Pregenerated sensors for GK5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041440Ensembl transcript IDs: ENSMUST00000085217.12, ENSMUST00000122383.3, ENSMUST00000129774.2
Found 258 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGACTTCACTGCATCGTCTGGACAGGCTCCAAGCTCAAGCTCCCCTaGCCGCAGCCTCGAAAGTCCCCATATTTGCCACCATGCCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: GLHCIVWTGSKLKLP*PQPRKSPYLPPCPA Trigger: GGCTGGGCATGGTGGCAAATATGGGGACTTTCGAGGCTGCGGCCAGGGGAGCTTGAGCTTGGAGCCTGTCCAGACGATGCAGTGAAGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
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| 3UTR CCA 90 bp | GGCCTCACTGTGTCACCCAGATTGCCTGGACTTCACTGCATCGTCTaGACAGGCTCCAAGCTCAAGCTCCCCTGGCCGCAGCCTCGAAAG | + |
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Preference number: 1 (lower is better) Translates to: GLTVSPRLPGLHCIV*TGSKLKLPWPQPRK Trigger: CTTTCGAGGCTGCGGCCAGGGGAGCTTGAGCTTGGAGCCTGTCCAGACGATGCAGTGAAGTCCAGGCAATCTGGGTGACACAGTGAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
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| 3UTR GCA 90 bp | CCAAGCTCAAGCTCCCCTGGCCGCAGCCTCGAAAGTCCCCATATTTaGCACCATGCCCAGCCTCAACATCCCTTTCAGTCCACTGAGATG | + |
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Preference number: 1 (lower is better) Translates to: PSSSSPGRSLESPHI*HHAQPQHPFQSTEM Trigger: CATCTCAGTGGACTGAAAGGGATGTTGAGGCTGGGCATGGTGGCAAATATGGGGACTTTCGAGGCTGCGGCCAGGGGAGCTTGAGCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
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| 3UTR GCA 90 bp | TTCCTTGTCCGCCCAAAATCCAACAGCGAGGCCAGCCAGAGAGGCTaGCCCCAAGCAGGACATGTCGAAGTGGGCAGGTCTGTCTATCTT | + |
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Preference number: 1 (lower is better) Translates to: FLVRPKSNSEASQRG*PQAGHVEVGRSVYL Trigger: AAGATAGACAGACCTGCCCACTTCGACATGTCCTGCTTGGGGGCAGCCTCTCTGGCTGGCCTCGCTGTTGGATTTTGGGCGGACAAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
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| 3UTR GCA 90 bp | TTTGCCACCATGCCCAGCCTCAACATCCCTTTCAGTCCACTGAGATaGGTTCCTCAATGTATGCTGAGTGCCCACCCAGGCACGATGGTG | + |
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Preference number: 1 (lower is better) Translates to: FATMPSLNIPFSPLR*VPQCMLSAHPGTMV Trigger: CACCATCGTGCCTGGGTGGGCACTCAGCATACATTGAGGAACGCATCTCAGTGGACTGAAAGGGATGTTGAGGCTGGGCATGGTGGCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
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| 3UTR TCA 90 bp | AGTGCCCACCCAGGCACGATGGTGCCCGCCTATAATCTTAGAATCTaGGAGATGAGGAAGAAGGTCATGTTTCAGGCTAGCCTGGGCTAC | + |
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Preference number: 1 (lower is better) Translates to: SAHPGTMVPAYNLRI*EMRKKVMFQASLGY Trigger: GTAGCCCAGGCTAGCCTGAAACATGACCTTCTTCCTCATCTCTCAGATTCTAAGATTATAGGCGGGCACCATCGTGCCTGGGTGGGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
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| 3UTR CCA 90 bp | CCACAGACAGGAAGGCACAGTGTTAAGTTCTGTGGGGAGCAAACGTaGCTTTGGCTTCAGGAAGCATCGAGTGAAGCTTTGGGACAGTGG | + |
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Preference number: 1 (lower is better) Translates to: PQTGRHSVKFCGEQT*LWLQEASSEALGQW Trigger: CCACTGTCCCAAAGCTTCACTCGATGCTTCCTGAAGCCAAAGCCACGTTTGCTCCCCACAGAACTTAACACTGTGCCTTCCTGTCTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
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| 3UTR GCA 90 bp | CCTCCATCTGCCCGGATGTTCGTGACGGGAATCTGGATTTCTCTCTaGAGCATGTCGTACAACTGTTTGTTCCTGAAAGCTATTGACTCC | + |
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Preference number: 1 (lower is better) Translates to: PPSARMFVTGIWISL*SMSYNCLFLKAIDS Trigger: GGAGTCAATAGCTTTCAGGAACAAACAGTTGTACGACATGCTGCAGAGAGAAATCCAGATTCCCGTCACGAACATCCGGGCAGATGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
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| 3UTR GCA 90 bp | TGGGCAGGTCTGTCTATCTTCTCATTTATCAGGTCTGAAGTCATCTaGATGACGAAAGCGTTGTTACACACGCCTCCATCTGCCCGGATG | + |
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Preference number: 1 (lower is better) Translates to: WAGLSIFSFIRSEVI*MTKALLHTPPSARM Trigger: CATCCGGGCAGATGGAGGCGTGTGTAACAACGCTTTCGTCATGCAGATGACTTCAGACCTGATAAATGAGAAGATAGACAGACCTGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
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| 3UTR TCA 90 bp | GTTCTGTGGGGAGCAAACGTGGCTTTGGCTTCAGGAAGCATCGAGTaGAGCTTTGGGACAGTGGTAGTCCTTTCCTTGTTCAGAGATAAA | + |
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Preference number: 1 (lower is better) Translates to: VLWGANVALASGSIE*SFGTVVVLSLFRDK Trigger: TTTATCTCTGAACAAGGAAAGGACTACCACTGTCCCAAAGCTTCACTCGATGCTTCCTGAAGCCAAAGCCACGTTTGCTCCCCACAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
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| 3UTR TCA 90 bp | CAGGTCTGTCTATCTTCTCATTTATCAGGTCTGAAGTCATCTGCATaGCGAAAGCGTTGTTACACACGCCTCCATCTGCCCGGATGTTCG | + |
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Preference number: 1 (lower is better) Translates to: QVCLSSHLSGLKSSA*RKRCYTRLHLPGCS Trigger: CGAACATCCGGGCAGATGGAGGCGTGTGTAACAACGCTTTCGTCATGCAGATGACTTCAGACCTGATAAATGAGAAGATAGACAGACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
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| 3UTR GCA 90 bp | AATACTGCCATGAGTTCCAGACCAACCTGGGCCCTGTCTCAGAAGTaGAGGGGTAGGAACAGATGGTCTACAGAATATAACCGTCATATC | + |
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Preference number: 1 (lower is better) Translates to: NTAMSSRPTWALSQK*RGRNRWSTEYNRHI Trigger: GATATGACGGTTATATTCTGTAGACCATCTGTTCCTACCCCTGCACTTCTGAGACAGGGCCCAGGTTGGTCTGGAACTCATGGCAGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
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| 3UTR CCA 90 bp | TTGTTACACACGCCTCCATCTGCCCGGATGTTCGTGACGGGAATCTaGATTTCTCTCTGCAGCATGTCGTACAACTGTTTGTTCCTGAAA | + |
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Preference number: 1 (lower is better) Translates to: LLHTPPSARMFVTGI*ISLCSMSYNCLFLK Trigger: TTTCAGGAACAAACAGTTGTACGACATGCTGCAGAGAGAAATCCAGATTCCCGTCACGAACATCCGGGCAGATGGAGGCGTGTGTAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
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| 3UTR TCA 90 bp | GCAGGGGTAGGAACAGATGGTCTACAGAATATAACCGTCATATCGTaGGGCCAAATGTCCACTAATTGTGAACACACAGGAGCAGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: AGVGTDGLQNITVIS*GQMSTNCEHTGAEL Trigger: CAGCTCTGCTCCTGTGTGTTCACAATTAGTGGACATTTGGCCTCACGATATGACGGTTATATTCTGTAGACCATCTGTTCCTACCCCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
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| 3UTR TCA 90 bp | CATGTCGAAGTGGGCAGGTCTGTCTATCTTCTCATTTATCAGGTCTaGAGTCATCTGCATGACGAAAGCGTTGTTACACACGCCTCCATC | + |
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Preference number: 1 (lower is better) Translates to: HVEVGRSVYLLIYQV*SHLHDESVVTHASI Trigger: GATGGAGGCGTGTGTAACAACGCTTTCGTCATGCAGATGACTTCAGACCTGATAAATGAGAAGATAGACAGACCTGCCCACTTCGACATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
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| 3UTR TCA 90 bp | AGTCCTCTTAAAATGCCTCGTATTCCTGCCACTTCTTCTGAGGCTTaGAAACCATCTCGCTTTGCCTCAGCTTCTGGAGCTCTTCCTTGT | + |
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Preference number: 1 (lower is better) Translates to: SPLKMPRIPATSSEA*KPSRFASASGALPC Trigger: ACAAGGAAGAGCTCCAGAAGCTGAGGCAAAGCGAGATGGTTTTCAAGCCTCAGAAGAAGTGGCAGGAATACGAGGCATTTTAAGAGGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
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| 3UTR GCA 90 bp | CTAATTTTTGAGCCCACATTATGGCGGTGCCCGTGTCTCCTGCATTaGCTTCAGCTAAACATACAAGTTCTTGCCCAATCTTCCATCCAA | + |
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Preference number: 1 (lower is better) Translates to: LIFEPTLWRCPCLLH*LQLNIQVLAQSSIQ Trigger: TTGGATGGAAGATTGGGCAAGAACTTGTATGTTTAGCTGAAGGCAATGCAGGAGACACGGGCACCGCCATAATGTGGGCTCAAAAATTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
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| 3UTR GCA 90 bp | GACAGGAACACTGTCCTTTCTGAGTTTGCTGGAGTCCTCTTAAAATaGCTCGTATTCCTGCCACTTCTTCTGAGGCTTGAAAACCATCTC | + |
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Preference number: 1 (lower is better) Translates to: DRNTVLSEFAGVLLK*LVFLPLLLRLENHL Trigger: GAGATGGTTTTCAAGCCTCAGAAGAAGTGGCAGGAATACGAGGCATTTTAAGAGGACTCCAGCAAACTCAGAAAGGACAGTGTTCCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
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| 3UTR TCA 90 bp | TGGCAGAAAGCACATGAAATAGTATTTAACATCACTGAATGCTGGTaGGAGAACATGGAGAGACTGGACCACTCACACAGGAATGGAGGG | + |
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Preference number: 1 (lower is better) Translates to: WQKAHEIVFNITECW*ENMERLDHSHRNGG Trigger: CCCTCCATTCCTGTGTGAGTGGTCCAGTCTCTCCATGTTCTCTCACCAGCATTCAGTGATGTTAAATACTATTTCATGTGCTTTCTGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
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| 3UTR TCA 90 bp | TGGTGCTGGCATTTGAATAATCCGTGGCGTAGGAAGAACCTTTCGTaGGCTTGTATAACAGCCAGGTATCAATCGTCCCAAAGCAACAAT | + |
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Preference number: 1 (lower is better) Translates to: WCWHLNNPWRRKNLS*ACITARYQSSQSNN Trigger: ATTGTTGCTTTGGGACGATTGATACCTGGCTGTTATACAAGCTCACGAAAGGTTCTTCCTACGCCACGGATTATTCAAATGCCAGCACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
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| 3UTR TCA 90 bp | GATAATGCAGTTAGTGCCACGTTAAGACAGGAACACTGTCCTTTCTaGGTTTGCTGGAGTCCTCTTAAAATGCCTCGTATTCCTGCCACT | + |
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Preference number: 1 (lower is better) Translates to: DNAVSATLRQEHCPF*VCWSPLKMPRIPAT Trigger: AGTGGCAGGAATACGAGGCATTTTAAGAGGACTCCAGCAAACTCAGAAAGGACAGTGTTCCTGTCTTAACGTGGCACTAACTGCATTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
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| 3UTR TCA 90 bp | TTGACTATCAGGCTCAAGGCTGTAGGTTTGATCCATCTTCAGAGGTaGTGGGTAAGGGACACAACCAACCAACACTTTTTCTTCATTACC | + |
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Preference number: 1 (lower is better) Translates to: LTIRLKAVGLIHLQR*WVRDTTNQHFFFIT Trigger: GGTAATGAAGAAAAAGTGTTGGTTGGTTGTGTCCCTTACCCATCACCTCTGAAGATGGATCAAACCTACAGCCTTGAGCCTGATAGTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
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| 3UTR TCA 90 bp | CAAGGCAACAACTGGTATAGGCACGCCAAATATCTTCTCATCCACTaGTCCAAAATTATAGCTGGTATCCTTCACAGGAGGCAGGATAGA | + |
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Preference number: 1 (lower is better) Translates to: QGNNWYRHAKYLLIH*SKIIAGILHRRQDR Trigger: TCTATCCTGCCTCCTGTGAAGGATACCAGCTATAATTTTGGATCAGTGGATGAGAAGATATTTGGCGTGCCTATACCAGTTGTTGCCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
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| 3UTR GCA 90 bp | TTTCACAGCATGAGCCTCACACTGTGTAATGAGCCCAGAAGTAAATaGCCTTCTGTTGGGCACACTGTAAGACAATGTTCAAGATGCTTT | + |
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Preference number: 1 (lower is better) Translates to: FHSMSLTLCNEPRSK*PSVGHTVRQCSRCF Trigger: AAAGCATCTTGAACATTGTCTTACAGTGTGCCCAACAGAAGGGCATTTACTTCTGGGCTCATTACACAGTGTGAGGCTCATGCTGTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
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| 3UTR GCA 90 bp | ACCTCAGATAGGTTTTGTAAAATCCAGGTCAATCTTAAGGTGGCATaGTGGGTGCTGAAATTGAAGCGGCTGACCGTTAGCATTACTTTA | + |
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Preference number: 1 (lower is better) Translates to: TSDRFCKIQVNLKVA*WVLKLKRLTVSITL Trigger: TAAAGTAATGCTAACGGTCAGCCGCTTCAATTTCAGCACCCAGCATGCCACCTTAAGATTGACCTGGATTTTACAAAACCTATCTGAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
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| 3UTR CCA 90 bp | GACTCACAAGTATCTGAAATGCAGTTAGAAGTGGACAGTGTCCTTTaGAAATCGCCAGAAGAAAGAAGACTCAATTTTGAGGTCTTGCTG | + |
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Preference number: 1 (lower is better) Translates to: DSQVSEMQLEVDSVL*KSPEERRLNFEVLL Trigger: CAGCAAGACCTCAAAATTGAGTCTTCTTTCTTCTGGCGATTTCCAAAGGACACTGTCCACTTCTAACTGCATTTCAGATACTTGTGAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
