTGGAGTCTGAGACACAGGGCAGCATCCTTTGGTGATGGCCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGACTCCAGGGTCATCTTTTCCACACTTGGCCCTTaGTCCATCCAGGTAGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: CGHHQRMLPCVSDSRVIFSTLGP*SIQVDR Trigger: TCTATCTACCTGGATGGACCAAGGGCCAAGTGTGGA...AAAGATGACCCTGGAGTCTGAGACACAGGGCAGCATCCTTTGGTGATGGCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR TCA 90 bp | AGTCAGAGGGATTGTAGCCTTCTTTATGGTCACTGTGGCCATCACCAAAGGATGGAGGCCCATCTGTGGTaGAGAGCAAGATCTTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SQRDCSLLYGHCGHHQRMEAHLW*RARSCP Trigger: GGGACAAGATCTTGCTCTTCACCACAGATGGGCCTC...CATCCTTTGGTGATGGCCACAGTGACCATAAAGAAGGCTACAATCCCTCTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR TCA 90 bp | GATTGTAGCCTTCTTTATGGTCACTGTGGCCATCACCAAAGGATGCTGCCCTGTTTCACCAATGGCCCATaGGGTTCATACTCCCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DCSLLYGHCGHHQRMLPCFTNGP*GSYSRS Trigger: GCTTCGGGAGTATGAACCTCATGGGCCATTGGTGAA...ACAGGGCAGCATCCTTTGGTGATGGCCACAGTGACCATAAAGAAGGCTACAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR TCA 90 bp | CGGCCACCTTATACTGTAGCAGCTGACAAATCAACGCGTAATGAATTCCGGAGGTTCACCAATGGCCCATaGGGTTCATACTCCCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RPPYTVAADKSTRNEFRRFTNGP*GSYSRS Trigger: GCTTCGGGAGTATGAACCTCATGGGCCATTGGTGAA...CCTCCGGAATTCATTACGCGTTGATTTGTCAGCTGCTACAGTATAAGGTGGCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
||
| CDS-3UTR CCA 90 bp | CGGCCACCTTATACTGTAGCAGCTGACAAATCAACGCGTAATGAATTCCGGAGGGAATGGATTGGGCCTTaGGGGCAGAGAAAGTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: RPPYTVAADKSTRNEFRREWIGP*GQRKSR Trigger: CCTAGACTTTCTCTGCCCCCAAGGCCCAATCCATTC...CCTCCGGAATTCATTACGCGTTGATTTGTCAGCTGCTACAGTATAAGGTGGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
||
| CDS-3UTR CCA 90 bp | AGCCTTCTTTATGGTCACTGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGCAATATATCCAGCCTaGTCCCTACTGTCCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLLYGHCGHHQRMLPCVSAIYPA*SLLSQS Trigger: TGACTGGGACAGTAGGGACCAGGCTGGATATATTGC...TGAGACACAGGGCAGCATCCTTTGGTGATGGCCACAGTGACCATAAAGAAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR CCA 90 bp | TTATGGTCACTGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGACTCCAGCCCTTGAAGTCACTGTaGTTAGACCCAAAACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LWSLWPSPKDAALCLRLQPLKSL*LDPKLS Trigger: GCTCAGTTTTGGGTCTAACCACAGTGACTTCAAGGG...CTGGAGTCTGAGACACAGGGCAGCATCCTTTGGTGATGGCCACAGTGACCATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| 3UTR CAA 72 bp | TTGGGCTACAGCTGGACTGGATCGTGTGGAATGATTTaGGCCCCAGTAATCCAGCCAGCCTGTATAGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: LGYSWTGSCGMI*APVIQPACIVL Trigger: GAGTACTATACAGGCTGGCTGGATTACTGGGGCCAAAATCATTCCACACGATCCAGTCCAGCTGTAGCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
||
| CDS-3UTR TCA 90 bp | TCACTGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGACTCCAGGGTCATGGAACCTTGTGTTTCTaGGAGAAGAAAGTTATACCC | + |
|
Preference number: 4 (lower is better) Translates to: SLWPSPKDAALCLRLQGHGTLCF*EKKVIP Trigger: GGGTATAACTTTCTTCTCTCAGAAACACAAGGTTCC...ATGACCCTGGAGTCTGAGACACAGGGCAGCATCCTTTGGTGATGGCCACAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR GCA 90 bp | AGAAATGGAGGCCCGGCAGGCTGTCCAATCATTTTCCTTCCTTTTGTTCAGACGGAAAGTAGTGCAGGCTaGCAGAAACATAGCGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RNGGPAGCPIIFLPFVQTESSAG*QKHSGR Trigger: CCTTCCGCTATGTTTCTGGCAGCCTGCACTACTTTC...CGTCTGAACAAAAGGAAGGAAAATGATTGGACAGCCTGCCGGGCCTCCATTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGCTGTCCAATCATTTTCCTTCCTTTTGTTCAGACGCTGCTGGAGTTGTGGTCCAAACTTCATCTTaGGGCTGGGAGGAGGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GRLSNHFPSFCSDAAGVVVQTSS*GWEEVK Trigger: CTTTACCTCCTCCCAGCCCCAAGATGAAGTTTGGAC...CACAACTCCAGCAGCGTCTGAACAAAAGGAAGGAAAATGATTGGACAGCCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
||
