Pregenerated sensors for GJD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068615Ensembl transcript IDs: ENSMUST00000090275.5
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTCATGCCATTCACCAGAATACAGAGCTCAGCAGAGCTAATTCTTaGTTGGCAGCTATGCCAGTTCACTATGATCAGGAGCAGGAAGGG | + |
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Preference number: 1 (lower is better) Translates to: THAIHQNTELSRANS*LAAMPVHYDQEQEG Trigger: CCCTTCCTGCTCCTGATCATAGTGAACTGGCATAGCTGCCAAGCAAGAATTAGCTCTGCTGAGCTCTGTATTCTGGTGAATGGCATGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| 3UTR GCA 90 bp | GAAATAGAGGGCTTCCATAAAAACATATTATCTCAATGCTACTCTTaGCTAGTGCTTCAGCTAAATGCACAGTGGGCAGGAAAGGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: EIEGFHKNILSQCYS*LVLQLNAQWAGKEE Trigger: TTCCTCCTTTCCTGCCCACTGTGCATTTAGCTGAAGCACTAGGCAAGAGTAGCATTGAGATAATATGTTTTTATGGAAGCCCTCTATTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| 3UTR GCA 90 bp | GATTCAAATGAAATAGAGGGCTTCCATAAAAACATATTATCTCAATaGTACTCTTGCCTAGTGCTTCAGCTAAATGCACAGTGGGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: DSNEIEGFHKNILSQ*YSCLVLQLNAQWAG Trigger: TCCTGCCCACTGTGCATTTAGCTGAAGCACTAGGCAAGAGTAGCATTGAGATAATATGTTTTTATGGAAGCCCTCTATTTCATTTGAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| 3UTR CAA 90 bp | CATGCCATTCACCAGAATACAGAGCTCAGCAGAGCTAATTCTTGCTaGGCAGCTATGCCAGTTCACTATGATCAGGAGCAGGAAGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: HAIHQNTELSRANSC*AAMPVHYDQEQEGP Trigger: TGGCCCTTCCTGCTCCTGATCATAGTGAACTGGCATAGCTGCCAAGCAAGAATTAGCTCTGCTGAGCTCTGTATTCTGGTGAATGGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| 3UTR CAA 90 bp | GCCCTGGCTAGTCTCCAAAAAGCACCCCACGTAATTCCCTCTAGCTaGCAGATAAACTGTGTTAGGGCTAATGTAAGGCCAGATCAAGGA | + |
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Preference number: 2 (lower is better) Translates to: ALASLQKAPHVIPSS*QINCVRANVRPDQG Trigger: TCCTTGATCTGGCCTTACATTAGCCCTAACACAGTTTATCTGCAAGCTAGAGGGAATTACGTGGGGTGCTTTTTGGAGACTAGCCAGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| 3UTR-3UTR GCA 90 bp | CTCTGGTGTGAGCACACAGGTAAGTTCAAACCATGGCAAAATGATGTGCAGCTGAGCAGAGCTAATTCTTaGTTGGCAGCTATGCCAGTT | + |
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Preference number: 2 (lower is better) Translates to: LWCEHTGKFKPWQNDVQLSRANS*LAAMPV Trigger: AACTGGCATAGCTGCCAAGCAAGAATTAGCTCTGCT...CAGCTGCACATCATTTTGCCATGGTTTGAACTTACCTGTGTGCTCACACCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| 3UTR-3UTR CCA 90 bp | CTCTGGTGTGAGCACACAGGTAAGTTCAAACCATGGCAAAATGATGTGCAGCTGGAGCTAATTCTTGCTTaGCAGCTATGCCAGTTCACT | + |
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Preference number: 2 (lower is better) Translates to: LWCEHTGKFKPWQNDVQLELILA*QLCQFT Trigger: AGTGAACTGGCATAGCTGCCAAGCAAGAATTAGCTC...CAGCTGCACATCATTTTGCCATGGTTTGAACTTACCTGTGTGCTCACACCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| 3UTR-3UTR GCA 90 bp | GCTTCAGCTAAATGCACAGTGGGCAGGAAAGGAGGAATATGGCACTTAAATGAACTTGCTTGGCAGCTATaGCAGTTCACTATGATCAGG | + |
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Preference number: 2 (lower is better) Translates to: ASAKCTVGRKGGIWHLNELAWQL*QFTMIR Trigger: CCTGATCATAGTGAACTGGCATAGCTGCCAAGCAAG...TTCATTTAAGTGCCATATTCCTCCTTTCCTGCCCACTGTGCATTTAGCTGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| 3UTR-3UTR TCA 90 bp | CTCTGGTGTGAGCACACAGGTAAGTTCAAACCATGGCAAAATGATGTGCAGCTGGATAAGGGTATGTGCTaGGATGGGTCACAAATTTTA | + |
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Preference number: 2 (lower is better) Translates to: LWCEHTGKFKPWQNDVQLDKGMC*DGSQIL Trigger: TAAAATTTGTGACCCATCTCAGCACATACCCTTATC...CAGCTGCACATCATTTTGCCATGGTTTGAACTTACCTGTGTGCTCACACCAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| 3UTR-3UTR GCA 90 bp | TTTTTAATTCTATCCACAGTCCATAATCTAGAAGGCAGAAATATCCCAAAGCTCCATATGGGGCTCTACTaGAAACCTCTGCCCTGGCTA | + |
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Preference number: 2 (lower is better) Translates to: FLILSTVHNLEGRNIPKLHMGLY*KPLPWL Trigger: TAGCCAGGGCAGAGGTTTGCAGTAGAGCCCCATATG...GAGCTTTGGGATATTTCTGCCTTCTAGATTATGGACTGTGGATAGAATTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| 3UTR GCA 72 bp | CAGAGCTCAGCAGAGCTAATTCTTGCTTGGCAGCTATaGCAGTTCACTATGATCAGGAGCAGGAAGGGCCAT | + |
