Pregenerated sensors for GJC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056966Ensembl transcript IDs: ENSMUST00000077119.8
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCCATCATTGGGAAGAGAGGTCCCTTGGTTTTGCAAACTTTATATaGCCCAGTACAGGGGAACGCCAGGGCCAAGAAATGGGAGTGGGT | + |
|
Preference number: 1 (lower is better) Translates to: CHHWEERSLGFANFI*PSTGERQGQEMGVG Trigger: ACCCACTCCCATTTCTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAAACCAAGGGACCTCTCTTCCCAATGATGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR CCA 90 bp | AGTACCGCCATAGCTCCTGTCTCTAGCTGCATATGTAGCAGAAGATaGCCTACTCTGCCATCATTGGGAAGAGAGGTCCCTTGGTTTTGC | + |
|
Preference number: 1 (lower is better) Translates to: STAIAPVSSCICSRR*PTLPSLGREVPWFC Trigger: GCAAAACCAAGGGACCTCTCTTCCCAATGATGGCAGAGTAGGCCATCTTCTGCTACATATGCAGCTAGAGACAGGAGCTATGGCGGTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTACTCTTCATGACATGTATGTaGGCAACTTGTGGGAGTTGGTTTTCTCCCTTCTCCGTGTGGGTT | + |
|
Preference number: 1 (lower is better) Translates to: VCVCVCVCVLFMTCM*ATCGSWFSPFSVWV Trigger: AACCCACACGGAGAAGGGAGAAAACCAACTCCCACAAGTTGCCCACATACATGTCATGAAGAGTACACACACACACACACACACACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR CCA 90 bp | GTGTGTGTACTCTTCATGACATGTATGTGGGCAACTTGTGGGAGTTaGTTTTCTCCCTTCTCCGTGTGGGTTCTGGAGATCAATCTCAGA | + |
|
Preference number: 1 (lower is better) Translates to: VCVLFMTCMWATCGS*FSPFSVWVLEINLR Trigger: TCTGAGATTGATCTCCAGAACCCACACGGAGAAGGGAGAAAACCAACTCCCACAAGTTGCCCACATACATGTCATGAAGAGTACACACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR CCA 90 bp | TGTGTGTGTGTGTGTACTCTTCATGACATGTATGTGGGCAACTTGTaGGAGTTGGTTTTCTCCCTTCTCCGTGTGGGTTCTGGAGATCAA | + |
|
Preference number: 1 (lower is better) Translates to: CVCVCTLHDMYVGNL*ELVFSLLRVGSGDQ Trigger: TTGATCTCCAGAACCCACACGGAGAAGGGAGAAAACCAACTCCCACAAGTTGCCCACATACATGTCATGAAGAGTACACACACACACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR CCA 90 bp | ATGAATCTGATGAGTTCCAACAACCAGCCTCACAAGACACATGCATaGGTGAAACAGTGGTGTAGCTGGTACAGGAGTAACCAACTGCTT | + |
|
Preference number: 1 (lower is better) Translates to: MNLMSSNNQPHKTHA*VKQWCSWYRSNQLL Trigger: AAGCAGTTGGTTACTCCTGTACCAGCTACACCACTGTTTCACCCATGCATGTGTCTTGTGAGGCTGGTTGTTGGAACTCATCAGATTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR GCA 90 bp | AGAAATGGGAAAGAAAAATGTAAAGATCCAGTGCTCTGGGAGATCTaGTATGAAACAACATCTTATGAACACAGCAGGAACTTGCATTCA | + |
|
Preference number: 1 (lower is better) Translates to: RNGKEKCKDPVLWEI*YETTSYEHSRNLHS Trigger: TGAATGCAAGTTCCTGCTGTGTTCATAAGATGTTGTTTCATAGCAGATCTCCCAGAGCACTGGATCTTTACATTTTTCTTTCCCATTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR CAA 90 bp | AAGATGGCCTACTCTGCCATCATTGGGAAGAGAGGTCCCTTGGTTTaGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: KMAYSAIIGKRGPLV*QTLYAPVQGNARAK Trigger: CTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAAACCAAGGGACCTCTCTTCCCAATGATGGCAGAGTAGGCCATCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR-3UTR CCA 90 bp | CATAATCAGCCACCAAACACAGACACCATTGCATATGCCAGCAAGATTTTGCTAGCCAGGGCCAAGAAATaGGAGTGGGTGGGTAGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: HNQPPNTDTIAYASKILLARAKK*EWVGRG Trigger: TCCCCTACCCACCCACTCCCATTTCTTGGCCCTGGC...TAGCAAAATCTTGCTGGCATATGCAATGGTGTCTGTGTTTGGTGGCTGATTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTACTCTTCATGACATGTATGTGGGCAACTaGTGGGAGTTGGTTTTCTCCCTTCTCCGTGTGGGTTCTGGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: VCVCVCTLHDMYVGN*WELVFSLLRVGSGD Trigger: ATCTCCAGAACCCACACGGAGAAGGGAGAAAACCAACTCCCACAAGTTGCCCACATACATGTCATGAAGAGTACACACACACACACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR CAA 90 bp | TGTGTGTGTACTCTTCATGACATGTATGTGGGCAACTTGTGGGAGTaGGTTTTCTCCCTTCTCCGTGTGGGTTCTGGAGATCAATCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: CVCTLHDMYVGNLWE*VFSLLRVGSGDQSQ Trigger: CTGAGATTGATCTCCAGAACCCACACGGAGAAGGGAGAAAACCAACTCCCACAAGTTGCCCACATACATGTCATGAAGAGTACACACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR-3UTR GCA 90 bp | CATAATCAGCCACCAAACACAGACACCATTGCATATGCCAGCAAGATTTTGCTAGCCAAGAACCCATCCTaGGGAGCTCAAAAGCCCTAC | + |
