Pregenerated sensors for GJC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043448Ensembl transcript IDs: ENSMUST00000108790.2, ENSMUST00000108793.9
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGCCAAGGGCCGAGAGTAATCAGTGCTGCTGCCTGTCCCTGACCTaGGAGTTCTCTGGCTCTGTAAGGGCCGAGGGCGCTGCAGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: EPRAESNQCCCLSLT*EFSGSVRAEGAAEE Trigger: TTCCTCTGCAGCGCCCTCGGCCCTTACAGAGCCAGAGAACTCCCAGGTCAGGGACAGGCAGCAGCACTGATTACTCTCGGCCCTTGGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| 3UTR GCA 90 bp | TCTGCCTCAAGTGGGGAGCCAAGGGCCGAGAGTAATCAGTGCTGCTaGCTGTCCCTGACCTGGGAGTTCTCTGGCTCTGTAAGGGCCGAG | + |
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Preference number: 1 (lower is better) Translates to: SASSGEPRAESNQCC*LSLTWEFSGSVRAE Trigger: CTCGGCCCTTACAGAGCCAGAGAACTCCCAGGTCAGGGACAGGCAGCAGCACTGATTACTCTCGGCCCTTGGCTCCCCACTTGAGGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| 3UTR GCA 90 bp | CAGTCTGCCTCAAGTGGGGAGCCAAGGGCCGAGAGTAATCAGTGCTaGTGCCTGTCCCTGACCTGGGAGTTCTCTGGCTCTGTAAGGGCC | + |
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Preference number: 1 (lower is better) Translates to: QSASSGEPRAESNQC*CLSLTWEFSGSVRA Trigger: GGCCCTTACAGAGCCAGAGAACTCCCAGGTCAGGGACAGGCAGCAGCACTGATTACTCTCGGCCCTTGGCTCCCCACTTGAGGCAGACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| 3UTR GCA 90 bp | GCTCAGTCTGCCTCAAGTGGGGAGCCAAGGGCCGAGAGTAATCAGTaGTGCTGCCTGTCCCTGACCTGGGAGTTCTCTGGCTCTGTAAGG | + |
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Preference number: 1 (lower is better) Translates to: AQSASSGEPRAESNQ*CCLSLTWEFSGSVR Trigger: CCTTACAGAGCCAGAGAACTCCCAGGTCAGGGACAGGCAGCAGCACTGATTACTCTCGGCCCTTGGCTCCCCACTTGAGGCAGACTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| 3UTR CCA 90 bp | GGAAGTCATACCAAACGATCTCAGCTCAGAGAGAGGAGCTGTTCTTaGTCCAGGCCTCCTTTGGGTCTCGCTCAGTCTGCCTCAAGTGGG | + |
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Preference number: 1 (lower is better) Translates to: GSHTKRSQLRERSCS*SRPPLGLAQSASSG Trigger: CCCACTTGAGGCAGACTGAGCGAGACCCAAAGGAGGCCTGGACCAAGAACAGCTCCTCTCTCTGAGCTGAGATCGTTTGGTATGACTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| 3UTR-3UTR TCA 90 bp | AGAGAGGAGCTGTTCTTGGTCCAGGCCTCCTTTGGGTCTCGCTCAGTCTGCCTCGCTGCTGCCTGTCCCTaGCCTGGGAGTTCTCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: REELFLVQASFGSRSVCLAAACP*PGSSLA Trigger: AGCCAGAGAACTCCCAGGTCAGGGACAGGCAGCAGC...GAGGCAGACTGAGCGAGACCCAAAGGAGGCCTGGACCAAGAACAGCTCCTCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| 3UTR-3UTR GCA 90 bp | CCTGACCTGGGAGTTCTCTGGCTCTGTAAGGGCCGAGGGCGCTGCAGAGGAACCTCCACTGAATCCTCATaGCAAGCCCTCCCTGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: PDLGVLWLCKGRGRCRGTSTESS*QALPEL Trigger: GAGCTCAGGGAGGGCTTGGCATGAGGATTCAGTGGA...GGTTCCTCTGCAGCGCCCTCGGCCCTTACAGAGCCAGAGAACTCCCAGGTCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| 3UTR-3UTR GCA 90 bp | GCCTCAAGTGGGGAGCCAAGGGCCGAGAGTAATCAGTGCTGCTGCCTGTCCCTGTCCACTGAATCCTCATaGCAAGCCCTCCCTGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: ASSGEPRAESNQCCCLSLSTESS*QALPEL Trigger: GAGCTCAGGGAGGGCTTGGCATGAGGATTCAGTGGA...CAGGGACAGGCAGCAGCACTGATTACTCTCGGCCCTTGGCTCCCCACTTGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGAGGAGCTGTTCTTGGTCCAGGCCTCCTTTGGGTCTCGCTCAGTCTGCCTCAGTAATCAGTGCTGCTaGCTGTCCCTGACCTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: REELFLVQASFGSRSVCLSNQCC*LSLTWE Trigger: CTCCCAGGTCAGGGACAGGCAGCAGCACTGATTACT...GAGGCAGACTGAGCGAGACCCAAAGGAGGCCTGGACCAAGAACAGCTCCTCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| 3UTR-3UTR CCA 90 bp | GCCTCAAGTGGGGAGCCAAGGGCCGAGAGTAATCAGTGCTGCTGCCTGTCCCTGTCACATATAAGACCCTaGTCACTCCCCTTCCTATCC | + |
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Preference number: 2 (lower is better) Translates to: ASSGEPRAESNQCCCLSLSHIRP*SLPFLS Trigger: GGATAGGAAGGGGAGTGACCAGGGTCTTATATGTGA...CAGGGACAGGCAGCAGCACTGATTACTCTCGGCCCTTGGCTCCCCACTTGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| 3UTR-3UTR CCA 90 bp | AGTCATACCAAACGATCTCAGCTCAGAGAGAGGAGCTGTTCTTGGTCCAGGCCTCTTGGAAGGAAGGGCTaGCAGGCCCAGCAGAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: SHTKRSQLRERSCSWSRPLGRKG*QAQQRG Trigger: ACCCCTCTGCTGGGCCTGCCAGCCCTTCCTTCCAAG...AGGCCTGGACCAAGAACAGCTCCTCTCTCTGAGCTGAGATCGTTTGGTATGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| 3UTR-3UTR CCA 90 bp | GCTCAGCATAGCCTGGAGGGGCAGTCAATTCCTAGGACACAGCTCTGTCCCCACTCACATATAAGACCCTaGTCACTCCCCTTCCTATCC | + |