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| 3UTR CCA 90 bp | TCAGATAGGTTTTGTAAAATCCAGGTCAATCTTAAGGTGGCATGCTaGGTGCTGAAATTGAAGCGGCTGACCGTTAGCATTACTTTACTT | + |
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Preference number: 1 (lower is better) Translates to: SDRFCKIQVNLKVAC*VLKLKRLTVSITLL Trigger: AAGTAAAGTAATGCTAACGGTCAGCCGCTTCAATTTCAGCACCCAGCATGCCACCTTAAGATTGACCTGGATTTTACAAAACCTATCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
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| 3UTR GCA 90 bp | ATTGACTCCAATATTGCTCGGACAAGATGGTATTTATTAGTGGAGTaGTTCAAACCCATAAAAGAGGCACAGGCACAGGGGTCATTTAAT | + |
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Preference number: 1 (lower is better) Translates to: IDSNIARTRWYLLVE*FKPIKEAQAQGSFN Trigger: ATTAAATGACCCCTGTGCCTGTGCCTCTTTTATGGGTTTGAAGCACTCCACTAATAAATACCATCTTGTCCGAGCAATATTGGAGTCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
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| 3UTR CCA 90 bp | CTATATTCACCAAATCCTCATGTTTATTCTAACAGCCTGCATCAGTaGTTCTCAAATGACAATGATTTTTGCCTCCCAGGATGGCCAATG | + |
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Preference number: 1 (lower is better) Translates to: LYSPNPHVYSNSLHQ*FSNDNDFCLPGWPM Trigger: CATTGGCCATCCTGGGAGGCAAAAATCATTGTCATTTGAGAACCACTGATGCAGGCTGTTAGAATAAACATGAGGATTTGGTGAATATAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
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| 3UTR TCA 90 bp | CTAAGGAGGTCACTGAAGAGTGACGTCAGAGCTTATCTGAGGATATaGCACTTGACAATTATGGCTTTATATATAAAACGTCCTCTCAAC | + |
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Preference number: 1 (lower is better) Translates to: LRRSLKSDVRAYLRI*HLTIMALYIKRPLN Trigger: GTTGAGAGGACGTTTTATATATAAAGCCATAATTGTCAAGTGTCATATCCTCAGATAAGCTCTGACGTCACTCTTCAGTGACCTCCTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
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| 3UTR CCA 90 bp | CACACAACTCTAGAGACTAAAGTTGGGGGTTCAAGAGTTAGAAACTaGCATGGGCTAAACAGGATCTTCTCTCAAACAAATGAGATATTT | + |
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Preference number: 1 (lower is better) Translates to: HTTLETKVGGSRVRN*HGLNRIFSQTNEIF Trigger: AAATATCTCATTTGTTTGAGAGAAGATCCTGTTTAGCCCATGCCAGTTTCTAACTCTTGAACCCCCAACTTTAGTCTCTAGAGTTGTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
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| 3UTR CCA 90 bp | TGTTTGTTCCTGAAAGCTATTGACTCCAATATTGCTCGGACAAGATaGTATTTATTAGTGGAGTGCTTCAAACCCATAAAAGAGGCACAG | + |
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Preference number: 1 (lower is better) Translates to: CLFLKAIDSNIARTR*YLLVECFKPIKEAQ Trigger: CTGTGCCTCTTTTATGGGTTTGAAGCACTCCACTAATAAATACCATCTTGTCCGAGCAATATTGGAGTCAATAGCTTTCAGGAACAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
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| 3UTR GCA 90 bp | GAATGTGACTATATTCACCAAATCCTCATGTTTATTCTAACAGCCTaGATCAGTGGTTCTCAAATGACAATGATTTTTGCCTCCCAGGAT | + |
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Preference number: 1 (lower is better) Translates to: ECDYIHQILMFILTA*ISGSQMTMIFASQD Trigger: ATCCTGGGAGGCAAAAATCATTGTCATTTGAGAACCACTGATGCAGGCTGTTAGAATAAACATGAGGATTTGGTGAATATAGTCACATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
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| 3UTR TCA 90 bp | GAATTCATTTCCCAGGAGAAAACAGTGCATAGACTATTGGGAATGTaGCTATATTCACCAAATCCTCATGTTTATTCTAACAGCCTGCAT | + |
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Preference number: 1 (lower is better) Translates to: EFISQEKTVHRLLGM*LYSPNPHVYSNSLH Trigger: ATGCAGGCTGTTAGAATAAACATGAGGATTTGGTGAATATAGTCACATTCCCAATAGTCTATGCACTGTTTTCTCCTGGGAAATGAATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
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| 3UTR GCA 90 bp | CTCTACTTTTTCACTGTTAAGAATTCATTTCCCAGGAGAAAACAGTaGATAGACTATTGGGAATGTGACTATATTCACCAAATCCTCATG | + |
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Preference number: 1 (lower is better) Translates to: LYFFTVKNSFPRRKQ*IDYWECDYIHQILM Trigger: CATGAGGATTTGGTGAATATAGTCACATTCCCAATAGTCTATGCACTGTTTTCTCCTGGGAAATGAATTCTTAACAGTGAAAAAGTAGAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
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| 3UTR CAA 90 bp | GGCTTGAAAACCATCTCGCTTTGCCTCAGCTTCTGGAGCTCTTCCTaGTCCGCCCAAAATCCAACAGCGAGGCCAGCCAGAGAGGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: GLKTISLCLSFWSSS*SAQNPTARPAREAA Trigger: GGCAGCCTCTCTGGCTGGCCTCGCTGTTGGATTTTGGGCGGACAAGGAAGAGCTCCAGAAGCTGAGGCAAAGCGAGATGGTTTTCAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTGGACTTCACTGCATCGTCTGGACAGGCTCCAAGCTCAAGCTCCCCTGGCCGAAAGTCCCCATATTTaGCACCATGCCCAGCCTCAA | + |
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Preference number: 2 (lower is better) Translates to: AWTSLHRLDRLQAQAPLAESPHI*HHAQPQ Trigger: TTGAGGCTGGGCATGGTGGCAAATATGGGGACTTTC...GGCCAGGGGAGCTTGAGCTTGGAGCCTGTCCAGACGATGCAGTGAAGTCCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
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| 3UTR-3UTR GCA 90 bp | TGGCCGCAGCCTCGAAAGTCCCCATATTTGCCACCATGCCCAGCCTCAACATCCTCAATGTATGCTGAGTaGCCACCCAGGCACGATGGT | + |
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Preference number: 2 (lower is better) Translates to: WPQPRKSPYLPPCPASTSSMYAE*PPRHDG Trigger: ACCATCGTGCCTGGGTGGGCACTCAGCATACATTGA...GGATGTTGAGGCTGGGCATGGTGGCAAATATGGGGACTTTCGAGGCTGCGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
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| 3UTR-3UTR GCA 90 bp | TCACTGCATCGTCTGGACAGGCTCCAAGCTCAAGCTCCCCTGGCCGCAGCCTCGTTCAGTCCACTGAGATaGGTTCCTCAATGTATGCTG | + |
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Preference number: 2 (lower is better) Translates to: SLHRLDRLQAQAPLAAASFSPLR*VPQCML Trigger: CAGCATACATTGAGGAACGCATCTCAGTGGACTGAA...CGAGGCTGCGGCCAGGGGAGCTTGAGCTTGGAGCCTGTCCAGACGATGCAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
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| 3UTR-3UTR GCA 90 bp | TCAGCACCCAGGAGGCTGAGGCAGGAATACTGCCATGAGTTCCAGACCAACCTGGCCCTGTCTCAGAAGTaGAGGGGTAGGAACAGATGG | + |
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Preference number: 2 (lower is better) Translates to: SAPRRLRQEYCHEFQTNLALSQK*RGRNRW Trigger: CCATCTGTTCCTACCCCTGCACTTCTGAGACAGGGC...CAGGTTGGTCTGGAACTCATGGCAGTATTCCTGCCTCAGCCTCCTGGGTGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
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| 3UTR-3UTR GCA 90 bp | GACGAAAGCGTTGTTACACACGCCTCCATCTGCCCGGATGTTCGTGACGGGAATCCCACATTATGGCGGTaGCCGTGTCTCCTGCATTGC | + |
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Preference number: 2 (lower is better) Translates to: DESVVTHASICPDVRDGNPTLWR*PCLLHC Trigger: GCAATGCAGGAGACACGGGCACCGCCATAATGTGGG...ATTCCCGTCACGAACATCCGGGCAGATGGAGGCGTGTGTAACAACGCTTTCGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGTGCACACCTTTAACCCCAGAACTCAGGAGGCAGAGGCAGGCGGAGTTCTGATCCATCTTCAGAGGTaGTGGGTAAGGGACACAACC | + |
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Preference number: 2 (lower is better) Translates to: VVHTFNPRTQEAEAGGVLIHLQR*WVRDTT Trigger: GGTTGTGTCCCTTACCCATCACCTCTGAAGATGGAT...CAGAACTCCGCCTGCCTCTGCCTCCTGAGTTCTGGGGTTAAAGGTGTGCACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
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| 3UTR-3UTR GCA 90 bp | CATATTTGCCACCATGCCCAGCCTCAACATCCCTTTCAGTCCACTGAGATGCGTTCCTGTCCCCCGGCCTaGAGGTTTTCCTTGGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: HICHHAQPQHPFQSTEMRSCPPA*RFSLAP Trigger: AGGAGCCAAGGAAAACCTGCAGGCCGGGGGACAGGA...ACGCATCTCAGTGGACTGAAAGGGATGTTGAGGCTGGGCATGGTGGCAAATATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
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| 3UTR-3UTR GCA 90 bp | GCCTGGACTTCACTGCATCGTCTGGACAGGCTCCAAGCTCAAGCTCCCCTGGCCAAACAGCTCAGGTTGTaGAGAAGAATTAAGGCCGTG | + |
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Preference number: 2 (lower is better) Translates to: AWTSLHRLDRLQAQAPLAKQLRL*RRIKAV Trigger: CACGGCCTTAATTCTTCTGCACAACCTGAGCTGTTT...GGCCAGGGGAGCTTGAGCTTGGAGCCTGTCCAGACGATGCAGTGAAGTCCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
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| 3UTR-3UTR GCA 90 bp | GTGGTGCACACCTTTAACCCCAGAACTCAGGAGGCAGAGGCAGGCGGAGTTCTGCTGAGGCAGGAATACTaGCATGAGTTCCAGACCAAC | + |
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Preference number: 2 (lower is better) Translates to: VVHTFNPRTQEAEAGGVLLRQEY*HEFQTN Trigger: GTTGGTCTGGAACTCATGGCAGTATTCCTGCCTCAG...CAGAACTCCGCCTGCCTCTGCCTCCTGAGTTCTGGGGTTAAAGGTGTGCACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTGGACTTCACTGCATCGTCTGGACAGGCTCCAAGCTCAAGCTCCCCTGGCCGGACTCACAAGTATCTaGAATGCAGTTAGAAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: AWTSLHRLDRLQAQAPLAGLTSI*NAVRSG Trigger: TCCACTTCTAACTGCATTTCAGATACTTGTGAGTCC...GGCCAGGGGAGCTTGAGCTTGGAGCCTGTCCAGACGATGCAGTGAAGTCCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| 3UTR-3UTR TCA 90 bp | GTGTTAAGTTCTGTGGGGAGCAAACGTGGCTTTGGCTTCAGGAAGCATCGAGTGGCAGGCGGAGTTCTGTaGATGAGGAGGCAACCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: VLSSVGSKRGFGFRKHRVAGGVL*MRRQPG Trigger: ACCAGGTTGCCTCCTCATTCACAGAACTCCGCCTGC...CACTCGATGCTTCCTGAAGCCAAAGCCACGTTTGCTCCCCACAGAACTTAACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
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| 3UTR-3UTR TCA 90 bp | GCCTGGACTTCACTGCATCGTCTGGACAGGCTCCAAGCTCAAGCTCCCCTGGCCGCTTATCTGAGGATATaGCACTTGACAATTATGGCT | + |
|
Preference number: 2 (lower is better) Translates to: AWTSLHRLDRLQAQAPLAAYLRI*HLTIMA Trigger: AGCCATAATTGTCAAGTGTCATATCCTCAGATAAGC...GGCCAGGGGAGCTTGAGCTTGGAGCCTGTCCAGACGATGCAGTGAAGTCCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
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| 3UTR-3UTR CCA 90 bp | TCAGCACCCAGGAGGCTGAGGCAGGAATACTGCCATGAGTTCCAGACCAACCTGCAATGTTGCAAGGTGTaGTGGTGCACACCTTTAACC | + |
|
Preference number: 2 (lower is better) Translates to: SAPRRLRQEYCHEFQTNLQCCKV*WCTPLT Trigger: GGTTAAAGGTGTGCACCACCACACCTTGCAACATTG...CAGGTTGGTCTGGAACTCATGGCAGTATTCCTGCCTCAGCCTCCTGGGTGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCATCTCGCTTTGCCTCAGCTTCTGGAGCTCTTCCTTGTCCGCCCAAAATCCACAGGATGGCCAATGTTaGCAGGCATTTGGGGCCATA | + |
|
Preference number: 2 (lower is better) Translates to: TISLCLSFWSSSLSAQNPQDGQC*QAFGAI Trigger: TATGGCCCCAAATGCCTGCCAACATTGGCCATCCTG...TGGATTTTGGGCGGACAAGGAAGAGCTCCAGAAGCTGAGGCAAAGCGAGATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTCAATGTTGCAAGGTGTGGTGGTGCACACCTTTAACCCCAGAACTCAGGAGGTGGGCATGCTTAGCATaGACCAGACTCTGGGGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: CQCCKVWWCTPLTPELRRWACLA*TRLWGE Trigger: TTCACCCCAGAGTCTGGTGCATGCTAAGCATGCCCA...CCTCCTGAGTTCTGGGGTTAAAGGTGTGCACCACCACACCTTGCAACATTGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| 3UTR-3UTR CCA 90 bp | GACGAAAGCGTTGTTACACACGCCTCCATCTGCCCGGATGTTCGTGACGGGAATCAATGTTGCAAGGTGTaGTGGTGCACACCTTTAACC | + |
|
Preference number: 2 (lower is better) Translates to: DESVVTHASICPDVRDGNQCCKV*WCTPLT Trigger: GGTTAAAGGTGTGCACCACCACACCTTGCAACATTG...ATTCCCGTCACGAACATCCGGGCAGATGGAGGCGTGTGTAACAACGCTTTCGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCAATGTTGCAAGGTGTGGTGGTGCACACCTTTAACCCCAGAACTCAGGAGGATGTTGGCAGGCATTTaGGGCCATAAAACCCAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: CQCCKVWWCTPLTPELRRMLAGI*GHKTQG Trigger: CCCCTGGGTTTTATGGCCCCAAATGCCTGCCAACAT...CCTCCTGAGTTCTGGGGTTAAAGGTGTGCACCACCACACCTTGCAACATTGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCAATGTTGCAAGGTGTGGTGGTGCACACCTTTAACCCCAGAACTCAGGAGGAGGCAGGATAGACAGTaGGATGGAGACCATGGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: CQCCKVWWCTPLTPELRRRQDRQ*DGDHGG Trigger: ACCACCATGGTCTCCATCCCACTGTCTATCCTGCCT...CCTCCTGAGTTCTGGGGTTAAAGGTGTGCACCACCACACCTTGCAACATTGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
