Pregenerated sensors for GJC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034520Ensembl transcript IDs: ENSMUST00000068933.12, ENSMUST00000092567.11, ENSMUST00000107075.9
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAACCTGAAAGTTCTGCAACTGCATTATTGCTGAGAACATGTGCCTaGGAACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCT | + |
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Preference number: 1 (lower is better) Translates to: QPESSATALLLRTCA*EHCVSLSRLIPAPP Trigger: AGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTTCCCAGGCACATGTTCTCAGCAATAATGCAGTTGCAGAACTTTCAGGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| 3UTR TCA 90 bp | CGACTCATCCCAGCTCCACCTTCAGAGTCCCCTGAGTTTGGATCATaGGCCAACAGCATCCCTGAAGATAACCAGAGCCAAATGTTTACT | + |
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Preference number: 1 (lower is better) Translates to: RLIPAPPSESPEFGS*ANSIPEDNQSQMFT Trigger: AGTAAACATTTGGCTCTGGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTGAAGGTGGAGCTGGGATGAGTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| 3UTR TCA 90 bp | GGATCTGGAAGACACAACCTGAAAGTTCTGCAACTGCATTATTGCTaGGAACATGTGCCTGGGAACACTGTGTTTCCCTCTCCCGACTCA | + |
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Preference number: 1 (lower is better) Translates to: GSGRHNLKVLQLHYC*EHVPGNTVFPSPDS Trigger: TGAGTCGGGAGAGGGAAACACAGTGTTCCCAGGCACATGTTCTCAGCAATAATGCAGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| 3UTR-3UTR TCA 90 bp | TGGGAACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCCCTGAGTTTGGATCATaGGCCAACAGCATCCCTGAA | + |
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Preference number: 2 (lower is better) Translates to: WEHCVSLSRLIPAPPSESPEFGS*ANSIPE Trigger: TTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGG...GGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| 3UTR CAA 90 bp | CTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTGCATTATaGCTGAGAACATGTGCCTGGGAACACTGTGTTTCCCTCTCCCGA | + |
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Preference number: 2 (lower is better) Translates to: LWIWKTQPESSATAL*LRTCAWEHCVSLSR Trigger: TCGGGAGAGGGAAACACAGTGTTCCCAGGCACATGTTCTCAGCAATAATGCAGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| 3UTR-3UTR TCA 90 bp | AATATATCAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTACCTTCAGAGTCCCCTaGGTTTGGATCATGAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: NISVLLWIWKTQPESSATTFRVP*VWIMSQ Trigger: TTGGCTCATGATCCAAACTCAGGGGACTCTGAAGGT...AGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTGATATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| 3UTR TCA 72 bp | AGACACAACCTGAAAGTTCTGCAACTGCATTATTGCTaGGAACATGTGCCTGGGAACACTGTGTTTCCCTCT | + |
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Preference number: 3 (lower is better) Translates to: RHNLKVLQLHYC*EHVPGNTVFPS Trigger: AGAGGGAAACACAGTGTTCCCAGGCACATGTTCTCAGCAATAATGCAGTTGCAGAACTTTCAGGTTGTGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR GCA 90 bp | AACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCCCTGGGGTTTGCTCCGAGCTaGCTTCTTGTCTGCCTCGCC | + |
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Preference number: 4 (lower is better) Translates to: NTVFPSPDSSQLHLQSPLGFAPS*LLVCLA Trigger: GGCGAGGCAGACAAGAAGGCAGCTCGGAGCAAACCC...CAGGGGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR GCA 90 bp | AACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCCCTGGGTGTTCCTCGTGGCTaGCGTACTGCTGTTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: NTVFPSPDSSQLHLQSPLGVPRG*RTAVPG Trigger: CCCAGGAACAGCAGTACGGCAGCCACGAGGAACACC...CAGGGGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR TCA 90 bp | AACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCCCTGAGGTCCAAGCGTTCCTaGGCCATTCTGATCTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: NTVFPSPDSSQLHLQSPLRSKRS*AILISR Trigger: GCGGGAGATCAGAATGGCTCAGGAACGCTTGGACCT...CAGGGGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR TCA 90 bp | TGGGAACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCGTTCCTGAGCCATTCTaGTCTCCCGCTGCAGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: WEHCVSLSRLIPAPPSESVPEPF*SPAAES Trigger: AGACTCTGCAGCGGGAGATCAGAATGGCTCAGGAAC...GGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR GCA 90 bp | TGGGAACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCTCTTCCAGAGCCCGGTaGTGTTTCCAACGCATGGCA | + |