| CDS-3UTR TCA 90 bp | TTTATGGTCACTGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGACTCCATATTCGTTCTCCACCTaGATGCTAATGATGTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FMVTVAITKGCCPVSQTPYSFST*MLMMLP Trigger: GGGCAACATCATTAGCATTCAGGTGGAGAACGAATA...TGGAGTCTGAGACACAGGGCAGCATCCTTTGGTGATGGCCACAGTGACCATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR TCA 90 bp | CTGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGACTCCAGGGTCATCTTTGTGATTTTGTTGATTaGTCTACCAAACAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LWPSPKDAALCLRLQGHLCDFVD*STKQQQ Trigger: CTGCTGCTGTTTGGTAGATCAATCAACAAAATCACA...AAGATGACCCTGGAGTCTGAGACACAGGGCAGCATCCTTTGGTGATGGCCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR GCA 90 bp | TTTATGGTCACTGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGACTCCATGCTTCAGATATGGGTaGATCATAGTCGTAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FMVTVAITKGCCPVSQTPCFRYG*IIVVAG Trigger: ACCAGCTACGACTATGATGCACCCATATCTGAAGCA...TGGAGTCTGAGACACAGGGCAGCATCCTTTGGTGATGGCCACAGTGACCATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGACTCCAGGGTCATCTTTACAGATGTAAGGTCCTaGTCTCAGAATAACCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: CGHHQRMLPCVSDSRVIFTDVRS*SQNNQQ Trigger: CTGTTGGTTATTCTGAGACCAGGACCTTACATCTGT...AAAGATGACCCTGGAGTCTGAGACACAGGGCAGCATCCTTTGGTGATGGCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| 3UTR CAA 72 bp | ATCATTTTCCTTCCTTTTGTTCAGACGCTGCTGGAGTaGTGGAGTGTCCCTCCAAGGCCTCATTCCCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IIFLPFVQTLLE*WSVPPRPHSLS Trigger: TGAAAGGGAATGAGGCCTTGGAGGGACACTCCACAACTCCAGCAGCGTCTGAACAAAAGGAAGGAAAATGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
||
| CDS-3UTR TCA 90 bp | AGCCTTCTTTATGGTCACTGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTCATCTGAGGTTCTCAGATaGATATTAGGGTTTCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLLYGHCGHHQRMLPCVSSEVLR*ILGFRS Trigger: GCTTCGAAACCCTAATATTCATCTGAGAACCTCAGA...TGAGACACAGGGCAGCATCCTTTGGTGATGGCCACAGTGACCATAAAGAAGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR TCA 90 bp | GATTGTAGCCTTCTTTATGGTCACTGTGGCCATCACCAAAGGATGCTGCCCTGTTATTCGTTCTCCACCTaGATGCTAATGATGTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DCSLLYGHCGHHQRMLPCYSFST*MLMMLP Trigger: GGGCAACATCATTAGCATTCAGGTGGAGAACGAATA...ACAGGGCAGCATCCTTTGGTGATGGCCACAGTGACCATAAAGAAGGCTACAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR GCA 90 bp | GATTGTAGCCTTCTTTATGGTCACTGTGGCCATCACCAAAGGATGCTGCCCTGTGAAAACTGGAAACTTTaGGGAATAGAAGGCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: DCSLLYGHCGHHQRMLPCENWKL*GIEGRD Trigger: GTCCCTGCCTTCTATTCCGCAAAGTTTCCAGTTTTC...ACAGGGCAGCATCCTTTGGTGATGGCCACAGTGACCATAAAGAAGGCTACAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGGATTGTAGCCTTCTTTATGGTCACTGTGGCCATCACCAAAGGATGCTGCTCTGAGGTTCTCAGATaGATATTAGGGTTTCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGIVAFFMVTVAITKGCCSEVLR*ILGFRS Trigger: GCTTCGAAACCCTAATATTCATCTGAGAACCTCAGA...GCAGCATCCTTTGGTGATGGCCACAGTGACCATAAAGAAGGCTACAATCCCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR TCA 90 bp | ATAAAGTTTGGCAAGAAAACTGTGTGTGTACTTACAGTCAGAGGGATTGTAGCCGGGACAGAGGAAGCTTaGGGCAGGGCTCTTTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: IKFGKKTVCVLTVRGIVAGTEEA*GRALFI Trigger: GATGAAAAGAGCCCTGCCTCAAGCTTCCTCTGTCCC...GGCTACAATCCCTCTGACTGTAAGTACACACACAGTTTTCTTGCCAAACTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR TCA 90 bp | GATTGTAGCCTTCTTTATGGTCACTGTGGCCATCACCAAAGGATGCTGCCCTGTGGAACCTTGTGTTTCTaGGAGAAGAAAGTTATACCC | + |
|
Preference number: 4 (lower is better) Translates to: DCSLLYGHCGHHQRMLPCGTLCF*EKKVIP Trigger: GGGTATAACTTTCTTCTCTCAGAAACACAAGGTTCC...ACAGGGCAGCATCCTTTGGTGATGGCCACAGTGACCATAAAGAAGGCTACAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR GCA 90 bp | AATCATTTTCCTTCCTTTTGTTCAGACGCTGCTGGAGTTGTGGAGTGTCCCTCCTGCTTCAGATATGGGTaGATCATAGTCGTAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NHFPSFCSDAAGVVECPSCFRYG*IIVVAG Trigger: ACCAGCTACGACTATGATGCACCCATATCTGAAGCA...GGAGGGACACTCCACAACTCCAGCAGCGTCTGAACAAAAGGAAGGAAAATGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
||
| CDS-3UTR CCA 90 bp | ATTCCCTTTCACTACCTCGACTTCTCTTTCTGCTCCACACGTTGCCTTCGAGACACAGATGTAAGGTCCTaGTCTCAGAATAACCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: IPFHYLDFSFCSTRCLRDTDVRS*SQNNQQ Trigger: CTGTTGGTTATTCTGAGACCAGGACCTTACATCTGT...GTCTCGAAGGCAACGTGTGGAGCAGAAAGAGAAGTCGAGGTAGTGAAAGGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
||