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| 3UTR CAA 90 bp | CTCGTATTCCTGCCACTTCTTCTGAGGCTTGAAAACCATCTCGCTTaGCCTCAGCTTCTGGAGCTCTTCCTTGTCCGCCCAAAATCCAAC | + |
|
Preference number: 2 (lower is better) Translates to: LVFLPLLLRLENHLA*PQLLELFLVRPKSN Trigger: GTTGGATTTTGGGCGGACAAGGAAGAGCTCCAGAAGCTGAGGCAAAGCGAGATGGTTTTCAAGCCTCAGAAGAAGTGGCAGGAATACGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGGGATACTGCCAAGCATCCCACTGTGTCCAGCATAGCATCCCAAAGCAAAGTCTGAGGCAGGAATACTaGCATGAGTTCCAGACCAAC | + |
|
Preference number: 2 (lower is better) Translates to: QGYCQASHCVQHSIPKQSLRQEY*HEFQTN Trigger: GTTGGTCTGGAACTCATGGCAGTATTCCTGCCTCAG...ACTTTGCTTTGGGATGCTATGCTGGACACAGTGGGATGCTTGGCAGTATCCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGGGACACAACCAACCAACACTTTTTCTTCATTACCGAGCAAAACCGAAACCGGCAGGCGGAGTTCTGTaGATGAGGAGGCAACCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: KGHNQPTLFLHYRAKPKPAGGVL*MRRQPG Trigger: ACCAGGTTGCCTCCTCATTCACAGAACTCCGCCTGC...CGGTTTCGGTTTTGCTCGGTAATGAAGAAAAAGTGTTGGTTGGTTGTGTCCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTCAATGTTGCAAGGTGTGGTGGTGCACACCTTTAACCCCAGAACTCAGGAGGAGTGGCTCTCTGTGTTaGTATGCCAAGACCGACAAT | + |
|
Preference number: 2 (lower is better) Translates to: CQCCKVWWCTPLTPELRRSGSLC*YAKTDN Trigger: ATTGTCGGTCTTGGCATATCAACACAGAGAGCCACT...CCTCCTGAGTTCTGGGGTTAAAGGTGTGCACCACCACACCTTGCAACATTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTGTAGGTTTGATCCATCTTCAGAGGTGATGGGTAAGGGACACAACCAACCATCCTGCCACTTCTTCTaGGGCTTGAAAACCATCTCG | + |
|
Preference number: 2 (lower is better) Translates to: GCRFDPSSEVMGKGHNQPSCHFF*GLKTIS Trigger: CGAGATGGTTTTCAAGCCTCAGAAGAAGTGGCAGGA...TGGTTGGTTGTGTCCCTTACCCATCACCTCTGAAGATGGATCAAACCTACAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTCAATGTTGCAAGGTGTGGTGGTGCACACCTTTAACCCCAGAACTCAGGAGGGAACACTGTCCTTTCTaGGTTTGCTGGAGTCCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: CQCCKVWWCTPLTPELRREHCPF*VCWSPL Trigger: AAGAGGACTCCAGCAAACTCAGAAAGGACAGTGTTC...CCTCCTGAGTTCTGGGGTTAAAGGTGTGCACCACCACACCTTGCAACATTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
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| 3UTR-3UTR GCA 90 bp | TACTGCCAAGCATCCCACTGTGTCCAGCATAGCATCCCAAAGCAAAGTCAGATGTGCAAGGTGTGGTGGTaGACACCTTTAACCCCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: YCQASHCVQHSIPKQSQMCKVWW*TPLTPE Trigger: TTCTGGGGTTAAAGGTGTGCACCACCACACCTTGCA...CATCTGACTTTGCTTTGGGATGCTATGCTGGACACAGTGGGATGCTTGGCAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGCTGAGGTACATAAGTACTACAAGAGACTTACGGGATGGGATGTAGCTCAGGCCCTGTCTCAGAAGTaGAGGGGTAGGAACAGATGG | + |
|
Preference number: 2 (lower is better) Translates to: RAEVHKYYKRLTGWDVAQALSQK*RGRNRW Trigger: CCATCTGTTCCTACCCCTGCACTTCTGAGACAGGGC...CTGAGCTACATCCCATCCCGTAAGTCTCTTGTAGTACTTATGTACCTCAGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGCAGTTCAAAATGTCAATGTTGCAAGGTGTGGTGGTGCACACCTTTAACCCCGCATGCACCAGACTCTaGGGTGAATTCCCAGACCAG | + |
|
Preference number: 2 (lower is better) Translates to: MQFKMSMLQGVVVHTFNPACTRL*GEFPDQ Trigger: CTGGTCTGGGAATTCACCCCAGAGTCTGGTGCATGC...GGGGTTAAAGGTGTGCACCACCACACCTTGCAACATTGACATTTTGAACTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
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| 3UTR CAA 90 bp | ATCTTCTCATTTATCAGGTCTGAAGTCATCTGCATGACGAAAGCGTaGTTACACACGCCTCCATCTGCCCGGATGTTCGTGACGGGAATC | + |
|
Preference number: 2 (lower is better) Translates to: IFSFIRSEVICMTKA*LHTPPSARMFVTGI Trigger: GATTCCCGTCACGAACATCCGGGCAGATGGAGGCGTGTGTAACAACGCTTTCGTCATGCAGATGACTTCAGACCTGATAAATGAGAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTGGTTCTCAAATGACAATGATTTTTGCCTCCCAGGATGGCCAATGTTGGCACAGGATGGCCAATGTTaGCAGGCATTTGGGGCCATA | + |
|
Preference number: 2 (lower is better) Translates to: QWFSNDNDFCLPGWPMLAQDGQC*QAFGAI Trigger: TATGGCCCCAAATGCCTGCCAACATTGGCCATCCTG...TGCCAACATTGGCCATCCTGGGAGGCAAAAATCATTGTCATTTGAGAACCACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
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| 3UTR-3UTR TCA 90 bp | AAATGTCAATGTTGCAAGGTGTGGTGGTGCACACCTTTAACCCCAGAACTCAGGGCCAGGGCTACACATTaGGACCCTGTCATAAAAACA | + |
|
Preference number: 2 (lower is better) Translates to: KCQCCKVWWCTPLTPELRARATH*DPVIKT Trigger: TGTTTTTATGACAGGGTCTCAATGTGTAGCCCTGGC...CCTGAGTTCTGGGGTTAAAGGTGTGCACCACCACACCTTGCAACATTGACATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTTAAGTTCTGTGGGGAGCAAACGTGGCTTTGGCTTCAGGAAGCATCGAGTGTCAAAATGTCAATGTTaGAAGGTGTGGTGGTGCACA | + |
|
Preference number: 2 (lower is better) Translates to: VLSSVGSKRGFGFRKHRVSKCQC*KVWWCT Trigger: TGTGCACCACCACACCTTGCAACATTGACATTTTGA...CACTCGATGCTTCCTGAAGCCAAAGCCACGTTTGCTCCCCACAGAACTTAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
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| 3UTR-3UTR GCA 90 bp | AGAGCTGAGGTACATAAGTACTACAAGAGACTTACGGGATGGGATGTAGCTCAGCAAAGTAGCTGGGCATaGTTAGCATGCACCAGACTC | + |
|
Preference number: 2 (lower is better) Translates to: RAEVHKYYKRLTGWDVAQQSSWA*LACTRL Trigger: GAGTCTGGTGCATGCTAAGCATGCCCAGCTACTTTG...CTGAGCTACATCCCATCCCGTAAGTCTCTTGTAGTACTTATGTACCTCAGCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
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| 3UTR-3UTR TCA 90 bp | GGAATAGTTGACTATCAGGCTCAAGGCTGTAGGTTTGATCCATCTTCAGAGGTGGCCAGGGCTACACATTaGGACCCTGTCATAAAAACA | + |
|
Preference number: 2 (lower is better) Translates to: GIVDYQAQGCRFDPSSEVARATH*DPVIKT Trigger: TGTTTTTATGACAGGGTCTCAATGTGTAGCCCTGGC...CACCTCTGAAGATGGATCAAACCTACAGCCTTGAGCCTGATAGTCAACTATTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCAATGTTGCAAGGTGTGGTGGTGCACACCTTTAACCCCAGAACTCAGGAGGAACAGCCTGCATCAGTaGTTCTCAAATGACAATGAT | + |
|
Preference number: 2 (lower is better) Translates to: CQCCKVWWCTPLTPELRRNSLHQ*FSNDND Trigger: ATCATTGTCATTTGAGAACCACTGATGCAGGCTGTT...CCTCCTGAGTTCTGGGGTTAAAGGTGTGCACCACCACACCTTGCAACATTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGGACACAACCAACCAACACTTTTTCTTCATTACCGAGCAAAACCGAAACCGGAGCAAACGTGGCTTTaGCTTCAGGAAGCATCGAGT | + |
|
Preference number: 2 (lower is better) Translates to: KGHNQPTLFLHYRAKPKPEQTWL*LQEASS Trigger: ACTCGATGCTTCCTGAAGCCAAAGCCACGTTTGCTC...CGGTTTCGGTTTTGCTCGGTAATGAAGAAAAAGTGTTGGTTGGTTGTGTCCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
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| 3UTR-3UTR CCA 90 bp | ATGCAGTTCAAAATGTCAATGTTGCAAGGTGTGGTGGTGCACACCTTTAACCCCGAAGTTCAAAGTAGCTaGGCATGCTTAGCATGCACC | + |
|
Preference number: 2 (lower is better) Translates to: MQFKMSMLQGVVVHTFNPEVQSS*ACLACT Trigger: GGTGCATGCTAAGCATGCCCAGCTACTTTGAACTTC...GGGGTTAAAGGTGTGCACCACCACACCTTGCAACATTGACATTTTGAACTGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
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| 3UTR-3UTR CCA 90 bp | GGCTGTAGGTTTGATCCATCTTCAGAGGTGATGGGTAAGGGACACAACCAACCAAAAATCCAGTGGTGCTaGCATTTGAATAATCCGTGG | + |
|
Preference number: 2 (lower is better) Translates to: GCRFDPSSEVMGKGHNQPKIQWC*HLNNPW Trigger: CCACGGATTATTCAAATGCCAGCACCACTGGATTTT...TGGTTGGTTGTGTCCCTTACCCATCACCTCTGAAGATGGATCAAACCTACAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCAATGTTGCAAGGTGTGGTGGTGCACACCTTTAACCCCAGAACTCAGGAGGATCCAAAATTATAGCTaGTATCCTTCACAGGAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: CQCCKVWWCTPLTPELRRIQNYS*YPSQEA Trigger: TGCCTCCTGTGAAGGATACCAGCTATAATTTTGGAT...CCTCCTGAGTTCTGGGGTTAAAGGTGTGCACCACCACACCTTGCAACATTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGCTGAGGTACATAAGTACTACAAGAGACTTACGGGATGGGATGTAGCTCAGTTCGTGACGGGAATCTaGATTTCTCTCTGCAGCATG | + |
|
Preference number: 2 (lower is better) Translates to: RAEVHKYYKRLTGWDVAQFVTGI*ISLCSM Trigger: CATGCTGCAGAGAGAAATCCAGATTCCCGTCACGAA...CTGAGCTACATCCCATCCCGTAAGTCTCTTGTAGTACTTATGTACCTCAGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGGACACAACCAACCAACACTTTTTCTTCATTACCGAGCAAAACCGAAACCGCAGGACATGTCGAAGTaGGCAGGTCTGTCTATCTTC | + |
|
Preference number: 2 (lower is better) Translates to: KGHNQPTLFLHYRAKPKPQDMSK*AGLSIF Trigger: GAAGATAGACAGACCTGCCCACTTCGACATGTCCTG...CGGTTTCGGTTTTGCTCGGTAATGAAGAAAAAGTGTTGGTTGGTTGTGTCCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
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| 3UTR CAA 90 bp | GTGACGGGAATCTGGATTTCTCTCTGCAGCATGTCGTACAACTGTTaGTTCCTGAAAGCTATTGACTCCAATATTGCTCGGACAAGATGG | + |
|
Preference number: 2 (lower is better) Translates to: VTGIWISLCSMSYNC*FLKAIDSNIARTRW Trigger: CCATCTTGTCCGAGCAATATTGGAGTCAATAGCTTTCAGGAACAAACAGTTGTACGACATGCTGCAGAGAGAAATCCAGATTCCCGTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
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| 3UTR-3UTR GCA 90 bp | ACCATCTCGCTTTGCCTCAGCTTCTGGAGCTCTTCCTTGTCCGCCCAAAATCCAAAACATACAAGTTCTTaGCCAATCTTCCATCCAATT | + |
|
Preference number: 2 (lower is better) Translates to: TISLCLSFWSSSLSAQNPKHTSS*PIFHPI Trigger: AATTGGATGGAAGATTGGGCAAGAACTTGTATGTTT...TGGATTTTGGGCGGACAAGGAAGAGCTCCAGAAGCTGAGGCAAAGCGAGATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
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| 3UTR-3UTR GCA 90 bp | ATGCAGTTCAAAATGTCAATGTTGCAAGGTGTGGTGGTGCACACCTTTAACCCCCCGTGTCTCCTGCATTaGCTTCAGCTAAACATACAA | + |
|
Preference number: 2 (lower is better) Translates to: MQFKMSMLQGVVVHTFNPPCLLH*LQLNIQ Trigger: TTGTATGTTTAGCTGAAGGCAATGCAGGAGACACGG...GGGGTTAAAGGTGTGCACCACCACACCTTGCAACATTGACATTTTGAACTGCAT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGGGATACTGCCAAGCATCCCACTGTGTCCAGCATAGCATCCCAAAGCAAAGTCAGTGCATAGACTATTaGGAATGTGACTATATTCAC | + |
|
Preference number: 2 (lower is better) Translates to: QGYCQASHCVQHSIPKQSQCIDY*ECDYIH Trigger: GTGAATATAGTCACATTCCCAATAGTCTATGCACTG...ACTTTGCTTTGGGATGCTATGCTGGACACAGTGGGATGCTTGGCAGTATCCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAGCTGAGGTACATAAGTACTACAAGAGACTTACGGGATGGGATGTAGCTCAGATAGCACCAAAGTGTTaGGCACAACACAAGGCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: RAEVHKYYKRLTGWDVAQIAPKC*AQHKAS Trigger: ACTAGCCTTGTGTTGTGCCCAACACTTTGGTGCTAT...CTGAGCTACATCCCATCCCGTAAGTCTCTTGTAGTACTTATGTACCTCAGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| 3UTR-3UTR GCA 90 bp | TGTCAATGTTGCAAGGTGTGGTGGTGCACACCTTTAACCCCAGAACTCAGGAGGCAAAGCAAAGTCAGATaGAGTTCAAAATGTCAATGT | + |
|
Preference number: 2 (lower is better) Translates to: CQCCKVWWCTPLTPELRRQSKVR*SSKCQC Trigger: ACATTGACATTTTGAACTGCATCTGACTTTGCTTTG...CCTCCTGAGTTCTGGGGTTAAAGGTGTGCACCACCACACCTTGCAACATTGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
||
| 3UTR-3UTR GCA 90 bp | TACTGCCAAGCATCCCACTGTGTCCAGCATAGCATCCCAAAGCAAAGTCAGATGTTTATTCTAACAGCCTaGATCAGTGGTTCTCAAATG | + |
|
Preference number: 2 (lower is better) Translates to: YCQASHCVQHSIPKQSQMFILTA*ISGSQM Trigger: CATTTGAGAACCACTGATGCAGGCTGTTAGAATAAA...CATCTGACTTTGCTTTGGGATGCTATGCTGGACACAGTGGGATGCTTGGCAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
||
| 3UTR-3UTR GCA 90 bp | GGCTGTAGGTTTGATCCATCTTCAGAGGTGATGGGTAAGGGACACAACCAACCATTTATTCTAACAGCCTaGATCAGTGGTTCTCAAATG | + |
|
Preference number: 2 (lower is better) Translates to: GCRFDPSSEVMGKGHNQPFILTA*ISGSQM Trigger: CATTTGAGAACCACTGATGCAGGCTGTTAGAATAAA...TGGTTGGTTGTGTCCCTTACCCATCACCTCTGAAGATGGATCAAACCTACAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTCTGAGGCATAGCAATTATTTCTATGAACTGAAAAAGTCTTGCCAGCCTCTTATGTTGGCAGGCATTTaGGGCCATAAAACCCAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: TLRHSNYFYELKKSCQPLMLAGI*GHKTQG Trigger: CCCCTGGGTTTTATGGCCCCAAATGCCTGCCAACAT...AAGAGGCTGGCAAGACTTTTTCAGTTCATAGAAATAATTGCTATGCCTCAGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| 3UTR-3UTR TCA 90 bp | ACTCTGAGGCATAGCAATTATTTCTATGAACTGAAAAAGTCTTGCCAGCCTCTTATCCATCTTCAGAGGTaGTGGGTAAGGGACACAACC | + |
|
Preference number: 2 (lower is better) Translates to: TLRHSNYFYELKKSCQPLIHLQR*WVRDTT Trigger: GGTTGTGTCCCTTACCCATCACCTCTGAAGATGGAT...AAGAGGCTGGCAAGACTTTTTCAGTTCATAGAAATAATTGCTATGCCTCAGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| 3UTR-3UTR TCA 90 bp | TTCAAAATGTCAATGTTGCAAGGTGTGGTGGTGCACACCTTTAACCCCAGAACTCTCATTTATCAGGTCTaGAGTCATCTGCATGACGAA | + |
|