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Preference number: 2 (lower is better) Translates to: AQHSLEGQSIPRTQLCPHSHIRP*SLPFLS Trigger: GGATAGGAAGGGGAGTGACCAGGGTCTTATATGTGA...GTGGGGACAGAGCTGTGTCCTAGGAATTGACTGCCCCTCCAGGCTATGCTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| 3UTR-3UTR CCA 90 bp | AGCTCTAATTTTCCAACATGGCCAACGCCACAGCCCTGGGCTACAGCTATATGCGAGAGGAGCTGTTCTTaGTCCAGGCCTCCTTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: SSNFPTWPTPQPWATAICERSCS*SRPPLG Trigger: ACCCAAAGGAGGCCTGGACCAAGAACAGCTCCTCTC...GCATATAGCTGTAGCCCAGGGCTGTGGCGTTGGCCATGTTGGAAAATTAGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| 3UTR-3UTR GCA 90 bp | AGCTCTAATTTTCCAACATGGCCAACGCCACAGCCCTGGGCTACAGCTATATGCATCCTATGGGGAAGCTaGGAGAGAGCCTTGGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: SSNFPTWPTPQPWATAICILWGS*ERALEG Trigger: TCCTTCCAAGGCTCTCTCGCAGCTTCCCCATAGGAT...GCATATAGCTGTAGCCCAGGGCTGTGGCGTTGGCCATGTTGGAAAATTAGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| 3UTR CCA 72 bp | TCAGTGCTGCTGCCTGTCCCTGACCTGGGAGTTCTCTaGCTCTGTAAGGGCCGAGGGCGCTGCAGAGGAACC | + |
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Preference number: 3 (lower is better) Translates to: SVLLPVPDLGVL*LCKGRGRCRGT Trigger: GGTTCCTCTGCAGCGCCCTCGGCCCTTACAGAGCCAGAGAACTCCCAGGTCAGGGACAGGCAGCAGCACTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| 3UTR-3UTR CAA 90 bp | TCCCTGACCTGGGAGTTCTCTGGCTCTGTAAGGGCCGAGGGCGCTGCAGAGGAAAGCTGCGAGAGAGCCTaGGAAGGAAGGGCTGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: SLTWEFSGSVRAEGAAEESCERA*EGRAGR Trigger: CCTGCCAGCCCTTCCTTCCAAGGCTCTCTCGCAGCT...TTCCTCTGCAGCGCCCTCGGCCCTTACAGAGCCAGAGAACTCCCAGGTCAGGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| 3UTR GCA 72 bp | GGGCCGAGGGCGCTGCAGAGGAACCCGGTCTGCTGCTaGAGTGAGGATAAGCTCAGTCCCCAAAAGGTTCGT | + |
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Preference number: 3 (lower is better) Translates to: GPRALQRNPVCC*SEDKLSPQKVR Trigger: ACGAACCTTTTGGGGACTGAGCTTATCCTCACTGCAGCAGCAGACCGGGTTCCTCTGCAGCGCCCTCGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| 3UTR GCA 72 bp | CTGGGAGTTCTCTGGCTCTGTAAGGGCCGAGGGCGCTaGAGAGGAACCCGGTCTGCTGCTGCAGTGAGGATA | + |
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Preference number: 3 (lower is better) Translates to: LGVLWLCKGRGR*RGTRSAAAVRI Trigger: TATCCTCACTGCAGCAGCAGACCGGGTTCCTCTGCAGCGCCCTCGGCCCTTACAGAGCCAGAGAACTCCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| 3UTR GCA 72 bp | TCAAGTGGGGAGCCAAGGGCCGAGAGTAATCAGTGCTaGTGCCTGTCCCTGACCTGGGAGTTCTCTGGCTCT | + |
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Preference number: 3 (lower is better) Translates to: SSGEPRAESNQC*CLSLTWEFSGS Trigger: AGAGCCAGAGAACTCCCAGGTCAGGGACAGGCAGCAGCACTGATTACTCTCGGCCCTTGGCTCCCCACTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| 3UTR CCA 72 bp | ACCAAACGATCTCAGCTCAGAGAGAGGAGCTGTTCTTaGTCCAGGCCTCCTTTGGGTCTCGCTCAGTCTGCC | + |
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Preference number: 3 (lower is better) Translates to: TKRSQLRERSCS*SRPPLGLAQSA Trigger: GGCAGACTGAGCGAGACCCAAAGGAGGCCTGGACCAAGAACAGCTCCTCTCTCTGAGCTGAGATCGTTTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| 3UTR-3UTR CAA 90 bp | AGAGAGGAGCTGTTCTTGGTCCAGGCCTCCTTTGGGTCTCGCTCAGTCTGCCTCATCACTGATCACTGGTaGAGGGCACAAAGATTTCCA | + |
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Preference number: 3 (lower is better) Translates to: REELFLVQASFGSRSVCLITDHW*RAQRFP Trigger: TGGAAATCTTTGTGCCCTCAACCAGTGATCAGTGAT...GAGGCAGACTGAGCGAGACCCAAAGGAGGCCTGGACCAAGAACAGCTCCTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| 3UTR-3UTR CAA 90 bp | AGTCATACCAAACGATCTCAGCTCAGAGAGAGGAGCTGTTCTTGGTCCAGGCCTATCACTGATCACTGGTaGAGGGCACAAAGATTTCCA | + |
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Preference number: 3 (lower is better) Translates to: SHTKRSQLRERSCSWSRPITDHW*RAQRFP Trigger: TGGAAATCTTTGTGCCCTCAACCAGTGATCAGTGAT...AGGCCTGGACCAAGAACAGCTCCTCTCTCTGAGCTGAGATCGTTTGGTATGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR GCA 90 bp | TCCCTGACCTGGGAGTTCTCTGGCTCTGTAAGGGCCGAGGGCGCTGCAGAGGAAGGCCCTCCCTCTGGATaGGCCGCCGCCCATCGTGCT | + |
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Preference number: 4 (lower is better) Translates to: SLTWEFSGSVRAEGAAEEGPPSG*AAAHRA Trigger: AGCACGATGGGCGGCGGCGCATCCAGAGGGAGGGCC...TTCCTCTGCAGCGCCCTCGGCCCTTACAGAGCCAGAGAACTCCCAGGTCAGGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR GCA 90 bp | CTGGGAGTTCTCTGGCTCTGTAAGGGCCGAGGGCGCTGCAGAGGAACCCGGTCTCAGCATCCTGCGCACTaGCGAGACCCAGGTGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: LGVLWLCKGRGRCRGTRSQHPAH*RDPGAP Trigger: TGGCGCACCTGGGTCTCGGCAGTGCGCAGGATGCTG...AGACCGGGTTCCTCTGCAGCGCCCTCGGCCCTTACAGAGCCAGAGAACTCCCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR GCA 90 bp | GCCTCAAGTGGGGAGCCAAGGGCCGAGAGTAATCAGTGCTGCTGCCTGTCCCTGCCGCGCACAGCATCCTaGGCACTGCCGAGACCCAGG | + |
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Preference number: 4 (lower is better) Translates to: ASSGEPRAESNQCCCLSLPRTAS*ALPRPR Trigger: CCTGGGTCTCGGCAGTGCGCAGGATGCTGTGCGCGG...CAGGGACAGGCAGCAGCACTGATTACTCTCGGCCCTTGGCTCCCCACTTGAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR GCA 90 bp | GCCTGGAGGGGCAGTCAATTCCTAGGACACAGCTCTGTCCCCACACCCTCAGGGCCGCGCACAGCATCCTaGGCACTGCCGAGACCCAGG | + |