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Preference number: 3 (lower is better) Translates to: QSSAELILAWQL*QFTMIRSRKGH Trigger: ATGGCCCTTCCTGCTCCTGATCATAGTGAACTGGCATAGCTGCCAAGCAAGAATTAGCTCTGCTGAGCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| 3UTR-3UTR CAA 90 bp | GTCTCTGGTGTGAGCACACAGGTAAGTTCAAACCATGGCAAAATGATGTGCAGCAGAGCTAATTCTTGCTaGGCAGCTATGCCAGTTCAC | + |
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Preference number: 3 (lower is better) Translates to: VSGVSTQVSSNHGKMMCSRANSC*AAMPVH Trigger: GTGAACTGGCATAGCTGCCAAGCAAGAATTAGCTCT...GCTGCACATCATTTTGCCATGGTTTGAACTTACCTGTGTGCTCACACCAGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| 3UTR-3UTR CAA 90 bp | TCTCAATGCTACTCTTGCCTAGTGCTTCAGCTAAATGCACAGTGGGCAGGAAAGGTAATTCCCTCTAGCTaGCAGATAAACTGTGTTAGG | + |
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Preference number: 3 (lower is better) Translates to: SQCYSCLVLQLNAQWAGKVIPSS*QINCVR Trigger: CCTAACACAGTTTATCTGCAAGCTAGAGGGAATTAC...CTTTCCTGCCCACTGTGCATTTAGCTGAAGCACTAGGCAAGAGTAGCATTGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| 3UTR GCA 72 bp | ATTCACCAGAATACAGAGCTCAGCAGAGCTAATTCTTaGTTGGCAGCTATGCCAGTTCACTATGATCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: IHQNTELSRANS*LAAMPVHYDQE Trigger: CTCCTGATCATAGTGAACTGGCATAGCTGCCAAGCAAGAATTAGCTCTGCTGAGCTCTGTATTCTGGTGAAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| 3UTR TCA 72 bp | CACAGTGGGCAGGAAAGGAGGAATATGGCACTTAAATaGATAAGAGCAACGAGAGGAAAATTGTCTCAGTCC | + |
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Preference number: 3 (lower is better) Translates to: HSGQERRNMALK*IRATRGKLSQS Trigger: GGACTGAGACAATTTTCCTCTCGTTGCTCTTATTCATTTAAGTGCCATATTCCTCCTTTCCTGCCCACTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| 3UTR GCA 72 bp | GGCTTCCATAAAAACATATTATCTCAATGCTACTCTTaGCTAGTGCTTCAGCTAAATGCACAGTGGGCAGGA | + |
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Preference number: 3 (lower is better) Translates to: GFHKNILSQCYS*LVLQLNAQWAG Trigger: TCCTGCCCACTGTGCATTTAGCTGAAGCACTAGGCAAGAGTAGCATTGAGATAATATGTTTTTATGGAAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| 3UTR-3UTR CAA 90 bp | GCTTCAGCTAAATGCACAGTGGGCAGGAAAGGAGGAATATGGCACTTAAATGAATATATCAATGAGTGTTaGACTCATGCCATTCACCAG | + |
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Preference number: 3 (lower is better) Translates to: ASAKCTVGRKGGIWHLNEYINEC*THAIHQ Trigger: CTGGTGAATGGCATGAGTCAAACACTCATTGATATA...TTCATTTAAGTGCCATATTCCTCCTTTCCTGCCCACTGTGCATTTAGCTGAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| 3UTR TCA 72 bp | TATCCCAAAGCTCATAAACACATGCTCAACGGTGAGTaGAATGACCATCTCATAAGTGGTGTTGAAATTCCC | + |
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Preference number: 3 (lower is better) Translates to: YPKAHKHMLNGE*NDHLISGVEIP Trigger: GGGAATTTCAACACCACTTATGAGATGGTCATTTCACTCACCGTTGAGCATGTGTTTATGAGCTTTGGGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR CCA 90 bp | TCAGGAGCAGGAAGGGCCATTAAAAGAAGAAGGCCCAAGAATGTCCAGCTTAGCGACTTCCTCTTGGCCTaGGCTCCCCGGACAGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: SGAGRAIKRRRPKNVQLSDFLLA*APRTAS Trigger: ACTGGCTGTCCGGGGAGCCCAGGCCAAGAGGAAGTC...GCTAAGCTGGACATTCTTGGGCCTTCTTCTTTTAATGGCCCTTCCTGCTCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR CCA 90 bp | TCAGGAGCAGGAAGGGCCATTAAAAGAAGAAGGCCCAAGAATGTCCAGCTTAGCAGACTGACTTCCTCTTaGCCTGGGCTCCCCGGACAG | + |
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Preference number: 4 (lower is better) Translates to: SGAGRAIKRRRPKNVQLSRLTSS*PGLPGQ Trigger: CTGTCCGGGGAGCCCAGGCCAAGAGGAAGTCAGTCT...GCTAAGCTGGACATTCTTGGGCCTTCTTCTTTTAATGGCCCTTCCTGCTCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR GCA 90 bp | TCTCAATGCTACTCTTGCCTAGTGCTTCAGCTAAATGCACAGTGGGCAGGAAAGATAGTGGAGTGCTGCTaGACCGCGGCTTCCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SQCYSCLVLQLNAQWAGKIVECC*TAASSS Trigger: GCTGCTGGAAGCCGCGGTGCAGCAGCACTCCACTAT...CTTTCCTGCCCACTGTGCATTTAGCTGAAGCACTAGGCAAGAGTAGCATTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR GCA 90 bp | TCAGGAGCAGGAAGGGCCATTAAAAGAAGAAGGCCCAAGAATGTCCAGCTTAGCTACCGGCGTTCTCGCTaGTTGGCGGATTGGTGCACA | + |
