RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GKN2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030049

Ensembl transcript IDs: ENSMUST00000032128.6

Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp TCCTCCACAGATGGAGACTCCCAGGATCCCCAGGAGTCCAACCTTTaGACAGGCTCCAGTGCTCACCTCTTTTGGCTTTGTAGCCACCTC +
Preference number: 5 (lower is better)
Translates to: SSTDGDSQDPQESNL*TGSSAHLFWLCSHL
Trigger: GAGGTGGCTACAAAGCCAAAAGAGGTGAGCACTGGAGCCTGTGCAAAGGTTGGACTCCTGGGGATCCTGGGAGTCTCCATCTGTGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032128.6
CDS GCA 90 bp GTGGAGGAGCACGAGCCTGAGTGGATGTTGATGGTGGCCGTGTTCTaGTGGTTGTCGATGGTCACTGTCTCCTGGATATTGCCTCCATTT +
Preference number: 5 (lower is better)
Translates to: VEEHEPEWMLMVAVF*WLSMVTVSWILPPF
Trigger: AAATGGAGGCAATATCCAGGAGACAGTGACCATCGACAACCAGCAGAACACGGCCACCATCAACATCCACTCAGGCTCGTGCTCCTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032128.6
CDS CCA 90 bp GAGGAGCACGAGCCTGAGTGGATGTTGATGGTGGCCGTGTTCTGCTaGTTGTCGATGGTCACTGTCTCCTGGATATTGCCTCCATTTTTG +
Preference number: 5 (lower is better)
Translates to: EEHEPEWMLMVAVFC*LSMVTVSWILPPFL
Trigger: CAAAAATGGAGGCAATATCCAGGAGACAGTGACCATCGACAACCAGCAGAACACGGCCACCATCAACATCCACTCAGGCTCGTGCTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032128.6
CDS TCA 90 bp TATAGTCAAAAATCGTGGTGGAGGAGCACGAGCCTGAGTGGATGTTaGTGGTGGCCGTGTTCTGCTGGTTGTCGATGGTCACTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: YSQKSWWRSTSLSGC*WWPCSAGCRWSLSP
Trigger: AGGAGACAGTGACCATCGACAACCAGCAGAACACGGCCACCATCAACATCCACTCAGGCTCGTGCTCCTCCACCACGATTTTTGACTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032128.6
CDS TCA 90 bp GTAACCATGCTTATAGTCAAAAATCGTGGTGGAGGAGCACGAGCCTaGGTGGATGTTGATGGTGGCCGTGTTCTGCTGGTTGTCGATGGT +
Preference number: 5 (lower is better)
Translates to: VTMLIVKNRGGGARA*VDVDGGRVLLVVDG
Trigger: ACCATCGACAACCAGCAGAACACGGCCACCATCAACATCCACTCAGGCTCGTGCTCCTCCACCACGATTTTTGACTATAAGCATGGTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032128.6
CDS CCA 90 bp CGTGATCAGAGACTTCAGAGGGTTGTACCTGACCCAGGTATACTCTaGGGAGTCGATAGCATTCATTGTCTGCTTCTCGTAGAGGAACCG +
Preference number: 5 (lower is better)
Translates to: RDQRLQRVVPDPGIL*GVDSIHCLLLVEEP
Trigger: CGGTTCCTCTACGAGAAGCAGACAATGAATGCTATCGACTCCCCAGAGTATACCTGGGTCAGGTACAACCCTCTGAAGTCTCTGATCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032128.6
CDS GCA 90 bp CCTCCATTTTTGCTTGGGACGAAGATATTAAAAATCTCCTCTGCCTaGGATTGTATTCCAAAGATGGACAGCACCACCAGAAATGCCACG +
Preference number: 5 (lower is better)
Translates to: PPFLLGTKILKISSA*DCIPKMDSTTRNAT
Trigger: CGTGGCATTTCTGGTGGTGCTGTCCATCTTTGGAATACAATCGCAGGCAGAGGAGATTTTTAATATCTTCGTCCCAAGCAAAAATGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000032128.6
CDS CCA 90 bp GTTGTCGATGGTCACTGTCTCCTGGATATTGCCTCCATTTTTGCTTaGGACGAAGATATTAAAAATCTCCTCTGCCTGCGATTGTATTCC +
Preference number: 5 (lower is better)
Translates to: VVDGHCLLDIASIFA*DEDIKNLLCLRLYS
Trigger: GGAATACAATCGCAGGCAGAGGAGATTTTTAATATCTTCGTCCCAAGCAAAAATGGAGGCAATATCCAGGAGACAGTGACCATCGACAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000032128.6
CDS GCA 90 bp ATTGCCTCCATTTTTGCTTGGGACGAAGATATTAAAAATCTCCTCTaGCTGCGATTGTATTCCAAAGATGGACAGCACCACCAGAAATGC +
Preference number: 5 (lower is better)
