Pregenerated sensors for GLB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045594Ensembl transcript IDs: ENSMUST00000063042.11, ENSMUST00000217583.2
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAACCTGTGTCTTCCTGTGGTGTCCACTCCCTTCAGCCTTCCCGGTaGCCACTAGGGTGGGAGGTCAGGCAAGGCGGGGCTGCAAAGTCA | + |
|
Preference number: 1 (lower is better) Translates to: QPVSSCGVHSLQPSR*PLGWEVRQGGAAKS Trigger: TGACTTTGCAGCCCCGCCTTGCCTGACCTCCCACCCTAGTGGCCACCGGGAAGGCTGAAGGGAGTGGACACCACAGGAAGACACAGGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| 3UTR GCA 90 bp | GCCTTCCCGGTGGCCACTAGGGTGGGAGGTCAGGCAAGGCGGGGCTaGAAAGTCACCAGCAGGGTACACACATTCCAGAAATGTAGCTTC | + |
|
Preference number: 1 (lower is better) Translates to: AFPVATRVGGQARRG*KVTSRVHTFQKCSF Trigger: GAAGCTACATTTCTGGAATGTGTGTACCCTGCTGGTGACTTTGCAGCCCCGCCTTGCCTGACCTCCCACCCTAGTGGCCACCGGGAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| 3UTR CCA 90 bp | CTTGGACCACCCAGGAAACTGGATGAAGGTGTCCTGTGGCAGGTCTaGGATGCCCGAGGGGATGGAGAAGTTGCCCACGTAAAAGGTGGG | + |
|
Preference number: 1 (lower is better) Translates to: LGPPRKLDEGVLWQV*DARGDGEVAHVKGG Trigger: CCCACCTTTTACGTGGGCAACTTCTCCATCCCCTCGGGCATCCCAGACCTGCCACAGGACACCTTCATCCAGTTTCCTGGGTGGTCCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| 3UTR TCA 90 bp | CCCGTCCACAGAGACGTAAGCCCGATCACGGACACCATTGAAGGGTaGAGAGAAAATGGGTTTCGGGTTACTGCAATCTTGAGGAAGCGT | + |
|
Preference number: 1 (lower is better) Translates to: PVHRDVSPITDTIEG*RENGFRVTAILRKR Trigger: ACGCTTCCTCAAGATTGCAGTAACCCGAAACCCATTTTCTCTTCACCCTTCAATGGTGTCCGTGATCGGGCTTACGTCTCTGTGGACGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| 3UTR TCA 90 bp | CCTCAAGCTGGTGAAGTAGCTTCAGGCAGCCCACTCAGGTCTAGTTaGGATTTAAGTCAGACCCTGGAGTTTAATACCTGCCTGATATAT | + |
|
Preference number: 1 (lower is better) Translates to: PQAGEVASGSPLRSS*DLSQTLEFNTCLIY Trigger: ATATATCAGGCAGGTATTAAACTCCAGGGTCTGACTTAAATCTCAACTAGACCTGAGTGGGCTGCCTGAAGCTACTTCACCAGCTTGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| 3UTR TCA 90 bp | CCATTGAAGGGTGAAGAGAAAATGGGTTTCGGGTTACTGCAATCTTaGGGAAGCGTTGTTCGGTACAGCACATACCCAAAATACTGTTTT | + |
|
Preference number: 1 (lower is better) Translates to: PLKGEEKMGFGLLQS*GSVVRYSTYPKYCF Trigger: AAAACAGTATTTTGGGTATGTGCTGTACCGAACAACGCTTCCTCAAGATTGCAGTAACCCGAAACCCATTTTCTCTTCACCCTTCAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| 3UTR-3UTR GCA 90 bp | CCGGTGGCCACTAGGGTGGGAGGTCAGGCAAGGCGGGGCTGCAAAGTCACCAGCACCAGAGTAGAGCTGTaGTCCCCAAGGCTCAGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: PVATRVGGQARRGCKVTSTRVEL*SPRLSL Trigger: GAGACTGAGCCTTGGGGAGCACAGCTCTACTCTGGT...GCTGGTGACTTTGCAGCCCCGCCTTGCCTGACCTCCCACCCTAGTGGCCACCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| 3UTR-3UTR GCA 90 bp | TCAGCCTTCCCGGTGGCCACTAGGGTGGGAGGTCAGGCAAGGCGGGGCTGCAAAACCAGAGTAGAGCTGTaGTCCCCAAGGCTCAGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: SAFPVATRVGGQARRGCKTRVEL*SPRLSL Trigger: GAGACTGAGCCTTGGGGAGCACAGCTCTACTCTGGT...TTTGCAGCCCCGCCTTGCCTGACCTCCCACCCTAGTGGCCACCGGGAAGGCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCTTCCCGGTGGCCACTAGGGTGGGAGGTCAGGCAAGGCGGGGCTGCAAAGTCAGGGATAGGGCCTTCTaGGACTTCTTTAAACTCCGT | + |
|
Preference number: 2 (lower is better) Translates to: AFPVATRVGGQARRGCKVRDRAF*DFFKLR Trigger: ACGGAGTTTAAAGAAGTCCCAGAAGGCCCTATCCCT...GACTTTGCAGCCCCGCCTTGCCTGACCTCCCACCCTAGTGGCCACCGGGAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGTGGTGTCCACTCCCTTCAGCCTTCCCGGTGGCCACTAGGGTGGGAGGTCAGTTGACCAGACTGGCTTaGAAAATGGCCACCGATGGT | + |
|
Preference number: 2 (lower is better) Translates to: LWCPLPSAFPVATRVGGQLTRLA*KMATDG Trigger: ACCATCGGTGGCCATTTTCCAAGCCAGTCTGGTCAA...CTGACCTCCCACCCTAGTGGCCACCGGGAAGGCTGAAGGGAGTGGACACCACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCAAACCAGCTCTCTCTTCTACCCACTTTGTACCTCAAGCTGGTGAAGTAGCTGTCCTGTGGCAGGTCTaGGATGCCCGAGGGGATGGA | + |
|
Preference number: 2 (lower is better) Translates to: PKPALSSTHFVPQAGEVAVLWQV*DARGDG Trigger: TCCATCCCCTCGGGCATCCCAGACCTGCCACAGGAC...AGCTACTTCACCAGCTTGAGGTACAAAGTGGGTAGAAGAGAGAGCTGGTTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| 3UTR CAA 90 bp | TGGTTGCGTACCATGGCCTCAGTGTTCAGTGGGAAGACCGTCCAGTaGGTGAGGACAGTGGAGTTGATAGTCATGTTGGAAATCAAACCC | + |
|