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Preference number: 4 (lower is better) Translates to: SGAGRAIKRRRPKNVQLSYRRSR*LADWCT Trigger: TGTGCACCAATCCGCCAAGCAGCGAGAACGCCGGTA...GCTAAGCTGGACATTCTTGGGCCTTCTTCTTTTAATGGCCCTTCCTGCTCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR GCA 90 bp | GTCTCTGGTGTGAGCACACAGGTAAGTTCAAACCATGGCAAAATGATGTGCAGCTCGGAGCTTGGACCTTaGTGCTGTGCGCAGCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: VSGVSTQVSSNHGKMMCSSELGP*CCAQPR Trigger: TCTGGGCTGCGCACAGCAGCAAGGTCCAAGCTCCGA...GCTGCACATCATTTTGCCATGGTTTGAACTTACCTGTGTGCTCACACCAGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR GCA 90 bp | GTCTCTGGTGTGAGCACACAGGTAAGTTCAAACCATGGCAAAATGATGTGCAGCCCAATCATAGTGGAGTaGTGCTGCACCGCGGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: VSGVSTQVSSNHGKMMCSPIIVE*CCTAAS Trigger: GGAAGCCGCGGTGCAGCAGCACTCCACTATGATTGG...GCTGCACATCATTTTGCCATGGTTTGAACTTACCTGTGTGCTCACACCAGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR GCA 90 bp | TCAGGAGCAGGAAGGGCCATTAAAAGAAGAAGGCCCAAGAATGTCCAGCTTAGCTCTTATCTTCTCGTTTaGTCCCTCCGCTGCCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: SGAGRAIKRRRPKNVQLSSYLLV*SLRCPH Trigger: GTGGGGGCAGCGGAGGGAGCAAACGAGAAGATAAGA...GCTAAGCTGGACATTCTTGGGCCTTCTTCTTTTAATGGCCCTTCCTGCTCCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR GCA 90 bp | CTCTGGTGTGAGCACACAGGTAAGTTCAAACCATGGCAAAATGATGTGCAGCTGTGGACCTTGCTGCTGTaGGCAGCCCAGATGGATGTG | + |
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Preference number: 4 (lower is better) Translates to: LWCEHTGKFKPWQNDVQLWTLLL*AAQMDV Trigger: CACATCCATCTGGGCTGCGCACAGCAGCAAGGTCCA...CAGCTGCACATCATTTTGCCATGGTTTGAACTTACCTGTGTGCTCACACCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR TCA 90 bp | GCTTCAGCTAAATGCACAGTGGGCAGGAAAGGAGGAATATGGCACTTAAATGAACCCGGACAGCCAGTTTaGTCTTCCGCCATCCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: ASAKCTVGRKGGIWHLNEPGQPV*SSAIPD Trigger: ATCTGGGATGGCGGAAGATCAAACTGGCTGTCCGGG...TTCATTTAAGTGCCATATTCCTCCTTTCCTGCCCACTGTGCATTTAGCTGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR TCA 90 bp | CTCTGGTGTGAGCACACAGGTAAGTTCAAACCATGGCAAAATGATGTGCAGCTGACGTATCTCATAGACTaGCTTCCTCTTGGCCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: LWCEHTGKFKPWQNDVQLTYLID*LPLGLG Trigger: GCCCAGGCCAAGAGGAAGTCAGTCTATGAGATACGT...CAGCTGCACATCATTTTGCCATGGTTTGAACTTACCTGTGTGCTCACACCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR TCA 90 bp | ACAGAGCTCAGCAGAGCTAATTCTTGCTTGGCAGCTATGCCAGTTCACTATGATGCAGAGTCACTGGACTaGGTCCTGCCGAAATTGGGA | + |
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Preference number: 4 (lower is better) Translates to: TELSRANSCLAAMPVHYDAESLD*VLPKLG Trigger: TCCCAATTTCGGCAGGACTCAGTCCAGTGACTCTGC...ATCATAGTGAACTGGCATAGCTGCCAAGCAAGAATTAGCTCTGCTGAGCTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR GCA 90 bp | GCTTCAGCTAAATGCACAGTGGGCAGGAAAGGAGGAATATGGCACTTAAATGAAATCATAGTGGAGTGCTaGTGCACCGCGGCTTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: ASAKCTVGRKGGIWHLNEIIVEC*CTAASS Trigger: GCTGGAAGCCGCGGTGCAGCAGCACTCCACTATGAT...TTCATTTAAGTGCCATATTCCTCCTTTCCTGCCCACTGTGCATTTAGCTGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR TCA 90 bp | TCAGGAGCAGGAAGGGCCATTAAAAGAAGAAGGCCCAAGAATGTCCAGCTTAGCGAAACACCACTTGGATaGTGTAGAAGCGGGAGATAC | + |