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Preference number: 4 (lower is better) Translates to: AWRGSQFLGHSSVPTPSGPRTAS*ALPRPR Trigger: CCTGGGTCTCGGCAGTGCGCAGGATGCTGTGCGCGG...CCCTGAGGGTGTGGGGACAGAGCTGTGTCCTAGGAATTGACTGCCCCTCCAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR GCA 90 bp | CCTGACCTGGGAGTTCTCTGGCTCTGTAAGGGCCGAGGGCGCTGCAGAGGAACCTCGCGCGCGCTCAGCTaGACGCACCACCAGGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: PDLGVLWLCKGRGRCRGTSRALS*THHQAV Trigger: TACAGCCTGGTGGTGCGTGCAGCTGAGCGCGCGCGA...GGTTCCTCTGCAGCGCCCTCGGCCCTTACAGAGCCAGAGAACTCCCAGGTCAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR GCA 90 bp | TTCTCTGGCTCTGTAAGGGCCGAGGGCGCTGCAGAGGAACCCGGTCTGCTGCTGTCGCGCGCGCTCAGCTaGACGCACCACCAGGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: FSGSVRAEGAAEEPGLLLSRALS*THHQAV Trigger: TACAGCCTGGTGGTGCGTGCAGCTGAGCGCGCGCGA...CAGCAGCAGACCGGGTTCCTCTGCAGCGCCCTCGGCCCTTACAGAGCCAGAGAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR GCA 90 bp | GCCTGGAGGGGCAGTCAATTCCTAGGACACAGCTCTGTCCCCACACCCTCAGGGGCCGCCCACCCTGGGTaGCCCCCGAGAGGTTGCATT | + |
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Preference number: 4 (lower is better) Translates to: AWRGSQFLGHSSVPTPSGAAHPG*PPRGCI Trigger: AATGCAACCTCTCGGGGGGCACCCAGGGTGGGCGGC...CCCTGAGGGTGTGGGGACAGAGCTGTGTCCTAGGAATTGACTGCCCCTCCAGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR CCA 90 bp | ATAAGACCCTGGTCACTCCCCTTCCTATCCCGCAGGGAGGTACCTGAGCCAGCAGCCAGGTGGCGGCGGTaGCAGCTGCGCCCTGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: IRPWSLPFLSRREVPEPAARWRR*QLRPGQ Trigger: TTGCCCAGGGCGCAGCTGCCACCGCCGCCACCTGGC...TGCTGGCTCAGGTACCTCCCTGCGGGATAGGAAGGGGAGTGACCAGGGTCTTAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR CCA 90 bp | GCCTGGAGGGGCAGTCAATTCCTAGGACACAGCTCTGTCCCCACACCCTCAGGGATCAGGCCCTCCCTCTaGATGCGCCGCCGCCCATCG | + |
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Preference number: 4 (lower is better) Translates to: AWRGSQFLGHSSVPTPSGIRPSL*MRRRPS Trigger: CGATGGGCGGCGGCGCATCCAGAGGGAGGGCCTGAT...CCCTGAGGGTGTGGGGACAGAGCTGTGTCCTAGGAATTGACTGCCCCTCCAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR CCA 90 bp | CTGGGAGTTCTCTGGCTCTGTAAGGGCCGAGGGCGCTGCAGAGGAACCCGGTCTCACCAGGCTGTAGTCTaGAGGGCAAGCCAGGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: LGVLWLCKGRGRCRGTRSHQAVV*RASQAG Trigger: GCCGGCCTGGCTTGCCCTCCAGACTACAGCCTGGTG...AGACCGGGTTCCTCTGCAGCGCCCTCGGCCCTTACAGAGCCAGAGAACTCCCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR GCA 90 bp | GCCTCAAGTGGGGAGCCAAGGGCCGAGAGTAATCAGTGCTGCTGCCTGTCCCTGCAGCATCCTGCGCACTaGCGAGACCCAGGTGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: ASSGEPRAESNQCCCLSLQHPAH*RDPGAP Trigger: TGGCGCACCTGGGTCTCGGCAGTGCGCAGGATGCTG...CAGGGACAGGCAGCAGCACTGATTACTCTCGGCCCTTGGCTCCCCACTTGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR GCA 90 bp | CCCGCAGGGAGGTACCTGAGCCAGCACCTCCTAAGGGGCTTCAGCTCCTTCTTTGCCGCCCACCCTGGGTaGCCCCCGAGAGGTTGCATT | + |
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Preference number: 4 (lower is better) Translates to: PAGRYLSQHLLRGFSSFFAAHPG*PPRGCI Trigger: AATGCAACCTCTCGGGGGGCACCCAGGGTGGGCGGC...AAAGAAGGAGCTGAAGCCCCTTAGGAGGTGCTGGCTCAGGTACCTCCCTGCGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR GCA 90 bp | CCTGACCTGGGAGTTCTCTGGCTCTGTAAGGGCCGAGGGCGCTGCAGAGGAACCCTGCCGAGACCCAGGTaGGCCATCTCACAGAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: PDLGVLWLCKGRGRCRGTLPRPR*AISQRL Trigger: CAACCTCTGTGAGATGGCGCACCTGGGTCTCGGCAG...GGTTCCTCTGCAGCGCCCTCGGCCCTTACAGAGCCAGAGAACTCCCAGGTCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR CCA 90 bp | GCCTCAAGTGGGGAGCCAAGGGCCGAGAGTAATCAGTGCTGCTGCCTGTCCCTGACGTGGGGGCAAGGCTaGCGGCTGCAGGCAAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: ASSGEPRAESNQCCCLSLTWGQG*RLQAKK Trigger: CTTCTTTGCCTGCAGCCGCCAGCCTTGCCCCCACGT...CAGGGACAGGCAGCAGCACTGATTACTCTCGGCCCTTGGCTCCCCACTTGAGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR CCA 90 bp | TTCTCTGGCTCTGTAAGGGCCGAGGGCGCTGCAGAGGAACCCGGTCTGCTGCTGAAGCAATCCACTACGTaGGGGCAAGGCTGGCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: FSGSVRAEGAAEEPGLLLKQSTT*GQGWRL Trigger: CAGCCGCCAGCCTTGCCCCCACGTAGTGGATTGCTT...CAGCAGCAGACCGGGTTCCTCTGCAGCGCCCTCGGCCCTTACAGAGCCAGAGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR TCA 90 bp | GCCTGGAGGGGCAGTCAATTCCTAGGACACAGCTCTGTCCCCACACCCTCAGGGGCCCTAACCACCAGCTaGGCCACGTACACACGCATC | + |
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Preference number: 4 (lower is better) Translates to: AWRGSQFLGHSSVPTPSGALTTS*ATYTRI Trigger: GATGCGTGTGTACGTGGCTCAGCTGGTGGTTAGGGC...CCCTGAGGGTGTGGGGACAGAGCTGTGTCCTAGGAATTGACTGCCCCTCCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR TCA 90 bp | GCCTCAAGTGGGGAGCCAAGGGCCGAGAGTAATCAGTGCTGCTGCCTGTCCCTGGCCCTAACCACCAGCTaGGCCACGTACACACGCATC | + |