Translates to: IASIFAWDEDIKNLL*LRLYSKDGQHHQKC
Trigger: GCATTTCTGGTGGTGCTGTCCATCTTTGGAATACAATCGCAGGCAGAGGAGATTTTTAATATCTTCGTCCCAAGCAAAAATGGAGGCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000032128.6
CDS GCA 72 bp GATGGAGACTCCCAGGATCCCCAGGAGTCCAACCTTTaGACAGGCTCCAGTGCTCACCTCTTTTGGCTTTGT +
Preference number: 6 (lower is better)
Translates to: DGDSQDPQESNL*TGSSAHLFWLC
Trigger: ACAAAGCCAAAAGAGGTGAGCACTGGAGCCTGTGCAAAGGTTGGACTCCTGGGGATCCTGGGAGTCTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032128.6
CDS CAA 72 bp AGATGGAGACTCCCAGGATCCCCAGGAGTCCAACCTTaGCACAGGCTCCAGTGCTCACCTCTTTTGGCTTTG +
Preference number: 6 (lower is better)
Translates to: RWRLPGSPGVQP*HRLQCSPLLAL
Trigger: CAAAGCCAAAAGAGGTGAGCACTGGAGCCTGTGCAAAGGTTGGACTCCTGGGGATCCTGGGAGTCTCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000032128.6
CDS GCA 72 bp CACGAGCCTGAGTGGATGTTGATGGTGGCCGTGTTCTaGTGGTTGTCGATGGTCACTGTCTCCTGGATATTG +
Preference number: 6 (lower is better)
Translates to: HEPEWMLMVAVF*WLSMVTVSWIL
Trigger: CAATATCCAGGAGACAGTGACCATCGACAACCAGCAGAACACGGCCACCATCAACATCCACTCAGGCTCGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032128.6
CDS CCA 72 bp GAGCCTGAGTGGATGTTGATGGTGGCCGTGTTCTGCTaGTTGTCGATGGTCACTGTCTCCTGGATATTGCCT +
Preference number: 6 (lower is better)
Translates to: EPEWMLMVAVFC*LSMVTVSWILP
Trigger: AGGCAATATCCAGGAGACAGTGACCATCGACAACCAGCAGAACACGGCCACCATCAACATCCACTCAGGCTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032128.6
CDS CAA 72 bp CCTGAGTGGATGTTGATGGTGGCCGTGTTCTGCTGGTaGTCGATGGTCACTGTCTCCTGGATATTGCCTCCA +
Preference number: 6 (lower is better)
Translates to: PEWMLMVAVFCW*SMVTVSWILPP
Trigger: TGGAGGCAATATCCAGGAGACAGTGACCATCGACAACCAGCAGAACACGGCCACCATCAACATCCACTCAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032128.6
CDS CAA 90 bp GAGCACGAGCCTGAGTGGATGTTGATGGTGGCCGTGTTCTGCTGGTaGTCGATGGTCACTGTCTCCTGGATATTGCCTCCATTTTTGCTT +
Preference number: 6 (lower is better)
Translates to: EHEPEWMLMVAVFCW*SMVTVSWILPPFLL
Trigger: AAGCAAAAATGGAGGCAATATCCAGGAGACAGTGACCATCGACAACCAGCAGAACACGGCCACCATCAACATCCACTCAGGCTCGTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032128.6
CDS TCA 72 bp CTTATAGTCAAAAATCGTGGTGGAGGAGCACGAGCCTaGGTGGATGTTGATGGTGGCCGTGTTCTGCTGGTT +
Preference number: 6 (lower is better)
Translates to: LIVKNRGGGARA*VDVDGGRVLLV
Trigger: AACCAGCAGAACACGGCCACCATCAACATCCACTCAGGCTCGTGCTCCTCCACCACGATTTTTGACTATAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032128.6
CDS GCA 72 bp GATGACGTAACAGGCTCTCCGGGAGAGCACCCGGGATaGGATGTAACCATGCTTATAGTCAAAAATCGTGGT +
Preference number: 6 (lower is better)
Translates to: DDVTGSPGEHPG*DVTMLIVKNRG
Trigger: ACCACGATTTTTGACTATAAGCATGGTTACATCGCATCCCGGGTGCTCTCCCGGAGAGCCTGTTACGTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032128.6
CDS CAA 72 bp AACCAGTCCACCTTCGTGATCAGAGACTTCAGAGGGTaGTACCTGACCCAGGTATACTCTGGGGAGTCGATA +
Preference number: 6 (lower is better)
Translates to: NQSTFVIRDFRG*YLTQVYSGESI
Trigger: TATCGACTCCCCAGAGTATACCTGGGTCAGGTACAACCCTCTGAAGTCTCTGATCACGAAGGTGGACTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032128.6
CDS CAA 90 bp TGGGGAGTCGATAGCATTCATTGTCTGCTTCTCGTAGAGGAACCGTaGGAGTTTGTCCAGAGCAGGGATGGCTTTGTGGTCCATCTTGAT +
Preference number: 6 (lower is better)