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Preference number: 4 (lower is better) Translates to: SGAGRAIKRRRPKNVQLSETPLG*CRSGRY Trigger: GTATCTCCCGCTTCTACATCATCCAAGTGGTGTTTC...GCTAAGCTGGACATTCTTGGGCCTTCTTCTTTTAATGGCCCTTCCTGCTCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR GCA 90 bp | ACAGAGCTCAGCAGAGCTAATTCTTGCTTGGCAGCTATGCCAGTTCACTATGATCGGGCTGTAGGGTGTTaGACACAAACATGGTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: TELSRANSCLAAMPVHYDRAVGC*TQTWSA Trigger: AGCAGACCATGTTTGTGTGCAACACCCTACAGCCCG...ATCATAGTGAACTGGCATAGCTGCCAAGCAAGAATTAGCTCTGCTGAGCTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| 3UTR CAA 72 bp | CACCAGAATACAGAGCTCAGCAGAGCTAATTCTTGCTaGGCAGCTATGCCAGTTCACTATGATCAGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: HQNTELSRANSC*AAMPVHYDQEQ Trigger: CTGCTCCTGATCATAGTGAACTGGCATAGCTGCCAAGCAAGAATTAGCTCTGCTGAGCTCTGTATTCTGGTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR TCA 90 bp | CTCTGGTGTGAGCACACAGGTAAGTTCAAACCATGGCAAAATGATGTGCAGCTGCTACAATGGCCACAATaGGTATCCGGAAGATCACCA | + |
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Preference number: 4 (lower is better) Translates to: LWCEHTGKFKPWQNDVQLLQWPQ*VSGRSP Trigger: TGGTGATCTTCCGGATACTCATTGTGGCCATTGTAG...CAGCTGCACATCATTTTGCCATGGTTTGAACTTACCTGTGTGCTCACACCAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR TCA 90 bp | GTCTCTGGTGTGAGCACACAGGTAAGTTCAAACCATGGCAAAATGATGTGCAGCTCTGCAGCACCCCATTaGCAATGGCATTTTGCAACT | + |
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Preference number: 4 (lower is better) Translates to: VSGVSTQVSSNHGKMMCSSAAPH*QWHFAT Trigger: AGTTGCAAAATGCCATTGTCAATGGGGTGCTGCAGA...GCTGCACATCATTTTGCCATGGTTTGAACTTACCTGTGTGCTCACACCAGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR GCA 90 bp | ACAGAGCTCAGCAGAGCTAATTCTTGCTTGGCAGCTATGCCAGTTCACTATGATGTGGTCTCTGTGTTCTaGAGCACCCCATTGACAATG | + |
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Preference number: 4 (lower is better) Translates to: TELSRANSCLAAMPVHYDVVSVF*STPLTM Trigger: CATTGTCAATGGGGTGCTGCAGAACACAGAGACCAC...ATCATAGTGAACTGGCATAGCTGCCAAGCAAGAATTAGCTCTGCTGAGCTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR CCA 90 bp | ACAGAGCTCAGCAGAGCTAATTCTTGCTTGGCAGCTATGCCAGTTCACTATGATAACGTATATGGGAGATaGGAAAGGCGCGGTCATAGC | + |
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Preference number: 4 (lower is better) Translates to: TELSRANSCLAAMPVHYDNVYGR*ERRGHS Trigger: GCTATGACCGCGCCTTTCCCATCTCCCATATACGTT...ATCATAGTGAACTGGCATAGCTGCCAAGCAAGAATTAGCTCTGCTGAGCTCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR CCA 90 bp | GTCTCTGGTGTGAGCACACAGGTAAGTTCAAACCATGGCAAAATGATGTGCAGCGTTCTGTCTCCTTACTaGTGGTCTCTGTGTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: VSGVSTQVSSNHGKMMCSVLSPY*WSLCSA Trigger: TGCAGAACACAGAGACCACCAGTAAGGAGACAGAAC...GCTGCACATCATTTTGCCATGGTTTGAACTTACCTGTGTGCTCACACCAGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR CCA 90 bp | ACAGAGCTCAGCAGAGCTAATTCTTGCTTGGCAGCTATGCCAGTTCACTATGATCAGCCCAGATGGATGTaGAGTCAGCTCTTTAACCTC | + |
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Preference number: 4 (lower is better) Translates to: TELSRANSCLAAMPVHYDQPRWM*SQLFNL Trigger: GAGGTTAAAGAGCTGACTCCACATCCATCTGGGCTG...ATCATAGTGAACTGGCATAGCTGCCAAGCAAGAATTAGCTCTGCTGAGCTCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR TCA 90 bp | GTCTCTGGTGTGAGCACACAGGTAAGTTCAAACCATGGCAAAATGATGTGCAGCACAACCCTGGAACACTaGAGCCATATAGAAAGTACT | + |
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Preference number: 4 (lower is better) Translates to: VSGVSTQVSSNHGKMMCSTTLEH*SHIEST Trigger: AGTACTTTCTATATGGCTTCAGTGTTCCAGGGTTGT...GCTGCACATCATTTTGCCATGGTTTGAACTTACCTGTGTGCTCACACCAGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR TCA 90 bp | GCTTCAGCTAAATGCACAGTGGGCAGGAAAGGAGGAATATGGCACTTAAATGAACGCTCACAGCAAACATaGACACCAGAAAGACTGTCT | + |
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Preference number: 4 (lower is better) Translates to: ASAKCTVGRKGGIWHLNERSQQT*TPERLS Trigger: AGACAGTCTTTCTGGTGTTCATGTTTGCTGTGAGCG...TTCATTTAAGTGCCATATTCCTCCTTTCCTGCCCACTGTGCATTTAGCTGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR CCA 90 bp | CTCTGGTGTGAGCACACAGGTAAGTTCAAACCATGGCAAAATGATGTGCAGCTGTGTTGCACACAAACATaGTCTGCTCATCATCGTACA | + |
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Preference number: 4 (lower is better) Translates to: LWCEHTGKFKPWQNDVQLCCTQT*SAHHRT Trigger: TGTACGATGATGAGCAGACCATGTTTGTGTGCAACA...CAGCTGCACATCATTTTGCCATGGTTTGAACTTACCTGTGTGCTCACACCAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR CCA 90 bp | TTTTTAATTCTATCCACAGTCCATAATCTAGAAGGCAGAAATATCCCAAAGCTCCCTGTCTTCGGAGCTTaGACCTTGCTGCTGTGCGCA | + |