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Preference number: 4 (lower is better) Translates to: ASSGEPRAESNQCCCLSLALTTS*ATYTRI Trigger: GATGCGTGTGTACGTGGCTCAGCTGGTGGTTAGGGC...CAGGGACAGGCAGCAGCACTGATTACTCTCGGCCCTTGGCTCCCCACTTGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR GCA 90 bp | GCCTGGAGGGGCAGTCAATTCCTAGGACACAGCTCTGTCCCCACACCCTCAGGGCTGCCGAGACCCAGGTaGGCCATCTCACAGAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: AWRGSQFLGHSSVPTPSGLPRPR*AISQRL Trigger: CAACCTCTGTGAGATGGCGCACCTGGGTCTCGGCAG...CCCTGAGGGTGTGGGGACAGAGCTGTGTCCTAGGAATTGACTGCCCCTCCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR CCA 90 bp | GCCTCAAGTGGGGAGCCAAGGGCCGAGAGTAATCAGTGCTGCTGCCTGTCCCTGAAGCAATCCACTACGTaGGGGCAAGGCTGGCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: ASSGEPRAESNQCCCLSLKQSTT*GQGWRL Trigger: CAGCCGCCAGCCTTGCCCCCACGTAGTGGATTGCTT...CAGGGACAGGCAGCAGCACTGATTACTCTCGGCCCTTGGCTCCCCACTTGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR TCA 90 bp | TTCTCTGGCTCTGTAAGGGCCGAGGGCGCTGCAGAGGAACCCGGTCTGCTGCTGAGACCACCAGCACAGTaGGCCAAACTTTGCCCACGA | + |
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Preference number: 4 (lower is better) Translates to: FSGSVRAEGAAEEPGLLLRPPAQ*AKLCPR Trigger: TCGTGGGCAAAGTTTGGCTCACTGTGCTGGTGGTCT...CAGCAGCAGACCGGGTTCCTCTGCAGCGCCCTCGGCCCTTACAGAGCCAGAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR GCA 90 bp | GCCTGGAGGGGCAGTCAATTCCTAGGACACAGCTCTGTCCCCACACCCTCAGGGCGGCTGTCAGCACAATaGGGAAGACCACCAGCACAG | + |
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Preference number: 4 (lower is better) Translates to: AWRGSQFLGHSSVPTPSGRLSAQ*GRPPAQ Trigger: CTGTGCTGGTGGTCTTCCGCATTGTGCTGACAGCCG...CCCTGAGGGTGTGGGGACAGAGCTGTGTCCTAGGAATTGACTGCCCCTCCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR GCA 90 bp | AGAGAGGAGCTGTTCTTGGTCCAGGCCTCCTTTGGGTCTCGCTCAGTCTGCCTCGGCAAGGCTGGCGGCTaGAGGCAAAGAAGGGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: REELFLVQASFGSRSVCLGKAGG*RQRRVA Trigger: TGCCACCCTTCTTTGCCTGCAGCCGCCAGCCTTGCC...GAGGCAGACTGAGCGAGACCCAAAGGAGGCCTGGACCAAGAACAGCTCCTCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR CCA 90 bp | TCCCTGACCTGGGAGTTCTCTGGCTCTGTAAGGGCCGAGGGCGCTGCAGAGGAAGCAGGCAAAGAAGGGTaGCACCTCGAAGCCGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: SLTWEFSGSVRAEGAAEEAGKEG*HLEAVQ Trigger: CTGTACGGCTTCGAGGTGCCACCCTTCTTTGCCTGC...TTCCTCTGCAGCGCCCTCGGCCCTTACAGAGCCAGAGAACTCCCAGGTCAGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR GCA 90 bp | TATCCCGCAGGGAGGTACCTGAGCCAGCACCTCCTAAGGGGCTTCAGCTCCTTCCGCCAAGCGGTGGACTaGATAGCCCAGGTACATGAC | + |
|
Preference number: 4 (lower is better) Translates to: YPAGRYLSQHLLRGFSSFRQAVD*IAQVHD Trigger: GTCATGTACCTGGGCTATGCAGTCCACCGCTTGGCG...GAAGGAGCTGAAGCCCCTTAGGAGGTGCTGGCTCAGGTACCTCCCTGCGGGATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR GCA 90 bp | GCCTCAAGTGGGGAGCCAAGGGCCGAGAGTAATCAGTGCTGCTGCCTGTCCCTGCCTTGCCGTCTCTGCTaGCTGTACTGCCCTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASSGEPRAESNQCCCLSLPCRLC*LYCPFQ Trigger: CTGAAAAGGGCAGTACAGGCAGCAGAGACGGCAAGG...CAGGGACAGGCAGCAGCACTGATTACTCTCGGCCCTTGGCTCCCCACTTGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR TCA 90 bp | TATCCCGCAGGGAGGTACCTGAGCCAGCACCTCCTAAGGGGCTTCAGCTCCTTCCCCACGAAGGTGGAATaGTTGTGGATCTCCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YPAGRYLSQHLLRGFSSFPTKVE*LWISSS Trigger: GCTGGAGGAGATCCACAATCATTCCACCTTCGTGGG...GAAGGAGCTGAAGCCCCTTAGGAGGTGCTGGCTCAGGTACCTCCCTGCGGGATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR TCA 90 bp | CTATCCCGCAGGGAGGTACCTGAGCCAGCACCTCCTAAGGGGCTTCAGCTCCTTCCCACGAAGGTGGAATaGTTGTGGATCTCCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSRREVPEPAPPKGLQLLPTKVE*LWISSS Trigger: GCTGGAGGAGATCCACAATCATTCCACCTTCGTGGG...AAGGAGCTGAAGCCCCTTAGGAGGTGCTGGCTCAGGTACCTCCCTGCGGGATAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR TCA 90 bp | TGGTCACTCCCCTTCCTATCCCGCAGGGAGGTACCTGAGCCAGCACCTCCTAAGGCCGCGTGTTGCAGGTaGACTTGGATTGCTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: WSLPFLSRREVPEPAPPKAACCR*TWIAHL Trigger: CAGATGAGCAATCCAAGTTCACCTGCAACACGCGGC...CTTAGGAGGTGCTGGCTCAGGTACCTCCCTGCGGGATAGGAAGGGGAGTGACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR TCA 90 bp | CCCGCAGGGAGGTACCTGAGCCAGCACCTCCTAAGGGGCTTCAGCTCCTTCTTTGCCGCGTGTTGCAGGTaGACTTGGATTGCTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: PAGRYLSQHLLRGFSSFFAACCR*TWIAHL Trigger: CAGATGAGCAATCCAAGTTCACCTGCAACACGCGGC...AAAGAAGGAGCTGAAGCCCCTTAGGAGGTGCTGGCTCAGGTACCTCCCTGCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR GCA 90 bp | ATAAGACCCTGGTCACTCCCCTTCCTATCCCGCAGGGAGGTACCTGAGCCAGCACGGCTGTCAGCACAATaGGGAAGACCACCAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: IRPWSLPFLSRREVPEPARLSAQ*GRPPAQ Trigger: CTGTGCTGGTGGTCTTCCGCATTGTGCTGACAGCCG...TGCTGGCTCAGGTACCTCCCTGCGGGATAGGAAGGGGAGTGACCAGGGTCTTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR GCA 90 bp | ATAAGACCCTGGTCACTCCCCTTCCTATCCCGCAGGGAGGTACCTGAGCCAGCACGCCAAGCGGTGGACTaGATAGCCCAGGTACATGAC | + |
|