Preference number: 2 (lower is better) Translates to: FKMSMLQGVVVHTFNPRTLIYQV*SHLHDE Trigger: TTCGTCATGCAGATGACTTCAGACCTGATAAATGAG...AGTTCTGGGGTTAAAGGTGTGCACCACCACACCTTGCAACATTGACATTTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR-3UTR GCA 90 bp | ACTCTAGAGACTAAAGTTGGGGGTTCAAGAGTTAGAAACTGGCATGGGCTAAACCTTCTTCTTTCAGCCTaGAAGGCTTGTTTCGAATCT | + |
|
Preference number: 2 (lower is better) Translates to: TLETKVGGSRVRNWHGLNLLLSA*KACFES Trigger: AGATTCGAAACAAGCCTTGCAGGCTGAAAGAAGAAG...GTTTAGCCCATGCCAGTTTCTAACTCTTGAACCCCCAACTTTAGTCTCTAGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| 3UTR-3UTR GCA 90 bp | ATGCAGTTCAAAATGTCAATGTTGCAAGGTGTGGTGGTGCACACCTTTAACCCCCTCTCTGTGTTGATATaGCAAGACCGACAATTTGAT | + |
|
Preference number: 2 (lower is better) Translates to: MQFKMSMLQGVVVHTFNPLSVLI*QDRQFD Trigger: ATCAAATTGTCGGTCTTGGCATATCAACACAGAGAG...GGGGTTAAAGGTGTGCACCACCACACCTTGCAACATTGACATTTTGAACTGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR-3UTR GCA 90 bp | ATATCTTCTCATCCACTGATCCAAAATTATAGCTGGTATCCTTCACAGGAGGCAACTCGGGTGGCCCCATaGAATAGCTTCATTATGAGA | + |
|
Preference number: 2 (lower is better) Translates to: ISSHPLIQNYSWYPSQEATRVAP*NSFIMR Trigger: TCTCATAATGAAGCTATTGCATGGGGCCACCCGAGT...TGCCTCCTGTGAAGGATACCAGCTATAATTTTGGATCAGTGGATGAGAAGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTCCTGCATTGCCTTCAGCTAAACATACAAGTTCTTGCCCAATCTTCCATCCATTTGAATAATCCGTaGCGTAGGAAGAACCTTTCG | + |
|
Preference number: 2 (lower is better) Translates to: CLLHCLQLNIQVLAQSSIHLNNP*RRKNLS Trigger: CGAAAGGTTCTTCCTACGCCACGGATTATTCAAATG...GATGGAAGATTGGGCAAGAACTTGTATGTTTAGCTGAAGGCAATGCAGGAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGGGACACAACCAACCAACACTTTTTCTTCATTACCGAGCAAAACCGAAACCGAACCAAGGCAACAACTaGTATAGGCACGCCAAATAT | + |
|
Preference number: 2 (lower is better) Translates to: KGHNQPTLFLHYRAKPKPNQGNN*YRHAKY Trigger: ATATTTGGCGTGCCTATACCAGTTGTTGCCTTGGTT...CGGTTTCGGTTTTGCTCGGTAATGAAGAAAAAGTGTTGGTTGGTTGTGTCCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGTCGTACAACTGTTTGTTCCTGAAAGCTATTGACTCCAATATTGCTCGGACAATGTTCCAGTTCCCATaGTTAGCTTCACATCTCCCG | + |
|
Preference number: 2 (lower is better) Translates to: MSYNCLFLKAIDSNIARTMFQFP*LASHLP Trigger: CGGGAGATGTGAAGCTAACCATGGGAACTGGAACAT...TGTCCGAGCAATATTGGAGTCAATAGCTTTCAGGAACAAACAGTTGTACGACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR CAA 90 bp | TGTAAAATCCAGGTCAATCTTAAGGTGGCATGCTGGGTGCTGAAATaGAAGCGGCTGACCGTTAGCATTACTTTACTTCTACTGAAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: CKIQVNLKVACWVLK*KRLTVSITLLLLKK Trigger: TTTCTTCAGTAGAAGTAAAGTAATGCTAACGGTCAGCCGCTTCAATTTCAGCACCCAGCATGCCACCTTAAGATTGACCTGGATTTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTGCTGGAGTCCTCTTAAAATGCCTCGTATTCCTGCCACTTCTTCTGAGGCTTCAGTGCATAGACTATTaGGAATGTGACTATATTCAC | + |
|
Preference number: 2 (lower is better) Translates to: FAGVLLKCLVFLPLLLRLQCIDY*ECDYIH Trigger: GTGAATATAGTCACATTCCCAATAGTCTATGCACTG...AAGCCTCAGAAGAAGTGGCAGGAATACGAGGCATTTTAAGAGGACTCCAGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR CAA 90 bp | CACACACACAACACAAAGAAACTGGTCCCTGGTATAGATAGGTGTTaGCTTAATGAAGAGGCTACTTATGAGGTTTCTTCTATAGCACCA | + |
|
Preference number: 2 (lower is better) Translates to: HTHNTKKLVPGIDRC*LNEEATYEVSSIAP Trigger: TGGTGCTATAGAAGAAACCTCATAAGTAGCCTCTTCATTAAGCAAACACCTATCTATACCAGGGACCAGTTTCTTTGTGTTGTGTGTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| 3UTR CAA 90 bp | GTGAGCTTGTATAACAGCCAGGTATCAATCGTCCCAAAGCAACAATaGTCTTCTTCAACTGCCCTTTTCACCTCAGATAGGTTTTGTAAA | + |
|
Preference number: 2 (lower is better) Translates to: VSLYNSQVSIVPKQQ*SSSTALFTSDRFCK Trigger: TTTACAAAACCTATCTGAGGTGAAAAGGGCAGTTGAAGAAGACAATTGTTGCTTTGGGACGATTGATACCTGGCTGTTATACAAGCTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR-3UTR TCA 90 bp | ACTCTAGAGACTAAAGTTGGGGGTTCAAGAGTTAGAAACTGGCATGGGCTAAACTATAATCTTAGAATCTaGGAGATGAGGAAGAAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: TLETKVGGSRVRNWHGLNYNLRI*EMRKKV Trigger: GACCTTCTTCCTCATCTCTCAGATTCTAAGATTATA...GTTTAGCCCATGCCAGTTTCTAACTCTTGAACCCCCAACTTTAGTCTCTAGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| 3UTR-3UTR TCA 90 bp | TTTGGGACAGTGGTAGTCCTTTCCTTGTTCAGAGATAAAACTGAAGCAAAGCCATTACTTTACTTCTACTaGAGAAATGAAGGACTCGGG | + |
|
Preference number: 2 (lower is better) Translates to: FGTVVVLSLFRDKTEAKPLLYFY*RNEGLG Trigger: CCCGAGTCCTTCATTTCTTCAGTAGAAGTAAAGTAA...TGGCTTTGCTTCAGTTTTATCTCTGAACAAGGAAAGGACTACCACTGTCCCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGTCGTACAACTGTTTGTTCCTGAAAGCTATTGACTCCAATATTGCTCGGACATCAAAATGTCAATGTTaGAAGGTGTGGTGGTGCACA | + |
|
Preference number: 2 (lower is better) Translates to: MSYNCLFLKAIDSNIARTSKCQC*KVWWCT Trigger: TGTGCACCACCACACCTTGCAACATTGACATTTTGA...TGTCCGAGCAATATTGGAGTCAATAGCTTTCAGGAACAAACAGTTGTACGACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGCAGTTCAAAATGTCAATGTTGCAAGGTGTGGTGGTGCACACCTTTAACCCCCAAAGCAAAGTCAGATaGAGTTCAAAATGTCAATGT | + |
|
Preference number: 2 (lower is better) Translates to: MQFKMSMLQGVVVHTFNPQSKVR*SSKCQC Trigger: ACATTGACATTTTGAACTGCATCTGACTTTGCTTTG...GGGGTTAAAGGTGTGCACCACCACACCTTGCAACATTGACATTTTGAACTGCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGGGGACATTTATGCGAGCATTTCAACAAGTCAAGAAAGATAAAGAGCCAGGATTGTTTAAAAGAGCCTaGCTTCTTCTTTCAGCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: KGTFMRAFQQVKKDKEPGLFKRA*LLLSAC Trigger: GCAGGCTGAAAGAAGAAGCCAGGCTCTTTTAAACAA...TCCTGGCTCTTTATCTTTCTTGACTTGTTGAAATGCTCGCATAAATGTCCCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| 3UTR-3UTR CCA 90 bp | ATGTCGTACAACTGTTTGTTCCTGAAAGCTATTGACTCCAATATTGCTCGGACAAACAGCCTGCATCAGTaGTTCTCAAATGACAATGAT | + |
|
Preference number: 2 (lower is better) Translates to: MSYNCLFLKAIDSNIARTNSLHQ*FSNDND Trigger: ATCATTGTCATTTGAGAACCACTGATGCAGGCTGTT...TGTCCGAGCAATATTGGAGTCAATAGCTTTCAGGAACAAACAGTTGTACGACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR-3UTR GCA 90 bp | ACTCTGAGGCATAGCAATTATTTCTATGAACTGAAAAAGTCTTGCCAGCCTCTTACAAGGCTAGTTAGCTaGAGTCTAACATATAAAACT | + |
|
Preference number: 2 (lower is better) Translates to: TLRHSNYFYELKKSCQPLTRLVS*SLTYKT Trigger: AGTTTTATATGTTAGACTGCAGCTAACTAGCCTTGT...AAGAGGCTGGCAAGACTTTTTCAGTTCATAGAAATAATTGCTATGCCTCAGAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| 3UTR CCA 72 bp | GTGTCACCCAGATTGCCTGGACTTCACTGCATCGTCTaGACAGGCTCCAAGCTCAAGCTCCCCTGGCCGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VSPRLPGLHCIV*TGSKLKLPWPQ Trigger: CTGCGGCCAGGGGAGCTTGAGCTTGGAGCCTGTCCAGACGATGCAGTGAAGTCCAGGCAATCTGGGTGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| 3UTR GCA 72 bp | AGCTCCCCTGGCCGCAGCCTCGAAAGTCCCCATATTTaGCACCATGCCCAGCCTCAACATCCCTTTCAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: SSPGRSLESPHI*HHAQPQHPFQS Trigger: GGACTGAAAGGGATGTTGAGGCTGGGCATGGTGGCAAATATGGGGACTTTCGAGGCTGCGGCCAGGGGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| 3UTR GCA 72 bp | GGCCTCACTGTGTCACCCAGATTGCCTGGACTTCACTaGATCGTCTGGACAGGCTCCAAGCTCAAGCTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: GLTVSPRLPGLH*IVWTGSKLKLP Trigger: GGGGAGCTTGAGCTTGGAGCCTGTCCAGACGATGCAGTGAAGTCCAGGCAATCTGGGTGACACAGTGAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| 3UTR CCA 72 bp | TGCATCGTCTGGACAGGCTCCAAGCTCAAGCTCCCCTaGCCGCAGCCTCGAAAGTCCCCATATTTGCCACCA | + |
|
Preference number: 3 (lower is better) Translates to: CIVWTGSKLKLP*PQPRKSPYLPP Trigger: TGGTGGCAAATATGGGGACTTTCGAGGCTGCGGCCAGGGGAGCTTGAGCTTGGAGCCTGTCCAGACGATGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| 3UTR TCA 72 bp | CCCAGAACTCAGGAGGCAGAGGCAGGCGGAGTTCTGTaGATGAGGAGGCAACCTGGTCTACACAGTGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: PRTQEAEAGGVL*MRRQPGLHSEF Trigger: GAACTCACTGTGTAGACCAGGTTGCCTCCTCATTCACAGAACTCCGCCTGCCTCTGCCTCCTGAGTTCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
||
| 3UTR GCA 72 bp | CCCAGGGGAATGCTGAACAGTGGAGGTCAGGGATACTaGCAAGCATCCCACTGTGTCCAGCATAGCATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: PRGMLNSGGQGY*QASHCVQHSIP Trigger: TGGGATGCTATGCTGGACACAGTGGGATGCTTGGCAGTATCCCTGACCTCCACTGTTCAGCATTCCCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
||
| 3UTR GCA 72 bp | CCCGTCTCGAAGCAGCACTCTCCAAACATGGCCGACTaGTGGTCACCAACCAAGGCAACAACTGGTATAGGC | + |
|
Preference number: 3 (lower is better) Translates to: PVSKQHSPNMAD*WSPTKATTGIG Trigger: GCCTATACCAGTTGTTGCCTTGGTTGGTGACCAGCAGTCGGCCATGTTTGGAGAGTGCTGCTTCGAGACGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR GCA 72 bp | ATGCCCAGCCTCAACATCCCTTTCAGTCCACTGAGATaGGTTCCTCAATGTATGCTGAGTGCCCACCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: MPSLNIPFSPLR*VPQCMLSAHPG Trigger: GCCTGGGTGGGCACTCAGCATACATTGAGGAACGCATCTCAGTGGACTGAAAGGGATGTTGAGGCTGGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| 3UTR CCA 72 bp | GTCTCGAAGCAGCACTCTCCAAACATGGCCGACTGCTaGTCACCAACCAAGGCAACAACTGGTATAGGCACG | + |
|
Preference number: 3 (lower is better) Translates to: VSKQHSPNMADC*SPTKATTGIGT Trigger: CGTGCCTATACCAGTTGTTGCCTTGGTTGGTGACCAGCAGTCGGCCATGTTTGGAGAGTGCTGCTTCGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGCTCCAAGCTCAAGCTCCCCTGGCCGCAGCCTCGAAAGTCCCCATATTTGAGTGGACAGTGTCCTTaGGAAATCGCCAGAAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: TGSKLKLPWPQPRKSPYLSGQCP*EIARRK Trigger: CTTTCTTCTGGCGATTTCCAAAGGACACTGTCCACT...CAAATATGGGGACTTTCGAGGCTGCGGCCAGGGGAGCTTGAGCTTGGAGCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| 3UTR-3UTR CAA 90 bp | ACCATCTCGCTTTGCCTCAGCTTCTGGAGCTCTTCCTTGTCCGCCCAAAATCCATGCTGGGTGCTGAAATaGAAGCGGCTGACCGTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: TISLCLSFWSSSLSAQNPCWVLK*KRLTVS Trigger: GCTAACGGTCAGCCGCTTCAATTTCAGCACCCAGCA...TGGATTTTGGGCGGACAAGGAAGAGCTCCAGAAGCTGAGGCAAAGCGAGATGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR CCA 72 bp | GCCAGAGAGGCTGCCCCCAAGCAGGACATGTCGAAGTaGGCAGGTCTGTCTATCTTCTCATTTATCAGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: AREAAPKQDMSK*AGLSIFSFIRS Trigger: AGACCTGATAAATGAGAAGATAGACAGACCTGCCCACTTCGACATGTCCTGCTTGGGGGCAGCCTCTCTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR CCA 72 bp | ATAGCTGGTATCCTTCACAGGAGGCAGGATAGACAGTaGGATGGAGACCATGGTGGTTATGAGCCTGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: IAGILHRRQDRQ*DGDHGGYEPAP Trigger: TGGAGCAGGCTCATAACCACCATGGTCTCCATCCCACTGTCTATCCTGCCTCCTGTGAAGGATACCAGCTAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR CCA 72 bp | ACGCCTCCATCTGCCCGGATGTTCGTGACGGGAATCTaGATTTCTCTCTGCAGCATGTCGTACAACTGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: TPPSARMFVTGI*ISLCSMSYNCL Trigger: CAAACAGTTGTACGACATGCTGCAGAGAGAAATCCAGATTCCCGTCACGAACATCCGGGCAGATGGAGGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR-3UTR CAA 90 bp | TACTGCCAAGCATCCCACTGTGTCCAGCATAGCATCCCAAAGCAAAGTCAGATGGGAGCAAACGTGGCTTaGGCTTCAGGAAGCATCGAG | + |
|
Preference number: 3 (lower is better) Translates to: YCQASHCVQHSIPKQSQMGANVA*ASGSIE Trigger: CTCGATGCTTCCTGAAGCCAAAGCCACGTTTGCTCC...CATCTGACTTTGCTTTGGGATGCTATGCTGGACACAGTGGGATGCTTGGCAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| 3UTR TCA 72 bp | GGAGCAAACGTGGCTTTGGCTTCAGGAAGCATCGAGTaGAGCTTTGGGACAGTGGTAGTCCTTTCCTTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: GANVALASGSIE*SFGTVVVLSLF Trigger: GAACAAGGAAAGGACTACCACTGTCCCAAAGCTTCACTCGATGCTTCCTGAAGCCAAAGCCACGTTTGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| 3UTR GCA 72 bp | GAGCCCACATTATGGCGGTGCCCGTGTCTCCTGCATTaGCTTCAGCTAAACATACAAGTTCTTGCCCAATCT | + |
|
Preference number: 3 (lower is better) Translates to: EPTLWRCPCLLH*LQLNIQVLAQS Trigger: AGATTGGGCAAGAACTTGTATGTTTAGCTGAAGGCAATGCAGGAGACACGGGCACCGCCATAATGTGGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAAACCATCTCGCTTTGCCTCAGCTTCTGGAGCTCTTCCTTGTCCGCCCAAAAAGCCAGGGCTACACATaGAGACCCTGTCATAAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: ENHLALPQLLELFLVRPKSQGYT*RPCHKN Trigger: GTTTTTATGACAGGGTCTCAATGTGTAGCCCTGGCT...TTTTGGGCGGACAAGGAAGAGCTCCAGAAGCTGAGGCAAAGCGAGATGGTTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGACACAACCAACCAACACTTTTTCTTCATTACCGAGCAAAACCGAAACCGCCAGGATGGCCAATGTaGGCAGGCATTTGGGGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: KGHNQPTLFLHYRAKPKPPGWPM*AGIWGH Trigger: ATGGCCCCAAATGCCTGCCAACATTGGCCATCCTGG...CGGTTTCGGTTTTGCTCGGTAATGAAGAAAAAGTGTTGGTTGGTTGTGTCCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
||