| CDS-3UTR CCA 90 bp | CTTTTGTTCAGACGCTGCTGGAGTTGTGGAGTGTCCCTCCAAGGCCTCATTCCCATTGTGGTAGAGAAATaGATATATCTTTGGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLFRRCWSCGVSLQGLIPIVVEK*IYLWQQ Trigger: TTGCTGCCAAAGATATATCCATTTCTCTACCACAAT...GGGAATGAGGCCTTGGAGGGACACTCCACAACTCCAGCAGCGTCTGAACAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTTTCAGCACCTGGGCCAACTCTGGGTCCCAAGAGGACACATCCAGACCTAAAGTTGGTACCTCCATaGAACATATACATGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: FLSAPGPTLGPKRTHPDLKLVPP*NIYMFT Trigger: TGTGAACATGTATATGTTCCATGGAGGTACCAACTT...TAGGTCTGGATGTGTCCTCTTGGGACCCAGAGTTGGCCCAGGTGCTGAAAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
||
| CDS-3UTR TCA 90 bp | AATAAAGTTTGGCAAGAAAACTGTGTGTGTACTTACAGTCAGAGGGATTGTAGCTTGGCAGCAAGACCTTaGACCAGGAGTCCACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NKVWQENCVCTYSQRDCSLAARP*TRSPQL Trigger: AAGCTGTGGACTCCTGGTTCAAGGTCTTGCTGCCAA...GCTACAATCCCTCTGACTGTAAGTACACACACAGTTTTCTTGCCAAACTTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR CCA 90 bp | AGCCTTCTTTATGGTCACTGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAATTGTGGTAGAGAAATaGATATATCTTTGGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLLYGHCGHHQRMLPCVSIVVEK*IYLWQQ Trigger: TTGCTGCCAAAGATATATCCATTTCTCTACCACAAT...TGAGACACAGGGCAGCATCCTTTGGTGATGGCCACAGTGACCATAAAGAAGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR CCA 90 bp | GATTGTAGCCTTCTTTATGGTCACTGTGGCCATCACCAAAGGATGCTGCCCTGTAAGTTGGTACCTCCATaGAACATATACATGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: DCSLLYGHCGHHQRMLPCKLVPP*NIYMFT Trigger: TGTGAACATGTATATGTTCCATGGAGGTACCAACTT...ACAGGGCAGCATCCTTTGGTGATGGCCACAGTGACCATAAAGAAGGCTACAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAGTTTGGCAAGAAAACTGTGTGTGTACTTACAGTCAGAGGGATTGTAGCCGCAATATATCCAGCCTaGTCCCTACTGTCCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: IKFGKKTVCVLTVRGIVAAIYPA*SLLSQS Trigger: TGACTGGGACAGTAGGGACCAGGCTGGATATATTGC...GGCTACAATCCCTCTGACTGTAAGTACACACACAGTTTTCTTGCCAAACTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAGTTTGGCAAGAAAACTGTGTGTGTACTTACAGTCAGAGGGATTGTAGCCTCCACACTTGGCCCTTaGTCCATCCAGGTAGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: IKFGKKTVCVLTVRGIVASTLGP*SIQVDR Trigger: TCTATCTACCTGGATGGACCAAGGGCCAAGTGTGGA...GGCTACAATCCCTCTGACTGTAAGTACACACACAGTTTTCTTGCCAAACTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| 3UTR CAA 72 bp | GGTCATGAATCCCATTATTTGGCACCCAGAATGGTGTaGGTTCTAAAACAGGAGAAGTCAGATAGGTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GHESHYLAPRMV*VLKQEKSDRSC Trigger: ACAGGACCTATCTGACTTCTCCTGTTTTAGAACCAACACCATTCTGGGTGCCAAATAATGGGATTCATGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
||
| 3UTR CAA 72 bp | GAGAGAAGAAAGTTATACCCCCAATGCAAAGTGCTATaGAGGATAGGCTTATCCAAAAACTGGACTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ERRKLYPQCKVL*RIGLSKNWTWG Trigger: CCCCCAAGTCCAGTTTTTGGATAAGCCTATCCTCAATAGCACTTTGCATTGGGGGTATAACTTTCTTCTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000189663.7 |
||
| CDS-3UTR TCA 90 bp | TTAATCATAATAAAGTTTGGCAAGAAAACTGTGTGTGTACTTACAGTCAGAGGGACATCATCCACTCAGTaGGGATGGTCTGCCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LIIIKFGKKTVCVLTVRGTSSTQ*GWSAPA Trigger: TGCTGGGGCAGACCATCCTCACTGAGTGGATGATGT...CCCTCTGACTGTAAGTACACACACAGTTTTCTTGCCAAACTTTATTATGATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR GCA 90 bp | ATAAAGTTTGGCAAGAAAACTGTGTGTGTACTTACAGTCAGAGGGATTGTAGCCGAAAACTGGAAACTTTaGGGAATAGAAGGCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IKFGKKTVCVLTVRGIVAENWKL*GIEGRD Trigger: GTCCCTGCCTTCTATTCCGCAAAGTTTCCAGTTTTC...GGCTACAATCCCTCTGACTGTAAGTACACACACAGTTTTCTTGCCAAACTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR CCA 90 bp | AATAAAGTTTGGCAAGAAAACTGTGTGTGTACTTACAGTCAGAGGGATTGTAGCCCCTTGAAGTCACTGTaGTTAGACCCAAAACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NKVWQENCVCTYSQRDCSPLKSL*LDPKLS Trigger: GCTCAGTTTTGGGTCTAACCACAGTGACTTCAAGGG...GCTACAATCCCTCTGACTGTAAGTACACACACAGTTTTCTTGCCAAACTTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR CCA 90 bp | ATAATAAAGTTTGGCAAGAAAACTGTGTGTGTACTTACAGTCAGAGGGATTGTAATAGATCCCAGGCTCTaGCTCATGGTAGTTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IIKFGKKTVCVLTVRGIVIDPRL*LMVVPR Trigger: CCTTGGAACTACCATGAGCCAGAGCCTGGGATCTAT...TACAATCCCTCTGACTGTAAGTACACACACAGTTTTCTTGCCAAACTTTATTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR TCA 90 bp | ATAATAAAGTTTGGCAAGAAAACTGTGTGTGTACTTACAGTCAGAGGGATTGTACAAGCTTATCCACCTTaGGAGGGAACATCATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: IIKFGKKTVCVLTVRGIVQAYPP*EGTSST Trigger: AGTGGATGATGTTCCCTCTCAAGGTGGATAAGCTTG...TACAATCCCTCTGACTGTAAGTACACACACAGTTTTCTTGCCAAACTTTATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR CCA 90 bp | ATAATAAAGTTTGGCAAGAAAACTGTGTGTGTACTTACAGTCAGAGGGATTGTAGTAGCTGGTAGTAATTaGAAGGAAGCGTCCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IIKFGKKTVCVLTVRGIVVAGSN*KEASLL Trigger: GAGAAGGGACGCTTCCTTCCAATTACTACCAGCTAC...TACAATCCCTCTGACTGTAAGTACACACACAGTTTTCTTGCCAAACTTTATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR CCA 90 bp | ATAAAGTTTGGCAAGAAAACTGTGTGTGTACTTACAGTCAGAGGGATTGTAGCCAAATGGATATATCTTTaGCAGCAAGACCTTGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: IKFGKKTVCVLTVRGIVAKWIYL*QQDLEP Trigger: TGGTTCAAGGTCTTGCTGCCAAAGATATATCCATTT...GGCTACAATCCCTCTGACTGTAAGTACACACACAGTTTTCTTGCCAAACTTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS GCA 90 bp | GCCGGTCGGCCCACAGAACCGGCGGTACTCGAAAGTAGTGCAGGCTaGCAGAAACATAGCGGAAGGGGACCCCATCCAGGAGGAATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AGRPTEPAVLESSAG*QKHSGRGPHPGGIC Trigger: ACAGATTCCTCCTGGATGGGGTCCCCTTCCGCTATGTTTCTGGCAGCCTGCACTACTTTCGAGTACCGCCGGTTCTGTGGGCCGACCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 ENSMUST00000185448.2 ENSMUST00000186173.7 |
||
| CDS-3UTR CAA 90 bp | CTGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGACTCCAGGGTCATCTTCCGCTCAACTGCATCTaGAGAAGCCGGTCGGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LWPSPKDAALCLRLQGHLPLNCI*RSRSAH Trigger: GTGGGCCGACCGGCTTCTCAAGATGCAGTTGAGCGG...AAGATGACCCTGGAGTCTGAGACACAGGGCAGCATCCTTTGGTGATGGCCACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR CAA 90 bp | TGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGACTCCAGGGTCATCTTTCTCCGCTCAACTGCATCTaGAGAAGCCGGTCGGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: WPSPKDAALCLRLQGHLSPLNCI*RSRSAH Trigger: GTGGGCCGACCGGCTTCTCAAGATGCAGTTGAGCGG...AGAAAGATGACCCTGGAGTCTGAGACACAGGGCAGCATCCTTTGGTGATGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR CAA 90 bp | GCCTTCTTTATGGTCACTGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGGTTGTGGACCCCGCATaGTCCAGTACCGGCCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: AFFMVTVAITKGCCPVSQVVDPA*SSTGPS Trigger: ACTTGGGCCGGTACTGGACAATGCGGGGTCCACAAC...CTGAGACACAGGGCAGCATCCTTTGGTGATGGCCACAGTGACCATAAAGAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR CAA 90 bp | TGGAAGATGGGTGGTGAAGGACACCCAGGAATCGAGGCAAAGACAGGGCCACGAGGTCCAAACTTCATCTaGGGGCTGGGAGGAGGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: WKMGGEGHPGIEAKTGPRGPNFI*GLGGGK Trigger: TTTACCTCCTCCCAGCCCCAAGATGAAGTTTGGACC...TCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTCACCACCCATCTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
||
| CDS-3UTR CAA 90 bp | TCTTTCTGCTCCACACGTTGCCTTCGAGACCATCGCAGTCAGGCGGGGAGACCTGCTTCTAACAGGCCCTaGAAGTCACTGTGGTTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SFCSTRCLRDHRSQAGRPASNRP*KSLWLD Trigger: GTCTAACCACAGTGACTTCAAGGGCCTGTTAGAAGC...AGGTCTCCCCGCCTGACTGCGATGGTCTCGAAGGCAACGTGTGGAGCAGAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
||
| CDS-3UTR CAA 90 bp | TTTATGGTCACTGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGACTCCAGTTGTGGACCCCGCATaGTCCAGTACCGGCCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: FMVTVAITKGCCPVSQTPVVDPA*SSTGPS Trigger: ACTTGGGCCGGTACTGGACAATGCGGGGTCCACAAC...TGGAGTCTGAGACACAGGGCAGCATCCTTTGGTGATGGCCACAGTGACCATAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR CAA 90 bp | TTTCTGCTCCACACGTTGCCTTCGAGACCATCGCAGTCAGGCGGGGAGACCTTCGCACCCAGAATGGTGTaGGTTCTAAAACAGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FLLHTLPSRPSQSGGETFAPRMV*VLKQEK Trigger: CTTCTCCTGTTTTAGAACCAACACCATTCTGGGTGC...GAAGGTCTCCCCGCCTGACTGCGATGGTCTCGAAGGCAACGTGTGGAGCAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
||
| CDS-3UTR CAA 90 bp | GTGGTGAAGGACACCCAGGAATCGAGGCAAAGACAGGGCCACGAAGGTGTGTGGACAAGCTTATCCACCTaGAGAGGGAACATCATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VVKDTQESRQRQGHEGVWTSLST*RGNIIH Trigger: GTGGATGATGTTCCCTCTCAAGGTGGATAAGCTTGT...CCACACACCTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTCACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
||