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Preference number: 4 (lower is better) Translates to: FLILSTVHNLEGRNIPKLPVFGA*TLLLCA Trigger: TGCGCACAGCAGCAAGGTCCAAGCTCCGAAGACAGG...GAGCTTTGGGATATTTCTGCCTTCTAGATTATGGACTGTGGATAGAATTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| 3UTR CAA 72 bp | AAAGAAGAAGGCCCAAGAATGTCCAGCTTAGCCATCTaGTCACTCTACCCAATGGTTTCTGTAGAACTGATG | + |
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Preference number: 4 (lower is better) Translates to: KEEGPRMSSLAI*SLYPMVSVELM Trigger: CATCAGTTCTACAGAAACCATTGGGTAGAGTGACAAGATGGCTAAGCTGGACATTCTTGGGCCTTCTTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR CCA 90 bp | TTTTTAATTCTATCCACAGTCCATAATCTAGAAGGCAGAAATATCCCAAAGCTCGGCGTTCTCGCTGCTTaGCGGATTGGTGCACAGAAT | + |
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Preference number: 4 (lower is better) Translates to: FLILSTVHNLEGRNIPKLGVLAA*RIGAQN Trigger: ATTCTGTGCACCAATCCGCCAAGCAGCGAGAACGCC...GAGCTTTGGGATATTTCTGCCTTCTAGATTATGGACTGTGGATAGAATTAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR GCA 90 bp | GTCTCTGGTGTGAGCACACAGGTAAGTTCAAACCATGGCAAAATGATGTGCAGCTTGACAATGGCATTTTaGAACTTCTTATCTTCTCGT | + |
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Preference number: 4 (lower is better) Translates to: VSGVSTQVSSNHGKMMCSLTMAF*NFLSSR Trigger: ACGAGAAGATAAGAAGTTGCAAAATGCCATTGTCAA...GCTGCACATCATTTTGCCATGGTTTGAACTTACCTGTGTGCTCACACCAGAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR TCA 90 bp | TTTTTAATTCTATCCACAGTCCATAATCTAGAAGGCAGAAATATCCCAAAGCTCGGGTGCACACCATTATaGTCTGGAAGACCCAGTAAC | + |
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Preference number: 4 (lower is better) Translates to: FLILSTVHNLEGRNIPKLGCTPL*SGRPSN Trigger: GTTACTGGGTCTTCCAGATCATAATGGTGTGCACCC...GAGCTTTGGGATATTTCTGCCTTCTAGATTATGGACTGTGGATAGAATTAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR GCA 90 bp | TTTTTAATTCTATCCACAGTCCATAATCTAGAAGGCAGAAATATCCCAAAGCTCTGCAGGGGTAACGGTTaGACTCATACAACCCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: FLILSTVHNLEGRNIPKLCRGNG*THTTLE Trigger: TTCCAGGGTTGTATGAGTGCAACCGTTACCCCTGCA...GAGCTTTGGGATATTTCTGCCTTCTAGATTATGGACTGTGGATAGAATTAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR CCA 90 bp | TTTTTAATTCTATCCACAGTCCATAATCTAGAAGGCAGAAATATCCCAAAGCTCCATAGGCAGAGTCACTaGACTGAGTCCTGCCGAAAT | + |
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Preference number: 4 (lower is better) Translates to: FLILSTVHNLEGRNIPKLHRQSH*TESCRN Trigger: ATTTCGGCAGGACTCAGTCCAGTGACTCTGCCTATG...GAGCTTTGGGATATTTCTGCCTTCTAGATTATGGACTGTGGATAGAATTAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR GCA 90 bp | TTTTTAATTCTATCCACAGTCCATAATCTAGAAGGCAGAAATATCCCAAAGCTCCACACAAACATGGTCTaGTCATCATCGTACACCGTC | + |
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Preference number: 4 (lower is better) Translates to: FLILSTVHNLEGRNIPKLHTNMV*SSSYTV Trigger: GACGGTGTACGATGATGAGCAGACCATGTTTGTGTG...GAGCTTTGGGATATTTCTGCCTTCTAGATTATGGACTGTGGATAGAATTAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR CCA 90 bp | TTTTTAATTCTATCCACAGTCCATAATCTAGAAGGCAGAAATATCCCAAAGCTCTTCCGCCATCCCAGATaGTTAAGTTCAGCCAGATTG | + |
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Preference number: 4 (lower is better) Translates to: FLILSTVHNLEGRNIPKLFRHPR*LSSARL Trigger: CAATCTGGCTGAACTTAACCATCTGGGATGGCGGAA...GAGCTTTGGGATATTTCTGCCTTCTAGATTATGGACTGTGGATAGAATTAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS CCA 90 bp | GCCTGGGCTCCCCGGACAGCCAGTTTGATCTTCCGCCATCCCAGATaGTTAAGTTCAGCCAGATTGAGCACCACACAAATGCCGCTCACA | + |
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Preference number: 5 (lower is better) Translates to: AWAPRTASLIFRHPR*LSSARLSTTQMPLT Trigger: TGTGAGCGGCATTTGTGTGGTGCTCAATCTGGCTGAACTTAACCATCTGGGATGGCGGAAGATCAAACTGGCTGTCCGGGGAGCCCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR CAA 90 bp | TCTCAATGCTACTCTTGCCTAGTGCTTCAGCTAAATGCACAGTGGGCAGGAAAGTCCTGTCTTCGGAGCTaGGACCTTGCTGCTGTGCGC | + |