Preference number: 4 (lower is better) Translates to: IRPWSLPFLSRREVPEPARQAVD*IAQVHD Trigger: GTCATGTACCTGGGCTATGCAGTCCACCGCTTGGCG...TGCTGGCTCAGGTACCTCCCTGCGGGATAGGAAGGGGAGTGACCAGGGTCTTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR CCA 90 bp | CTATCCCGCAGGGAGGTACCTGAGCCAGCACCTCCTAAGGGGCTTCAGCTCCTTCCTCTAGAGCCAATATaGGCTCCGCCTCTCCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSRREVPEPAPPKGLQLLPLEPI*APPLPD Trigger: ATCTGGGAGAGGCGGAGCCCATATTGGCTCTAGAGG...AAGGAGCTGAAGCCCCTTAGGAGGTGCTGGCTCAGGTACCTCCCTGCGGGATAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR CCA 90 bp | AGTCATACCAAACGATCTCAGCTCAGAGAGAGGAGCTGTTCTTGGTCCAGGCCTATCAGGCCCTCCCTCTaGATGCGCCGCCGCCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: SHTKRSQLRERSCSWSRPIRPSL*MRRRPS Trigger: CGATGGGCGGCGGCGCATCCAGAGGGAGGGCCTGAT...AGGCCTGGACCAAGAACAGCTCCTCTCTCTGAGCTGAGATCGTTTGGTATGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR CCA 90 bp | GCTCAGCATAGCCTGGAGGGGCAGTCAATTCCTAGGACACAGCTCTGTCCCCACGCAGGCAAAGAAGGGTaGCACCTCGAAGCCGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: AQHSLEGQSIPRTQLCPHAGKEG*HLEAVQ Trigger: CTGTACGGCTTCGAGGTGCCACCCTTCTTTGCCTGC...GTGGGGACAGAGCTGTGTCCTAGGAATTGACTGCCCCTCCAGGCTATGCTGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR TCA 90 bp | TCCCTGACCTGGGAGTTCTCTGGCTCTGTAAGGGCCGAGGGCGCTGCAGAGGAACCATCTCACAGAGGTTaGGCAACAAGCATAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLTWEFSGSVRAEGAAEEPSHRG*ATSIDS Trigger: GCTGTCTATGCTTGTTGCTCAACCTCTGTGAGATGG...TTCCTCTGCAGCGCCCTCGGCCCTTACAGAGCCAGAGAACTCCCAGGTCAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR GCA 90 bp | AGAGAGGAGCTGTTCTTGGTCCAGGCCTCCTTTGGGTCTCGCTCAGTCTGCCTCCCTTGCCGTCTCTGCTaGCTGTACTGCCCTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: REELFLVQASFGSRSVCLPCRLC*LYCPFQ Trigger: CTGAAAAGGGCAGTACAGGCAGCAGAGACGGCAAGG...GAGGCAGACTGAGCGAGACCCAAAGGAGGCCTGGACCAAGAACAGCTCCTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR TCA 90 bp | GCCTGGAGGGGCAGTCAATTCCTAGGACACAGCTCTGTCCCCACACCCTCAGGGCTTGGATTGCTCATCTaGATAGATGGACTCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: AWRGSQFLGHSSVPTPSGLGLLI*IDGLTT Trigger: GGTGGTGAGTCCATCTATTCAGATGAGCAATCCAAG...CCCTGAGGGTGTGGGGACAGAGCTGTGTCCTAGGAATTGACTGCCCCTCCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR GCA 90 bp | AGTCATACCAAACGATCTCAGCTCAGAGAGAGGAGCTGTTCTTGGTCCAGGCCTGGCAAGGCTGGCGGCTaGAGGCAAAGAAGGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SHTKRSQLRERSCSWSRPGKAGG*RQRRVA Trigger: TGCCACCCTTCTTTGCCTGCAGCCGCCAGCCTTGCC...AGGCCTGGACCAAGAACAGCTCCTCTCTCTGAGCTGAGATCGTTTGGTATGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR CCA 90 bp | TCCCTGACCTGGGAGTTCTCTGGCTCTGTAAGGGCCGAGGGCGCTGCAGAGGAACTTTGCCCACGAAGGTaGAATGATTGTGGATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLTWEFSGSVRAEGAAEELCPRR*NDCGSP Trigger: AGGAGATCCACAATCATTCCACCTTCGTGGGCAAAG...TTCCTCTGCAGCGCCCTCGGCCCTTACAGAGCCAGAGAACTCCCAGGTCAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR CCA 90 bp | GCCTCAAGTGGGGAGCCAAGGGCCGAGAGTAATCAGTGCTGCTGCCTGTCCCTGCTTTGCCCACGAAGGTaGAATGATTGTGGATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ASSGEPRAESNQCCCLSLLCPRR*NDCGSP Trigger: AGGAGATCCACAATCATTCCACCTTCGTGGGCAAAG...CAGGGACAGGCAGCAGCACTGATTACTCTCGGCCCTTGGCTCCCCACTTGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR CCA 90 bp | CTATCCCGCAGGGAGGTACCTGAGCCAGCACCTCCTAAGGGGCTTCAGCTCCTTGAGATGACCACTATCTaGAAGACCCAGAAGCGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LSRREVPEPAPPKGLQLLEMTTI*KTQKRT Trigger: TGTGCGCTTCTGGGTCTTCCAGATAGTGGTCATCTC...AAGGAGCTGAAGCCCCTTAGGAGGTGCTGGCTCAGGTACCTCCCTGCGGGATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR CCA 90 bp | AGCTCTAATTTTCCAACATGGCCAACGCCACAGCCCTGGGCTACAGCTATATGCACGTGGGGGCAAGGCTaGCGGCTGCAGGCAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSNFPTWPTPQPWATAICTWGQG*RLQAKK Trigger: CTTCTTTGCCTGCAGCCGCCAGCCTTGCCCCCACGT...GCATATAGCTGTAGCCCAGGGCTGTGGCGTTGGCCATGTTGGAAAATTAGAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR TCA 90 bp | ATAAGACCCTGGTCACTCCCCTTCCTATCCCGCAGGGAGGTACCTGAGCCAGCACCATCTCACAGAGGTTaGGCAACAAGCATAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: IRPWSLPFLSRREVPEPAPSHRG*ATSIDS Trigger: GCTGTCTATGCTTGTTGCTCAACCTCTGTGAGATGG...TGCTGGCTCAGGTACCTCCCTGCGGGATAGGAAGGGGAGTGACCAGGGTCTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR TCA 90 bp | AGCTCTAATTTTCCAACATGGCCAACGCCACAGCCCTGGGCTACAGCTATATGCAGACCACCAGCACAGTaGGCCAAACTTTGCCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: SSNFPTWPTPQPWATAICRPPAQ*AKLCPR Trigger: TCGTGGGCAAAGTTTGGCTCACTGTGCTGGTGGTCT...GCATATAGCTGTAGCCCAGGGCTGTGGCGTTGGCCATGTTGGAAAATTAGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR CCA 90 bp | AGCTCTAATTTTCCAACATGGCCAACGCCACAGCCCTGGGCTACAGCTATATGCCCTCTAGAGCCAATATaGGCTCCGCCTCTCCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSNFPTWPTPQPWATAICPLEPI*APPLPD Trigger: ATCTGGGAGAGGCGGAGCCCATATTGGCTCTAGAGG...GCATATAGCTGTAGCCCAGGGCTGTGGCGTTGGCCATGTTGGAAAATTAGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR CCA 90 bp | AGCTCTAATTTTCCAACATGGCCAACGCCACAGCCCTGGGCTACAGCTATATGCGAGATGACCACTATCTaGAAGACCCAGAAGCGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SSNFPTWPTPQPWATAICEMTTI*KTQKRT Trigger: TGTGCGCTTCTGGGTCTTCCAGATAGTGGTCATCTC...GCATATAGCTGTAGCCCAGGGCTGTGGCGTTGGCCATGTTGGAAAATTAGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS CCA 90 bp | CGGTGGTGTCCGGCCAGCCAGGTGGCGGCGGTGGCAGCTGCGCCCTaGGCAAGCGCCGGGTGCCAGGGCGACGTCGGAGAGCGCGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RWCPASQVAAVAAAP*ASAGCQGDVGERVC Trigger: GCAGACGCGCTCTCCGACGTCGCCCTGGCACCCGGCGCTTGCCCAGGGCGCAGCTGCCACCGCCGCCACCTGGCTGGCCGGACACCACCG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS CCA 90 bp | CGCCTCTCCCAGATCGGTGGTGTCCGGCCAGCCAGGTGGCGGCGGTaGCAGCTGCGCCCTGGGCAAGCGCCGGGTGCCAGGGCGACGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RLSQIGGVRPARWRR*QLRPGQAPGARATS Trigger: CGACGTCGCCCTGGCACCCGGCGCTTGCCCAGGGCGCAGCTGCCACCGCCGCCACCTGGCTGGCCGGACACCACCGATCTGGGAGAGGCG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS GCA 90 bp | CGGTCCGCGGAAACCGCCGCCACCGCCGCCCCATCGCGCAACGCCTaGAGCGCTAGGTTCGCCAAGTTCTGGTCGTGCGCTCGCGCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RSAETAATAAPSRNA*SARFAKFWSCARAR Trigger: GCGCGCGCGAGCGCACGACCAGAACTTGGCGAACCTAGCGCTGCAGGCGTTGCGCGATGGGGCGGCGGTGGCGGCGGTTTCCGCGGACCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS GCA 90 bp | TGGCCAGTTGTTCCTGAGCTCCCGGCCGGCTCTGCTCCCCAACGGTaGCCCCCGACGTGGCGCTGCCGGTTCCGGAAGCTAGGCCGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: WPVVPELPAGSAPQR*PPTWRCRFRKLGRP Trigger: TGGGCGGCCTAGCTTCCGGAACCGGCAGCGCCACGTCGGGGGGCACCGTTGGGGAGCAGAGCCGGCCGGGAGCTCAGGAACAACTGGCCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS GCA 90 bp | ACACGCATCAGGCCCTCCCTCTGGATGCGCCGCCGCCCATCGTGCTaGCCGGCCGGGCCAGGAGTGACCACCGTCTTGCCATCACCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: TRIRPSLWMRRRPSC*PAGPGVTTVLPSPP Trigger: CGGAGGTGATGGCAAGACGGTGGTCACTCCTGGCCCGGCCGGGCAGCACGATGGGCGGCGGCGCATCCAGAGGGAGGGCCTGATGCGTGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS CCA 90 bp | GCCGCCCCATCGCGCAACGCCTGCAGCGCTAGGTTCGCCAAGTTCTaGTCGTGCGCTCGCGCGCGCTCAGCTGCACGCACCACCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AAPSRNACSARFAKF*SCARARSAARTTRL Trigger: CAGCCTGGTGGTGCGTGCAGCTGAGCGCGCGCGAGCGCACGACCAGAACTTGGCGAACCTAGCGCTGCAGGCGTTGCGCGATGGGGCGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS TCA 90 bp | TCTGGATGCGCCGCCGCCCATCGTGCTGCCCGGCCGGGCCAGGAGTaGCCACCGTCTTGCCATCACCTCCGCCCCCTTTGGCAGCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: SGCAAAHRAARPGQE*PPSCHHLRPLWQPH Trigger: ATGTGGCTGCCAAAGGGGGCGGAGGTGATGGCAAGACGGTGGTCACTCCTGGCCCGGCCGGGCAGCACGATGGGCGGCGGCGCATCCAGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS GCA 90 bp | TACACACGCATCAGGCCCTCCCTCTGGATGCGCCGCCGCCCATCGTaGTGCCCGGCCGGGCCAGGAGTGACCACCGTCTTGCCATCACCT | + |
|
Preference number: 5 (lower is better) Translates to: YTRIRPSLWMRRRPS*CPAGPGVTTVLPSP Trigger: AGGTGATGGCAAGACGGTGGTCACTCCTGGCCCGGCCGGGCAGCACGATGGGCGGCGGCGCATCCAGAGGGAGGGCCTGATGCGTGTGTA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS CCA 90 bp | CATCCTCCTCTAGAGCCAATATGGGCTCCGCCTCTCCCAGATCGGTaGTGTCCGGCCAGCCAGGTGGCGGCGGTGGCAGCTGCGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HPPLEPIWAPPLPDR*CPASQVAAVAAAPW Trigger: CCAGGGCGCAGCTGCCACCGCCGCCACCTGGCTGGCCGGACACCACCGATCTGGGAGAGGCGGAGCCCATATTGGCTCTAGAGGAGGATG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS CCA 90 bp | CGGGCGCCCCCGGCTCCTCGTCCTCATCCTCCTCTAGAGCCAATATaGGCTCCGCCTCTCCCAGATCGGTGGTGTCCGGCCAGCCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RAPPAPRPHPPLEPI*APPLPDRWCPASQV Trigger: CACCTGGCTGGCCGGACACCACCGATCTGGGAGAGGCGGAGCCCATATTGGCTCTAGAGGAGGATGAGGACGAGGAGCCGGGGGCGCCCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS TCA 90 bp | TGGCCCACCAGAAAGGCCACCTCGAAGGCCGCCCTAACCACCAGCTaGGCCACGTACACACGCATCAGGCCCTCCCTCTGGATGCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: WPTRKATSKAALTTS*ATYTRIRPSLWMRR Trigger: GCGGCGCATCCAGAGGGAGGGCCTGATGCGTGTGTACGTGGCTCAGCTGGTGGTTAGGGCGGCCTTCGAGGTGGCCTTTCTGGTGGGCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR CAA 90 bp | TTCTCTGGCTCTGTAAGGGCCGAGGGCGCTGCAGAGGAACCCGGTCTGCTGCTGGGAGTGACCACCGTCTaGCCATCACCTCCGCCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: FSGSVRAEGAAEEPGLLLGVTTV*PSPPPP Trigger: AGGGGGCGGAGGTGATGGCAAGACGGTGGTCACTCC...CAGCAGCAGACCGGGTTCCTCTGCAGCGCCCTCGGCCCTTACAGAGCCAGAGAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS GCA 90 bp | CCCCGACGGCCGCGCACAGCATCCTGCGCACTGCCGAGACCCAGGTaGGCCATCTCACAGAGGTTGAGCAACAAGCATAGACAGCTAACC | + |
|
Preference number: 5 (lower is better) Translates to: PRRPRTASCALPRPR*AISQRLSNKHRQLT Trigger: GGTTAGCTGTCTATGCTTGTTGCTCAACCTCTGTGAGATGGCGCACCTGGGTCTCGGCAGTGCGCAGGATGCTGTGCGCGGCCGTCGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR CAA 90 bp | TTCTCTGGCTCTGTAAGGGCCGAGGGCGCTGCAGAGGAACCCGGTCTGCTGCTGATCCACACGGTGGCCTaGCCGTCTCTGCTGCCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: FSGSVRAEGAAEEPGLLLIHTVA*PSLLPV Trigger: TACAGGCAGCAGAGACGGCAAGGCCACCGTGTGGAT...CAGCAGCAGACCGGGTTCCTCTGCAGCGCCCTCGGCCCTTACAGAGCCAGAGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
||