|
Preference number: 2 (lower is better) Translates to: HNQPPNTDTIAYASKILLAKNPS*GAQKPY Trigger: GTAGGGCTTTTGAGCTCCGCAGGATGGGTTCTTGGC...TAGCAAAATCTTGCTGGCATATGCAATGGTGTCTGTGTTTGGTGGCTGATTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR-3UTR GCA 90 bp | AAATGTAAAATGCATCCAGAGACTACCCCACCCAGGGATCCATCCCATAATCAGGCCTCACAAGACACATaGATGGGTGAAACAGTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: KCKMHPETTPPRDPSHNQASQDT*MGETVV Trigger: CACCACTGTTTCACCCATGCATGTGTCTTGTGAGGC...CTGATTATGGGATGGATCCCTGGGTGGGGTAGTCTCTGGATGCATTTTACATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR-3UTR CCA 90 bp | AAATGTAAAATGCATCCAGAGACTACCCCACCCAGGGATCCATCCCATAATCAGGCAACTTGTGGGAGTTaGTTTTCTCCCTTCTCCGTG | + |
|
Preference number: 2 (lower is better) Translates to: KCKMHPETTPPRDPSHNQATCGS*FSPFSV Trigger: CACGGAGAAGGGAGAAAACCAACTCCCACAAGTTGC...CTGATTATGGGATGGATCCCTGGGTGGGGTAGTCTCTGGATGCATTTTACATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR-3UTR CCA 90 bp | AAATGTAAAATGCATCCAGAGACTACCCCACCCAGGGATCCATCCCATAATCAGAGACTCCATCTTCTTTaGGTGTGGCATCGAGTAGGT | + |
|
Preference number: 2 (lower is better) Translates to: KCKMHPETTPPRDPSHNQRLHLL*VWHRVG Trigger: ACCTACTCGATGCCACACCCAAAGAAGATGGAGTCT...CTGATTATGGGATGGATCCCTGGGTGGGGTAGTCTCTGGATGCATTTTACATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR-3UTR CCA 90 bp | CATAATCAGCCACCAAACACAGACACCATTGCATATGCCAGCAAGATTTTGCTATCTCCCTTCTCCGTGTaGGTTCTGGAGATCAATCTC | + |
|
Preference number: 2 (lower is better) Translates to: HNQPPNTDTIAYASKILLSPFSV*VLEINL Trigger: GAGATTGATCTCCAGAACCCACACGGAGAAGGGAGA...TAGCAAAATCTTGCTGGCATATGCAATGGTGTCTGTGTTTGGTGGCTGATTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR-3UTR GCA 90 bp | AAATGTAAAATGCATCCAGAGACTACCCCACCCAGGGATCCATCCCATAATCAGAATGTAAAGATCCAGTaGTCTGGGAGATCTGCTATG | + |
|
Preference number: 2 (lower is better) Translates to: KCKMHPETTPPRDPSHNQNVKIQ*SGRSAM Trigger: CATAGCAGATCTCCCAGAGCACTGGATCTTTACATT...CTGATTATGGGATGGATCCCTGGGTGGGGTAGTCTCTGGATGCATTTTACATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGTCTGAACAATATTCCACCATGTACACATTTTCCCCAATCCATTTGGTGGACAACTCACAGAAGCAGTaGTTGCCTGCACAAGCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: ESEQYSTMYTFSPIHLVDNSQKQ*LPAQAQ Trigger: TTGAGCTTGTGCAGGCAACCACTGCTTCTGTGAGTT...GTCCACCAAATGGATTGGGGAAAATGTGTACATGGTGGAATATTGTTCAGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR-3UTR GCA 90 bp | AAATGTAAAATGCATCCAGAGACTACCCCACCCAGGGATCCATCCCATAATCAGGTGCTCTGGGAGATCTaGTATGAAACAACATCTTAT | + |
|
Preference number: 2 (lower is better) Translates to: KCKMHPETTPPRDPSHNQVLWEI*YETTSY Trigger: ATAAGATGTTGTTTCATAGCAGATCTCCCAGAGCAC...CTGATTATGGGATGGATCCCTGGGTGGGGTAGTCTCTGGATGCATTTTACATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGTCTGAACAATATTCCACCATGTACACATTTTCCCCAATCCATTTGGTGGACTTTGCAAACTTTATATaGCCCAGTACAGGGGAACGC | + |
|
Preference number: 2 (lower is better) Translates to: ESEQYSTMYTFSPIHLVDFANFI*PSTGER Trigger: GCGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAA...GTCCACCAAATGGATTGGGGAAAATGTGTACATGGTGGAATATTGTTCAGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR-3UTR CCA 90 bp | CATAATCAGCCACCAAACACAGACACCATTGCATATGCCAGCAAGATTTTGCTATATGTGGGCAACTTGTaGGAGTTGGTTTTCTCCCTT | + |
|