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Preference number: 5 (lower is better) Translates to: SQCYSCLVLQLNAQWAGKSCLRS*DLAAVR Trigger: GCGCACAGCAGCAAGGTCCAAGCTCCGAAGACAGGA...CTTTCCTGCCCACTGTGCATTTAGCTGAAGCACTAGGCAAGAGTAGCATTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS TCA 90 bp | TGGTCTGCTCATCATCGTACACCGTCTCCCCTACAATGGCCACAATaGGTATCCGGAAGATCACCACCACAGTCAACAGGATCCTCCCAA | + |
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Preference number: 5 (lower is better) Translates to: WSAHHRTPSPLQWPQ*VSGRSPPQSTGSSQ Trigger: TTGGGAGGATCCTGTTGACTGTGGTGGTGATCTTCCGGATACTCATTGTGGCCATTGTAGGGGAGACGGTGTACGATGATGAGCAGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS TCA 90 bp | CCACCAGAAACCCAATCTCCAGAGCATTTCGAAACACCACTTGGATaGTGTAGAAGCGGGAGATACCTTCCTGTCTTCGGAGCTTGGACC | + |
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Preference number: 5 (lower is better) Translates to: PPETQSPEHFETPLG*CRSGRYLPVFGAWT Trigger: GGTCCAAGCTCCGAAGACAGGAAGGTATCTCCCGCTTCTACATCATCCAAGTGGTGTTTCGAAATGCTCTGGAGATTGGGTTTCTGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR CAA 90 bp | GCTTCAGCTAAATGCACAGTGGGCAGGAAAGGAGGAATATGGCACTTAAATGAACCCCGGACAGCCAGTTaGATCTTCCGCCATCCCAGA | + |
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Preference number: 5 (lower is better) Translates to: ASAKCTVGRKGGIWHLNEPRTAS*IFRHPR Trigger: TCTGGGATGGCGGAAGATCAAACTGGCTGTCCGGGG...TTCATTTAAGTGCCATATTCCTCCTTTCCTGCCCACTGTGCATTTAGCTGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR CAA 90 bp | GCTTCAGCTAAATGCACAGTGGGCAGGAAAGGAGGAATATGGCACTTAAATGAACCGGGCTGTAGGGTGTaGCACACAAACATGGTCTGC | + |
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Preference number: 5 (lower is better) Translates to: ASAKCTVGRKGGIWHLNEPGCRV*HTNMVC Trigger: GCAGACCATGTTTGTGTGCAACACCCTACAGCCCGG...TTCATTTAAGTGCCATATTCCTCCTTTCCTGCCCACTGTGCATTTAGCTGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS TCA 90 bp | CATAGGCAGAGTCACTGGACTGAGTCCTGCCGAAATTGGGAACACTaGCTCGAGGCAGATCTTTGTTACGTATCTCATAGACTGACTTCC | + |
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Preference number: 5 (lower is better) Translates to: HRQSHWTESCRNWEH*LEADLCYVSHRLTS Trigger: GGAAGTCAGTCTATGAGATACGTAACAAAGATCTGCCTCGAGTCAGTGTTCCCAATTTCGGCAGGACTCAGTCCAGTGACTCTGCCTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS TCA 90 bp | GTTCTGTCTCCTTACTGGTGGTCTCTGTGTTCTGCAGCACCCCATTaGCAATGGCATTTTGCAACTTCTTATCTTCTCGTTTGCTCCCTC | + |
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Preference number: 5 (lower is better) Translates to: VLSPYWWSLCSAAPH*QWHFATSYLLVCSL Trigger: GAGGGAGCAAACGAGAAGATAAGAAGTTGCAAAATGCCATTGTCAATGGGGTGCTGCAGAACACAGAGACCACCAGTAAGGAGACAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR CAA 90 bp | GCTTCAGCTAAATGCACAGTGGGCAGGAAAGGAGGAATATGGCACTTAAATGAATCGCTGCTTGGCGGATaGGTGCACAGAATAGGTGAT | + |
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Preference number: 5 (lower is better) Translates to: ASAKCTVGRKGGIWHLNESLLGG*VHRIGD Trigger: ATCACCTATTCTGTGCACCAATCCGCCAAGCAGCGA...TTCATTTAAGTGCCATATTCCTCCTTTCCTGCCCACTGTGCATTTAGCTGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS CCA 90 bp | TTGCACTCATACAACCCTGGAACACTGAAGCCATATAGAAAGTACTaGCCCACCAGAAACCCAATCTCCAGAGCATTTCGAAACACCACT | + |
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Preference number: 5 (lower is better) Translates to: LHSYNPGTLKPYRKY*PTRNPISRAFRNTT Trigger: AGTGGTGTTTCGAAATGCTCTGGAGATTGGGTTTCTGGTGGGCCAGTACTTTCTATATGGCTTCAGTGTTCCAGGGTTGTATGAGTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR CAA 90 bp | ACAGAGCTCAGCAGAGCTAATTCTTGCTTGGCAGCTATGCCAGTTCACTATGATTTCTGCAGCACCCCATaGACAATGGCATTTTGCAAC | + |