Translates to: WGVDSIHCLLLVEEP*EFVQSRDGFVVHLD
Trigger: ATCAAGATGGACCACAAAGCCATCCCTGCTCTGGACAAACTCCAACGGTTCCTCTACGAGAAGCAGACAATGAATGCTATCGACTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032128.6
CDS CAA 90 bp CCAAACAGGAACCAGTCCACCTTCGTGATCAGAGACTTCAGAGGGTaGTACCTGACCCAGGTATACTCTGGGGAGTCGATAGCATTCATT +
Preference number: 6 (lower is better)
Translates to: PNRNQSTFVIRDFRG*YLTQVYSGESIAFI
Trigger: AATGAATGCTATCGACTCCCCAGAGTATACCTGGGTCAGGTACAACCCTCTGAAGTCTCTGATCACGAAGGTGGACTGGTTCCTGTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000032128.6
CDS CCA 72 bp AGACTTCAGAGGGTTGTACCTGACCCAGGTATACTCTaGGGAGTCGATAGCATTCATTGTCTGCTTCTCGTA +
Preference number: 6 (lower is better)
Translates to: RLQRVVPDPGIL*GVDSIHCLLLV
Trigger: TACGAGAAGCAGACAATGAATGCTATCGACTCCCCAGAGTATACCTGGGTCAGGTACAACCCTCTGAAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000032128.6
CDS CAA 90 bp GTGGCCGTGTTCTGCTGGTTGTCGATGGTCACTGTCTCCTGGATATaGCCTCCATTTTTGCTTGGGACGAAGATATTAAAAATCTCCTCT +
Preference number: 6 (lower is better)
Translates to: VAVFCWLSMVTVSWI*PPFLLGTKILKISS
Trigger: AGAGGAGATTTTTAATATCTTCGTCCCAAGCAAAAATGGAGGCAATATCCAGGAGACAGTGACCATCGACAACCAGCAGAACACGGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000032128.6
CDS CAA 90 bp ATTTTTGCTTGGGACGAAGATATTAAAAATCTCCTCTGCCTGCGATaGTATTCCAAAGATGGACAGCACCACCAGAAATGCCACGAGGGG +
Preference number: 6 (lower is better)
Translates to: IFAWDEDIKNLLCLR*YSKDGQHHQKCHEG
Trigger: CCCCTCGTGGCATTTCTGGTGGTGCTGTCCATCTTTGGAATACAATCGCAGGCAGAGGAGATTTTTAATATCTTCGTCCCAAGCAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000032128.6
CDS CAA 90 bp TGCTGGTTGTCGATGGTCACTGTCTCCTGGATATTGCCTCCATTTTaGCTTGGGACGAAGATATTAAAAATCTCCTCTGCCTGCGATTGT +
Preference number: 6 (lower is better)
Translates to: CWLSMVTVSWILPPF*LGTKILKISSACDC
Trigger: ACAATCGCAGGCAGAGGAGATTTTTAATATCTTCGTCCCAAGCAAAAATGGAGGCAATATCCAGGAGACAGTGACCATCGACAACCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000032128.6
CDS GCA 72 bp TTGCTTGGGACGAAGATATTAAAAATCTCCTCTGCCTaGGATTGTATTCCAAAGATGGACAGCACCACCAGA +
Preference number: 6 (lower is better)
Translates to: LLGTKILKISSA*DCIPKMDSTTR
Trigger: TCTGGTGGTGCTGTCCATCTTTGGAATACAATCGCAGGCAGAGGAGATTTTTAATATCTTCGTCCCAAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032128.6
CDS CAA 72 bp TGGGACGAAGATATTAAAAATCTCCTCTGCCTGCGATaGTATTCCAAAGATGGACAGCACCACCAGAAATGC +
Preference number: 6 (lower is better)
Translates to: WDEDIKNLLCLR*YSKDGQHHQKC
Trigger: GCATTTCTGGTGGTGCTGTCCATCTTTGGAATACAATCGCAGGCAGAGGAGATTTTTAATATCTTCGTCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032128.6
CDS CAA 72 bp TTCTGCTGGTTGTCGATGGTCACTGTCTCCTGGATATaGCCTCCATTTTTGCTTGGGACGAAGATATTAAAA +
Preference number: 6 (lower is better)
Translates to: FCWLSMVTVSWI*PPFLLGTKILK
Trigger: TTTTAATATCTTCGTCCCAAGCAAAAATGGAGGCAATATCCAGGAGACAGTGACCATCGACAACCAGCAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000032128.6
CDS GCA 72 bp ATTTTTGCTTGGGACGAAGATATTAAAAATCTCCTCTaGCTGCGATTGTATTCCAAAGATGGACAGCACCAC +
Preference number: 6 (lower is better)
Translates to: IFAWDEDIKNLL*LRLYSKDGQHH
Trigger: GTGGTGCTGTCCATCTTTGGAATACAATCGCAGGCAGAGGAGATTTTTAATATCTTCGTCCCAAGCAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000032128.6