| 3UTR TCA 72 bp | CGATGGTGCCCGCCTATAATCTTAGAATCTGAGAGATaGGGAAGAAGGTCATGTTTCAGGCTAGCCTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RWCPPIILESER*GRRSCFRLAWA Trigger: AGCCCAGGCTAGCCTGAAACATGACCTTCTTCCTCATCTCTCAGATTCTAAGATTATAGGCGGGCACCATCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| 3UTR TCA 72 bp | CCAGGCACGATGGTGCCCGCCTATAATCTTAGAATCTaGGAGATGAGGAAGAAGGTCATGTTTCAGGCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: PGTMVPAYNLRI*EMRKKVMFQAS Trigger: GCTAGCCTGAAACATGACCTTCTTCCTCATCTCTCAGATTCTAAGATTATAGGCGGGCACCATCGTGCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| 3UTR GCA 72 bp | ATGAGTTCCAGACCAACCTGGGCCCTGTCTCAGAAGTaGAGGGGTAGGAACAGATGGTCTACAGAATATAAC | + |
|
Preference number: 3 (lower is better) Translates to: MSSRPTWALSQK*RGRNRWSTEYN Trigger: GTTATATTCTGTAGACCATCTGTTCCTACCCCTGCACTTCTGAGACAGGGCCCAGGTTGGTCTGGAACTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
||
| 3UTR GCA 72 bp | GCCCGGATGTTCGTGACGGGAATCTGGATTTCTCTCTaGAGCATGTCGTACAACTGTTTGTTCCTGAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: ARMFVTGIWISL*SMSYNCLFLKA Trigger: AGCTTTCAGGAACAAACAGTTGTACGACATGCTGCAGAGAGAAATCCAGATTCCCGTCACGAACATCCGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR CCA 72 bp | CAAAGTAGCTGGGCATGCTTAGCATGCACCAGACTCTaGGGTGAATTCCCAGACCAGCTTATACCATGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: QSSWACLACTRL*GEFPDQLIPCV Trigger: TACACATGGTATAAGCTGGTCTGGGAATTCACCCCAGAGTCTGGTGCATGCTAAGCATGCCCAGCTACTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTAAGTTCTGTGGGGAGCAAACGTGGCTTTGGCTTCAGGAAGCATCGAGTGTTCAAAATGTCAATGTaGCAAGGTGTGGTGGTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: VLSSVGSKRGFGFRKHRVFKMSM*QGVVVH Trigger: GTGCACCACCACACCTTGCAACATTGACATTTTGAA...CACTCGATGCTTCCTGAAGCCAAAGCCACGTTTGCTCCCCACAGAACTTAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| 3UTR CCA 72 bp | GTCAGATGCAGTTCAAAATGTCAATGTTGCAAGGTGTaGTGGTGCACACCTTTAACCCCAGAACTCAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: VRCSSKCQCCKV*WCTPLTPELRR Trigger: CCTCCTGAGTTCTGGGGTTAAAGGTGTGCACCACCACACCTTGCAACATTGACATTTTGAACTGCATCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGTGGTTCTCAAATGACAATGATTTTTGCCTCCCAGGATGGCCAATGTTGGCACCCGTGTCTCCTGCATaGCCTTCAGCTAAACATACA | + |
|
Preference number: 3 (lower is better) Translates to: QWFSNDNDFCLPGWPMLAPVSPA*PSAKHT Trigger: TGTATGTTTAGCTGAAGGCAATGCAGGAGACACGGG...TGCCAACATTGGCCATCCTGGGAGGCAAAAATCATTGTCATTTGAGAACCACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGATACTGCCAAGCATCCCACTGTGTCCAGCATAGCATCCCAAAGCAAAGTATGTCGTACAACTGTTaGTTCCTGAAAGCTATTGAC | + |
|
Preference number: 3 (lower is better) Translates to: QGYCQASHCVQHSIPKQSMSYNC*FLKAID Trigger: GTCAATAGCTTTCAGGAACAAACAGTTGTACGACAT...ACTTTGCTTTGGGATGCTATGCTGGACACAGTGGGATGCTTGGCAGTATCCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR TCA 72 bp | AGGCTCAAGGCTGTAGGTTTGATCCATCTTCAGAGGTaGTGGGTAAGGGACACAACCAACCAACACTTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: RLKAVGLIHLQR*WVRDTTNQHFF Trigger: GAAAAAGTGTTGGTTGGTTGTGTCCCTTACCCATCACCTCTGAAGATGGATCAAACCTACAGCCTTGAGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
||
| 3UTR TCA 72 bp | CTATCTTCTCATTTATCAGGTCTGAAGTCATCTGCATaGCGAAAGCGTTGTTACACACGCCTCCATCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LSSHLSGLKSSA*RKRCYTRLHLP Trigger: GGGCAGATGGAGGCGTGTGTAACAACGCTTTCGTCATGCAGATGACTTCAGACCTGATAAATGAGAAGATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR GCA 72 bp | AGGTTTTGTAAAATCCAGGTCAATCTTAAGGTGGCATaGTGGGTGCTGAAATTGAAGCGGCTGACCGTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: RFCKIQVNLKVA*WVLKLKRLTVS Trigger: GCTAACGGTCAGCCGCTTCAATTTCAGCACCCAGCATGCCACCTTAAGATTGACCTGGATTTTACAAAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCAAAATGTCAATGTTGCAAGGTGTGGTGGTGCACACCTTTAACCCCAGAACTAAGTGGCTCTCTGTGTaGATATGCCAAGACCGACAA | + |
|
Preference number: 3 (lower is better) Translates to: FKMSMLQGVVVHTFNPRTKWLSV*ICQDRQ Trigger: TTGTCGGTCTTGGCATATCAACACAGAGAGCCACTT...AGTTCTGGGGTTAAAGGTGTGCACCACCACACCTTGCAACATTGACATTTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGCAGTTCAAAATGTCAATGTTGCAAGGTGTGGTGGTGCACACCTTTAACCCCGTCCCAAAGCAACAATaGTCTTCTTCAACTGCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: MQFKMSMLQGVVVHTFNPVPKQQ*SSSTAL Trigger: AAGGGCAGTTGAAGAAGACAATTGTTGCTTTGGGAC...GGGGTTAAAGGTGTGCACCACCACACCTTGCAACATTGACATTTTGAACTGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR TCA 72 bp | GTGGGCAGGTCTGTCTATCTTCTCATTTATCAGGTCTaGAGTCATCTGCATGACGAAAGCGTTGTTACACAC | + |
|
Preference number: 3 (lower is better) Translates to: VGRSVYLLIYQV*SHLHDESVVTH Trigger: GTGTGTAACAACGCTTTCGTCATGCAGATGACTTCAGACCTGATAAATGAGAAGATAGACAGACCTGCCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR GCA 72 bp | AGAATCTTAAAGGTTCAGGGTATGCCTGAAGCTTCTTaGCCTGACTCGAAAAAGCACAATCGAAGCTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: RILKVQGMPEAS*PDSKKHNRSFP Trigger: TGGGAAGCTTCGATTGTGCTTTTTCGAGTCAGGGCAAGAAGCTTCAGGCATACCCTGAACCTTTAAGATTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| 3UTR GCA 72 bp | ATGAGCCTCACACTGTGTAATGAGCCCAGAAGTAAATaGCCTTCTGTTGGGCACACTGTAAGACAATGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: MSLTLCNEPRSK*PSVGHTVRQCS Trigger: TGAACATTGTCTTACAGTGTGCCCAACAGAAGGGCATTTACTTCTGGGCTCATTACACAGTGTGAGGCTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| 3UTR-3UTR CAA 90 bp | GACAAAGACAAGAACAAAGATGTAAAAGATGAGGGCAAGCAGATGGCAGAAAGCAGCCAGGGCTACACATaGAGACCCTGTCATAAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: DKDKNKDVKDEGKQMAESSQGYT*RPCHKN Trigger: GTTTTTATGACAGGGTCTCAATGTGTAGCCCTGGCT...GCTTTCTGCCATCTGCTTGCCCTCATCTTTTACATCTTTGTTCTTGTCTTTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| 3UTR TCA 72 bp | GCACATGAAATAGTATTTAACATCACTGAATGCTGGTaGGAGAACATGGAGAGACTGGACCACTCACACAGG | + |
|
Preference number: 3 (lower is better) Translates to: AHEIVFNITECW*ENMERLDHSHR Trigger: CCTGTGTGAGTGGTCCAGTCTCTCCATGTTCTCTCACCAGCATTCAGTGATGTTAAATACTATTTCATGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| 3UTR TCA 72 bp | CTGACCGTTAGCATTACTTTACTTCTACTGAAGAAATaGAGGACTCGGGTGGCCCCATGCAATAGCTTCATT | + |
|
Preference number: 3 (lower is better) Translates to: LTVSITLLLLKK*RTRVAPCNSFI Trigger: AATGAAGCTATTGCATGGGGCCACCCGAGTCCTTCATTTCTTCAGTAGAAGTAAAGTAATGCTAACGGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR TCA 72 bp | CATTTGAATAATCCGTGGCGTAGGAAGAACCTTTCGTaGGCTTGTATAACAGCCAGGTATCAATCGTCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: HLNNPWRRKNLS*ACITARYQSSQ Trigger: TTGGGACGATTGATACCTGGCTGTTATACAAGCTCACGAAAGGTTCTTCCTACGCCACGGATTATTCAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR TCA 72 bp | GTTAGTGCCACGTTAAGACAGGAACACTGTCCTTTCTaGGTTTGCTGGAGTCCTCTTAAAATGCCTCGTATT | + |
|
Preference number: 3 (lower is better) Translates to: VSATLRQEHCPF*VCWSPLKMPRI Trigger: AATACGAGGCATTTTAAGAGGACTCCAGCAAACTCAGAAAGGACAGTGTTCCTGTCTTAACGTGGCACTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR GCA 72 bp | AATATTGCTCGGACAAGATGGTATTTATTAGTGGAGTaGTTCAAACCCATAAAAGAGGCACAGGCACAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: NIARTRWYLLVE*FKPIKEAQAQG Trigger: CCCCTGTGCCTGTGCCTCTTTTATGGGTTTGAAGCACTCCACTAATAAATACCATCTTGTCCGAGCAATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR GCA 72 bp | CTGTCTATCTTCTCATTTATCAGGTCTGAAGTCATCTaGATGACGAAAGCGTTGTTACACACGCCTCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: LSIFSFIRSEVI*MTKALLHTPPS Trigger: AGATGGAGGCGTGTGTAACAACGCTTTCGTCATGCAGATGACTTCAGACCTGATAAATGAGAAGATAGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR TCA 72 bp | CTGGCATGGGCTAAACAGGATCTTCTCTCAAACAAATaGGATATTTTCAAAGACAAGGCCTCACTGTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LAWAKQDLLSNK*DIFKDKASLCH Trigger: GTGACACAGTGAGGCCTTGTCTTTGAAAATATCTCATTTGTTTGAGAGAAGATCCTGTTTAGCCCATGCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| 3UTR TCA 72 bp | GGAACAGATGGTCTACAGAATATAACCGTCATATCGTaGGGCCAAATGTCCACTAATTGTGAACACACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GTDGLQNITVIS*GQMSTNCEHTG Trigger: TCCTGTGTGTTCACAATTAGTGGACATTTGGCCTCACGATATGACGGTTATATTCTGTAGACCATCTGTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
||
| 3UTR TCA 72 bp | AACATAAAATGGAACAGCCACTCTGAGTGTGGTTCTTaGTCGTTTCTTTCTGACTTGTACCTCTGGGGACAA | + |
|
Preference number: 3 (lower is better) Translates to: NIKWNSHSECGS*SFLSDLYLWGQ Trigger: TTGTCCCCAGAGGTACAAGTCAGAAAGAAACGATCAAGAACCACACTCAGAGTGGCTGTTCCATTTTATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| 3UTR TCA 72 bp | AACTGGTATAGGCACGCCAAATATCTTCTCATCCACTaGTCCAAAATTATAGCTGGTATCCTTCACAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: NWYRHAKYLLIH*SKIIAGILHRR Trigger: CCTCCTGTGAAGGATACCAGCTATAATTTTGGATCAGTGGATGAGAAGATATTTGGCGTGCCTATACCAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR GCA 72 bp | TGTGCCTCAATGAAAACAACGAAACAGCTCAGGTTGTaGAGAAGAATTAAGGCCGTGTCTTTATGCATGACA | + |
|
Preference number: 3 (lower is better) Translates to: CASMKTTKQLRL*RRIKAVSLCMT Trigger: TGTCATGCATAAAGACACGGCCTTAATTCTTCTGCACAACCTGAGCTGTTTCGTTGTTTTCATTGAGGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| 3UTR TCA 72 bp | TGCCGTAGAAACCTTGTTTTTGTTCTTTTCACAGCATaGGCCTCACACTGTGTAATGAGCCCAGAAGTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: CRRNLVFVLFTA*ASHCVMSPEVN Trigger: ATTTACTTCTGGGCTCATTACACAGTGTGAGGCTCATGCTGTGAAAAGAACAAAAACAAGGTTTCTACGGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| 3UTR TCA 72 bp | TTTCTCTCTGCAGCATGTCGTACAACTGTTTGTTCCTaGAAGCTATTGACTCCAATATTGCTCGGACAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: FLSAACRTTVCS*KLLTPILLGQD Trigger: ATCTTGTCCGAGCAATATTGGAGTCAATAGCTTTCAGGAACAAACAGTTGTACGACATGCTGCAGAGAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR GCA 72 bp | CACCAAAGTGTTGGGCACAACACAAGGCTAGTTAGCTaGAGTCTAACATATAAAACTGTGGATGAAAGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: HQSVGHNTRLVS*SLTYKTVDESF Trigger: GAAACTTTCATCCACAGTTTTATATGTTAGACTGCAGCTAACTAGCCTTGTGTTGTGCCCAACACTTTGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| 3UTR CCA 72 bp | CCAAATCCTCATGTTTATTCTAACAGCCTGCATCAGTaGTTCTCAAATGACAATGATTTTTGCCTCCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PNPHVYSNSLHQ*FSNDNDFCLPG Trigger: TCCTGGGAGGCAAAAATCATTGTCATTTGAGAACCACTGATGCAGGCTGTTAGAATAAACATGAGGATTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGGACAGTGGTAGTCCTTTCCTTGTTCAGAGATAAAACTGAAGCAAAGCCAGTGGTAGTCCTTTCCTaGTTCAGAGATAAAACTGAA | + |
|
Preference number: 3 (lower is better) Translates to: FGTVVVLSLFRDKTEAKPVVVLS*FRDKTE Trigger: TTCAGTTTTATCTCTGAACAAGGAAAGGACTACCAC...TGGCTTTGCTTCAGTTTTATCTCTGAACAAGGAAAGGACTACCACTGTCCCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGGACAGTGGTAGTCCTTTCCTTGTTCAGAGATAAAACTGAAGCAAAGCCACTATTGACTCCAATATaGCTCGGACAAGATGGTATT | + |
|
Preference number: 3 (lower is better) Translates to: FGTVVVLSLFRDKTEAKPLLTPI*LGQDGI Trigger: AATACCATCTTGTCCGAGCAATATTGGAGTCAATAG...TGGCTTTGCTTCAGTTTTATCTCTGAACAAGGAAAGGACTACCACTGTCCCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR CCA 72 bp | GTATCTGAAATGCAGTTAGAAGTGGACAGTGTCCTTTaGAAATCGCCAGAAGAAAGAAGACTCAATTTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: VSEMQLEVDSVL*KSPEERRLNFE Trigger: CTCAAAATTGAGTCTTCTTTCTTCTGGCGATTTCCAAAGGACACTGTCCACTTCTAACTGCATTTCAGATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| 3UTR CCA 72 bp | AAACGTCCTCTCAACTACCTCTTCGTTTTAGCTATGTaGGTTTCAAAGAGCCCTCTTGATTTCAAATTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: KRPLNYLFVLAM*VSKSPLDFKFK Trigger: CTTAAATTTGAAATCAAGAGGGCTCTTTGAAACCCACATAGCTAAAACGAAGAGGTAGTTGAGAGGACGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| 3UTR CCA 72 bp | CTGAAAGCTATTGACTCCAATATTGCTCGGACAAGATaGTATTTATTAGTGGAGTGCTTCAAACCCATAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LKAIDSNIARTR*YLLVECFKPIK Trigger: TTTTATGGGTTTGAAGCACTCCACTAATAAATACCATCTTGTCCGAGCAATATTGGAGTCAATAGCTTTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR TCA 72 bp | TCACTGAAGAGTGACGTCAGAGCTTATCTGAGGATATaGCACTTGACAATTATGGCTTTATATATAAAACGT | + |
|