| CDS-3UTR CAA 90 bp | CTGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGACTCCAGGGTCATCTTAGGGACAGAGGAAGCTaGAGGCAGGGCTCTTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LWPSPKDAALCLRLQGHLRDRGS*RQGSFH Trigger: ATGAAAAGAGCCCTGCCTCAAGCTTCCTCTGTCCCT...AAGATGACCCTGGAGTCTGAGACACAGGGCAGCATCCTTTGGTGATGGCCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR CAA 90 bp | TGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGACTCCAGGGTCATCTTTCTGGTCCAAACTTCATCTaGGGGCTGGGAGGAGGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: WPSPKDAALCLRLQGHLSGPNFI*GLGGGK Trigger: TTTACCTCCTCCCAGCCCCAAGATGAAGTTTGGACC...AGAAAGATGACCCTGGAGTCTGAGACACAGGGCAGCATCCTTTGGTGATGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR CAA 90 bp | TCACTGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGACTCCAGGGTCATCCCAAGTTAAACCCATaGATCCACACTTGGCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLWPSPKDAALCLRLQGHPKLNP*IHTWPL Trigger: CAAGGGCCAAGTGTGGATCAATGGGTTTAACTTGGG...ATGACCCTGGAGTCTGAGACACAGGGCAGCATCCTTTGGTGATGGCCACAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR CAA 90 bp | GCCTTCTTTATGGTCACTGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGGCTTCTAACAGGCCCTaGAAGTCACTGTGGTTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: AFFMVTVAITKGCCPVSQASNRP*KSLWLD Trigger: GTCTAACCACAGTGACTTCAAGGGCCTGTTAGAAGC...CTGAGACACAGGGCAGCATCCTTTGGTGATGGCCACAGTGACCATAAAGAAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS TCA 90 bp | CAGGAGTCCACAGCTTCAAGGAAGGCAGGATCTGAGGTTCTCAGATaGATATTAGGGTTTCGAAGCAACCAAGAGGGGAGACCTCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: QESTASRKAGSEVLR*ILGFRSNQEGRPPI Trigger: GATGGGAGGTCTCCCCTCTTGGTTGCTTCGAAACCCTAATATTCATCTGAGAACCTCAGATCCTGCCTTCCTTGAAGCTGTGGACTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 ENSMUST00000185448.2 |
||
| CDS CCA 90 bp | GGCAATGAGGTCCCGGCTGCCATTAAAGTTATAGATCCCAGGCTCTaGCTCATGGTAGTTCCAAGGCACATAAAACTGCACAGCGTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GNEVPAAIKVIDPRL*LMVVPRHIKLHSVE Trigger: CTCAACGCTGTGCAGTTTTATGTGCCTTGGAACTACCATGAGCCAGAGCCTGGGATCTATAACTTTAATGGCAGCCGGGACCTCATTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 ENSMUST00000185448.2 ENSMUST00000186173.7 |
||
| CDS-3UTR CAA 90 bp | GTAGCCTTCTTTATGGTCACTGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTGTGAAGAGCAAGATCTaGTCCCCTAGTAATGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: VAFFMVTVAITKGCCPVSVKSKI*SPSNAR Trigger: CCGAGCATTACTAGGGGACAAGATCTTGCTCTTCAC...AGACACAGGGCAGCATCCTTTGGTGATGGCCACAGTGACCATAAAGAAGGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR CAA 90 bp | AGCCTTCTTTATGGTCACTGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTCATCGTGTGGAATGATTTaGGCCCCAGTAATCCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLLYGHCGHHQRMLPCVSSCGMI*APVIQP Trigger: TGGCTGGATTACTGGGGCCAAAATCATTCCACACGA...TGAGACACAGGGCAGCATCCTTTGGTGATGGCCACAGTGACCATAAAGAAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGGATTGTAGCCTTCTTTATGGTCACTGTGGCCATCACCAAAGGATGCTGCGCAAAACTGAATGGATaGGGCCTTGGGGGCAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RGIVAFFMVTVAITKGCCAKLNG*GLGGRE Trigger: TTCTCTGCCCCCAAGGCCCAATCCATTCAGTTTTGC...GCAGCATCCTTTGGTGATGGCCACAGTGACCATAAAGAAGGCTACAATCCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR CAA 90 bp | TTATGGTCACTGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGACTCCAGACAAGCTTATCCACCTaGAGAGGGAACATCATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LWSLWPSPKDAALCLRLQTSLST*RGNIIH Trigger: GTGGATGATGTTCCCTCTCAAGGTGGATAAGCTTGT...CTGGAGTCTGAGACACAGGGCAGCATCCTTTGGTGATGGCCACAGTGACCATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
||
| CDS-3UTR CAA 90 bp | TTTGTTCAGACGCTGCTGGAGTTGTGGAGTGTCCCTCCAAGGCCTCATTCCCTTGCCCACTTAACTCCATaGGTTCAAAGGAACCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FVQTLLELWSVPPRPHSLAHLTP*VQRNLV Trigger: CACAAGGTTCCTTTGAACCAATGGAGTTAAGTGGGC...AAGGGAATGAGGCCTTGGAGGGACACTCCACAACTCCAGCAGCGTCTGAACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
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| CDS-3UTR CAA 90 bp | GATTGTAGCCTTCTTTATGGTCACTGTGGCCATCACCAAAGGATGCTGCCCTGTGTGAAGAGCAAGATCTaGTCCCCTAGTAATGCTCGG | + |
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Preference number: 5 (lower is better) Translates to: DCSLLYGHCGHHQRMLPCVKSKI*SPSNAR Trigger: CCGAGCATTACTAGGGGACAAGATCTTGCTCTTCAC...ACAGGGCAGCATCCTTTGGTGATGGCCACAGTGACCATAAAGAAGGCTACAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