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Preference number: 5 (lower is better) Translates to: TELSRANSCLAAMPVHYDFCSTP*TMAFCN Trigger: GTTGCAAAATGCCATTGTCAATGGGGTGCTGCAGAA...ATCATAGTGAACTGGCATAGCTGCCAAGCAAGAATTAGCTCTGCTGAGCTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR CAA 90 bp | TTTTTAATTCTATCCACAGTCCATAATCTAGAAGGCAGAAATATCCCAAAGCTCTTCGGAGCTTGGACCTaGCTGCTGTGCGCAGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: FLILSTVHNLEGRNIPKLFGAWT*LLCAAQ Trigger: CTGGGCTGCGCACAGCAGCAAGGTCCAAGCTCCGAA...GAGCTTTGGGATATTTCTGCCTTCTAGATTATGGACTGTGGATAGAATTAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR CAA 90 bp | TTTTTAATTCTATCCACAGTCCATAATCTAGAAGGCAGAAATATCCCAAAGCTCCGGCGTTCTCGCTGCTaGGCGGATTGGTGCACAGAA | + |
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Preference number: 5 (lower is better) Translates to: FLILSTVHNLEGRNIPKLRRSRC*ADWCTE Trigger: TTCTGTGCACCAATCCGCCAAGCAGCGAGAACGCCG...GAGCTTTGGGATATTTCTGCCTTCTAGATTATGGACTGTGGATAGAATTAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS GCA 90 bp | TCTAAGCAATCTGGTTCTGTCTCCTTACTGGTGGTCTCTGTGTTCTaGAGCACCCCATTGACAATGGCATTTTGCAACTTCTTATCTTCT | + |
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Preference number: 5 (lower is better) Translates to: SKQSGSVSLLVVSVF*STPLTMAFCNFLSS Trigger: AGAAGATAAGAAGTTGCAAAATGCCATTGTCAATGGGGTGCTGCAGAACACAGAGACCACCAGTAAGGAGACAGAACCAGATTGCTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS-3UTR CAA 90 bp | GCTTCAGCTAAATGCACAGTGGGCAGGAAAGGAGGAATATGGCACTTAAATGAAATTTCGAAACACCACTaGGATGATGTAGAAGCGGGA | + |
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Preference number: 5 (lower is better) Translates to: ASAKCTVGRKGGIWHLNEISKHH*DDVEAG Trigger: TCCCGCTTCTACATCATCCAAGTGGTGTTTCGAAAT...TTCATTTAAGTGCCATATTCCTCCTTTCCTGCCCACTGTGCATTTAGCTGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS GCA 72 bp | GTCAACAGGATCCTCCCAATCATAGTGGAGTGCTGCTaGACCGCGGCTTCCAGCAGCCTCTCCAAGATGGTC | + |
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Preference number: 6 (lower is better) Translates to: VNRILPIIVECC*TAASSSLSKMV Trigger: GACCATCTTGGAGAGGCTGCTGGAAGCCGCGGTGCAGCAGCACTCCACTATGATTGGGAGGATCCTGTTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS GCA 72 bp | ACCACAGTCAACAGGATCCTCCCAATCATAGTGGAGTaGTGCTGCACCGCGGCTTCCAGCAGCCTCTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: TTVNRILPIIVE*CCTAASSSLSK Trigger: CTTGGAGAGGCTGCTGGAAGCCGCGGTGCAGCAGCACTCCACTATGATTGGGAGGATCCTGTTGACTGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS CAA 72 bp | GACTTCCTCTTGGCCTGGGCTCCCCGGACAGCCAGTTaGATCTTCCGCCATCCCAGATGGTTAAGTTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: DFLLAWAPRTAS*IFRHPRWLSSA Trigger: GGCTGAACTTAACCATCTGGGATGGCGGAAGATCAAACTGGCTGTCCGGGGAGCCCAGGCCAAGAGGAAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS GCA 72 bp | ACAGTCAACAGGATCCTCCCAATCATAGTGGAGTGCTaGTGCACCGCGGCTTCCAGCAGCCTCTCCAAGATG | + |
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Preference number: 6 (lower is better) Translates to: TVNRILPIIVEC*CTAASSSLSKM Trigger: CATCTTGGAGAGGCTGCTGGAAGCCGCGGTGCAGCAGCACTCCACTATGATTGGGAGGATCCTGTTGACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS CCA 72 bp | TGTAGAAGCGGGAGATACCTTCCTGTCTTCGGAGCTTaGACCTTGCTGCTGTGCGCAGCCCAGATGGATGTG | + |
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Preference number: 6 (lower is better) Translates to: CRSGRYLPVFGA*TLLLCAAQMDV Trigger: CACATCCATCTGGGCTGCGCACAGCAGCAAGGTCCAAGCTCCGAAGACAGGAAGGTATCTCCCGCTTCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS TCA 72 bp | GACTCGAGGCAGATCTTTGTTACGTATCTCATAGACTaGCTTCCTCTTGGCCTGGGCTCCCCGGACAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: DSRQIFVTYLID*LPLGLGSPDSQ Trigger: CTGGCTGTCCGGGGAGCCCAGGCCAAGAGGAAGTCAGTCTATGAGATACGTAACAAAGATCTGCCTCGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS CAA 90 bp | ACTGGTGGTCTCTGTGTTCTGCAGCACCCCATTGACAATGGCATTTaGCAACTTCTTATCTTCTCGTTTGCTCCCTCCGCTGCCCCCACC | + |
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Preference number: 6 (lower is better) Translates to: TGGLCVLQHPIDNGI*QLLIFSFAPSAAPT Trigger: GGTGGGGGCAGCGGAGGGAGCAAACGAGAAGATAAGAAGTTGCAAAATGCCATTGTCAATGGGGTGCTGCAGAACACAGAGACCACCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS CAA 72 bp | GACAGTAGAGTACCGGCGTTCTCGCTGCTTGGCGGATaGGTGCACAGAATAGGTGATAAAACAGAGACTGGG | + |