Preference number: 3 (lower is better) Translates to: SLKSDVRAYLRI*HLTIMALYIKR Trigger: ACGTTTTATATATAAAGCCATAATTGTCAAGTGTCATATCCTCAGATAAGCTCTGACGTCACTCTTCAGTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| 3UTR CCA 72 bp | AATTCATTTCCCAGGAGAAAACAGTGCATAGACTATTaGGAATGTGACTATATTCACCAAATCCTCATGTTT | + |
|
Preference number: 3 (lower is better) Translates to: NSFPRRKQCIDY*ECDYIHQILMF Trigger: AAACATGAGGATTTGGTGAATATAGTCACATTCCCAATAGTCTATGCACTGTTTTCTCCTGGGAAATGAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
||
| CDS-3UTR GCA 90 bp | TCACTGCATCGTCTGGACAGGCTCCAAGCTCAAGCTCCCCTGGCCGCAGCCTCGCTCAGTTCCTCTCGCTaGCGCTCTGCACGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLHRLDRLQAQAPLAAASLSSSR*RSARSC Trigger: GCAGGAGCGTGCAGAGCGGCAGCGAGAGGAACTGAG...CGAGGCTGCGGCCAGGGGAGCTTGAGCTTGGAGCCTGTCCAGACGATGCAGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR GCA 90 bp | TCAGCACCCAGGAGGCTGAGGCAGGAATACTGCCATGAGTTCCAGACCAACCTGGGCAGCGGATCACCGTaGTGCCCACGTCCAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SAPRRLRQEYCHEFQTNLGSGSP*CPRPAP Trigger: TGGGGCTGGACGTGGGCAGCACGGTGATCCGCTGCC...CAGGTTGGTCTGGAACTCATGGCAGTATTCCTGCCTCAGCCTCCTGGGTGCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
||
| CDS-3UTR GCA 90 bp | ATAGACAGTGGGATGGAGACCATGGTGGTTATGAGCCTGCTCCAGCGCATCGCACTCAGTTCCTCTCGCTaGCGCTCTGCACGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IDSGMETMVVMSLLQRIALSSSR*RSARSC Trigger: GCAGGAGCGTGCAGAGCGGCAGCGAGAGGAACTGAG...TGCGATGCGCTGGAGCAGGCTCATAACCACCATGGTCTCCATCCCACTGTCTAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| CDS-3UTR GCA 90 bp | CATATTTGCCACCATGCCCAGCCTCAACATCCCTTTCAGTCCACTGAGATGCGTGGCAGCGGATCACCGTaGTGCCCACGTCCAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HICHHAQPQHPFQSTEMRGSGSP*CPRPAP Trigger: TGGGGCTGGACGTGGGCAGCACGGTGATCCGCTGCC...ACGCATCTCAGTGGACTGAAAGGGATGTTGAGGCTGGGCATGGTGGCAAATATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR GCA 90 bp | GCCTGGACTTCACTGCATCGTCTGGACAGGCTCCAAGCTCAAGCTCCCCTGGCCACATTTTCTACCTTCTaGGCGCTGGAGCCTCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: AWTSLHRLDRLQAQAPLATFSTF*ALEPRT Trigger: AGTGCGAGGCTCCAGCGCGCAGAAGGTAGAAAATGT...GGCCAGGGGAGCTTGAGCTTGGAGCCTGTCCAGACGATGCAGTGAAGTCCAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR GCA 90 bp | TCACTGCATCGTCTGGACAGGCTCCAAGCTCAAGCTCCCCTGGCCGCAGCCTCGACTCGGGTGGCCCCATaGAATAGCTTCATTATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLHRLDRLQAQAPLAAASTRVAP*NSFIMR Trigger: TCTCATAATGAAGCTATTGCATGGGGCCACCCGAGT...CGAGGCTGCGGCCAGGGGAGCTTGAGCTTGGAGCCTGTCCAGACGATGCAGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR GCA 90 bp | CCACTGAGATGCGTTCCTCAATGTATGCTGAGTGCCCACCCAGGCACGATGGTGCCCACATTATGGCGGTaGCCGTGTCTCCTGCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: PLRCVPQCMLSAHPGTMVPTLWR*PCLLHC Trigger: GCAATGCAGGAGACACGGGCACCGCCATAATGTGGG...CACCATCGTGCCTGGGTGGGCACTCAGCATACATTGAGGAACGCATCTCAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR GCA 90 bp | TCAGCACCCAGGAGGCTGAGGCAGGAATACTGCCATGAGTTCCAGACCAACCTGCCCACATTATGGCGGTaGCCGTGTCTCCTGCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: SAPRRLRQEYCHEFQTNLPTLWR*PCLLHC Trigger: GCAATGCAGGAGACACGGGCACCGCCATAATGTGGG...CAGGTTGGTCTGGAACTCATGGCAGTATTCCTGCCTCAGCCTCCTGGGTGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| CDS-3UTR CCA 90 bp | GCCTGGACTTCACTGCATCGTCTGGACAGGCTCCAAGCTCAAGCTCCCCTGGCCCAGGACATGTCGAAGTaGGCAGGTCTGTCTATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AWTSLHRLDRLQAQAPLAQDMSK*AGLSIF Trigger: GAAGATAGACAGACCTGCCCACTTCGACATGTCCTG...GGCCAGGGGAGCTTGAGCTTGGAGCCTGTCCAGACGATGCAGTGAAGTCCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR TCA 90 bp | GCCTGGACTTCACTGCATCGTCTGGACAGGCTCCAAGCTCAAGCTCCCCTGGCCACTTCTTCTGAGGCTTaGAAACCATCTCGCTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AWTSLHRLDRLQAQAPLATSSEA*KPSRFA Trigger: GGCAAAGCGAGATGGTTTTCAAGCCTCAGAAGAAGT...GGCCAGGGGAGCTTGAGCTTGGAGCCTGTCCAGACGATGCAGTGAAGTCCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR GCA 90 bp | CTCAACATCCCTTTCAGTCCACTGAGATGCGTTCCTCAATGTATGCTGAGTGCCAGCGGATCACCGTGCTaGCCACGTCCAGCCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LNIPFSPLRCVPQCMLSASGSPC*PRPAPA Trigger: TGCTGGGGCTGGACGTGGGCAGCACGGTGATCCGCT...GGCACTCAGCATACATTGAGGAACGCATCTCAGTGGACTGAAAGGGATGTTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR CCA 90 bp | CTCGGCCACAGTCACACGGTGACCCCTGTGCAGCCCCCACCGGCACATCCTGTCATCCAAAATTATAGCTaGTATCCTTCACAGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGHSHTVTPVQPPPAHPVIQNYS*YPSQEA Trigger: TGCCTCCTGTGAAGGATACCAGCTATAATTTTGGAT...GACAGGATGTGCCGGTGGGGGCTGCACAGGGGTCACCGTGTGACTGTGGCCGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR CCA 90 bp | ACAGGCTCCAAGCTCAAGCTCCCCTGGCCGCAGCCTCGAAAGTCCCCATATTTGAGCACTCTCCAAACATaGCCGACTGCTGGTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: TGSKLKLPWPQPRKSPYLSTLQT*PTAGHQ Trigger: TTGGTGACCAGCAGTCGGCCATGTTTGGAGAGTGCT...CAAATATGGGGACTTTCGAGGCTGCGGCCAGGGGAGCTTGAGCTTGGAGCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR CCA 90 bp | TCAGCACCCAGGAGGCTGAGGCAGGAATACTGCCATGAGTTCCAGACCAACCTGCTTTGCCTCAGCTTCTaGAGCTCTTCCTTGTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SAPRRLRQEYCHEFQTNLLCLSF*SSSLSA Trigger: GGCGGACAAGGAAGAGCTCCAGAAGCTGAGGCAAAG...CAGGTTGGTCTGGAACTCATGGCAGTATTCCTGCCTCAGCCTCCTGGGTGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| 3UTR CAA 72 bp | ACCATCTCGCTTTGCCTCAGCTTCTGGAGCTCTTCCTaGTCCGCCCAAAATCCAACAGCGAGGCCAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TISLCLSFWSSS*SAQNPTARPAR Trigger: TCTGGCTGGCCTCGCTGTTGGATTTTGGGCGGACAAGGAAGAGCTCCAGAAGCTGAGGCAAAGCGAGATGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGCTCCAAGCTCAAGCTCCCCTGGCCGCAGCCTCGAAAGTCCCCATATTTGGCACCCCTGCAGCTTTaGCAGCATCTTTTATTACGG | + |
|
Preference number: 4 (lower is better) Translates to: TGSKLKLPWPQPRKSPYLAPLQL*QHLLLR Trigger: CCGTAATAAAAGATGCTGTCAAAGCTGCAGGGGTGC...CAAATATGGGGACTTTCGAGGCTGCGGCCAGGGGAGCTTGAGCTTGGAGCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR TCA 90 bp | TCACTGCATCGTCTGGACAGGCTCCAAGCTCAAGCTCCCCTGGCCGCAGCCTCGCTCATTTATCAGGTCTaGAGTCATCTGCATGACGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLHRLDRLQAQAPLAAASLIYQV*SHLHDE Trigger: TTCGTCATGCAGATGACTTCAGACCTGATAAATGAG...CGAGGCTGCGGCCAGGGGAGCTTGAGCTTGGAGCCTGTCCAGACGATGCAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR TCA 90 bp | ACAGGCTCCAAGCTCAAGCTCCCCTGGCCGCAGCCTCGAAAGTCCCCATATTTGTCCTGCCACTTCTTCTaGGGCTTGAAAACCATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TGSKLKLPWPQPRKSPYLSCHFF*GLKTIS Trigger: CGAGATGGTTTTCAAGCCTCAGAAGAAGTGGCAGGA...CAAATATGGGGACTTTCGAGGCTGCGGCCAGGGGAGCTTGAGCTTGGAGCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR GCA 90 bp | CAGTGGTTCTCAAATGACAATGATTTTTGCCTCCCAGGATGGCCAATGTTGGCAGGCAGCGGATCACCGTaGTGCCCACGTCCAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QWFSNDNDFCLPGWPMLAGSGSP*CPRPAP Trigger: TGGGGCTGGACGTGGGCAGCACGGTGATCCGCTGCC...TGCCAACATTGGCCATCCTGGGAGGCAAAAATCATTGTCATTTGAGAACCACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
||
| CDS-3UTR CCA 90 bp | TTTCCTCTCGGCCACAGTCACACGGTGACCCCTGTGCAGCCCCCACCGGCACATAACCAAGGCAACAACTaGTATAGGCACGCCAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: FPLGHSHTVTPVQPPPAHNQGNN*YRHAKY Trigger: ATATTTGGCGTGCCTATACCAGTTGTTGCCTTGGTT...ATGTGCCGGTGGGGGCTGCACAGGGGTCACCGTGTGACTGTGGCCGAGAGGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR TCA 90 bp | TGGCCGCAGCCTCGAAAGTCCCCATATTTGCCACCATGCCCAGCCTCAACATCCAGTGGCTCTCTGTGTTaGTATGCCAAGACCGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: WPQPRKSPYLPPCPASTSSGSLC*YAKTDN Trigger: ATTGTCGGTCTTGGCATATCAACACAGAGAGCCACT...GGATGTTGAGGCTGGGCATGGTGGCAAATATGGGGACTTTCGAGGCTGCGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR GCA 90 bp | GGAATAGTTGACTATCAGGCTCAAGGCTGTAGGTTTGATCCATCTTCAGAGGTGAGCGGATCACCGTGCTaGCCACGTCCAGCCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GIVDYQAQGCRFDPSSEVSGSPC*PRPAPA Trigger: TGCTGGGGCTGGACGTGGGCAGCACGGTGATCCGCT...CACCTCTGAAGATGGATCAAACCTACAGCCTTGAGCCTGATAGTCAACTATTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122383.3 ENSMUST00000129774.2 |
||
| CDS-3UTR CCA 90 bp | TGGCCGCAGCCTCGAAAGTCCCCATATTTGCCACCATGCCCAGCCTCAACATCCATGTTCCAGTTCCCATaGTTAGCTTCACATCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: WPQPRKSPYLPPCPASTSMFQFP*LASHLP Trigger: CGGGAGATGTGAAGCTAACCATGGGAACTGGAACAT...GGATGTTGAGGCTGGGCATGGTGGCAAATATGGGGACTTTCGAGGCTGCGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR CCA 90 bp | TTTCCTCTCGGCCACAGTCACACGGTGACCCCTGTGCAGCCCCCACCGGCACATTGTTATACCAATTCATaGAGCGCTTCACCGCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FPLGHSHTVTPVQPPPAHCYTNS*SASPLL Trigger: TAAAAGCGGTGAAGCGCTCCATGAATTGGTATAACA...ATGTGCCGGTGGGGGCTGCACAGGGGTCACCGTGTGACTGTGGCCGAGAGGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| 3UTR CAA 72 bp | CTGCCACTTCTTCTGAGGCTTGAAAACCATCTCGCTTaGCCTCAGCTTCTGGAGCTCTTCCTTGTCCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPLLLRLENHLA*PQLLELFLVRP Trigger: TGGGCGGACAAGGAAGAGCTCCAGAAGCTGAGGCAAAGCGAGATGGTTTTCAAGCCTCAGAAGAAGTGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| CDS-3UTR TCA 90 bp | GCCTGGACTTCACTGCATCGTCTGGACAGGCTCCAAGCTCAAGCTCCCCTGGCCTTACTTTACTTCTACTaGAGAAATGAAGGACTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: AWTSLHRLDRLQAQAPLALLYFY*RNEGLG Trigger: CCCGAGTCCTTCATTTCTTCAGTAGAAGTAAAGTAA...GGCCAGGGGAGCTTGAGCTTGGAGCCTGTCCAGACGATGCAGTGAAGTCCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR GCA 90 bp | TGGCCGCAGCCTCGAAAGTCCCCATATTTGCCACCATGCCCAGCCTCAACATCCCCGTGTCTCCTGCATTaGCTTCAGCTAAACATACAA | + |
|
Preference number: 4 (lower is better) Translates to: WPQPRKSPYLPPCPASTSPCLLH*LQLNIQ Trigger: TTGTATGTTTAGCTGAAGGCAATGCAGGAGACACGG...GGATGTTGAGGCTGGGCATGGTGGCAAATATGGGGACTTTCGAGGCTGCGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR GCA 90 bp | TCAGCACCCAGGAGGCTGAGGCAGGAATACTGCCATGAGTTCCAGACCAACCTGCCGTGTCTCCTGCATTaGCTTCAGCTAAACATACAA | + |
|
Preference number: 4 (lower is better) Translates to: SAPRRLRQEYCHEFQTNLPCLLH*LQLNIQ Trigger: TTGTATGTTTAGCTGAAGGCAATGCAGGAGACACGG...CAGGTTGGTCTGGAACTCATGGCAGTATTCCTGCCTCAGCCTCCTGGGTGCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| CDS-3UTR CCA 90 bp | CATATTTGCCACCATGCCCAGCCTCAACATCCCTTTCAGTCCACTGAGATGCGTAGGCAGGATAGACAGTaGGATGGAGACCATGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HICHHAQPQHPFQSTEMRRQDRQ*DGDHGG Trigger: ACCACCATGGTCTCCATCCCACTGTCTATCCTGCCT...ACGCATCTCAGTGGACTGAAAGGGATGTTGAGGCTGGGCATGGTGGCAAATATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR CCA 90 bp | CTCAACATCCCTTTCAGTCCACTGAGATGCGTTCCTCAATGTATGCTGAGTGCCCTTTGCCTCAGCTTCTaGAGCTCTTCCTTGTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LNIPFSPLRCVPQCMLSALCLSF*SSSLSA Trigger: GGCGGACAAGGAAGAGCTCCAGAAGCTGAGGCAAAG...GGCACTCAGCATACATTGAGGAACGCATCTCAGTGGACTGAAAGGGATGTTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR GCA 90 bp | TCAGCACCCAGGAGGCTGAGGCAGGAATACTGCCATGAGTTCCAGACCAACCTGAGGTCTGAAGTCATCTaGATGACGAAAGCGTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SAPRRLRQEYCHEFQTNLRSEVI*MTKALL Trigger: TAACAACGCTTTCGTCATGCAGATGACTTCAGACCT...CAGGTTGGTCTGGAACTCATGGCAGTATTCCTGCCTCAGCCTCCTGGGTGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| CDS-3UTR TCA 90 bp | TGGCCGCAGCCTCGAAAGTCCCCATATTTGCCACCATGCCCAGCCTCAACATCCTATCTTCTCATCCACTaGTCCAAAATTATAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: WPQPRKSPYLPPCPASTSYLLIH*SKIIAG Trigger: ACCAGCTATAATTTTGGATCAGTGGATGAGAAGATA...GGATGTTGAGGCTGGGCATGGTGGCAAATATGGGGACTTTCGAGGCTGCGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR GCA 90 bp | TGTCAATGTTGCAAGGTGTGGTGGTGCACACCTTTAACCCCAGAACTCAGGAGGACTCGGGTGGCCCCATaGAATAGCTTCATTATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CQCCKVWWCTPLTPELRRTRVAP*NSFIMR Trigger: TCTCATAATGAAGCTATTGCATGGGGCCACCCGAGT...CCTCCTGAGTTCTGGGGTTAAAGGTGTGCACCACCACACCTTGCAACATTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| CDS-3UTR CCA 90 bp | AAATGTCAATGTTGCAAGGTGTGGTGGTGCACACCTTTAACCCCAGAACTCAGGAGCACTCTCCAAACATaGCCGACTGCTGGTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: KCQCCKVWWCTPLTPELRSTLQT*PTAGHQ Trigger: TTGGTGACCAGCAGTCGGCCATGTTTGGAGAGTGCT...CCTGAGTTCTGGGGTTAAAGGTGTGCACCACCACACCTTGCAACATTGACATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| CDS-3UTR CCA 90 bp | CATATTTGCCACCATGCCCAGCCTCAACATCCCTTTCAGTCCACTGAGATGCGTTTCGTGACGGGAATCTaGATTTCTCTCTGCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: HICHHAQPQHPFQSTEMRFVTGI*ISLCSM Trigger: CATGCTGCAGAGAGAAATCCAGATTCCCGTCACGAA...ACGCATCTCAGTGGACTGAAAGGGATGTTGAGGCTGGGCATGGTGGCAAATATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR TCA 90 bp | AAATGTCAATGTTGCAAGGTGTGGTGGTGCACACCTTTAACCCCAGAACTCAGGTCCTGCCACTTCTTCTaGGGCTTGAAAACCATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KCQCCKVWWCTPLTPELRSCHFF*GLKTIS Trigger: CGAGATGGTTTTCAAGCCTCAGAAGAAGTGGCAGGA...CCTGAGTTCTGGGGTTAAAGGTGTGCACCACCACACCTTGCAACATTGACATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| CDS-3UTR GCA 90 bp | ACTCTGAGGCATAGCAATTATTTCTATGAACTGAAAAAGTCTTGCCAGCCTCTTCTCAGTTCCTCTCGCTaGCGCTCTGCACGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLRHSNYFYELKKSCQPLLSSSR*RSARSC Trigger: GCAGGAGCGTGCAGAGCGGCAGCGAGAGGAACTGAG...AAGAGGCTGGCAAGACTTTTTCAGTTCATAGAAATAATTGCTATGCCTCAGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| CDS-3UTR TCA 90 bp | AAATGTCAATGTTGCAAGGTGTGGTGGTGCACACCTTTAACCCCAGAACTCAGGAGTGGCTCTCTGTGTTaGTATGCCAAGACCGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: KCQCCKVWWCTPLTPELRSGSLC*YAKTDN Trigger: ATTGTCGGTCTTGGCATATCAACACAGAGAGCCACT...CCTGAGTTCTGGGGTTAAAGGTGTGCACCACCACACCTTGCAACATTGACATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| CDS-3UTR TCA 90 bp | AAATGTCAATGTTGCAAGGTGTGGTGGTGCACACCTTTAACCCCAGAACTCAGGCTGAAGTCATCTGCATaGCGAAAGCGTTGTTACACA | + |