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| CDS-3UTR CAA 90 bp | AGAAATGGAGGCCCGGCAGGCTGTCCAATCATTTTCCTTCCTTTTGTTCAGACGTCGTGTGGAATGATTTaGGCCCCAGTAATCCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: RNGGPAGCPIIFLPFVQTSCGMI*APVIQP Trigger: TGGCTGGATTACTGGGGCCAAAATCATTCCACACGA...CGTCTGAACAAAAGGAAGGAAAATGATTGGACAGCCTGCCGGGCCTCCATTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
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| CDS-3UTR CAA 90 bp | TTATGGTCACTGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGACTCCAGCATGAATCCCATTATTaGGCACCCAGAATGGTGTTG | + |
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Preference number: 5 (lower is better) Translates to: LWSLWPSPKDAALCLRLQHESHY*APRMVL Trigger: CAACACCATTCTGGGTGCCAAATAATGGGATTCATG...CTGGAGTCTGAGACACAGGGCAGCATCCTTTGGTGATGGCCACAGTGACCATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
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| CDS-3UTR CAA 90 bp | GATTGTAGCCTTCTTTATGGTCACTGTGGCCATCACCAAAGGATGCTGCCCTGTCCCAAGTTAAACCCATaGATCCACACTTGGCCCTTG | + |
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Preference number: 5 (lower is better) Translates to: DCSLLYGHCGHHQRMLPCPKLNP*IHTWPL Trigger: CAAGGGCCAAGTGTGGATCAATGGGTTTAACTTGGG...ACAGGGCAGCATCCTTTGGTGATGGCCACAGTGACCATAAAGAAGGCTACAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
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| CDS TCA 90 bp | CCCCATTGTGGTAGAGAAATGGATATATCTTTGGCAGCAAGACCTTaGACCAGGAGTCCACAGCTTCAAGGAAGGCAGGATCTGAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: PHCGREMDISLAARP*TRSPQLQGRQDLRF Trigger: GAACCTCAGATCCTGCCTTCCTTGAAGCTGTGGACTCCTGGTTCAAGGTCTTGCTGCCAAAGATATATCCATTTCTCTACCACAATGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 ENSMUST00000185448.2 |
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| CDS-3UTR CAA 90 bp | GTAGCCTTCTTTATGGTCACTGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTAAGATTCTGGTCACATaGTCAGCTGGGCCAAAATCT | + |
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Preference number: 5 (lower is better) Translates to: VAFFMVTVAITKGCCPVSKILVT*SAGPKS Trigger: AGATTTTGGCCCAGCTGACAATGTGACCAGAATCTT...AGACACAGGGCAGCATCCTTTGGTGATGGCCACAGTGACCATAAAGAAGGCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
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| CDS-3UTR CAA 90 bp | TGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGACTCCAGGGTCATCTTTCTAGTCAAATACAGTTCTaGTTTCAAACTCCGCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: WPSPKDAALCLRLQGHLSSQIQF*FQTPLQ Trigger: CTGGAGCGGAGTTTGAAACAAGAACTGTATTTGACT...AGAAAGATGACCCTGGAGTCTGAGACACAGGGCAGCATCCTTTGGTGATGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
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| CDS-3UTR CAA 90 bp | GATTACAACAAGGCTCGGGTGAGCTGGAAAAGGAGCTACAGAGCGGAGGGCATCCAATGCAAAGTGCTATaGAGGATAGGCTTATCCAAA | + |
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Preference number: 5 (lower is better) Translates to: DYNKARVSWKRSYRAEGIQCKVL*RIGLSK Trigger: TTTGGATAAGCCTATCCTCAATAGCACTTTGCATTG...GATGCCCTCCGCTCTGTAGCTCCTTTTCCAGCTCACCCGAGCCTTGTTGTAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
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| CDS GCA 90 bp | GATGTAAGGTCCTGGTCTCAGAATAACCAACAGGTTCACTTTAGCTaGCTCATTCAGGAAGGCAATGAGGTCCCGGCTGCCATTAAAGTT | + |
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Preference number: 5 (lower is better) Translates to: DVRSWSQNNQQVHFS*LIQEGNEVPAAIKV Trigger: AACTTTAATGGCAGCCGGGACCTCATTGCCTTCCTGAATGAGGCAGCTAAAGTGAACCTGTTGGTTATTCTGAGACCAGGACCTTACATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 ENSMUST00000185448.2 ENSMUST00000186173.7 |
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| CDS CCA 90 bp | GCTAATGATGTTGCCCCCATTGTGGTAGAGAAATGGATATATCTTTaGCAGCAAGACCTTGAACCAGGAGTCCACAGCTTCAAGGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: ANDVAPIVVEKWIYL*QQDLEPGVHSFKEG Trigger: GCCTTCCTTGAAGCTGTGGACTCCTGGTTCAAGGTCTTGCTGCCAAAGATATATCCATTTCTCTACCACAATGGGGGCAACATCATTAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 ENSMUST00000185448.2 |
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| CDS CCA 90 bp | CTCCACCTGAATGCTAATGATGTTGCCCCCATTGTGGTAGAGAAATaGATATATCTTTGGCAGCAAGACCTTGAACCAGGAGTCCACAGC | + |