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Preference number: 4 (lower is better) Translates to: WEHCVSLSRLIPAPPSESSSRAR*CFQRMA Trigger: TGCCATGCGTTGGAAACAGCACCGGGCTCTGGAAGA...GGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR GCA 90 bp | TGGGAACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCGCATGGCATAGGGTTTaGTCCGAGCTGCCTTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: WEHCVSLSRLIPAPPSESAWHRV*SELPSC Trigger: ACAAGAAGGCAGCTCGGAGCAAACCCTATGCCATGC...GGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR GCA 90 bp | TGGGAACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCCGTCGTCGGCCATCATaGTTAGGTTTTGGTTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: WEHCVSLSRLIPAPPSESRRRPS*LGFGWL Trigger: GAGCCAACCAAAACCTAAGCATGATGGCCGACGACG...GGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR GCA 90 bp | TGGGAACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCTCGTGGCTGCCGTACTaGTGTTCCTGGGCAATATTG | + |
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Preference number: 4 (lower is better) Translates to: WEHCVSLSRLIPAPPSESSWLPY*CSWAIL Trigger: CAATATTGCCCAGGAACAGCAGTACGGCAGCCACGA...GGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR CCA 90 bp | TGGGAACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCCCTCAAACACAGTCCTaGCCAGCAGCTGCAACACAT | + |
|
Preference number: 4 (lower is better) Translates to: WEHCVSLSRLIPAPPSESPQTQS*PAAATH Trigger: ATGTGTTGCAGCTGCTGGCCAGGACTGTGTTTGAGG...GGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR GCA 90 bp | AACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCCCTGTTCTCACAGCCCGGCTaGTCTGTGTTGCACACAAAT | + |
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Preference number: 4 (lower is better) Translates to: NTVFPSPDSSQLHLQSPLFSQPG*SVLHTN Trigger: ATTTGTGTGCAACACAGAGCAGCCGGGCTGTGAGAA...CAGGGGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR GCA 90 bp | CTTCAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCGGGTTTGCTCCGAGCTaGCTTCTTGTCTGCCTCGCC | + |
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Preference number: 4 (lower is better) Translates to: LQSPLSLDHEPTASLKITGFAPS*LLVCLA Trigger: GGCGAGGCAGACAAGAAGGCAGCTCGGAGCAAACCC...GGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR GCA 90 bp | CAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCAGAGGTGTTCCTCGTGGCTaGCGTACTGCTGTTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: QSPLSLDHEPTASLKITRGVPRG*RTAVPG Trigger: CCCAGGAACAGCAGTACGGCAGCCACGAGGAACACC...TCTGGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR TCA 90 bp | AACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCCCTGAAGCAGTCTATCTTATaGGGGCAAGGAAGTCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: NTVFPSPDSSQLHLQSPLKQSIL*GQGSLL Trigger: CAGCAGACTTCCTTGCCCTCATAAGATAGACTGCTT...CAGGGGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR TCA 90 bp | CTTCAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCAGGTCCAAGCGTTCCTaGGCCATTCTGATCTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: LQSPLSLDHEPTASLKITRSKRS*AILISR Trigger: GCGGGAGATCAGAATGGCTCAGGAACGCTTGGACCT...GGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR GCA 90 bp | AACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCCCTGGAGGGCAAGGAAGTCTaGTGCACACATAAAATGGGT | + |
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Preference number: 4 (lower is better) Translates to: NTVFPSPDSSQLHLQSPLEGKEV*CTHKMG Trigger: ACCCATTTTATGTGTGCAGCAGACTTCCTTGCCCTC...CAGGGGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR CCA 90 bp | TGGGAACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCAATGTCGAATGGTTGTaGATCTCCTCTAGCAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: WEHCVSLSRLIPAPPSESNVEWL*ISSSRR Trigger: TCGCCTGCTAGAGGAGATCCACAACCATTCGACATT...GGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR TCA 90 bp | AACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCCCTGATAGGCAGAGGCCTGTaGCACCATACATTATCAGAA | + |
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Preference number: 4 (lower is better) Translates to: NTVFPSPDSSQLHLQSPLIGRGL*HHTLSE Trigger: TTCTGATAATGTATGGTGTCACAGGCCTCTGCCTAT...CAGGGGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR TCA 90 bp | CTTCAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCGTTCCTGAGCCATTCTaGTCTCCCGCTGCAGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: LQSPLSLDHEPTASLKITVPEPF*SPAAES Trigger: AGACTCTGCAGCGGGAGATCAGAATGGCTCAGGAAC...GGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR GCA 90 bp | TGGGAACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCCCGGCTGCTCTGTGTTaGACACAAATTTGCTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: WEHCVSLSRLIPAPPSESPAALC*TQICFV Trigger: AACAAAGCAAATTTGTGTGCAACACAGAGCAGCCGG...GGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR GCA 90 bp | TGGGAACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCTTGTCTGCCTCGCCATaGTCCATTTTGGCAATCTTA | + |