Preference number: 2 (lower is better) Translates to: WLRTMASVFSGKTVQ*VRTVELIVMLEIKP Trigger: GGGTTTGATTTCCAACATGACTATCAACTCCACTGTCCTCACCAACTGGACGGTCTTCCCACTGAACACTGAGGCCATGGTACGCAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| 3UTR-3UTR CCA 90 bp | ACGAACAAGGTCTTTTGTGGGCCCATTGTGGGCCAGTATCGGCCGAGGTTAAAGATAGAGGCTTTTCACTaGCCCATTGGGACACAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: TNKVFCGPIVGQYRPRLKIEAFH*PIGTQD Trigger: ATCCTGTGTCCCAATGGGCCAGTGAAAAGCCTCTAT...CTTTAACCTCGGCCGATACTGGCCCACAATGGGCCCACAAAAGACCTTGTTCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCAAACCAGCTCTCTCTTCTACCCACTTTGTACCTCAAGCTGGTGAAGTAGCTTTTTCACTGGCCCATTaGGACACAGGATACCCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: PKPALSSTHFVPQAGEVAFSLAH*DTGYPE Trigger: CTCTGGGTATCCTGTGTCCCAATGGGCCAGTGAAAA...AGCTACTTCACCAGCTTGAGGTACAAAGTGGGTAGAAGAGAGAGCTGGTTTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| 3UTR-3UTR TCA 90 bp | CCCAAACCAGCTCTCTCTTCTACCCACTTTGTACCTCAAGCTGGTGAAGTAGCTACTGTTTTACCTGAGTaGATGTCAGGGGATAGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: PKPALSSTHFVPQAGEVATVLPE*MSGDRG Trigger: GCCTCTATCCCCTGACATTCACTCAGGTAAAACAGT...AGCTACTTCACCAGCTTGAGGTACAAAGTGGGTAGAAGAGAGAGCTGGTTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| 3UTR CAA 90 bp | ACTGGCCCATTGGGACACAGGATACCCAGAGCTTCAGCCACTGTCTaGAACTTTCTCAGAGCAACTTTTCCATATGCAAATTTGGGTGTA | + |
|
Preference number: 2 (lower is better) Translates to: TGPLGHRIPRASATV*NFLRATFPYANLGV Trigger: TACACCCAAATTTGCATATGGAAAAGTTGCTCTGAGAAAGTTCAAGACAGTGGCTGAAGCTCTGGGTATCCTGTGTCCCAATGGGCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAATTCTATTCAATTGTATAGAGAGACCATTGACCAGACTGGCTTaGAAAATGGCCACCGATGGT | + |
|
Preference number: 2 (lower is better) Translates to: RERERERERILFNCIERPLTRLA*KMATDG Trigger: ACCATCGGTGGCCATTTTCCAAGCCAGTCTGGTCAA...TGGTCTCTCTATACAATTGAATAGAATTCTCTCTCTCTCTCTCTCTCTCTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| 3UTR CCA 72 bp | GTCCACTCCCTTCAGCCTTCCCGGTGGCCACTAGGGTaGGAGGTCAGGCAAGGCGGGGCTGCAAAGTCACCA | + |
|
Preference number: 3 (lower is better) Translates to: VHSLQPSRWPLG*EVRQGGAAKSP Trigger: TGGTGACTTTGCAGCCCCGCCTTGCCTGACCTCCCACCCTAGTGGCCACCGGGAAGGCTGAAGGGAGTGGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCTTCCCGGTGGCCACTAGGGTGGGAGGTCAGGCAAGGCGGGGCTGCAAAGTCCTTGACCAGACTGGCTaGGAAAATGGCCACCGATGG | + |
|
Preference number: 3 (lower is better) Translates to: AFPVATRVGGQARRGCKVLDQTG*ENGHRW Trigger: CCATCGGTGGCCATTTTCCAAGCCAGTCTGGTCAAG...GACTTTGCAGCCCCGCCTTGCCTGACCTCCCACCCTAGTGGCCACCGGGAAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| 3UTR TCA 72 bp | AGGTCCGAAGAATTGGAGGTCGACCGTCCGTCAAGGTaGCCCTCATCACTGGCCTCCCGGCCCCAGAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: RSEELEVDRPSR*PSSLASRPQRW Trigger: CCATCTCTGGGGCCGGGAGGCCAGTGATGAGGGTCACCTTGACGGACGGTCGACCTCCAATTCTTCGGACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| 3UTR GCA 72 bp | GTGGCCACTAGGGTGGGAGGTCAGGCAAGGCGGGGCTaGAAAGTCACCAGCAGGGTACACACATTCCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: VATRVGGQARRG*KVTSRVHTFQK Trigger: TTTCTGGAATGTGTGTACCCTGCTGGTGACTTTGCAGCCCCGCCTTGCCTGACCTCCCACCCTAGTGGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| 3UTR CCA 72 bp | CCCAGGAAACTGGATGAAGGTGTCCTGTGGCAGGTCTaGGATGCCCGAGGGGATGGAGAAGTTGCCCACGTA | + |
|
Preference number: 3 (lower is better) Translates to: PRKLDEGVLWQV*DARGDGEVAHV Trigger: TACGTGGGCAACTTCTCCATCCCCTCGGGCATCCCAGACCTGCCACAGGACACCTTCATCCAGTTTCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| 3UTR TCA 72 bp | TCCATACTTGACCCTTGGACCACCCAGGAAACTGGATaGAGGTGTCCTGTGGCAGGTCTGGGATGCCCGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SILDPWTTQETG*RCPVAGLGCPR Trigger: CCTCGGGCATCCCAGACCTGCCACAGGACACCTTCATCCAGTTTCCTGGGTGGTCCAAGGGTCAAGTATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCCGGTGGCCACTAGGGTGGGAGGTCAGGCAAGGCGGGGCTGCAAAGTCACCATTTCCATATGCAAATTaGGGTGTAGACGGAGGGATA | + |
|
Preference number: 3 (lower is better) Translates to: SRWPLGWEVRQGGAAKSPFPYAN*GVDGGI Trigger: TATCCCTCCGTCTACACCCAAATTTGCATATGGAAA...TGGTGACTTTGCAGCCCCGCCTTGCCTGACCTCCCACCCTAGTGGCCACCGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| 3UTR CCA 72 bp | CCAGAGATGGTTGCGTACCATGGCCTCAGTGTTCAGTaGGAAGACCGTCCAGTTGGTGAGGACAGTGGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: PEMVAYHGLSVQ*EDRPVGEDSGV Trigger: AACTCCACTGTCCTCACCAACTGGACGGTCTTCCCACTGAACACTGAGGCCATGGTACGCAACCATCTCTGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGCAAGGCGGGGCTGCAAAGTCACCAGCAGGGTACACACATTCCAGAAATGTACTTGACCAGACTGGCTaGGAAAATGGCCACCGATGG | + |
|
Preference number: 3 (lower is better) Translates to: RQGGAAKSPAGYTHSRNVLDQTG*ENGHRW Trigger: CCATCGGTGGCCATTTTCCAAGCCAGTCTGGTCAAG...TACATTTCTGGAATGTGTGTACCCTGCTGGTGACTTTGCAGCCCCGCCTTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCCAGCGTGGCTCCAGCCTTCCCCCGTATGTTCAGAGCTGTCATGAGGTTTCGAATCTTGAGGAAGCGTaGTTCGGTACAGCACATACC | + |
|