Preference number: 2 (lower is better) Translates to: HNQPPNTDTIAYASKILLYVGNL*ELVFSL Trigger: AAGGGAGAAAACCAACTCCCACAAGTTGCCCACATA...TAGCAAAATCTTGCTGGCATATGCAATGGTGTCTGTGTTTGGTGGCTGATTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGGAGATCTGCTATGAAACAACATCTTATGAACACAGCAGGAACTTGCATTCAGCATTACAGGATGAATaGGAGAAGGACTACCCACAA | + |
|
Preference number: 2 (lower is better) Translates to: WEICYETTSYEHSRNLHSALQDE*EKDYPQ Trigger: TTGTGGGTAGTCCTTCTCTCATTCATCCTGTAATGC...TGAATGCAAGTTCCTGCTGTGTTCATAAGATGTTGTTTCATAGCAGATCTCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGTCTGAACAATATTCCACCATGTACACATTTTCCCCAATCCATTTGGTGGACCTTTGCCTTTACTTCTaGGAGTTAGTTCTGCCAATC | + |
|
Preference number: 2 (lower is better) Translates to: ESEQYSTMYTFSPIHLVDLCLYF*ELVLPI Trigger: GATTGGCAGAACTAACTCTCAGAAGTAAAGGCAAAG...GTCCACCAAATGGATTGGGGAAAATGTGTACATGGTGGAATATTGTTCAGACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCCTTCCTAGTCATCAAAACTCTTTCTCATGTATGAATCTGATGAGTTCCAACCACAAGACACATGCATaGGTGAAACAGTGGTGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: SLPSHQNSFSCMNLMSSNHKTHA*VKQWCS Trigger: GCTACACCACTGTTTCACCCATGCATGTGTCTTGTG...GTTGGAACTCATCAGATTCATACATGAGAAAGAGTTTTGATGACTAGGAAGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR-3UTR GCA 90 bp | CAATATTCCACCATGTACACATTTTCCCCAATCCATTTGGTGGACATTTACAATTTGGCAGTTGATCAATaGTGGCAGAGGAAGACTCCA | + |
|
Preference number: 2 (lower is better) Translates to: QYSTMYTFSPIHLVDIYNLAVDQ*WQRKTP Trigger: TGGAGTCTTCCTCTGCCAGCATTGATCAACTGCCAA...ATTGTAAATGTCCACCAAATGGATTGGGGAAAATGTGTACATGGTGGAATATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCCTTCCTAGTCATCAAAACTCTTTCTCATGTATGAATCTGATGAGTTCCAACTGTGTGTACTCTTCATaGCATGTATGTGGGCAACTT | + |
|
Preference number: 2 (lower is better) Translates to: SLPSHQNSFSCMNLMSSNCVYSS*HVCGQL Trigger: AAGTTGCCCACATACATGTCATGAAGAGTACACACA...GTTGGAACTCATCAGATTCATACATGAGAAAGAGTTTTGATGACTAGGAAGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGTCTGAACAATATTCCACCATGTACACATTTTCCCCAATCCATTTGGTGGACAGACACCATTGCATATaGCAGCAAGATTTTGCTAAA | + |
|
Preference number: 2 (lower is better) Translates to: ESEQYSTMYTFSPIHLVDRHHCI*QQDFAK Trigger: TTTAGCAAAATCTTGCTGGCATATGCAATGGTGTCT...GTCCACCAAATGGATTGGGGAAAATGTGTACATGGTGGAATATTGTTCAGACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCCTTCCTAGTCATCAAAACTCTTTCTCATGTATGAATCTGATGAGTTCCAACGTCAGTTTTCAACACTaGCCACAGACTTTTTCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: SLPSHQNSFSCMNLMSSNVSFQH*PQTFSF Trigger: AAAAGAAAAAGTCTGTGGTCAGTGTTGAAAACTGAC...GTTGGAACTCATCAGATTCATACATGAGAAAGAGTTTTGATGACTAGGAAGGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR-3UTR GCA 90 bp | AGCCTTCCTAGTCATCAAAACTCTTTCTCATGTATGAATCTGATGAGTTCCAACCTTACAATTTGTAAATaGAGAAACAGGTGTCCATGT | + |
|
Preference number: 2 (lower is better) Translates to: SLPSHQNSFSCMNLMSSNLTICK*RNRCPC Trigger: ACATGGACACCTGTTTCTGCATTTACAAATTGTAAG...GTTGGAACTCATCAGATTCATACATGAGAAAGAGTTTTGATGACTAGGAAGGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR CCA 72 bp | TCCACAAGAGAAACCCCATGCCTGGTACTACAAATCTaGCCAAGAACCCATCCTGCGGAGCTCAAAAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: STRETPCLVLQI*PRTHPAELKSP Trigger: AGGGCTTTTGAGCTCCGCAGGATGGGTTCTTGGCCAGATTTGTAGTACCAGGCATGGGGTTTCTCTTGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR GCA 72 bp | TGGGAAGAGAGGTCCCTTGGTTTTGCAAACTTTATATaGCCCAGTACAGGGGAACGCCAGGGCCAAGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: WEERSLGFANFI*PSTGERQGQEM Trigger: CATTTCTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAAACCAAGGGACCTCTCTTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR CCA 72 bp | CCCACAACTGAGGAACTGTTGGCAGTTGATCAATGCTaGCAGAGGAAGACTCCATCTTCTTTGGGTGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: PTTEELLAVDQC*QRKTPSSLGVA Trigger: TGCCACACCCAAAGAAGATGGAGTCTTCCTCTGCCAGCATTGATCAACTGCCAACAGTTCCTCAGTTGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR TCA 72 bp | GTTCCAACAACCAGCCTCACAAGACACATGCATGGGTaGAACAGTGGTGTAGCTGGTACAGGAGTAACCAAC | + |