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Preference number: 4 (lower is better) Translates to: WEHCVSLSRLIPAPPSESLSASP*SILAIL Trigger: TAAGATTGCCAAAATGGAGCATGGCGAGGCAGACAA...GGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR GCA 90 bp | CAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCAGATCTTCCAGAGCCCGGTaGTGTTTCCAACGCATGGCA | + |
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Preference number: 4 (lower is better) Translates to: QSPLSLDHEPTASLKITRSSRAR*CFQRMA Trigger: TGCCATGCGTTGGAAACAGCACCGGGCTCTGGAAGA...TCTGGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR GCA 90 bp | AACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCCCTGCCATACAGGAAATACTaGCCTATTAGAAAGCCCACC | + |
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Preference number: 4 (lower is better) Translates to: NTVFPSPDSSQLHLQSPLPYRKY*PIRKPT Trigger: GGTGGGCTTTCTAATAGGGCAGTATTTCCTGTATGG...CAGGGGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR CCA 90 bp | AACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCCCTGGTTCATCATAGTAGATaGACTCTCCTCCTACAGCAG | + |
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Preference number: 4 (lower is better) Translates to: NTVFPSPDSSQLHLQSPLVHHSR*TLLLQQ Trigger: CTGCTGTAGGAGGAGAGTCCATCTACTATGATGAAC...CAGGGGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR CCA 90 bp | TGGGAACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCCCGTACTGCTGTTCCTaGGCAATATTGGCTTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: WEHCVSLSRLIPAPPSESPYCCS*AILALF Trigger: AAACAAAGCCAATATTGCCCAGGAACAGCAGTACGG...GGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR TCA 90 bp | TGGGAACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCACACATAGATTTTCATaGGCCCATCCTCTCGAATTC | + |
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Preference number: 4 (lower is better) Translates to: WEHCVSLSRLIPAPPSESTHRFS*AHPLEF Trigger: GAATTCGAGAGGATGGGCTCATGAAAATCTATGTGT...GGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR GCA 90 bp | CAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCAGACGTCGTCGGCCATCATaGTTAGGTTTTGGTTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: QSPLSLDHEPTASLKITRRRRPS*LGFGWL Trigger: GAGCCAACCAAAACCTAAGCATGATGGCCGACGACG...TCTGGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR GCA 90 bp | CTTCAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCCGTCGTCGGCCATCATaGTTAGGTTTTGGTTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: LQSPLSLDHEPTASLKITRRRPS*LGFGWL Trigger: GAGCCAACCAAAACCTAAGCATGATGGCCGACGACG...GGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR GCA 90 bp | CAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCAGATCGTGGCTGCCGTACTaGTGTTCCTGGGCAATATTG | + |
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Preference number: 4 (lower is better) Translates to: QSPLSLDHEPTASLKITRSWLPY*CSWAIL Trigger: CAATATTGCCCAGGAACAGCAGTACGGCAGCCACGA...TCTGGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR GCA 90 bp | CTTCAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCTCGTGGCTGCCGTACTaGTGTTCCTGGGCAATATTG | + |
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Preference number: 4 (lower is better) Translates to: LQSPLSLDHEPTASLKITSWLPY*CSWAIL Trigger: CAATATTGCCCAGGAACAGCAGTACGGCAGCCACGA...GGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR GCA 90 bp | CAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCAGAATTCTGATCTCCCGCTaGAGAGTCTCCAGATCAGCC | + |
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Preference number: 4 (lower is better) Translates to: QSPLSLDHEPTASLKITRILISR*RVSRSA Trigger: GGCTGATCTGGAGACTCTGCAGCGGGAGATCAGAAT...TCTGGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR GCA 90 bp | CTTCAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCATTCTGATCTCCCGCTaGAGAGTCTCCAGATCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LQSPLSLDHEPTASLKITILISR*RVSRSA Trigger: GGCTGATCTGGAGACTCTGCAGCGGGAGATCAGAAT...GGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR CCA 90 bp | CTTCAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCGCAACCAGGATGATCTaGAATACCCAGAAGCGCACG | + |
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Preference number: 4 (lower is better) Translates to: LQSPLSLDHEPTASLKITATRMI*NTQKRT Trigger: CGTGCGCTTCTGGGTATTCCAGATCATCCTGGTTGC...GGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR CCA 90 bp | CAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCAGACCTCAAACACAGTCCTaGCCAGCAGCTGCAACACAT | + |