Preference number: 3 (lower is better) Translates to: VQRGSSLPPYVQSCHEVSNLEEA*FGTAHT Trigger: GGTATGTGCTGTACCGAACAACGCTTCCTCAAGATT...CGAAACCTCATGACAGCTCTGAACATACGGGGGAAGGCTGGAGCCACGCTGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| 3UTR TCA 72 bp | CCTCGCTGCAGGGTGCAAACTCTAGCTCCAACACTGTaGTGTTGTTTGGGGCTGAAGTGGTCAGGATGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: PRCRVQTLAPTL*CCLGLKWSGCS Trigger: GGAACATCCTGACCACTTCAGCCCCAAACAACATCACAGTGTTGGAGCTAGAGTTTGCACCCTGCAGCGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| 3UTR TCA 72 bp | CGTCCACAGAGACGTAAGCCCGATCACGGACACCATTaGAGGGTGAAGAGAAAATGGGTTTCGGGTTACTGC | + |
|
Preference number: 3 (lower is better) Translates to: RPQRRKPDHGHH*RVKRKWVSGYC Trigger: GCAGTAACCCGAAACCCATTTTCTCTTCACCCTTCAATGGTGTCCGTGATCGGGCTTACGTCTCTGTGGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCTCAGTGTTCAGTGGGAAGACCGTCCAGTTGGTGAGGACAGTGGAGTTGATAGCTTCAGCCACTGTCTaGAACTTTCTCAGAGCAACT | + |
|
Preference number: 3 (lower is better) Translates to: ASVFSGKTVQLVRTVELIASATV*NFLRAT Trigger: AGTTGCTCTGAGAAAGTTCAAGACAGTGGCTGAAGC...TATCAACTCCACTGTCCTCACCAACTGGACGGTCTTCCCACTGAACACTGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCAAACCAGCTCTCTCTTCTACCCACTTTGTACCTCAAGCTGGTGAAGTAGCTCTTTTCACTGGCCCATaGGGACACAGGATACCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: PKPALSSTHFVPQAGEVALFTGP*GHRIPR Trigger: TCTGGGTATCCTGTGTCCCAATGGGCCAGTGAAAAG...AGCTACTTCACCAGCTTGAGGTACAAAGTGGGTAGAAGAGAGAGCTGGTTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCTCAGTGTTCAGTGGGAAGACCGTCCAGTTGGTGAGGACAGTGGAGTTGATAGACATTATTCAAGTTTaGCTCCAACCTGTGTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: ASVFSGKTVQLVRTVELIDIIQV*LQPVSS Trigger: GGAAGACACAGGTTGGAGCAAAACTTGAATAATGTC...TATCAACTCCACTGTCCTCACCAACTGGACGGTCTTCCCACTGAACACTGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| 3UTR TCA 72 bp | GGTGAAGTAGCTTCAGGCAGCCCACTCAGGTCTAGTTaGGATTTAAGTCAGACCCTGGAGTTTAATACCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GEVASGSPLRSS*DLSQTLEFNTC Trigger: GCAGGTATTAAACTCCAGGGTCTGACTTAAATCTCAACTAGACCTGAGTGGGCTGCCTGAAGCTACTTCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| 3UTR TCA 72 bp | GGTGAAGAGAAAATGGGTTTCGGGTTACTGCAATCTTaGGGAAGCGTTGTTCGGTACAGCACATACCCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: GEEKMGFGLLQS*GSVVRYSTYPK Trigger: TTTTGGGTATGTGCTGTACCGAACAACGCTTCCTCAAGATTGCAGTAACCCGAAACCCATTTTCTCTTCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| 3UTR-3UTR CAA 90 bp | GATCTCTCACCAAGCAGATATCACAGAGATTCAGAAATAGTCAAAGCAGGATCATCCAACACTGTGATGTaGTTTGGGGCTGAAGTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: DLSPSRYHRDSEIVKAGSSNTVM*FGAEVV Trigger: GACCACTTCAGCCCCAAACAACATCACAGTGTTGGA...TGATCCTGCTTTGACTATTTCTGAATCTCTGTGATATCTGCTTGGTGAGAGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| CDS-3UTR TCA 90 bp | CCGGTGGCCACTAGGGTGGGAGGTCAGGCAAGGCGGGGCTGCAAAGTCACCAGCGACCGTCCGTCAAGGTaGCCCTCATCACTGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PVATRVGGQARRGCKVTSDRPSR*PSSLAS Trigger: GGAGGCCAGTGATGAGGGTCACCTTGACGGACGGTC...GCTGGTGACTTTGCAGCCCCGCCTTGCCTGACCTCCCACCCTAGTGGCCACCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS-3UTR GCA 90 bp | CTGTGGTGTCCACTCCCTTCAGCCTTCCCGGTGGCCACTAGGGTGGGAGGTCAGGCAGCGCCCAGCAGTTaGAGCAGTGCCAGGAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LWCPLPSAFPVATRVGGQAAPSS*SSARSG Trigger: CCCGCTCCTGGCACTGCTGCAACTGCTGGGCGCTGC...CTGACCTCCCACCCTAGTGGCCACCGGGAAGGCTGAAGGGAGTGGACACCACAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS-3UTR GCA 90 bp | CTGTGGTGTCCACTCCCTTCAGCCTTCCCGGTGGCCACTAGGGTGGGAGGTCAGCAGCAGTTGCAGCAGTaGCAGGAGCGGGAGCGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LWCPLPSAFPVATRVGGQQQLQQ*QERERR Trigger: ACGCCGCTCCCGCTCCTGGCACTGCTGCAACTGCTG...CTGACCTCCCACCCTAGTGGCCACCGGGAAGGCTGAAGGGAGTGGACACCACAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS-3UTR CCA 90 bp | GCCTTCCCGGTGGCCACTAGGGTGGGAGGTCAGGCAAGGCGGGGCTGCAAAGTCCCTGGTTGGGGTTCATaGAAGTTCCAGGGCACGTAC | + |
|
Preference number: 4 (lower is better) Translates to: AFPVATRVGGQARRGCKVPGWGS*KFQGTY Trigger: GTACGTGCCCTGGAACTTCCATGAACCCCAACCAGG...GACTTTGCAGCCCCGCCTTGCCTGACCTCCCACCCTAGTGGCCACCGGGAAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTCCCGGTGGCCACTAGGGTGGGAGGTCAGGCAAGGCGGGGCTGCAAAGTCTGTACAAGTTCACGTTaGCCCCACGGGCAAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AFPVATRVGGQARRGCKVCTSSR*PHGQAG Trigger: ACCTGCTTGCCCGTGGGGCCAACGTGAACTTGTACA...GACTTTGCAGCCCCGCCTTGCCTGACCTCCCACCCTAGTGGCCACCGGGAAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| CDS-3UTR TCA 90 bp | TCCCGGTGGCCACTAGGGTGGGAGGTCAGGCAAGGCGGGGCTGCAAAGTCACCAAGGAGTCCCAGCTCATaGGCCAGCTGGATGAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: SRWPLGWEVRQGGAAKSPRSPSS*ASWMKC Trigger: GCATTTCATCCAGCTGGCTCATGAGCTGGGACTCCT...TGGTGACTTTGCAGCCCCGCCTTGCCTGACCTCCCACCCTAGTGGCCACCGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| CDS-3UTR TCA 90 bp | TGGCCACTAGGGTGGGAGGTCAGGCAAGGCGGGGCTGCAAAGTCACCAGCAGGGAGGAGTCCCAGCTCATaGGCCAGCTGGATGAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: WPLGWEVRQGGAAKSPAGRSPSS*ASWMKC Trigger: GCATTTCATCCAGCTGGCTCATGAGCTGGGACTCCT...CCCTGCTGGTGACTTTGCAGCCCCGCCTTGCCTGACCTCCCACCCTAGTGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| CDS-3UTR TCA 90 bp | TGGCCACTAGGGTGGGAGGTCAGGCAAGGCGGGGCTGCAAAGTCACCAGCAGGGCCATTGATCCATACTTaGCCCTTGGACCACCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WPLGWEVRQGGAAKSPAGPLIHT*PLDHPG Trigger: TCCTGGGTGGTCCAAGGGTCAAGTATGGATCAATGG...CCCTGCTGGTGACTTTGCAGCCCCGCCTTGCCTGACCTCCCACCCTAGTGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS-3UTR TCA 90 bp | CCGGTGGCCACTAGGGTGGGAGGTCAGGCAAGGCGGGGCTGCAAAGTCACCAGCCTAGCTCCAACACTGTaGTGTTGTTTGGGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PVATRVGGQARRGCKVTSLAPTL*CCLGLK Trigger: CTTCAGCCCCAAACAACATCACAGTGTTGGAGCTAG...GCTGGTGACTTTGCAGCCCCGCCTTGCCTGACCTCCCACCCTAGTGGCCACCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS-3UTR CCA 90 bp | CCGGTGGCCACTAGGGTGGGAGGTCAGGCAAGGCGGGGCTGCAAAGTCACCAGCTTTTCACTGGCCCATTaGGACACAGGATACCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PVATRVGGQARRGCKVTSFSLAH*DTGYPE Trigger: CTCTGGGTATCCTGTGTCCCAATGGGCCAGTGAAAA...GCTGGTGACTTTGCAGCCCCGCCTTGCCTGACCTCCCACCCTAGTGGCCACCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS-3UTR TCA 90 bp | GCCTTCCCGGTGGCCACTAGGGTGGGAGGTCAGGCAAGGCGGGGCTGCAAAGTCACTGTTTTACCTGAGTaGATGTCAGGGGATAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AFPVATRVGGQARRGCKVTVLPE*MSGDRG Trigger: GCCTCTATCCCCTGACATTCACTCAGGTAAAACAGT...GACTTTGCAGCCCCGCCTTGCCTGACCTCCCACCCTAGTGGCCACCGGGAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS-3UTR TCA 90 bp | ACTAGGGTGGGAGGTCAGGCAAGGCGGGGCTGCAAAGTCACCAGCAGGGTACACGATGTTGTTTGGGGCTaGAGTGGTCAGGATGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TRVGGQARRGCKVTSRVHDVVWG*SGQDVP Trigger: AGGAACATCCTGACCACTTCAGCCCCAAACAACATC...GTGTACCCTGCTGGTGACTTTGCAGCCCCGCCTTGCCTGACCTCCCACCCTAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS-3UTR GCA 90 bp | GTCAGGCAAGGCGGGGCTGCAAAGTCACCAGCAGGGTACACACATTCCAGAAATGTGGCAGGTCTGGGATaGCCGAGGGGATGGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VRQGGAAKSPAGYTHSRNVAGLG*PRGWRS Trigger: ACTTCTCCATCCCCTCGGGCATCCCAGACCTGCCAC...ATTTCTGGAATGTGTGTACCCTGCTGGTGACTTTGCAGCCCCGCCTTGCCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS-3UTR CCA 90 bp | TCCCGGTGGCCACTAGGGTGGGAGGTCAGGCAAGGCGGGGCTGCAAAGTCACCAAGGGATAGGGCCTTCTaGGACTTCTTTAAACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRWPLGWEVRQGGAAKSPRDRAF*DFFKHL Trigger: CAGATGTTTAAAGAAGTCCCAGAAGGCCCTATCCCT...TGGTGACTTTGCAGCCCCGCCTTGCCTGACCTCCCACCCTAGTGGCCACCGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS-3UTR CCA 90 bp | AGGCAAGGCGGGGCTGCAAAGTCACCAGCAGGGTACACACATTCCAGAAATGTAGTCCTGTGGCAGGTCTaGGATGCCCGAGGGGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: RQGGAAKSPAGYTHSRNVVLWQV*DARGDG Trigger: TCCATCCCCTCGGGCATCCCAGACCTGCCACAGGAC...TACATTTCTGGAATGTGTGTACCCTGCTGGTGACTTTGCAGCCCCGCCTTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS-3UTR CCA 90 bp | GTCAGGCAAGGCGGGGCTGCAAAGTCACCAGCAGGGTACACACATTCCAGAAATATAGCTGGTGGGCTGTaGCTCATAGGGCGTGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VRQGGAAKSPAGYTHSRNIAGGL*LIGRVG Trigger: GCCAACACGCCCTATGAGCCACAGCCCACCAGCTAT...ATTTCTGGAATGTGTGTACCCTGCTGGTGACTTTGCAGCCCCGCCTTGCCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| CDS-3UTR CCA 90 bp | ACTAGGGTGGGAGGTCAGGCAAGGCGGGGCTGCAAAGTCACCAGCAGGGTACACTCATATTGTCCTGGTTaGGGTTCATGGAAGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TRVGGQARRGCKVTSRVHSYCPG*GSWKFQ Trigger: CTGGAACTTCCATGAACCCCAACCAGGACAATATGA...GTGTACCCTGCTGGTGACTTTGCAGCCCCGCCTTGCCTGACCTCCCACCCTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCCTTCCCCCGTATGTTCAGAGCTGTCATGAGGTTTCGATCAAGGATTCCTGCAGGGGCTTCATCTTaGGCAGAAGGACTGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PAFPRMFRAVMRFRSRIPAGASS*AEGLPA Trigger: GGCTGGCAGTCCTTCTGCCCAAGATGAAGCCCCTGC...AGGAATCCTTGATCGAAACCTCATGACAGCTCTGAACATACGGGGGAAGGCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| CDS-3UTR CCA 90 bp | GTCAGGCAAGGCGGGGCTGCAAAGTCACCAGCAGGGTACACACATTCCAGAAATGACCACCCAGGAAACTaGATGAAGGTGTCCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VRQGGAAKSPAGYTHSRNDHPGN*MKVSCG Trigger: GCCACAGGACACCTTCATCCAGTTTCCTGGGTGGTC...ATTTCTGGAATGTGTGTACCCTGCTGGTGACTTTGCAGCCCCGCCTTGCCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS-3UTR CCA 90 bp | ATTCAAGTTTTGCTCCAACCTGTGTCTTCCTGTGGTGTCCACTCCCTTCAGCCTGCAGGGGCTTCATCTTaGGCAGAAGGACTGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IQVLLQPVSSCGVHSLQPAGASS*AEGLPA Trigger: GGCTGGCAGTCCTTCTGCCCAAGATGAAGCCCCTGC...AGGCTGAAGGGAGTGGACACCACAGGAAGACACAGGTTGGAGCAAAACTTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| CDS-3UTR CCA 90 bp | CCCAAACCAGCTCTCTCTTCTACCCACTTTGTACCTCAAGCTGGTGAAGTAGCTATAGCTGGTGGGCTGTaGCTCATAGGGCGTGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PKPALSSTHFVPQAGEVAIAGGL*LIGRVG Trigger: GCCAACACGCCCTATGAGCCACAGCCCACCAGCTAT...AGCTACTTCACCAGCTTGAGGTACAAAGTGGGTAGAAGAGAGAGCTGGTTTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| CDS-3UTR CCA 90 bp | GTCAGGCAAGGCGGGGCTGCAAAGTCACCAGCAGGGTACACACATTCCAGAAATTCCATACTTGACCCTTaGACCACCCAGGAAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VRQGGAAKSPAGYTHSRNSILDP*TTQETG Trigger: TCCAGTTTCCTGGGTGGTCCAAGGGTCAAGTATGGA...ATTTCTGGAATGTGTGTACCCTGCTGGTGACTTTGCAGCCCCGCCTTGCCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS-3UTR TCA 90 bp | GTCAGGCAAGGCGGGGCTGCAAAGTCACCAGCAGGGTACACACATTCCAGAAATGACACCATTGAAGGGTaGAGAGAAAATGGGTTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VRQGGAAKSPAGYTHSRNDTIEG*RENGFR Trigger: CCGAAACCCATTTTCTCTTCACCCTTCAATGGTGTC...ATTTCTGGAATGTGTGTACCCTGCTGGTGACTTTGCAGCCCCGCCTTGCCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS-3UTR TCA 90 bp | ATTCAAGTTTTGCTCCAACCTGTGTCTTCCTGTGGTGTCCACTCCCTTCAGCCTACCCAGGAAACTGGATaGAGGTGTCCTGTGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IQVLLQPVSSCGVHSLQPTQETG*RCPVAG Trigger: ACCTGCCACAGGACACCTTCATCCAGTTTCCTGGGT...AGGCTGAAGGGAGTGGACACCACAGGAAGACACAGGTTGGAGCAAAACTTGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS-3UTR CCA 90 bp | GTTCAGTGGGAAGACCGTCCAGTTGGTGAGGACAGTGGAGTTGATAGTCATGTTCCTGGTTGGGGTTCATaGAAGTTCCAGGGCACGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VQWEDRPVGEDSGVDSHVPGWGS*KFQGTY Trigger: GTACGTGCCCTGGAACTTCCATGAACCCCAACCAGG...AACATGACTATCAACTCCACTGTCCTCACCAACTGGACGGTCTTCCCACTGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| CDS-3UTR CCA 90 bp | GTCAGGCAAGGCGGGGCTGCAAAGTCACCAGCAGGGTACACACATTCCAGAAATATAGAGGCTTTTCACTaGCCCATTGGGACACAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VRQGGAAKSPAGYTHSRNIEAFH*PIGTQD Trigger: ATCCTGTGTCCCAATGGGCCAGTGAAAAGCCTCTAT...ATTTCTGGAATGTGTGTACCCTGCTGGTGACTTTGCAGCCCCGCCTTGCCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS-3UTR CCA 90 bp | AGGCAAGGCGGGGCTGCAAAGTCACCAGCAGGGTACACACATTCCAGAAATGTACGAGATGTATCGGAATaGCTGTCCATCCTTGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RQGGAAKSPAGYTHSRNVRDVSE*LSILEE Trigger: TTCCTCAAGGATGGACAGCCATTCCGATACATCTCG...TACATTTCTGGAATGTGTGTACCCTGCTGGTGACTTTGCAGCCCCGCCTTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| 3UTR CAA 72 bp | ACCATGGCCTCAGTGTTCAGTGGGAAGACCGTCCAGTaGGTGAGGACAGTGGAGTTGATAGTCATGTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TMASVFSGKTVQ*VRTVELIVMLE Trigger: TTCCAACATGACTATCAACTCCACTGTCCTCACCAACTGGACGGTCTTCCCACTGAACACTGAGGCCATGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| CDS-3UTR CCA 90 bp | CGGGTTACTGCAATCTTGAGGAAGCGTTGTTCGGTACAGCACATACCCAAAATATGTACAAGTTCACGTTaGCCCCACGGGCAAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RVTAILRKRCSVQHIPKICTSSR*PHGQAG Trigger: ACCTGCTTGCCCGTGGGGCCAACGTGAACTTGTACA...TATTTTGGGTATGTGCTGTACCGAACAACGCTTCCTCAAGATTGCAGTAACCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| CDS-3UTR TCA 90 bp | CCAGCCTTCCCCCGTATGTTCAGAGCTGTCATGAGGTTTCGATCAAGGATTCCTGACCCACCATCTGAATaGCTTCTCGAAGAGCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PAFPRMFRAVMRFRSRIPDPPSE*LLEEQN Trigger: ATTTTGCTCTTCGAGAAGTCATTCAGATGGTGGGTC...AGGAATCCTTGATCGAAACCTCATGACAGCTCTGAACATACGGGGGAAGGCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| CDS-3UTR GCA 90 bp | TGCAAAGTCACCAGCAGGGTACACACATTCCAGAAATGTAGCTTCCATTCTAGCCTTGGGCAGAAGGACTaGCAGCCATTTATCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: CKVTSRVHTFQKCSFHSSLGQKD*QPFIHS Trigger: GCTGTGGATAAATGGCTGGCAGTCCTTCTGCCCAAG...GCTAGAATGGAAGCTACATTTCTGGAATGTGTGTACCCTGCTGGTGACTTTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| CDS-3UTR TCA 90 bp | AGATATCACAGAGATTCAGAAATAGTCAAAGCAGGATCAAAAACAAAGCCCTCTAGCAGCCCAGCTCTCTaGGAGTTCGAAGGACCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RYHRDSEIVKAGSKTKPSSSPAL*EFEGPT Trigger: GGTGGGTCCTTCGAACTCTCAGAGAGCTGGGCTGCT...AGAGGGCTTTGTTTTTGATCCTGCTTTGACTATTTCTGAATCTCTGTGATATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| 3UTR CAA 72 bp | AGTGGGAAGACCGTCCAGTTGGTGAGGACAGTGGAGTaGATAGTCATGTTGGAAATCAAACCCTTGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SGKTVQLVRTVE*IVMLEIKPLKS Trigger: TGACTTCAAGGGTTTGATTTCCAACATGACTATCAACTCCACTGTCCTCACCAACTGGACGGTCTTCCCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| CDS-3UTR GCA 90 bp | ATTTCAAATCAGGATAAAGGACATTATTCAAGTTTTGCTCCAACCTGTGTCTTCGTGGCGTACAGGTCCTaGAGGGTCCCACACTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ISNQDKGHYSSFAPTCVFVAYRS*RVPHFS Trigger: GCTGAAGTGTGGGACCCTGCAGGACCTGTACGCCAC...GAAGACACAGGTTGGAGCAAAACTTGAATAATGTCCTTTATCCTGATTTGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| CDS-3UTR GCA 90 bp | TATTCAAGTTTTGCTCCAACCTGTGTCTTCCTGTGGTGTCCACTCCCTTCAGCCAGCAACTTTTCCATATaGAAATTTGGGTGTAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: YSSFAPTCVFLWCPLPSASNFSI*KFGCRR Trigger: CCGTCTACACCCAAATTTGCATATGGAAAAGTTGCT...GGCTGAAGGGAGTGGACACCACAGGAAGACACAGGTTGGAGCAAAACTTGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS-3UTR CCA 90 bp | GATACCCAGAGCTTCAGCCACTGTCTTGAACTTTCTCAGAGCAACTTTTCCATATCATATTGTCCTGGTTaGGGTTCATGGAAGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DTQSFSHCLELSQSNFSISYCPG*GSWKFQ Trigger: CTGGAACTTCCATGAACCCCAACCAGGACAATATGA...TATGGAAAAGTTGCTCTGAGAAAGTTCAAGACAGTGGCTGAAGCTCTGGGTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| CDS-3UTR GCA 90 bp | AGATATCACAGAGATTCAGAAATAGTCAAAGCAGGATCAAAAACAAAGCCCTCTCTTGGGCAGAAGGACTaGCAGCCATTTATCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: RYHRDSEIVKAGSKTKPSLGQKD*QPFIHS Trigger: GCTGTGGATAAATGGCTGGCAGTCCTTCTGCCCAAG...AGAGGGCTTTGTTTTTGATCCTGCTTTGACTATTTCTGAATCTCTGTGATATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| 3UTR CAA 72 bp | GTCCAGTTGGTGAGGACAGTGGAGTTGATAGTCATGTaGGAAATCAAACCCTTGAAGTCATTGATGAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: VQLVRTVELIVM*EIKPLKSLMNL Trigger: CAGATTCATCAATGACTTCAAGGGTTTGATTTCCAACATGACTATCAACTCCACTGTCCTCACCAACTGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| CDS-3UTR TCA 90 bp | AATCAGGATAAAGGACATTATTCAAGTTTTGCTCCAACCTGTGTCTTCCTGTGGCTTCAGCCACTGTCTTaGACTTTCTCAGAGCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: NQDKGHYSSFAPTCVFLWLQPLS*TFSEQL Trigger: AAGTTGCTCTGAGAAAGTTCAAGACAGTGGCTGAAG...CCACAGGAAGACACAGGTTGGAGCAAAACTTGAATAATGTCCTTTATCCTGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| 3UTR CAA 72 bp | AAATGGGTTTCGGGTTACTGCAATCTTGAGGAAGCGTaGTTCGGTACAGCACATACCCAAAATACTGTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KWVSGYCNLEEA*FGTAHTQNTVL Trigger: TAAAACAGTATTTTGGGTATGTGCTGTACCGAACAACGCTTCCTCAAGATTGCAGTAACCCGAAACCCATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| CDS-3UTR TCA 90 bp | ATTTCAAATCAGGATAAAGGACATTATTCAAGTTTTGCTCCAACCTGTGTCTTCACTTCTTTAAACATCTaGATGACTTCTCGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ISNQDKGHYSSFAPTCVFTSLNI*MTSRRA Trigger: TGCTCTTCGAGAAGTCATTCAGATGTTTAAAGAAGT...GAAGACACAGGTTGGAGCAAAACTTGAATAATGTCCTTTATCCTGATTTGAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS-3UTR CAA 90 bp | CCGGTGGCCACTAGGGTGGGAGGTCAGGCAAGGCGGGGCTGCAAAGTCACCAGCAATGGCTGTCCATCCTaGAGGAAGCGGTCCCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PVATRVGGQARRGCKVTSNGCPS*RKRSRL Trigger: CAGCCGGGACCGCTTCCTCAAGGATGGACAGCCATT...GCTGGTGACTTTGCAGCCCCGCCTTGCCTGACCTCCCACCCTAGTGGCCACCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS-3UTR CAA 90 bp | TCCCGGTGGCCACTAGGGTGGGAGGTCAGGCAAGGCGGGGCTGCAAAGTCACCAAGCAGGGGCTTCATCTaGGGCAGAAGGACTGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRWPLGWEVRQGGAAKSPSRGFI*GRRTAS Trigger: GCTGGCAGTCCTTCTGCCCAAGATGAAGCCCCTGCT...TGGTGACTTTGCAGCCCCGCCTTGCCTGACCTCCCACCCTAGTGGCCACCGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| CDS-3UTR CAA 90 bp | ACTAGGGTGGGAGGTCAGGCAAGGCGGGGCTGCAAAGTCACCAGCAGGGTACACAGCAGGGGCTTCATCTaGGGCAGAAGGACTGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TRVGGQARRGCKVTSRVHSRGFI*GRRTAS Trigger: GCTGGCAGTCCTTCTGCCCAAGATGAAGCCCCTGCT...GTGTACCCTGCTGGTGACTTTGCAGCCCCGCCTTGCCTGACCTCCCACCCTAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| CDS-3UTR CAA 90 bp | GCCTTCCCGGTGGCCACTAGGGTGGGAGGTCAGGCAAGGCGGGGCTGCAAAGTCTCCAACACTGTGATGTaGTTTGGGGCTGAAGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: AFPVATRVGGQARRGCKVSNTVM*FGAEVV Trigger: GACCACTTCAGCCCCAAACAACATCACAGTGTTGGA...GACTTTGCAGCCCCGCCTTGCCTGACCTCCCACCCTAGTGGCCACCGGGAAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS-3UTR CAA 90 bp | CCGGTGGCCACTAGGGTGGGAGGTCAGGCAAGGCGGGGCTGCAAAGTCACCAGCGCTTCAGCCACTGTCTaGAACTTTCTCAGAGCAACT | + |
|