|
Preference number: 4 (lower is better) Translates to: KCQCCKVWWCTPLTPELRLKSSA*RKRCYT Trigger: TGTGTAACAACGCTTTCGTCATGCAGATGACTTCAG...CCTGAGTTCTGGGGTTAAAGGTGTGCACCACCACACCTTGCAACATTGACATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| CDS-3UTR TCA 90 bp | GGAATAGTTGACTATCAGGCTCAAGGCTGTAGGTTTGATCCATCTTCAGAGGTGACTTCTTCTGAGGCTTaGAAACCATCTCGCTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GIVDYQAQGCRFDPSSEVTSSEA*KPSRFA Trigger: GGCAAAGCGAGATGGTTTTCAAGCCTCAGAAGAAGT...CACCTCTGAAGATGGATCAAACCTACAGCCTTGAGCCTGATAGTCAACTATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| CDS-3UTR GCA 90 bp | GTGTTAAGTTCTGTGGGGAGCAAACGTGGCTTTGGCTTCAGGAAGCATCGAGTGCTCTCTGTGTTGATATaGCAAGACCGACAATTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VLSSVGSKRGFGFRKHRVLSVLI*QDRQFD Trigger: ATCAAATTGTCGGTCTTGGCATATCAACACAGAGAG...CACTCGATGCTTCCTGAAGCCAAAGCCACGTTTGCTCCCCACAGAACTTAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| CDS-3UTR CCA 90 bp | CTCAACATCCCTTTCAGTCCACTGAGATGCGTTCCTCAATGTATGCTGAGTGCCCATTTGAATAATCCGTaGCGTAGGAAGAACCTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LNIPFSPLRCVPQCMLSAHLNNP*RRKNLS Trigger: CGAAAGGTTCTTCCTACGCCACGGATTATTCAAATG...GGCACTCAGCATACATTGAGGAACGCATCTCAGTGGACTGAAAGGGATGTTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR CCA 90 bp | AGCCTCACACTGTGTAATGAGCCCAGAAGTAAATGCCCTTCTGTTGGGCACACTCATTTGAATAATCCGTaGCGTAGGAAGAACCTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SLTLCNEPRSKCPSVGHTHLNNP*RRKNLS Trigger: CGAAAGGTTCTTCCTACGCCACGGATTATTCAAATG...AGTGTGCCCAACAGAAGGGCATTTACTTCTGGGCTCATTACACAGTGTGAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| CDS-3UTR CCA 90 bp | CTCAACATCCCTTTCAGTCCACTGAGATGCGTTCCTCAATGTATGCTGAGTGCCAAAATCCAGTGGTGCTaGCATTTGAATAATCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LNIPFSPLRCVPQCMLSAKIQWC*HLNNPW Trigger: CCACGGATTATTCAAATGCCAGCACCACTGGATTTT...GGCACTCAGCATACATTGAGGAACGCATCTCAGTGGACTGAAAGGGATGTTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR TCA 90 bp | GACAAAGACAAGAACAAAGATGTAAAAGATGAGGGCAAGCAGATGGCAGAAAGCGCACCCCTGCAGCTTTaGCAGCATCTTTTATTACGG | + |
|
Preference number: 4 (lower is better) Translates to: DKDKNKDVKDEGKQMAESAPLQL*QHLLLR Trigger: CCGTAATAAAAGATGCTGTCAAAGCTGCAGGGGTGC...GCTTTCTGCCATCTGCTTGCCCTCATCTTTTACATCTTTGTTCTTGTCTTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| CDS-3UTR GCA 90 bp | ACTCTGAGGCATAGCAATTATTTCTATGAACTGAAAAAGTCTTGCCAGCCTCTTACATTTTCTACCTTCTaGGCGCTGGAGCCTCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: TLRHSNYFYELKKSCQPLTFSTF*ALEPRT Trigger: AGTGCGAGGCTCCAGCGCGCAGAAGGTAGAAAATGT...AAGAGGCTGGCAAGACTTTTTCAGTTCATAGAAATAATTGCTATGCCTCAGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| CDS-3UTR CCA 90 bp | ATGCAGTTCAAAATGTCAATGTTGCAAGGTGTGGTGGTGCACACCTTTAACCCCAACCAAGGCAACAACTaGTATAGGCACGCCAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: MQFKMSMLQGVVVHTFNPNQGNN*YRHAKY Trigger: ATATTTGGCGTGCCTATACCAGTTGTTGCCTTGGTT...GGGGTTAAAGGTGTGCACCACCACACCTTGCAACATTGACATTTTGAACTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| CDS-3UTR CCA 90 bp | TTTGGGACAGTGGTAGTCCTTTCCTTGTTCAGAGATAAAACTGAAGCAAAGCCAATGTTCCAGTTCCCATaGTTAGCTTCACATCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: FGTVVVLSLFRDKTEAKPMFQFP*LASHLP Trigger: CGGGAGATGTGAAGCTAACCATGGGAACTGGAACAT...TGGCTTTGCTTCAGTTTTATCTCTGAACAAGGAAAGGACTACCACTGTCCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| CDS-3UTR CCA 90 bp | GACAAAGACAAGAACAAAGATGTAAAAGATGAGGGCAAGCAGATGGCAGAAAGCTTCGTGACGGGAATCTaGATTTCTCTCTGCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: DKDKNKDVKDEGKQMAESFVTGI*ISLCSM Trigger: CATGCTGCAGAGAGAAATCCAGATTCCCGTCACGAA...GCTTTCTGCCATCTGCTTGCCCTCATCTTTTACATCTTTGTTCTTGTCTTTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| CDS-3UTR CCA 90 bp | AAGGGACACAACCAACCAACACTTTTTCTTCATTACCGAGCAAAACCGAAACCGAAAATCCAGTGGTGCTaGCATTTGAATAATCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KGHNQPTLFLHYRAKPKPKIQWC*HLNNPW Trigger: CCACGGATTATTCAAATGCCAGCACCACTGGATTTT...CGGTTTCGGTTTTGCTCGGTAATGAAGAAAAAGTGTTGGTTGGTTGTGTCCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| CDS-3UTR CCA 90 bp | ACTCTGAGGCATAGCAATTATTTCTATGAACTGAAAAAGTCTTGCCAGCCTCTTCAGGACATGTCGAAGTaGGCAGGTCTGTCTATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TLRHSNYFYELKKSCQPLQDMSK*AGLSIF Trigger: GAAGATAGACAGACCTGCCCACTTCGACATGTCCTG...AAGAGGCTGGCAAGACTTTTTCAGTTCATAGAAATAATTGCTATGCCTCAGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| 3UTR CAA 72 bp | TATAACAGCCAGGTATCAATCGTCCCAAAGCAACAATaGTCTTCTTCAACTGCCCTTTTCACCTCAGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: YNSQVSIVPKQQ*SSSTALFTSDR Trigger: CCTATCTGAGGTGAAAAGGGCAGTTGAAGAAGACAATTGTTGCTTTGGGACGATTGATACCTGGCTGTTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| 3UTR CAA 72 bp | ATCTGGATTTCTCTCTGCAGCATGTCGTACAACTGTTaGTTCCTGAAAGCTATTGACTCCAATATTGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: IWISLCSMSYNC*FLKAIDSNIAR Trigger: CCGAGCAATATTGGAGTCAATAGCTTTCAGGAACAAACAGTTGTACGACATGCTGCAGAGAGAAATCCAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129774.2 |
||
| CDS-3UTR TCA 90 bp | AAGGGGACATTTATGCGAGCATTTCAACAAGTCAAGAAAGATAAAGAGCCAGGACTGAAGTCATCTGCATaGCGAAAGCGTTGTTACACA | + |
|
Preference number: 4 (lower is better) Translates to: KGTFMRAFQQVKKDKEPGLKSSA*RKRCYT Trigger: TGTGTAACAACGCTTTCGTCATGCAGATGACTTCAG...TCCTGGCTCTTTATCTTTCTTGACTTGTTGAAATGCTCGCATAAATGTCCCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR TCA 90 bp | TTTGGGACAGTGGTAGTCCTTTCCTTGTTCAGAGATAAAACTGAAGCAAAGCCACTCATTTATCAGGTCTaGAGTCATCTGCATGACGAA | + |
|
Preference number: 4 (lower is better) Translates to: FGTVVVLSLFRDKTEAKPLIYQV*SHLHDE Trigger: TTCGTCATGCAGATGACTTCAGACCTGATAAATGAG...TGGCTTTGCTTCAGTTTTATCTCTGAACAAGGAAAGGACTACCACTGTCCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| CDS-3UTR GCA 90 bp | AGTGTCCTTTGGAAATCGCCAGAAGAAAGAAGACTCAATTTTGAGGTCTTGCTGAGGTCTGAAGTCATCTaGATGACGAAAGCGTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SVLWKSPEERRLNFEVLLRSEVI*MTKALL Trigger: TAACAACGCTTTCGTCATGCAGATGACTTCAGACCT...CAGCAAGACCTCAAAATTGAGTCTTCTTTCTTCTGGCGATTTCCAAAGGACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR CCA 90 bp | TTCAAAATGTCAATGTTGCAAGGTGTGGTGGTGCACACCTTTAACCCCAGAACTATCCAAAATTATAGCTaGTATCCTTCACAGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FKMSMLQGVVVHTFNPRTIQNYS*YPSQEA Trigger: TGCCTCCTGTGAAGGATACCAGCTATAATTTTGGAT...AGTTCTGGGGTTAAAGGTGTGCACCACCACACCTTGCAACATTGACATTTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| CDS-3UTR TCA 90 bp | AAGGGACACAACCAACCAACACTTTTTCTTCATTACCGAGCAAAACCGAAACCGTATCTTCTCATCCACTaGTCCAAAATTATAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KGHNQPTLFLHYRAKPKPYLLIH*SKIIAG Trigger: ACCAGCTATAATTTTGGATCAGTGGATGAGAAGATA...CGGTTTCGGTTTTGCTCGGTAATGAAGAAAAAGTGTTGGTTGGTTGTGTCCCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| CDS-3UTR GCA 90 bp | AGTGTCCTTTGGAAATCGCCAGAAGAAAGAAGACTCAATTTTGAGGTCTTGCTGCTCTCTGTGTTGATATaGCAAGACCGACAATTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SVLWKSPEERRLNFEVLLLSVLI*QDRQFD Trigger: ATCAAATTGTCGGTCTTGGCATATCAACACAGAGAG...CAGCAAGACCTCAAAATTGAGTCTTCTTTCTTCTGGCGATTTCCAAAGGACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR GCA 90 bp | AAGGGACACAACCAACCAACACTTTTTCTTCATTACCGAGCAAAACCGAAACCGAAACATACAAGTTCTTaGCCAATCTTCCATCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: KGHNQPTLFLHYRAKPKPKHTSS*PIFHPI Trigger: AATTGGATGGAAGATTGGGCAAGAACTTGTATGTTT...CGGTTTCGGTTTTGCTCGGTAATGAAGAAAAAGTGTTGGTTGGTTGTGTCCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| CDS-3UTR GCA 90 bp | AGTGTCCTTTGGAAATCGCCAGAAGAAAGAAGACTCAATTTTGAGGTCTTGCTGAAACATACAAGTTCTTaGCCAATCTTCCATCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: SVLWKSPEERRLNFEVLLKHTSS*PIFHPI Trigger: AATTGGATGGAAGATTGGGCAAGAACTTGTATGTTT...CAGCAAGACCTCAAAATTGAGTCTTCTTTCTTCTGGCGATTTCCAAAGGACACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| 3UTR CAA 72 bp | CTACAGGAAATCTTAAGTAAAGTTGCCGTAGAAACCTaGTTTTTGTTCTTTTCACAGCATGAGCCTCACACT | + |
|
Preference number: 4 (lower is better) Translates to: LQEILSKVAVET*FLFFSQHEPHT Trigger: AGTGTGAGGCTCATGCTGTGAAAAGAACAAAAACAAGGTTTCTACGGCAACTTTACTTAAGATTTCCTGTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
||
| CDS GCA 90 bp | GCACTCGCGCCGTCTGGTCATAGACGTGGCAGCGGATCACCGTGCTaGCCACGTCCAGCCCCAGCACGAAGCGGGAGGGCGGCGAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: ALAPSGHRRGSGSPC*PRPAPARSGRAARP Trigger: CGGCCTCGCCGCCCTCCCGCTTCGTGCTGGGGCTGGACGTGGGCAGCACGGTGATCCGCTGCCACGTCTATGACCAGACGGCGCGAGTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085217.12 ENSMUST00000122383.3 ENSMUST00000129774.2 |
||
| CDS GCA 90 bp | CTCGCACTCGCGCCGTCTGGTCATAGACGTGGCAGCGGATCACCGTaGTGCCCACGTCCAGCCCCAGCACGAAGCGGGAGGGCGGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LALAPSGHRRGSGSP*CPRPAPARSGRAAR Trigger: CCTCGCCGCCCTCCCGCTTCGTGCTGGGGCTGGACGTGGGCAGCACGGTGATCCGCTGCCACGTCTATGACCAGACGGCGCGAGTGCGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085217.12 ENSMUST00000122383.3 ENSMUST00000129774.2 |
||
| CDS-3UTR CAA 90 bp | TCACTGCATCGTCTGGACAGGCTCCAAGCTCAAGCTCCCCTGGCCGCAGCCTCGGCCAAGACCGACAATTaGATTCATCTGCACCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLHRLDRLQAQAPLAAASAKTDN*IHLHPC Trigger: GCAGGGGTGCAGATGAATCAAATTGTCGGTCTTGGC...CGAGGCTGCGGCCAGGGGAGCTTGAGCTTGGAGCCTGTCCAGACGATGCAGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR CAA 90 bp | CTCGGCCACAGTCACACGGTGACCCCTGTGCAGCCCCCACCGGCACATCCTGTCTTCAACCCAGCCAGGTaGAGGGTAAACATTTTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: LGHSHTVTPVQPPPAHPVFNPAR*RVNIFY Trigger: GTAGAAAATGTTTACCCTCAACCTGGCTGGGTTGAA...GACAGGATGTGCCGGTGGGGGCTGCACAGGGGTCACCGTGTGACTGTGGCCGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR CAA 90 bp | CTCGGCCACAGTCACACGGTGACCCCTGTGCAGCCCCCACCGGCACATCCTGTCGTCCCAAAGCAACAATaGTCTTCTTCAACTGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LGHSHTVTPVQPPPAHPVVPKQQ*SSSTAL Trigger: AAGGGCAGTTGAAGAAGACAATTGTTGCTTTGGGAC...GACAGGATGTGCCGGTGGGGGCTGCACAGGGGTCACCGTGTGACTGTGGCCGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR CAA 90 bp | GCCTGGACTTCACTGCATCGTCTGGACAGGCTCCAAGCTCAAGCTCCCCTGGCCTGCACCCCTGCAGCTTaGACAGCATCTTTTATTACG | + |
|
Preference number: 5 (lower is better) Translates to: AWTSLHRLDRLQAQAPLACTPAA*TASFIT Trigger: CGTAATAAAAGATGCTGTCAAAGCTGCAGGGGTGCA...GGCCAGGGGAGCTTGAGCTTGGAGCCTGTCCAGACGATGCAGTGAAGTCCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR CAA 90 bp | TGGCCGCAGCCTCGAAAGTCCCCATATTTGCCACCATGCCCAGCCTCAACATCCCCCGTGTCTCCTGCATaGCCTTCAGCTAAACATACA | + |