|
Preference number: 3 (lower is better) Translates to: VPTTSLTRHMHG*NSGVAGTGVTN Trigger: GTTGGTTACTCCTGTACCAGCTACACCACTGTTTCACCCATGCATGTGTCTTGTGAGGCTGGTTGTTGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR GCA 72 bp | CTACCCACAACTGAGGAACTGTTGGCAGTTGATCAATaGTGGCAGAGGAAGACTCCATCTTCTTTGGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LPTTEELLAVDQ*WQRKTPSSLGV Trigger: CACACCCAAAGAAGATGGAGTCTTCCTCTGCCAGCATTGATCAACTGCCAACAGTTCCTCAGTTGTGGGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR GCA 72 bp | GAACTAACCAGTACCGCCATAGCTCCTGTCTCTAGCTaGATATGTAGCAGAAGATGGCCTACTCTGCCATCA | + |
|
Preference number: 3 (lower is better) Translates to: ELTSTAIAPVSS*ICSRRWPTLPS Trigger: TGATGGCAGAGTAGGCCATCTTCTGCTACATATGCAGCTAGAGACAGGAGCTATGGCGGTACTGGTTAGTTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR CCA 72 bp | CTCTTCATGACATGTATGTGGGCAACTTGTGGGAGTTaGTTTTCTCCCTTCTCCGTGTGGGTTCTGGAGATC | + |
|
Preference number: 3 (lower is better) Translates to: LFMTCMWATCGS*FSPFSVWVLEI Trigger: GATCTCCAGAACCCACACGGAGAAGGGAGAAAACCAACTCCCACAAGTTGCCCACATACATGTCATGAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR CCA 72 bp | ATAGCTCCTGTCTCTAGCTGCATATGTAGCAGAAGATaGCCTACTCTGCCATCATTGGGAAGAGAGGTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: IAPVSSCICSRR*PTLPSLGREVP Trigger: AGGGACCTCTCTTCCCAATGATGGCAGAGTAGGCCATCTTCTGCTACATATGCAGCTAGAGACAGGAGCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR TCA 72 bp | TGCCTGCACAAGCTCAAGACACTCAGCATTACAGGATaGATGAGAGAAGGACTACCCACAACTGAGGAACTG | + |
|
Preference number: 3 (lower is better) Translates to: CLHKLKTLSITG*MREGLPTTEEL Trigger: CAGTTCCTCAGTTGTGGGTAGTCCTTCTCTCATTCATCCTGTAATGCTGAGTGTCTTGAGCTTGTGCAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR GCA 72 bp | TCTCTAGCTGCATATGTAGCAGAAGATGGCCTACTCTaGCATCATTGGGAAGAGAGGTCCCTTGGTTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SLAAYVAEDGLL*HHWEERSLGFA Trigger: TGCAAAACCAAGGGACCTCTCTTCCCAATGATGGCAGAGTAGGCCATCTTCTGCTACATATGCAGCTAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR CCA 72 bp | ATGAGTTCCAACAACCAGCCTCACAAGACACATGCATaGGTGAAACAGTGGTGTAGCTGGTACAGGAGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: MSSNNQPHKTHA*VKQWCSWYRSN Trigger: GTTACTCCTGTACCAGCTACACCACTGTTTCACCCATGCATGTGTCTTGTGAGGCTGGTTGTTGGAACTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGTCTGAACAATATTCCACCATGTACACATTTTCCCCAATCCATTTGGTGGACGGCAACTTGTGGGAGTaGGTTTTCTCCCTTCTCCGT | + |
|
Preference number: 3 (lower is better) Translates to: ESEQYSTMYTFSPIHLVDGNLWE*VFSLLR Trigger: ACGGAGAAGGGAGAAAACCAACTCCCACAAGTTGCC...GTCCACCAAATGGATTGGGGAAAATGTGTACATGGTGGAATATTGTTCAGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR CCA 72 bp | CAGCAGGAACTTGCATTCATAAACTCACAGAAGCAGTaGTTGCCTGCACAAGCTCAAGACACTCAGCATTAC | + |
|
Preference number: 3 (lower is better) Translates to: QQELAFINSQKQ*LPAQAQDTQHY Trigger: GTAATGCTGAGTGTCTTGAGCTTGTGCAGGCAACCACTGCTTCTGTGAGTTTATGAATGCAAGTTCCTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR-3UTR CAA 90 bp | CATAATCAGCCACCAAACACAGACACCATTGCATATGCCAGCAAGATTTTGCTAAGAGGTCCCTTGGTTTaGCAAACTTTATATGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: HNQPPNTDTIAYASKILLRGPLV*QTLYAP Trigger: TGGGGCATATAAAGTTTGCAAAACCAAGGGACCTCT...TAGCAAAATCTTGCTGGCATATGCAATGGTGTCTGTGTTTGGTGGCTGATTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR GCA 72 bp | GCTATGAAACAACATCTTATGAACACAGCAGGAACTTaGATTCATAAACTCACAGAAGCAGTGGTTGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: AMKQHLMNTAGT*IHKLTEAVVAC Trigger: GCAGGCAACCACTGCTTCTGTGAGTTTATGAATGCAAGTTCCTGCTGTGTTCATAAGATGTTGTTTCATAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTCCATGTAATATTCAGTCTCAAATGAGACATCGACAGCACATCCTTGCCCCCACACCAATTCACACTTaGAGTAGCACTGATTTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: CPCNIQSQMRHRQHILAPTPIHT*SSTDFC Trigger: ACAAAAATCAGTGCTACTCAAAGTGTGAATTGGTGT...GGGGGCAAGGATGTGCTGTCGATGTCTCATTTGAGACTGAATATTACATGGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCCTTCCTAGTCATCAAAACTCTTTCTCATGTATGAATCTGATGAGTTCCAACACAACTGAGGAACTGTaGGCAGTTGATCAATGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SLPSHQNSFSCMNLMSSNTTEEL*AVDQCW Trigger: CCAGCATTGATCAACTGCCAACAGTTCCTCAGTTGT...GTTGGAACTCATCAGATTCATACATGAGAAAGAGTTTTGATGACTAGGAAGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR GCA 72 bp | AAAGAAAAATGTAAAGATCCAGTGCTCTGGGAGATCTaGTATGAAACAACATCTTATGAACACAGCAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: KEKCKDPVLWEI*YETTSYEHSRN Trigger: GTTCCTGCTGTGTTCATAAGATGTTGTTTCATAGCAGATCTCCCAGAGCACTGGATCTTTACATTTTTCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR GCA 72 bp | GAACAGTGGCCAATATACAGACTTACAATTTGTAAATaGAGAAACAGGTGTCCATGTAATATTCAGTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: EQWPIYRLTICK*RNRCPCNIQSQ Trigger: TTGAGACTGAATATTACATGGACACCTGTTTCTGCATTTACAAATTGTAAGTCTGTATATTGGCCACTGTTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR CAA 72 bp | GTTGATCAATGCTGGCAGAGGAAGACTCCATCTTCTTaGGGTGTGGCATCGAGTAGGTTGACTGTGTTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: VDQCWQRKTPSS*GVASSRLTVFG Trigger: CCCGAACACAGTCAACCTACTCGATGCCACACCCAAAGAAGATGGAGTCTTCCTCTGCCAGCATTGATCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS-3UTR TCA 90 bp | TGTCCATGTAATATTCAGTCTCAAATGAGACATCGACAGCACATCCTTGCCCCCGGAGACGGAATCCCATaGGCATGGGAAGAAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CPCNIQSQMRHRQHILAPGDGIP*AWEEGS Trigger: GCTTCCTTCTTCCCATGCTCATGGGATTCCGTCTCC...GGGGGCAAGGATGTGCTGTCGATGTCTCATTTGAGACTGAATATTACATGGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS-3UTR TCA 90 bp | GAGTCTGAACAATATTCCACCATGTACACATTTTCCCCAATCCATTTGGTGGACGAGTGCTGGCTCTCCTaGGCCAATAGCTGTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ESEQYSTMYTFSPIHLVDECWLS*ANSCLR Trigger: CCTGAGACAGCTATTGGCTCAGGAGAGCCAGCACTC...GTCCACCAAATGGATTGGGGAAAATGTGTACATGGTGGAATATTGTTCAGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS-3UTR CCA 90 bp | CAACTTGTGGGAGTTGGTTTTCTCCCTTCTCCGTGTGGGTTCTGGAGATCAATCCATCCTGCACTTGATTaGCAACTCCAGCAGAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QLVGVGFLPSPCGFWRSIHPALD*QLQQKH Trigger: ATGCTTCTGCTGGAGTTGCCAATCAAGTGCAGGATG...GATTGATCTCCAGAACCCACACGGAGAAGGGAGAAAACCAACTCCCACAAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR CAA 72 bp | ACTCTTCATGACATGTATGTGGGCAACTTGTGGGAGTaGGTTTTCTCCCTTCTCCGTGTGGGTTCTGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TLHDMYVGNLWE*VFSLLRVGSGD Trigger: ATCTCCAGAACCCACACGGAGAAGGGAGAAAACCAACTCCCACAAGTTGCCCACATACATGTCATGAAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR CAA 72 bp | TGTGTGTGTACTCTTCATGACATGTATGTGGGCAACTaGTGGGAGTTGGTTTTCTCCCTTCTCCGTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CVCTLHDMYVGN*WELVFSLLRVG Trigger: ACCCACACGGAGAAGGGAGAAAACCAACTCCCACAAGTTGCCCACATACATGTCATGAAGAGTACACACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR CAA 72 bp | GAGAAGGACTACCCACAACTGAGGAACTGTTGGCAGTaGATCAATGCTGGCAGAGGAAGACTCCATCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EKDYPQLRNCWQ*INAGRGRLHLL Trigger: AAGAAGATGGAGTCTTCCTCTGCCAGCATTGATCAACTGCCAACAGTTCCTCAGTTGTGGGTAGTCCTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS-3UTR GCA 90 bp | TGGGAGATCTGCTATGAAACAACATCTTATGAACACAGCAGGAACTTGCATTCACCGTACCCCAAGGTGTaGCACATAGGCCCAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WEICYETTSYEHSRNLHSPYPKV*HIGPEK Trigger: CTTCTCTGGGCCTATGTGGCACACCTTGGGGTACGG...TGAATGCAAGTTCCTGCTGTGTTCATAAGATGTTGTTTCATAGCAGATCTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS-3UTR GCA 90 bp | CAACTTGTGGGAGTTGGTTTTCTCCCTTCTCCGTGTGGGTTCTGGAGATCAATCACTGGAAACAGGTTGTaGTGCCAATACAAGGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: QLVGVGFLPSPCGFWRSITGNRL*CQYKDP Trigger: AGGATCCTTGTATTGGCAGCACAACCTGTTTCCAGT...GATTGATCTCCAGAACCCACACGGAGAAGGGAGAAAACCAACTCCCACAAGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS-3UTR TCA 90 bp | GAGTCTGAACAATATTCCACCATGTACACATTTTCCCCAATCCATTTGGTGGACGTCTTCTCAGAGGGGTaGGACTGGAAACAGGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ESEQYSTMYTFSPIHLVDVFSEG*DWKQVV Trigger: CACAACCTGTTTCCAGTCTCACCCCTCTGAGAAGAC...GTCCACCAAATGGATTGGGGAAAATGTGTACATGGTGGAATATTGTTCAGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS-3UTR GCA 90 bp | AAATGTAAAATGCATCCAGAGACTACCCCACCCAGGGATCCATCCCATAATCAGCATAGCAAATGGTCTTaGAGCCTGGCTGCCCTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KCKMHPETTPPRDPSHNQHSKWS*SLAALN Trigger: ATTTAGGGCAGCCAGGCTGCAAGACCATTTGCTATG...CTGATTATGGGATGGATCCCTGGGTGGGGTAGTCTCTGGATGCATTTTACATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS-3UTR CCA 90 bp | CATAATCAGCCACCAAACACAGACACCATTGCATATGCCAGCAAGATTTTGCTAAAACCCCAGGTCCACTaGAAACCAAGATCAGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HNQPPNTDTIAYASKILLKPQVH*KPRSGD Trigger: GTCTCCTGATCTTGGTTTCCAGTGGACCTGGGGTTT...TAGCAAAATCTTGCTGGCATATGCAATGGTGTCTGTGTTTGGTGGCTGATTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS-3UTR TCA 90 bp | TGTCCATGTAATATTCAGTCTCAAATGAGACATCGACAGCACATCCTTGCCCCCCAGTATCCAATCACATaGTACAGAGTGAAAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: CPCNIQSQMRHRQHILAPQYPIT*YRVKAT Trigger: TGTGGCTTTCACTCTGTATCATGTGATTGGATACTG...GGGGGCAAGGATGTGCTGTCGATGTCTCATTTGAGACTGAATATTACATGGACA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS-3UTR CCA 90 bp | CATAATCAGCCACCAAACACAGACACCATTGCATATGCCAGCAAGATTTTGCTACATCGGTTGTGTCCTTaGATCTTACAGAGCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HNQPPNTDTIAYASKILLHRLCP*ILQSSL Trigger: CAGAGAGCTCTGTAAGATCCAAGGACACAACCGATG...TAGCAAAATCTTGCTGGCATATGCAATGGTGTCTGTGTTTGGTGGCTGATTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS-3UTR TCA 90 bp | GAGTCTGAACAATATTCCACCATGTACACATTTTCCCCAATCCATTTGGTGGACCCTGGCTGCCCTAAATaGCATATGAATTCATTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ESEQYSTMYTFSPIHLVDPGCPK*HMNSFS Trigger: TGAGAATGAATTCATATGTCATTTAGGGCAGCCAGG...GTCCACCAAATGGATTGGGGAAAATGTGTACATGGTGGAATATTGTTCAGACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS-3UTR TCA 90 bp | CAATATTCCACCATGTACACATTTTCCCCAATCCATTTGGTGGACATTTACAATGAGGCTTTTAGCCCCTaGGACATCCTTGCTATGATC | + |
|
Preference number: 4 (lower is better) Translates to: QYSTMYTFSPIHLVDIYNEAFSP*DILAMI Trigger: GATCATAGCAAGGATGTCTCAGGGGCTAAAAGCCTC...ATTGTAAATGTCCACCAAATGGATTGGGGAAAATGTGTACATGGTGGAATATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS-3UTR TCA 90 bp | TGGGAGATCTGCTATGAAACAACATCTTATGAACACAGCAGGAACTTGCATTCATCACATGATACAGAGTaGAAGCCACATAAATGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: WEICYETTSYEHSRNLHSSHDTE*KPHKWH Trigger: GTGCCATTTATGTGGCTTTCACTCTGTATCATGTGA...TGAATGCAAGTTCCTGCTGTGTTCATAAGATGTTGTTTCATAGCAGATCTCCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS-3UTR GCA 90 bp | AAATGTAAAATGCATCCAGAGACTACCCCACCCAGGGATCCATCCCATAATCAGAAGAAGGAAAGTTTGTaGTTGTATATCCTCCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KCKMHPETTPPRDPSHNQKKESL*LYILQN Trigger: GTTTTGGAGGATATACAAGCACAAACTTTCCTTCTT...CTGATTATGGGATGGATCCCTGGGTGGGGTAGTCTCTGGATGCATTTTACATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR CAA 72 bp | TGTGTTCGGGTAGATAGCTTCACACCAATTCACACTTaGAGTAGCACTGATTTTTGTTCTCAGTGGGTTATA | + |