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Preference number: 5 (lower is better) Translates to: LHLNANDVAPIVVEK*IYLWQQDLEPGVHS Trigger: GCTGTGGACTCCTGGTTCAAGGTCTTGCTGCCAAAGATATATCCATTTCTCTACCACAATGGGGGCAACATCATTAGCATTCAGGTGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 ENSMUST00000185448.2 |
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| CDS-3UTR CAA 90 bp | TGGCCATCACCAAAGGATGCTGCCCTGTGTCTCAGACTCCAGGGTCATCTTTCTCAATGCAAAGTGCTATaGAGGATAGGCTTATCCAAA | + |
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Preference number: 5 (lower is better) Translates to: WPSPKDAALCLRLQGHLSQCKVL*RIGLSK Trigger: TTTGGATAAGCCTATCCTCAATAGCACTTTGCATTG...AGAAAGATGACCCTGGAGTCTGAGACACAGGGCAGCATCCTTTGGTGATGGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
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| CDS TCA 90 bp | GAAAAGATTCTGGTCACATTGTCAGCAGGATCTGAGGTTCTCAGATaGATATTAGGGTTTCGAAGCAACCAAGAGGGGAGACCTCCCATC | + |
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Preference number: 5 (lower is better) Translates to: EKILVTLSAGSEVLR*ILGFRSNQEGRPPI Trigger: GATGGGAGGTCTCCCCTCTTGGTTGCTTCGAAACCCTAATATTCATCTGAGAACCTCAGATCCTGCTGACAATGTGACCAGAATCTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186173.7 |
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| CDS-3UTR CAA 90 bp | GATTGTAGCCTTCTTTATGGTCACTGTGGCCATCACCAAAGGATGCTGCCCTGTGGAATTTCCTGGAACTaGCTGATGACATTTCGAATT | + |
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Preference number: 5 (lower is better) Translates to: DCSLLYGHCGHHQRMLPCGISWN*LMTFRI Trigger: AATTCGAAATGTCATCAGCAAGTTCCAGGAAATTCC...ACAGGGCAGCATCCTTTGGTGATGGCCACAGTGACCATAAAGAAGGCTACAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
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| CDS-3UTR CAA 90 bp | ATAAAGTTTGGCAAGAAAACTGTGTGTGTACTTACAGTCAGAGGGATTGTAGCCAGGGACAGAGGAAGCTaGAGGCAGGGCTCTTTTCAT | + |
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Preference number: 5 (lower is better) Translates to: IKFGKKTVCVLTVRGIVARDRGS*RQGSFH Trigger: ATGAAAAGAGCCCTGCCTCAAGCTTCCTCTGTCCCT...GGCTACAATCCCTCTGACTGTAAGTACACACACAGTTTTCTTGCCAAACTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
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| CDS-3UTR CAA 90 bp | GTAGCCTTCTTTATGGTCACTGTGGCCATCACCAAAGGATGCTGCCCTGTGTCTTCCAGCAATGTGATTTaGTTGATTGATCTACCAAAC | + |
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Preference number: 5 (lower is better) Translates to: VAFFMVTVAITKGCCPVSSSNVI*LIDLPN Trigger: GTTTGGTAGATCAATCAACAAAATCACATTGCTGGA...AGACACAGGGCAGCATCCTTTGGTGATGGCCACAGTGACCATAAAGAAGGCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
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| CDS-3UTR CAA 90 bp | TTGACTCAAGAAATGGAGGCCCGGCAGGCTGTCCAATCATTTTCCTTCCTTTTGTCCAGCAATGTGATTTaGTTGATTGATCTACCAAAC | + |
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Preference number: 5 (lower is better) Translates to: LTQEMEARQAVQSFSFLLSSNVI*LIDLPN Trigger: GTTTGGTAGATCAATCAACAAAATCACATTGCTGGA...CAAAAGGAAGGAAAATGATTGGACAGCCTGCCGGGCCTCCATTTCTTGAGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155716.8 |
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| CDS-3UTR CAA 90 bp | AATAAAGTTTGGCAAGAAAACTGTGTGTGTACTTACAGTCAGAGGGATTGTAGCCATGAATCCCATTATTaGGCACCCAGAATGGTGTTG | + |
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Preference number: 5 (lower is better) Translates to: NKVWQENCVCTYSQRDCSHESHY*APRMVL Trigger: CAACACCATTCTGGGTGCCAAATAATGGGATTCATG...GCTACAATCCCTCTGACTGTAAGTACACACACAGTTTTCTTGCCAAACTTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
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| CDS-3UTR CAA 90 bp | ATAAAGTTTGGCAAGAAAACTGTGTGTGTACTTACAGTCAGAGGGATTGTAGCCAGTCAAATACAGTTCTaGTTTCAAACTCCGCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: IKFGKKTVCVLTVRGIVASQIQF*FQTPLQ Trigger: CTGGAGCGGAGTTTGAAACAAGAACTGTATTTGACT...GGCTACAATCCCTCTGACTGTAAGTACACACACAGTTTTCTTGCCAAACTTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
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| CDS-3UTR CAA 90 bp | ATAATAAAGTTTGGCAAGAAAACTGTGTGTGTACTTACAGTCAGAGGGATTGTAGCACCCAGAATGGTGTaGGTTCTAAAACAGGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: IIKFGKKTVCVLTVRGIVAPRMV*VLKQEK Trigger: CTTCTCCTGTTTTAGAACCAACACCATTCTGGGTGC...TACAATCCCTCTGACTGTAAGTACACACACAGTTTTCTTGCCAAACTTTATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