|
Preference number: 5 (lower is better) Translates to: WPQPRKSPYLPPCPASTSPVSPA*PSAKHT Trigger: TGTATGTTTAGCTGAAGGCAATGCAGGAGACACGGG...GGATGTTGAGGCTGGGCATGGTGGCAAATATGGGGACTTTCGAGGCTGCGGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
||
| CDS-3UTR CAA 90 bp | CCACTGAGATGCGTTCCTCAATGTATGCTGAGTGCCCACCCAGGCACGATGGTGGAAAACCATCTCGCTTaGCCTCAGCTTCTGGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PLRCVPQCMLSAHPGTMVENHLA*PQLLEL Trigger: GAGCTCCAGAAGCTGAGGCAAAGCGAGATGGTTTTC...CACCATCGTGCCTGGGTGGGCACTCAGCATACATTGAGGAACGCATCTCAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
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| CDS-3UTR CAA 90 bp | AGCCTCACACTGTGTAATGAGCCCAGAAGTAAATGCCCTTCTGTTGGGCACACTCCCGTGTCTCCTGCATaGCCTTCAGCTAAACATACA | + |
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Preference number: 5 (lower is better) Translates to: SLTLCNEPRSKCPSVGHTPVSPA*PSAKHT Trigger: TGTATGTTTAGCTGAAGGCAATGCAGGAGACACGGG...AGTGTGCCCAACAGAAGGGCATTTACTTCTGGGCTCATTACACAGTGTGAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
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| CDS-3UTR CAA 90 bp | TACTGCCAAGCATCCCACTGTGTCCAGCATAGCATCCCAAAGCAAAGTCAGATGAAGTGGCTCTCTGTGTaGATATGCCAAGACCGACAA | + |
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Preference number: 5 (lower is better) Translates to: YCQASHCVQHSIPKQSQMKWLSV*ICQDRQ Trigger: TTGTCGGTCTTGGCATATCAACACAGAGAGCCACTT...CATCTGACTTTGCTTTGGGATGCTATGCTGGACACAGTGGGATGCTTGGCAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
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| CDS-3UTR CAA 90 bp | ACTCTAGAGACTAAAGTTGGGGGTTCAAGAGTTAGAAACTGGCATGGGCTAAACTGCTGGGTGCTGAAATaGAAGCGGCTGACCGTTAGC | + |
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Preference number: 5 (lower is better) Translates to: TLETKVGGSRVRNWHGLNCWVLK*KRLTVS Trigger: GCTAACGGTCAGCCGCTTCAATTTCAGCACCCAGCA...GTTTAGCCCATGCCAGTTTCTAACTCTTGAACCCCCAACTTTAGTCTCTAGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
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| CDS-3UTR CAA 90 bp | AAGGGACACAACCAACCAACACTTTTTCTTCATTACCGAGCAAAACCGAAACCGTGCTGGGTGCTGAAATaGAAGCGGCTGACCGTTAGC | + |
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Preference number: 5 (lower is better) Translates to: KGHNQPTLFLHYRAKPKPCWVLK*KRLTVS Trigger: GCTAACGGTCAGCCGCTTCAATTTCAGCACCCAGCA...CGGTTTCGGTTTTGCTCGGTAATGAAGAAAAAGTGTTGGTTGGTTGTGTCCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
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| CDS-3UTR CAA 90 bp | CAGTGGTTCTCAAATGACAATGATTTTTGCCTCCCAGGATGGCCAATGTTGGCAGAAAACCATCTCGCTTaGCCTCAGCTTCTGGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: QWFSNDNDFCLPGWPMLAENHLA*PQLLEL Trigger: GAGCTCCAGAAGCTGAGGCAAAGCGAGATGGTTTTC...TGCCAACATTGGCCATCCTGGGAGGCAAAAATCATTGTCATTTGAGAACCACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
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| CDS-3UTR CAA 90 bp | AGCCTCACACTGTGTAATGAGCCCAGAAGTAAATGCCCTTCTGTTGGGCACACTTTCAACCCAGCCAGGTaGAGGGTAAACATTTTCTAC | + |
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Preference number: 5 (lower is better) Translates to: SLTLCNEPRSKCPSVGHTFNPAR*RVNIFY Trigger: GTAGAAAATGTTTACCCTCAACCTGGCTGGGTTGAA...AGTGTGCCCAACAGAAGGGCATTTACTTCTGGGCTCATTACACAGTGTGAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
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| CDS-3UTR CAA 90 bp | TACTGCCAAGCATCCCACTGTGTCCAGCATAGCATCCCAAAGCAAAGTCAGATGGTCCCAAAGCAACAATaGTCTTCTTCAACTGCCCTT | + |
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Preference number: 5 (lower is better) Translates to: YCQASHCVQHSIPKQSQMVPKQQ*SSSTAL Trigger: AAGGGCAGTTGAAGAAGACAATTGTTGCTTTGGGAC...CATCTGACTTTGCTTTGGGATGCTATGCTGGACACAGTGGGATGCTTGGCAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
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| CDS TCA 90 bp | AGTTTTCCATATTCACCTCGTATTCCTGCCACTTCTTCTGAGGCTTaGAAACCATCTCGCTTTGCCTCAGCTTCTGGAGCTCTTCCTTGT | + |
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Preference number: 5 (lower is better) Translates to: SFPYSPRIPATSSEA*KPSRFASASGALPC Trigger: ACAAGGAAGAGCTCCAGAAGCTGAGGCAAAGCGAGATGGTTTTCAAGCCTCAGAAGAAGTGGCAGGAATACGAGGTGAATATGGAAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
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| CDS TCA 90 bp | TTTACCCAGTTTTCCATATTCACCTCGTATTCCTGCCACTTCTTCTaGGGCTTGAAAACCATCTCGCTTTGCCTCAGCTTCTGGAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: FTQFSIFTSYSCHFF*GLKTISLCLSFWSS Trigger: AGAGCTCCAGAAGCTGAGGCAAAGCGAGATGGTTTTCAAGCCTCAGAAGAAGTGGCAGGAATACGAGGTGAATATGGAAAACTGGGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
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| CDS-3UTR CAA 90 bp | GTGTTAAGTTCTGTGGGGAGCAAACGTGGCTTTGGCTTCAGGAAGCATCGAGTGCTATTGACTCCAATATaGCTCGGACAAGATGGTATT | + |
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Preference number: 5 (lower is better) Translates to: VLSSVGSKRGFGFRKHRVLLTPI*LGQDGI Trigger: AATACCATCTTGTCCGAGCAATATTGGAGTCAATAG...CACTCGATGCTTCCTGAAGCCAAAGCCACGTTTGCTCCCCACAGAACTTAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
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| CDS TCA 90 bp | ATGGCCTGTTTTCTTGTTCCATGTAATGAAAGTGGCTCTCTGTGTTaGTATGCCAAGACCGACAATTTGATTCATCTGCACCCCTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: MACFLVPCNESGSLC*YAKTDNLIHLHPCS Trigger: GCTGCAGGGGTGCAGATGAATCAAATTGTCGGTCTTGGCATATCAACACAGAGAGCCACTTTCATTACATGGAACAAGAAAACAGGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085217.12 ENSMUST00000122383.3 |
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| CDS-3UTR CAA 90 bp | ACTCTAGAGACTAAAGTTGGGGGTTCAAGAGTTAGAAACTGGCATGGGCTAAACAAGTGGCTCTCTGTGTaGATATGCCAAGACCGACAA | + |
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Preference number: 5 (lower is better) Translates to: TLETKVGGSRVRNWHGLNKWLSV*ICQDRQ Trigger: TTGTCGGTCTTGGCATATCAACACAGAGAGCCACTT...GTTTAGCCCATGCCAGTTTCTAACTCTTGAACCCCCAACTTTAGTCTCTAGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
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| CDS-3UTR CAA 90 bp | AGCCTCACACTGTGTAATGAGCCCAGAAGTAAATGCCCTTCTGTTGGGCACACTATGTCGTACAACTGTTaGTTCCTGAAAGCTATTGAC | + |
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Preference number: 5 (lower is better) Translates to: SLTLCNEPRSKCPSVGHTMSYNC*FLKAID Trigger: GTCAATAGCTTTCAGGAACAAACAGTTGTACGACAT...AGTGTGCCCAACAGAAGGGCATTTACTTCTGGGCTCATTACACAGTGTGAGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
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| CDS-3UTR CAA 90 bp | GACAAAGACAAGAACAAAGATGTAAAAGATGAGGGCAAGCAGATGGCAGAAAGCTGCACCCCTGCAGCTTaGACAGCATCTTTTATTACG | + |
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Preference number: 5 (lower is better) Translates to: DKDKNKDVKDEGKQMAESCTPAA*TASFIT Trigger: CGTAATAAAAGATGCTGTCAAAGCTGCAGGGGTGCA...GCTTTCTGCCATCTGCTTGCCCTCATCTTTTACATCTTTGTTCTTGTCTTTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000122383.3 |
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| CDS TCA 90 bp | GTAATGAAAGTGGCTCTCTGTGTTGATATGCCAAGACCGACAATTTaGTTCATCTGCACCCCTGCAGCTTTGACAGCATCTTTTATTACG | + |
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Preference number: 5 (lower is better) Translates to: VMKVALCVDMPRPTI*FICTPAALTASFIT Trigger: CGTAATAAAAGATGCTGTCAAAGCTGCAGGGGTGCAGATGAATCAAATTGTCGGTCTTGGCATATCAACACAGAGAGCCACTTTCATTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085217.12 ENSMUST00000122383.3 |
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| CDS-3UTR CAA 90 bp | AGTGTCCTTTGGAAATCGCCAGAAGAAAGAAGACTCAATTTTGAGGTCTTGCTGCTATTGACTCCAATATaGCTCGGACAAGATGGTATT | + |
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Preference number: 5 (lower is better) Translates to: SVLWKSPEERRLNFEVLLLLTPI*LGQDGI Trigger: AATACCATCTTGTCCGAGCAATATTGGAGTCAATAG...CAGCAAGACCTCAAAATTGAGTCTTCTTTCTTCTGGCGATTTCCAAAGGACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
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| CDS-3UTR CAA 90 bp | AAGGGGACATTTATGCGAGCATTTCAACAAGTCAAGAAAGATAAAGAGCCAGGAATGTCGTACAACTGTTaGTTCCTGAAAGCTATTGAC | + |
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Preference number: 5 (lower is better) Translates to: KGTFMRAFQQVKKDKEPGMSYNC*FLKAID Trigger: GTCAATAGCTTTCAGGAACAAACAGTTGTACGACAT...TCCTGGCTCTTTATCTTTCTTGACTTGTTGAAATGCTCGCATAAATGTCCCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
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| CDS GCA 72 bp | CCGTCTGGTCATAGACGTGGCAGCGGATCACCGTGCTaGCCACGTCCAGCCCCAGCACGAAGCGGGAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: PSGHRRGSGSPC*PRPAPARSGRA Trigger: CGCCCTCCCGCTTCGTGCTGGGGCTGGACGTGGGCAGCACGGTGATCCGCTGCCACGTCTATGACCAGACGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085217.12 ENSMUST00000122383.3 ENSMUST00000129774.2 |
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| CDS GCA 72 bp | GCGCCGTCTGGTCATAGACGTGGCAGCGGATCACCGTaGTGCCCACGTCCAGCCCCAGCACGAAGCGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: APSGHRRGSGSP*CPRPAPARSGR Trigger: CCTCCCGCTTCGTGCTGGGGCTGGACGTGGGCAGCACGGTGATCCGCTGCCACGTCTATGACCAGACGGCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085217.12 ENSMUST00000122383.3 ENSMUST00000129774.2 |
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| CDS CCA 72 bp | CAGGTTGAGGGTAAACATTTTCTACCTTCTGCGCGCTaGAGCCTCGCACTCGCGCCGTCTGGTCATAGACGT | + |
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Preference number: 6 (lower is better) Translates to: QVEGKHFLPSAR*SLALAPSGHRR Trigger: ACGTCTATGACCAGACGGCGCGAGTGCGAGGCTCCAGCGCGCAGAAGGTAGAAAATGTTTACCCTCAACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085217.12 ENSMUST00000122383.3 |
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| CDS CAA 90 bp | AAACTGAGCCCAGAGAGAATCAGGATCGATTTCAACCCAGCCAGGTaGAGGGTAAACATTTTCTACCTTCTGCGCGCTGGAGCCTCGCAC | + |
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Preference number: 6 (lower is better) Translates to: KLSPERIRIDFNPAR*RVNIFYLLRAGASH Trigger: GTGCGAGGCTCCAGCGCGCAGAAGGTAGAAAATGTTTACCCTCAACCTGGCTGGGTTGAAATCGATCCTGATTCTCTCTGGGCTCAGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085217.12 ENSMUST00000122383.3 |
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| CDS CAA 72 bp | CCAGAGAGAATCAGGATCGATTTCAACCCAGCCAGGTaGAGGGTAAACATTTTCTACCTTCTGCGCGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: PERIRIDFNPAR*RVNIFYLLRAG Trigger: TCCAGCGCGCAGAAGGTAGAAAATGTTTACCCTCAACCTGGCTGGGTTGAAATCGATCCTGATTCTCTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085217.12 ENSMUST00000122383.3 |
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| CDS TCA 72 bp | GTGGCTCTCTGTGTTGATATGCCAAGACCGACAATTTaGTTCATCTGCACCCCTGCAGCTTTGACAGCATCT | + |
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Preference number: 6 (lower is better) Translates to: VALCVDMPRPTI*FICTPAALTAS Trigger: AGATGCTGTCAAAGCTGCAGGGGTGCAGATGAATCAAATTGTCGGTCTTGGCATATCAACACAGAGAGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085217.12 ENSMUST00000122383.3 |
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| CDS TCA 72 bp | TTTTCCATATTCACCTCGTATTCCTGCCACTTCTTCTaGGGCTTGAAAACCATCTCGCTTTGCCTCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: FSIFTSYSCHFF*GLKTISLCLSF Trigger: GAAGCTGAGGCAAAGCGAGATGGTTTTCAAGCCTCAGAAGAAGTGGCAGGAATACGAGGTGAATATGGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085217.12 |
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| CDS TCA 72 bp | TTTCTTGTTCCATGTAATGAAAGTGGCTCTCTGTGTTaGTATGCCAAGACCGACAATTTGATTCATCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: FLVPCNESGSLC*YAKTDNLIHLH Trigger: GTGCAGATGAATCAAATTGTCGGTCTTGGCATATCAACACAGAGAGCCACTTTCATTACATGGAACAAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085217.12 ENSMUST00000122383.3 |
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