Preference number: 5 (lower is better) Translates to: PVATRVGGQARRGCKVTSASATV*NFLRAT Trigger: AGTTGCTCTGAGAAAGTTCAAGACAGTGGCTGAAGC...GCTGGTGACTTTGCAGCCCCGCCTTGCCTGACCTCCCACCCTAGTGGCCACCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS-3UTR CAA 90 bp | ACTAGGGTGGGAGGTCAGGCAAGGCGGGGCTGCAAAGTCACCAGCAGGGTACACCTTTTCACTGGCCCATaGGGACACAGGATACCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TRVGGQARRGCKVTSRVHLFTGP*GHRIPR Trigger: TCTGGGTATCCTGTGTCCCAATGGGCCAGTGAAAAG...GTGTACCCTGCTGGTGACTTTGCAGCCCCGCCTTGCCTGACCTCCCACCCTAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS CCA 90 bp | CCCAGCCTCGCTCAGTGGGGCGTCGTAGTCATAGCTGGTGGGCTGTaGCTCATAGGGCGTGTTGGCACCATTCCAATAGGCAAAATTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PSLAQWGVVVIAGGL*LIGRVGTIPIGKIG Trigger: ACCAATTTTGCCTATTGGAATGGTGCCAACACGCCCTATGAGCCACAGCCCACCAGCTATGACTACGACGCCCCACTGAGCGAGGCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| CDS-3UTR CAA 90 bp | GAGGCTTTTCACTGGCCCATTGGGACACAGGATACCCAGAGCTTCAGCCACTGTATGTACAAGTTCACGTaGGCCCCACGGGCAAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: EAFHWPIGTQDTQSFSHCMYKFT*APRASR Trigger: CCTGCTTGCCCGTGGGGCCAACGTGAACTTGTACAT...ACAGTGGCTGAAGCTCTGGGTATCCTGTGTCCCAATGGGCCAGTGAAAAGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| CDS-3UTR CAA 90 bp | TGGCCACTAGGGTGGGAGGTCAGGCAAGGCGGGGCTGCAAAGTCACCAGCAGGGTTTCCATATGCAAATTaGGGTGTAGACGGAGGGATA | + |
|
Preference number: 5 (lower is better) Translates to: WPLGWEVRQGGAAKSPAGFPYAN*GVDGGI Trigger: TATCCCTCCGTCTACACCCAAATTTGCATATGGAAA...CCCTGCTGGTGACTTTGCAGCCCCGCCTTGCCTGACCTCCCACCCTAGTGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS TCA 90 bp | CGCAGGCAAAGTAGGACCCGTACTCATTCTCAACCTGCACGGTTATaGTCGGTCCTCCGTTCTGGTAGAGCAGGGGCTTCATCTTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RRQSRTRTHSQPARL*SVLRSGRAGASSWA Trigger: TGCCCAAGATGAAGCCCCTGCTCTACCAGAACGGAGGACCGATCATAACCGTGCAGGTTGAGAATGAGTACGGGTCCTACTTTGCCTGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| CDS CCA 90 bp | GCGGGGTATCCGGAAGTAATGAATGCTTCCCGAGATGTATCGGAATaGCTGTCCATCCTTGAGGAAGCGGTCCCGGCTGTAGTCGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: AGYPEVMNASRDVSE*LSILEEAVPAVVEL Trigger: AAGCTCGACTACAGCCGGGACCGCTTCCTCAAGGATGGACAGCCATTCCGATACATCTCGGGAAGCATTCATTACTTCCGGATACCCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS-3UTR CAA 90 bp | AGGCAAGGCGGGGCTGCAAAGTCACCAGCAGGGTACACACATTCCAGAAATGTAATGTACAAGTTCACGTaGGCCCCACGGGCAAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RQGGAAKSPAGYTHSRNVMYKFT*APRASR Trigger: CCTGCTTGCCCGTGGGGCCAACGTGAACTTGTACAT...TACATTTCTGGAATGTGTGTACCCTGCTGGTGACTTTGCAGCCCCGCCTTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| CDS TCA 90 bp | CAGGCCTCAGGATCACCAGGAGTCCCAGCTCATGAGCCAGCTGGATaGAATGCTCCACATCACGGTCCCCAGAAAACTCATATTGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QASGSPGVPAHEPAG*NAPHHGPQKTHIVL Trigger: CAGGACAATATGAGTTTTCTGGGGACCGTGATGTGGAGCATTTCATCCAGCTGGCTCATGAGCTGGGACTCCTGGTGATCCTGAGGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| CDS-3UTR CAA 90 bp | CTGTGGTGTCCACTCCCTTCAGCCTTCCCGGTGGCCACTAGGGTGGGAGGTCAGTTGGAAATCAAACCCTaGAAGTCATTGATGAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: LWCPLPSAFPVATRVGGQLEIKP*KSLMNL Trigger: CAGATTCATCAATGACTTCAAGGGTTTGATTTCCAA...CTGACCTCCCACCCTAGTGGCCACCGGGAAGGCTGAAGGGAGTGGACACCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS-3UTR CAA 90 bp | AGGCGGGGCTGCAAAGTCACCAGCAGGGTACACACATTCCAGAAATGTAGCTTCGTGAGGACAGTGGAGTaGATAGTCATGTTGGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: RRGCKVTSRVHTFQKCSFVRTVE*IVMLEI Trigger: GATTTCCAACATGACTATCAACTCCACTGTCCTCAC...GAAGCTACATTTCTGGAATGTGTGTACCCTGCTGGTGACTTTGCAGCCCCGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS-3UTR CAA 90 bp | TGCAAAGTCACCAGCAGGGTACACACATTCCAGAAATGTAGCTTCCATTCTAGCGCCATTGATCCATACTaGACCCTTGGACCACCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CKVTSRVHTFQKCSFHSSAIDPY*TLGPPR Trigger: CCTGGGTGGTCCAAGGGTCAAGTATGGATCAATGGC...GCTAGAATGGAAGCTACATTTCTGGAATGTGTGTACCCTGCTGGTGACTTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS CCA 90 bp | AAATGCTCCACATCACGGTCCCCAGAAAACTCATATTGTCCTGGTTaGGGTTCATGGAAGTTCCAGGGCACGTACATCTGGATAGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: KCSTSRSPENSYCPG*GSWKFQGTYIWIAF Trigger: GAATGCTATCCAGATGTACGTGCCCTGGAACTTCCATGAACCCCAACCAGGACAATATGAGTTTTCTGGGGACCGTGATGTGGAGCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS-3UTR CAA 90 bp | ATTCAAGTTTTGCTCCAACCTGTGTCTTCCTGTGGTGTCCACTCCCTTCAGCCTAATCTTGAGGAAGCGTaGTTCGGTACAGCACATACC | + |
|