| CDS-3UTR CAA 90 bp | TTCTCTGGCTCTGTAAGGGCCGAGGGCGCTGCAGAGGAACCCGGTCTGCTGCTGGTTGTCACAACCCGGTaGCCGCGTGTTGCAGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: FSGSVRAEGAAEEPGLLLVVTTR*PRVAGE Trigger: TTCACCTGCAACACGCGGCAACCGGGTTGTGACAAC...CAGCAGCAGACCGGGTTCCTCTGCAGCGCCCTCGGCCCTTACAGAGCCAGAGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
||
| CDS-3UTR CAA 90 bp | AGAGAGGAGCTGTTCTTGGTCCAGGCCTCCTTTGGGTCTCGCTCAGTCTGCCTCGGAGTGACCACCGTCTaGCCATCACCTCCGCCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: REELFLVQASFGSRSVCLGVTTV*PSPPPP Trigger: AGGGGGCGGAGGTGATGGCAAGACGGTGGTCACTCC...GAGGCAGACTGAGCGAGACCCAAAGGAGGCCTGGACCAAGAACAGCTCCTCTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
||
| CDS GCA 90 bp | AGCGCGTCTGCGCTCCTGTTCCGAGGCCCGCGCCAAGCGGTGGACTaGATAGCCCAGGTACATGACAGAAGGTGTGGAGATGACCACTAT | + |
|
Preference number: 5 (lower is better) Translates to: SASALLFRGPRQAVD*IAQVHDRRCGDDHY Trigger: ATAGTGGTCATCTCCACACCTTCTGTCATGTACCTGGGCTATGCAGTCCACCGCTTGGCGCGGGCCTCGGAACAGGAGCGCAGACGCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
||
| CDS-3UTR CAA 90 bp | GCTCAGCATAGCCTGGAGGGGCAGTCAATTCCTAGGACACAGCTCTGTCCCCACATCCACACGGTGGCCTaGCCGTCTCTGCTGCCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: AQHSLEGQSIPRTQLCPHIHTVA*PSLLPV Trigger: TACAGGCAGCAGAGACGGCAAGGCCACCGTGTGGAT...GTGGGGACAGAGCTGTGTCCTAGGAATTGACTGCCCCTCCAGGCTATGCTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR CAA 90 bp | TGGTCACTCCCCTTCCTATCCCGCAGGGAGGTACCTGAGCCAGCACCTCCTAAGGCCATCTCACAGAGGTaGAGCAACAAGCATAGACAG | + |
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Preference number: 5 (lower is better) Translates to: WSLPFLSRREVPEPAPPKAISQR*SNKHRQ Trigger: CTGTCTATGCTTGTTGCTCAACCTCTGTGAGATGGC...CTTAGGAGGTGCTGGCTCAGGTACCTCCCTGCGGGATAGGAAGGGGAGTGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS TCA 90 bp | CACCACCGACGGCTGTCAGCACAATGCGGAAGACCACCAGCACAGTaGGCCAAACTTTGCCCACGAAGGTGGAATGATTGTGGATCTCCT | + |
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Preference number: 5 (lower is better) Translates to: HHRRLSAQCGRPPAQ*AKLCPRRWNDCGSP Trigger: AGGAGATCCACAATCATTCCACCTTCGTGGGCAAAGTTTGGCTCACTGTGCTGGTGGTCTTCCGCATTGTGCTGACAGCCGTCGGTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS-3UTR CAA 90 bp | AGCTCTAATTTTCCAACATGGCCAACGCCACAGCCCTGGGCTACAGCTATATGCGTTGTCACAACCCGGTaGCCGCGTGTTGCAGGTGAA | + |
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Preference number: 5 (lower is better) Translates to: SSNFPTWPTPQPWATAICVVTTR*PRVAGE Trigger: TTCACCTGCAACACGCGGCAACCGGGTTGTGACAAC...GCATATAGCTGTAGCCCAGGGCTGTGGCGTTGGCCATGTTGGAAAATTAGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS CCA 72 bp | CCGGCCAGCCAGGTGGCGGCGGTGGCAGCTGCGCCCTaGGCAAGCGCCGGGTGCCAGGGCGACGTCGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: PASQVAAVAAAP*ASAGCQGDVGE Trigger: CTCTCCGACGTCGCCCTGGCACCCGGCGCTTGCCCAGGGCGCAGCTGCCACCGCCGCCACCTGGCTGGCCGG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS GCA 72 bp | GTGGTGTCCGGCCAGCCAGGTGGCGGCGGTGGCAGCTaGGCCCTGGGCAAGCGCCGGGTGCCAGGGCGACGT | + |
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Preference number: 6 (lower is better) Translates to: VVSGQPGGGGGS*ALGKRRVPGRR Trigger: ACGTCGCCCTGGCACCCGGCGCTTGCCCAGGGCGCAGCTGCCACCGCCGCCACCTGGCTGGCCGGACACCAC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS CCA 72 bp | CAGATCGGTGGTGTCCGGCCAGCCAGGTGGCGGCGGTaGCAGCTGCGCCCTGGGCAAGCGCCGGGTGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: QIGGVRPARWRR*QLRPGQAPGAR Trigger: CCTGGCACCCGGCGCTTGCCCAGGGCGCAGCTGCCACCGCCGCCACCTGGCTGGCCGGACACCACCGATCTG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS CCA 72 bp | CGCGCGCTCAGCTGCACGCACCACCAGGCTGTAGTCTaGAGGGCAAGCCAGGCCGGCGGCCGCGGCCGGGAA | + |
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Preference number: 6 (lower is better) Translates to: RALSCTHHQAVV*RASQAGGRGRE Trigger: TTCCCGGCCGCGGCCGCCGGCCTGGCTTGCCCTCCAGACTACAGCCTGGTGGTGCGTGCAGCTGAGCGCGCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS TCA 72 bp | GCCGCCGCCCATCGTGCTGCCCGGCCGGGCCAGGAGTaGCCACCGTCTTGCCATCACCTCCGCCCCCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: AAAHRAARPGQE*PPSCHHLRPLW Trigger: CCAAAGGGGGCGGAGGTGATGGCAAGACGGTGGTCACTCCTGGCCCGGCCGGGCAGCACGATGGGCGGCGGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS GCA 72 bp | AGGCCCTCCCTCTGGATGCGCCGCCGCCCATCGTGCTaGCCGGCCGGGCCAGGAGTGACCACCGTCTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: RPSLWMRRRPSC*PAGPGVTTVLP Trigger: TGGCAAGACGGTGGTCACTCCTGGCCCGGCCGGGCAGCACGATGGGCGGCGGCGCATCCAGAGGGAGGGCCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS CAA 90 bp | CGCCGCCCATCGTGCTGCCCGGCCGGGCCAGGAGTGACCACCGTCTaGCCATCACCTCCGCCCCCTTTGGCAGCCACATCCTCCGCTCGC | + |
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Preference number: 6 (lower is better) Translates to: RRPSCCPAGPGVTTV*PSPPPPLAATSSAR Trigger: GCGAGCGGAGGATGTGGCTGCCAAAGGGGGCGGAGGTGATGGCAAGACGGTGGTCACTCCTGGCCCGGCCGGGCAGCACGATGGGCGGCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS GCA 72 bp | ATCAGGCCCTCCCTCTGGATGCGCCGCCGCCCATCGTaGTGCCCGGCCGGGCCAGGAGTGACCACCGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: IRPSLWMRRRPS*CPAGPGVTTVL Trigger: CAAGACGGTGGTCACTCCTGGCCCGGCCGGGCAGCACGATGGGCGGCGGCGCATCCAGAGGGAGGGCCTGAT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS GCA 72 bp | GCCGCTGAGGCTCCCCGACGGCCGCGCACAGCATCCTaGGCACTGCCGAGACCCAGGTGCGCCATCTCACAG | + |