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Preference number: 6 (lower is better) Translates to: DSRVPAFSLLGG*VHRIGDKTETG Trigger: CCCAGTCTCTGTTTTATCACCTATTCTGTGCACCAATCCGCCAAGCAGCGAGAACGCCGGTACTCTACTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS CAA 90 bp | CTGGCCCACCAGAAACCCAATCTCCAGAGCATTTCGAAACACCACTaGGATGATGTAGAAGCGGGAGATACCTTCCTGTCTTCGGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: LAHQKPNLQSISKHH*DDVEAGDTFLSSEL Trigger: AAGCTCCGAAGACAGGAAGGTATCTCCCGCTTCTACATCATCCAAGTGGTGTTTCGAAATGCTCTGGAGATTGGGTTTCTGGTGGGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS TCA 72 bp | CATCATCGTACACCGTCTCCCCTACAATGGCCACAATaGGTATCCGGAAGATCACCACCACAGTCAACAGGA | + |
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Preference number: 6 (lower is better) Translates to: HHRTPSPLQWPQ*VSGRSPPQSTG Trigger: TCCTGTTGACTGTGGTGGTGATCTTCCGGATACTCATTGTGGCCATTGTAGGGGAGACGGTGTACGATGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS TCA 72 bp | AGGGGTAACGGTTGCACTCATACAACCCTGGAACACTaGAGCCATATAGAAAGTACTGGCCCACCAGAAACC | + |
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Preference number: 6 (lower is better) Translates to: RGNGCTHTTLEH*SHIESTGPPET Trigger: GGTTTCTGGTGGGCCAGTACTTTCTATATGGCTTCAGTGTTCCAGGGTTGTATGAGTGCAACCGTTACCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS TCA 72 bp | ACCCAATCTCCAGAGCATTTCGAAACACCACTTGGATaGTGTAGAAGCGGGAGATACCTTCCTGTCTTCGGA | + |
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Preference number: 6 (lower is better) Translates to: TQSPEHFETPLG*CRSGRYLPVFG Trigger: TCCGAAGACAGGAAGGTATCTCCCGCTTCTACATCATCCAAGTGGTGTTTCGAAATGCTCTGGAGATTGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS GCA 72 bp | TCTGTGTTCTGCAGCACCCCATTGACAATGGCATTTTaGAACTTCTTATCTTCTCGTTTGCTCCCTCCGCTG | + |
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Preference number: 6 (lower is better) Translates to: SVFCSTPLTMAF*NFLSSRLLPPL Trigger: CAGCGGAGGGAGCAAACGAGAAGATAAGAAGTTGCAAAATGCCATTGTCAATGGGGTGCTGCAGAACACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS GCA 72 bp | TCTGGTTCTGTCTCCTTACTGGTGGTCTCTGTGTTCTaGAGCACCCCATTGACAATGGCATTTTGCAACTTC | + |
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Preference number: 6 (lower is better) Translates to: SGSVSLLVVSVF*STPLTMAFCNF Trigger: GAAGTTGCAAAATGCCATTGTCAATGGGGTGCTGCAGAACACAGAGACCACCAGTAAGGAGACAGAACCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS CAA 90 bp | GGTTCTGTCTCCTTACTGGTGGTCTCTGTGTTCTGCAGCACCCCATaGACAATGGCATTTTGCAACTTCTTATCTTCTCGTTTGCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: GSVSLLVVSVFCSTP*TMAFCNFLSSRLLP Trigger: AGGGAGCAAACGAGAAGATAAGAAGTTGCAAAATGCCATTGTCAATGGGGTGCTGCAGAACACAGAGACCACCAGTAAGGAGACAGAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS TCA 72 bp | AGTCACTGGACTGAGTCCTGCCGAAATTGGGAACACTaGCTCGAGGCAGATCTTTGTTACGTATCTCATAGA | + |
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Preference number: 6 (lower is better) Translates to: SHWTESCRNWEH*LEADLCYVSHR Trigger: TCTATGAGATACGTAACAAAGATCTGCCTCGAGTCAGTGTTCCCAATTTCGGCAGGACTCAGTCCAGTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS TCA 72 bp | CCTTACTGGTGGTCTCTGTGTTCTGCAGCACCCCATTaGCAATGGCATTTTGCAACTTCTTATCTTCTCGTT | + |
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Preference number: 6 (lower is better) Translates to: PYWWSLCSAAPH*QWHFATSYLLV Trigger: AACGAGAAGATAAGAAGTTGCAAAATGCCATTGTCAATGGGGTGCTGCAGAACACAGAGACCACCAGTAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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| CDS CAA 72 bp | TCCTTACTGGTGGTCTCTGTGTTCTGCAGCACCCCATaGACAATGGCATTTTGCAACTTCTTATCTTCTCGT | + |
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Preference number: 6 (lower is better) Translates to: SLLVVSVFCSTP*TMAFCNFLSSR Trigger: ACGAGAAGATAAGAAGTTGCAAAATGCCATTGTCAATGGGGTGCTGCAGAACACAGAGACCACCAGTAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090275.5 |
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