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| CDS-3UTR CAA 90 bp | TTAATCATAATAAAGTTTGGCAAGAAAACTGTGTGTGTACTTACAGTCAGAGGGGCCCACTTAACTCCATaGGTTCAAAGGAACCTTGTG | + |
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Preference number: 5 (lower is better) Translates to: LIIIKFGKKTVCVLTVRGAHLTP*VQRNLV Trigger: CACAAGGTTCCTTTGAACCAATGGAGTTAAGTGGGC...CCCTCTGACTGTAAGTACACACACAGTTTTCTTGCCAAACTTTATTATGATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
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| CDS-3UTR CAA 90 bp | AATAAAGTTTGGCAAGAAAACTGTGTGTGTACTTACAGTCAGAGGGATTGTAGCGGAATTTCCTGGAACTaGCTGATGACATTTCGAATT | + |
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Preference number: 5 (lower is better) Translates to: NKVWQENCVCTYSQRDCSGISWN*LMTFRI Trigger: AATTCGAAATGTCATCAGCAAGTTCCAGGAAATTCC...GCTACAATCCCTCTGACTGTAAGTACACACACAGTTTTCTTGCCAAACTTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
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| CDS GCA 72 bp | CCCACAGAACCGGCGGTACTCGAAAGTAGTGCAGGCTaGCAGAAACATAGCGGAAGGGGACCCCATCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: PTEPAVLESSAG*QKHSGRGPHPG Trigger: TCCTGGATGGGGTCCCCTTCCGCTATGTTTCTGGCAGCCTGCACTACTTTCGAGTACCGCCGGTTCTGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 ENSMUST00000185448.2 ENSMUST00000186173.7 |
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| CDS GCA 72 bp | TCCTGGTCTCAGAATAACCAACAGGTTCACTTTAGCTaGCTCATTCAGGAAGGCAATGAGGTCCCGGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: SWSQNNQQVHFS*LIQEGNEVPAA Trigger: GGCAGCCGGGACCTCATTGCCTTCCTGAATGAGGCAGCTAAAGTGAACCTGTTGGTTATTCTGAGACCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 ENSMUST00000185448.2 ENSMUST00000186173.7 |
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| CDS CCA 72 bp | GTCCCGGCTGCCATTAAAGTTATAGATCCCAGGCTCTaGCTCATGGTAGTTCCAAGGCACATAAAACTGCAC | + |
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Preference number: 6 (lower is better) Translates to: VPAAIKVIDPRL*LMVVPRHIKLH Trigger: GTGCAGTTTTATGTGCCTTGGAACTACCATGAGCCAGAGCCTGGGATCTATAACTTTAATGGCAGCCGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 ENSMUST00000185448.2 ENSMUST00000186173.7 |
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| CDS TCA 72 bp | ACAGCTTCAAGGAAGGCAGGATCTGAGGTTCTCAGATaGATATTAGGGTTTCGAAGCAACCAAGAGGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: TASRKAGSEVLR*ILGFRSNQEGR Trigger: TCTCCCCTCTTGGTTGCTTCGAAACCCTAATATTCATCTGAGAACCTCAGATCCTGCCTTCCTTGAAGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 ENSMUST00000185448.2 |
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| CDS TCA 72 bp | ATGCTCGGAAGAGGCCAGCTAAGTGTCTCATATACTTaGAGTCACAGGCCTTGTAGCTACCGTATTCGTTCT | + |
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Preference number: 6 (lower is better) Translates to: MLGRGQLSVSYT*SHRPCSYRIRS Trigger: AGAACGAATACGGTAGCTACAAGGCCTGTGACTTCAAGTATATGAGACACTTAGCTGGCCTCTTCCGAGCAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113623.8 ENSMUST00000155716.8 |
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| CDS TCA 72 bp | CTGGTCACATTGTCAGCAGGATCTGAGGTTCTCAGATaGATATTAGGGTTTCGAAGCAACCAAGAGGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: LVTLSAGSEVLR*ILGFRSNQEGR Trigger: TCTCCCCTCTTGGTTGCTTCGAAACCCTAATATTCATCTGAGAACCTCAGATCCTGCTGACAATGTGACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186173.7 |
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| CDS CCA 72 bp | CATGAGGTTCATACTCCCGAAGCAGGGAAAAGATTCTaGTCACATTGTCAGCAGGATCTGAGGTTCTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: HEVHTPEAGKRF*SHCQQDLRFSD Trigger: ATCTGAGAACCTCAGATCCTGCTGACAATGTGACCAGAATCTTTTCCCTGCTTCGGGAGTATGAACCTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186173.7 |
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| CDS TCA 72 bp | CAGGGAAAAGATTCTGGTCACATTGTCAGCAGGATCTaGGGTTCTCAGATGAATATTAGGGTTTCGAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: QGKDSGHIVSRI*GSQMNIRVSKQ Trigger: TTGCTTCGAAACCCTAATATTCATCTGAGAACCTCAGATCCTGCTGACAATGTGACCAGAATCTTTTCCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186173.7 |
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