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Preference number: 6 (lower is better) Translates to: AAEAPRRPRTAS*ALPRPRCAISQ Trigger: CTGTGAGATGGCGCACCTGGGTCTCGGCAGTGCGCAGGATGCTGTGCGCGGCCGTCGGGGAGCCTCAGCGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS GCA 72 bp | GTTCCTGAGCTCCCGGCCGGCTCTGCTCCCCAACGGTaGCCCCCGACGTGGCGCTGCCGGTTCCGGAAGCTA | + |
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Preference number: 6 (lower is better) Translates to: VPELPAGSAPQR*PPTWRCRFRKL Trigger: TAGCTTCCGGAACCGGCAGCGCCACGTCGGGGGGCACCGTTGGGGAGCAGAGCCGGCCGGGAGCTCAGGAAC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS GCA 72 bp | GAAACCGCCGCCACCGCCGCCCCATCGCGCAACGCCTaGAGCGCTAGGTTCGCCAAGTTCTGGTCGTGCGCT | + |
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Preference number: 6 (lower is better) Translates to: ETAATAAPSRNA*SARFAKFWSCA Trigger: AGCGCACGACCAGAACTTGGCGAACCTAGCGCTGCAGGCGTTGCGCGATGGGGCGGCGGTGGCGGCGGTTTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS GCA 72 bp | CGCCAAGTTCTGGTCGTGCGCTCGCGCGCGCTCAGCTaGACGCACCACCAGGCTGTAGTCTGGAGGGCAAGC | + |
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Preference number: 6 (lower is better) Translates to: RQVLVVRSRALS*THHQAVVWRAS Trigger: GCTTGCCCTCCAGACTACAGCCTGGTGGTGCGTGCAGCTGAGCGCGCGCGAGCGCACGACCAGAACTTGGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS GCA 72 bp | AACGCCTGCAGCGCTAGGTTCGCCAAGTTCTGGTCGTaGGCTCGCGCGCGCTCAGCTGCACGCACCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: NACSARFAKFWS*ARARSAARTTR Trigger: CCTGGTGGTGCGTGCAGCTGAGCGCGCGCGAGCGCACGACCAGAACTTGGCGAACCTAGCGCTGCAGGCGTT 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS CAA 72 bp | GGAGTGACCACCGTCTTGCCATCACCTCCGCCCCCTTaGGCAGCCACATCCTCCGCTCGCTCCTCCTCCGTG | + |
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Preference number: 6 (lower is better) Translates to: GVTTVLPSPPPP*AATSSARSSSV Trigger: CACGGAGGAGGAGCGAGCGGAGGATGTGGCTGCCAAAGGGGGCGGAGGTGATGGCAAGACGGTGGTCACTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS CCA 72 bp | CCGGCTCCTCGTCCTCATCCTCCTCTAGAGCCAATATaGGCTCCGCCTCTCCCAGATCGGTGGTGTCCGGCC | + |
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Preference number: 6 (lower is better) Translates to: PAPRPHPPLEPI*APPLPDRWCPA Trigger: GGCCGGACACCACCGATCTGGGAGAGGCGGAGCCCATATTGGCTCTAGAGGAGGATGAGGACGAGGAGCCGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS TCA 72 bp | AGAAAGGCCACCTCGAAGGCCGCCCTAACCACCAGCTaGGCCACGTACACACGCATCAGGCCCTCCCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: RKATSKAALTTS*ATYTRIRPSLW Trigger: CCAGAGGGAGGGCCTGATGCGTGTGTACGTGGCTCAGCTGGTGGTTAGGGCGGCCTTCGAGGTGGCCTTTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS GCA 72 bp | CGAAGCAATCCACTACGTGGGGGCAAGGCTGGCGGCTaGAGGCAAAGAAGGGTGGCACCTCGAAGCCGTACA | + |
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Preference number: 6 (lower is better) Translates to: RSNPLRGGKAGG*RQRRVAPRSRT Trigger: TGTACGGCTTCGAGGTGCCACCCTTCTTTGCCTGCAGCCGCCAGCCTTGCCCCCACGTAGTGGATTGCTTCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS GCA 72 bp | CCGCGCACAGCATCCTGCGCACTGCCGAGACCCAGGTaGGCCATCTCACAGAGGTTGAGCAACAAGCATAGA | + |
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Preference number: 6 (lower is better) Translates to: PRTASCALPRPR*AISQRLSNKHR Trigger: TCTATGCTTGTTGCTCAACCTCTGTGAGATGGCGCACCTGGGTCTCGGCAGTGCGCAGGATGCTGTGCGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS CAA 90 bp | GCATCCTGCGCACTGCCGAGACCCAGGTGCGCCATCTCACAGAGGTaGAGCAACAAGCATAGACAGCTAACCACGTACATGACCAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: ASCALPRPRCAISQR*SNKHRQLTTYMTSK Trigger: CTTGCTGGTCATGTACGTGGTTAGCTGTCTATGCTTGTTGCTCAACCTCTGTGAGATGGCGCACCTGGGTCTCGGCAGTGCGCAGGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS CAA 72 bp | GCACTGCCGAGACCCAGGTGCGCCATCTCACAGAGGTaGAGCAACAAGCATAGACAGCTAACCACGTACATG | + |
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Preference number: 6 (lower is better) Translates to: ALPRPRCAISQR*SNKHRQLTTYM Trigger: CATGTACGTGGTTAGCTGTCTATGCTTGTTGCTCAACCTCTGTGAGATGGCGCACCTGGGTCTCGGCAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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| CDS TCA 72 bp | CGGCTGTCAGCACAATGCGGAAGACCACCAGCACAGTaGGCCAAACTTTGCCCACGAAGGTGGAATGATTGT | + |
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Preference number: 6 (lower is better) Translates to: RLSAQCGRPPAQ*AKLCPRRWNDC Trigger: ACAATCATTCCACCTTCGTGGGCAAAGTTTGGCTCACTGTGCTGGTGGTCTTCCGCATTGTGCTGACAGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108790.2 ENSMUST00000108793.9 |
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