|
Preference number: 4 (lower is better) Translates to: CVRVDSFTPIHT*SSTDFCSQWVI Trigger: TATAACCCACTGAGAACAAAAATCAGTGCTACTCAAAGTGTGAATTGGTGTGAAGCTATCTACCCGAACACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| 3UTR CAA 72 bp | CAGGCACATACATCACATCAAGACAAATGCTTATCTTaGCCTTTACTTCTGAGAGTTAGTTCTGCCAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: QAHTSHQDKCLS*PLLLRVSSANH Trigger: ATGATTGGCAGAACTAACTCTCAGAAGTAAAGGCAAAGATAAGCATTTGTCTTGATGTGATGTATGTGCCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS-3UTR TCA 90 bp | CAATATTCCACCATGTACACATTTTCCCCAATCCATTTGGTGGACATTTACAATGCCCTAAATGACATATaGATTCATTCTCATCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: QYSTMYTFSPIHLVDIYNALNDI*IHSHHC Trigger: GCAATGATGAGAATGAATTCATATGTCATTTAGGGC...ATTGTAAATGTCCACCAAATGGATTGGGGAAAATGTGTACATGGTGGAATATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS TCA 90 bp | CGACATATAAAAGTGCTGGACATCTTGAAACCATACAGATTGTACTaGACACCTAGAGCTGCTCCCTCAAGGGCCAGCCGTACCCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RHIKVLDILKPYRLY*TPRAAPSRASRTPR Trigger: CCTTGGGGTACGGCTGGCCCTTGAGGGAGCAGCTCTAGGTGTTCAGTACAATCTGTATGGTTTCAAGATGTCCAGCACTTTTATATGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS CCA 90 bp | ATGGCTCTTTTGCCTCCACCACTGACAATTCATCGGTTGTGTCCTTaGATCTTACAGAGCTCTCTGAAGTTGGCAACTTCTTTAAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: MALLPPPLTIHRLCP*ILQSSLKLATSLRR Trigger: CCTTCTTAAAGAAGTTGCCAACTTCAGAGAGCTCTGTAAGATCCAAGGACACAACCGATGAATTGTCAGTGGTGGAGGCAAAAGAGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS GCA 90 bp | ACAGAGCTCTCTGAAGTTGGCAACTTCTTTAAGAAGGAAAGTTTGTaGTTGTATATCCTCCAAAACCTCCCTAAACCCAAAAGCGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: TELSEVGNFFKKESL*LYILQNLPKPKSAS Trigger: GCTTGCGCTTTTGGGTTTAGGGAGGTTTTGGAGGATATACAAGCACAAACTTTCCTTCTTAAAGAAGTTGCCAACTTCAGAGAGCTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS-3UTR CAA 90 bp | AGCCTTCCTAGTCATCAAAACTCTTTCTCATGTATGAATCTGATGAGTTCCAACCAGAGCTCTCTGAAGTaGGCAACTTCTTTAAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLPSHQNSFSCMNLMSSNQSSLK*ATSLRR Trigger: CCTTCTTAAAGAAGTTGCCAACTTCAGAGAGCTCTG...GTTGGAACTCATCAGATTCATACATGAGAAAGAGTTTTGATGACTAGGAAGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS GCA 72 bp | AGCTGCTCCCTCAAGGGCCAGCCGTACCCCAAGGTGTaGCACATAGGCCCAGAGAAGCTTGAGGCTTTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: SCSLKGQPYPKV*HIGPEKLEAFS Trigger: GCTAAAAGCCTCAAGCTTCTCTGGGCCTATGTGGCACACCTTGGGGTACGGCTGGCCCTTGAGGGAGCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS TCA 72 bp | GTCCACTGGAAACCAAGATCAGGAGACGGAATCCCATaGGCATGGGAAGAAGGAAGCGCCCCACAGGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: VHWKPRSGDGIP*AWEEGSAPQGW Trigger: CCACCCCTGTGGGGCGCTTCCTTCTTCCCATGCTCATGGGATTCCGTCTCCTGATCTTGGTTTCCAGTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS CAA 90 bp | AGTGAAAGCCACATAAATGGCACTGGGTACAGCCATCAGAATGACTaGGAAGGCCCAGAAGCGCAATGGAGAGAGAGGGCGGAAGACATC | + |
|
Preference number: 6 (lower is better) Translates to: SESHINGTGYSHQND*EGPEAQWRERAEDI Trigger: GATGTCTTCCGCCCTCTCTCTCCATTGCGCTTCTGGGCCTTCCAAGTCATTCTGATGGCTGTACCCAGTGCCATTTATGTGGCTTTCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS TCA 72 bp | AAGCCACATAAATGGCACTGGGTACAGCCATCAGAATaGCTTGGAAGGCCCAGAAGCGCAATGGAGAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: KPHKWHWVQPSE*LGRPRSAMERE Trigger: CTCTCTCTCCATTGCGCTTCTGGGCCTTCCAAGTCATTCTGATGGCTGTACCCAGTGCCATTTATGTGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS TCA 72 bp | AAAGTGCTGGACATCTTGAAACCATACAGATTGTACTaGACACCTAGAGCTGCTCCCTCAAGGGCCAGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: KVLDILKPYRLY*TPRAAPSRASR Trigger: ACGGCTGGCCCTTGAGGGAGCAGCTCTAGGTGTTCAGTACAATCTGTATGGTTTCAAGATGTCCAGCACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS CCA 72 bp | TTGCCTCCACCACTGACAATTCATCGGTTGTGTCCTTaGATCTTACAGAGCTCTCTGAAGTTGGCAACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LPPPLTIHRLCP*ILQSSLKLATS Trigger: AGAAGTTGCCAACTTCAGAGAGCTCTGTAAGATCCAAGGACACAACCGATGAATTGTCAGTGGTGGAGGCAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS CAA 72 bp | TTTGCCTCCACCACTGACAATTCATCGGTTGTGTCCTaGGATCTTACAGAGCTCTCTGAAGTTGGCAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: FASTTDNSSVVS*DLTELSEVGNF Trigger: GAAGTTGCCAACTTCAGAGAGCTCTGTAAGATCCAAGGACACAACCGATGAATTGTCAGTGGTGGAGGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS CAA 72 bp | ATGGCTCTTTTGCCTCCACCACTGACAATTCATCGGTaGTGTCCTTGGATCTTACAGAGCTCTCTGAAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: MALLPPPLTIHR*CPWILQSSLKL Trigger: CAACTTCAGAGAGCTCTGTAAGATCCAAGGACACAACCGATGAATTGTCAGTGGTGGAGGCAAAAGAGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS TCA 72 bp | AAATGGTCTTGCAGCCTGGCTGCCCTAAATGACATATaGATTCATTCTCATCATTGCCGAAAACCCCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: KWSCSLAALNDI*IHSHHCRKPQV Trigger: GACCTGGGGTTTTCGGCAATGATGAGAATGAATTCATATGTCATTTAGGGCAGCCAGGCTGCAAGACCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS CCA 72 bp | GCTAATCTGGGTCTCTTGCTCCTTGTTTTCCTTTCCTaGTACCTCCCAGTATCCAATCACATGATACAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: ANLGLLLLVFLS*YLPVSNHMIQS Trigger: ACTCTGTATCATGTGATTGGATACTGGGAGGTACCAGGAAAGGAAAACAAGGAGCAAGAGACCCAGATTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS CAA 90 bp | GAGCTCTCTGAAGTTGGCAACTTCTTTAAGAAGGAAAGTTTGTGCTaGTATATCCTCCAAAACCTCCCTAAACCCAAAAGCGCAAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ELSEVGNFFKKESLC*YILQNLPKPKSASS Trigger: GGAGCTTGCGCTTTTGGGTTTAGGGAGGTTTTGGAGGATATACAAGCACAAACTTTCCTTCTTAAAGAAGTTGCCAACTTCAGAGAGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS CAA 90 bp | AATGGCTCTTTTGCCTCCACCACTGACAATTCATCGGTTGTGTCCTaGGATCTTACAGAGCTCTCTGAAGTTGGCAACTTCTTTAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: NGSFASTTDNSSVVS*DLTELSEVGNFFKK Trigger: CTTCTTAAAGAAGTTGCCAACTTCAGAGAGCTCTGTAAGATCCAAGGACACAACCGATGAATTGTCAGTGGTGGAGGCAAAAGAGCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS CAA 72 bp | CGGTTGTGTCCTTGGATCTTACAGAGCTCTCTGAAGTaGGCAACTTCTTTAAGAAGGAAAGTTTGTGCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: RLCPWILQSSLK*ATSLRRKVCAC Trigger: ACAAGCACAAACTTTCCTTCTTAAAGAAGTTGCCAACTTCAGAGAGCTCTGTAAGATCCAAGGACACAACCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS CAA 90 bp | CTTACAGAGCTCTCTGAAGTTGGCAACTTCTTTAAGAAGGAAAGTTaGTGCTTGTATATCCTCCAAAACCTCCCTAAACCCAAAAGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: LTELSEVGNFFKKES*CLYILQNLPKPKSA Trigger: TGCGCTTTTGGGTTTAGGGAGGTTTTGGAGGATATACAAGCACAAACTTTCCTTCTTAAAGAAGTTGCCAACTTCAGAGAGCTCTGTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS CAA 90 bp | ACAATTCATCGGTTGTGTCCTTGGATCTTACAGAGCTCTCTGAAGTaGGCAACTTCTTTAAGAAGGAAAGTTTGTGCTTGTATATCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TIHRLCPWILQSSLK*ATSLRRKVCACISS Trigger: GGAGGATATACAAGCACAAACTTTCCTTCTTAAAGAAGTTGCCAACTTCAGAGAGCTCTGTAAGATCCAAGGACACAACCGATGAATTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||
| CDS GCA 72 bp | TCTGAAGTTGGCAACTTCTTTAAGAAGGAAAGTTTGTaGTTGTATATCCTCCAAAACCTCCCTAAACCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: SEVGNFFKKESL*LYILQNLPKPK Trigger: TTTGGGTTTAGGGAGGTTTTGGAGGATATACAAGCACAAACTTTCCTTCTTAAAGAAGTTGCCAACTTCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077119.8 |
||