Preference number: 5 (lower is better) Translates to: IQVLLQPVSSCGVHSLQPNLEEA*FGTAHT Trigger: GGTATGTGCTGTACCGAACAACGCTTCCTCAAGATT...AGGCTGAAGGGAGTGGACACCACAGGAAGACACAGGTTGGAGCAAAACTTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS-3UTR CAA 90 bp | AGGCAAGGCGGGGCTGCAAAGTCACCAGCAGGGTACACACATTCCAGAAATGTAAAAGCTTGTGTGATATaGTTGCCTGTTCCAAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: RQGGAAKSPAGYTHSRNVKACVI*LPVPKS Trigger: GGATTTTGGAACAGGCAACAATATCACACAAGCTTT...TACATTTCTGGAATGTGTGTACCCTGCTGGTGACTTTGCAGCCCCGCCTTGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGAGCTTCAGCCACTGTCTTGAACTTTCTCAGAGCAACTTTTCCATATGCAAAAGCTTGTGTGATATaGTTGCCTGTTCCAAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: PRASATVLNFLRATFPYAKACVI*LPVPKS Trigger: GGATTTTGGAACAGGCAACAATATCACACAAGCTTT...TGCATATGGAAAAGTTGCTCTGAGAAAGTTCAAGACAGTGGCTGAAGCTCTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217583.2 |
||
| CDS CCA 90 bp | TTTTCCATATGCAAATTTGGGTGTAGACGGAGGGATAGGGCCTTCTaGGACTTCTTTAAACATCTGAATGACTTCTCGAAGAGCAAAATA | + |
|
Preference number: 5 (lower is better) Translates to: FSICKFGCRRRDRAF*DFFKHLNDFSKSKI Trigger: TATTTTGCTCTTCGAGAAGTCATTCAGATGTTTAAAGAAGTCCCAGAAGGCCCTATCCCTCCGTCTACACCCAAATTTGCATATGGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS-3UTR CAA 90 bp | ATTTCAAATCAGGATAAAGGACATTATTCAAGTTTTGCTCCAACCTGTGTCTTCGAGTTGATAGTCATGTaGGAAATCAAACCCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ISNQDKGHYSSFAPTCVFELIVM*EIKPLK Trigger: CTTCAAGGGTTTGATTTCCAACATGACTATCAACTC...GAAGACACAGGTTGGAGCAAAACTTGAATAATGTCCTTTATCCTGATTTGAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS CCA 72 bp | CCCCAGCCTCGCTCAGTGGGGCGTCGTAGTCATAGCTaGTGGGCTGTGGCTCATAGGGCGTGTTGGCACCAT | + |
|
Preference number: 6 (lower is better) Translates to: PQPRSVGRRSHS*WAVAHRACWHH Trigger: ATGGTGCCAACACGCCCTATGAGCCACAGCCCACCAGCTATGACTACGACGCCCCACTGAGCGAGGCTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| CDS CCA 72 bp | CAGCCTCGCTCAGTGGGGCGTCGTAGTCATAGCTGGTaGGCTGTGGCTCATAGGGCGTGTTGGCACCATTCC | + |
|
Preference number: 6 (lower is better) Translates to: QPRSVGRRSHSW*AVAHRACWHHS Trigger: GGAATGGTGCCAACACGCCCTATGAGCCACAGCCCACCAGCTATGACTACGACGCCCCACTGAGCGAGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| CDS CCA 72 bp | AAAATACTTCTTAGTGAGGTCCCCAGCCTCGCTCAGTaGGGCGTCGTAGTCATAGCTGGTGGGCTGTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: KILLSEVPSLAQ*GVVVIAGGLWL Trigger: GAGCCACAGCCCACCAGCTATGACTACGACGCCCCACTGAGCGAGGCTGGGGACCTCACTAAGAAGTATTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| CDS CCA 72 bp | TCGGTCCTCCGTTCTGGTAGAGCAGGGGCTTCATCTTaGGCAGAAGGACTGCCAGCCATTTATCCACAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: SVLRSGRAGASS*AEGLPAIYPQL Trigger: TAGCTGTGGATAAATGGCTGGCAGTCCTTCTGCCCAAGATGAAGCCCCTGCTCTACCAGAACGGAGGACCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| CDS TCA 72 bp | GGATCACCAGGAGTCCCAGCTCATGAGCCAGCTGGATaGAATGCTCCACATCACGGTCCCCAGAAAACTCAT | + |
|
Preference number: 6 (lower is better) Translates to: GSPGVPAHEPAG*NAPHHGPQKTH Trigger: ATGAGTTTTCTGGGGACCGTGATGTGGAGCATTTCATCCAGCTGGCTCATGAGCTGGGACTCCTGGTGATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| CDS CCA 72 bp | CCGGAAGTAATGAATGCTTCCCGAGATGTATCGGAATaGCTGTCCATCCTTGAGGAAGCGGTCCCGGCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: PEVMNASRDVSE*LSILEEAVPAV Trigger: TACAGCCGGGACCGCTTCCTCAAGGATGGACAGCCATTCCGATACATCTCGGGAAGCATTCATTACTTCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS GCA 72 bp | CCTCCCAGTAGAAGCGGGGTATCCGGAAGTAATGAATaGTTCCCGAGATGTATCGGAATGGCTGTCCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: PPSRSGVSGSNE*FPRCIGMAVHP Trigger: AGGATGGACAGCCATTCCGATACATCTCGGGAAGCATTCATTACTTCCGGATACCCCGCTTCTACTGGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS CCA 72 bp | GACTGCCAGCCATTTATCCACAGCTACAAGGTAGTCTaGGTCAGAAGACCGGAGAACGATAGATTGTTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: DCQPFIHSYKVV*VRRPENDRLFL Trigger: GAGAAACAATCTATCGTTCTCCGGTCTTCTGACCCAGACTACCTTGTAGCTGTGGATAAATGGCTGGCAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| CDS CAA 90 bp | GATCAAAGGTCCTTTAGGTTCAAACTTCCTCTGGACCAGGAAAGCTaGTGTGATATTGTTGCCTGTTCCAAAATCCACTGTGGCGTACAG | + |
|
Preference number: 6 (lower is better) Translates to: DQRSFRFKLPLDQES*CDIVACSKIHCGVQ Trigger: CTGTACGCCACAGTGGATTTTGGAACAGGCAACAATATCACACAAGCTTTCCTGGTCCAGAGGAAGTTTGAACCTAAAGGACCTTTGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||
| CDS CCA 72 bp | TGCAAATTTGGGTGTAGACGGAGGGATAGGGCCTTCTaGGACTTCTTTAAACATCTGAATGACTTCTCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: CKFGCRRRDRAF*DFFKHLNDFSK Trigger: CTTCGAGAAGTCATTCAGATGTTTAAAGAAGTCCCAGAAGGCCCTATCCCTCCGTCTACACCCAAATTTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063042.11 |
||
| CDS CAA 72 bp | TCCTTTAGGTTCAAACTTCCTCTGGACCAGGAAAGCTaGTGTGATATTGTTGCCTGTTCCAAAATCCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: SFRFKLPLDQES*CDIVACSKIHC Trigger: ACAGTGGATTTTGGAACAGGCAACAATATCACACAAGCTTTCCTGGTCCAGAGGAAGTTTGAACCTAAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063042.11 ENSMUST00000217583.2 |
||