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Preference number: 4 (lower is better) Translates to: QSPLSLDHEPTASLKITRPQTQS*PAAATH Trigger: ATGTGTTGCAGCTGCTGGCCAGGACTGTGTTTGAGG...TCTGGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR TCA 90 bp | CAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCAGAGAGTTGCAACCAGGATaGTCTGGAATACCCAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: QSPLSLDHEPTASLKITRELQPG*SGIPRS Trigger: GCTTCTGGGTATTCCAGATCATCCTGGTTGCAACTC...TCTGGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR TCA 90 bp | TGGGAACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCAGGGTGTGTTCCAAGTaGAAGGATAATTATAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: WEHCVSLSRLIPAPPSESRVCSK*KDNYKH Trigger: GTGCTTATAATTATCCTTTCACTTGGAACACACCCT...GGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR TCA 90 bp | AACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCCCTGAGGGTGTGTTCCAAGTaGAAGGATAATTATAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NTVFPSPDSSQLHLQSPLRVCSK*KDNYKH Trigger: GTGCTTATAATTATCCTTTCACTTGGAACACACCCT...CAGGGGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCAGATTCTCACAGCCCGGCTaGTCTGTGTTGCACACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QSPLSLDHEPTASLKITRFSQPG*SVLHTN Trigger: ATTTGTGTGCAACACAGAGCAGCCGGGCTGTGAGAA...TCTGGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR GCA 90 bp | CTTCAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCAGCTGCCTTCTTGTCTaGCTCGCCATGCTCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LQSPLSLDHEPTASLKITSCLLV*LAMLHF Trigger: AAAATGGAGCATGGCGAGGCAGACAAGAAGGCAGCT...GGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCAGATGTTGGACCCAGATTTaGACCCCACTTTGGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSPLSLDHEPTASLKITRCWTQI*TPLWPS Trigger: AGAAGGCCAAAGTGGGGTCCAAATCTGGGTCCAACA...TCTGGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR TCA 90 bp | CTTCAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCAGACAATCAGCACAGTaGGCCAGATCTTCCCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: LQSPLSLDHEPTASLKITRQSAQ*ARSSLQ Trigger: TTGTAGGGAAGATCTGGCTCACTGTGCTGATTGTCT...GGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR TCA 90 bp | CTTCAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCAAGCAGTCTATCTTATaGGGGCAAGGAAGTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQSPLSLDHEPTASLKITKQSIL*GQGSLL Trigger: CAGCAGACTTCCTTGCCCTCATAAGATAGACTGCTT...GGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCAGAGGCAAGGAAGTCTGCTaGACACATAAAATGGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QSPLSLDHEPTASLKITRGKEVC*THKMGG Trigger: TCCACCCATTTTATGTGTGCAGCAGACTTCCTTGCC...TCTGGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCAGAGAGGGCAAGGAAGTCTaGTGCACACATAAAATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QSPLSLDHEPTASLKITREGKEV*CTHKMG Trigger: ACCCATTTTATGTGTGCAGCAGACTTCCTTGCCCTC...TCTGGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CCA 90 bp | CTTCAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCAATGTCGAATGGTTGTaGATCTCCTCTAGCAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LQSPLSLDHEPTASLKITNVEWL*ISSSRR Trigger: TCGCCTGCTAGAGGAGATCCACAACCATTCGACATT...GGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CCA 90 bp | AACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCCCTGATCATGCTTAGGTTTTaGTTGGCTCTGCTCTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: NTVFPSPDSSQLHLQSPLIMLRF*LALLFI Trigger: AATAAAGAGCAGAGCCAACCAAAACCTAAGCATGAT...CAGGGGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR TCA 90 bp | CAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCAGAATAGGCAGAGGCCTGTaGCACCATACATTATCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QSPLSLDHEPTASLKITRIGRGL*HHTLSE Trigger: TTCTGATAATGTATGGTGTCACAGGCCTCTGCCTAT...TCTGGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR TCA 90 bp | CAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCAGAGGATCTGATCTGGTTTaGCAGCAATGTTATAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QSPLSLDHEPTASLKITRGSDLV*QQCYSQ Trigger: CTGGCTATAACATTGCTGTCAAACCAGATCAGATCC...TCTGGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCAGATTGTCTGCCTCGCCATaGTCCATTTTGGCAATCTTA | + |
|
Preference number: 4 (lower is better) Translates to: QSPLSLDHEPTASLKITRLSASP*SILAIL Trigger: TAAGATTGCCAAAATGGAGCATGGCGAGGCAGACAA...TCTGGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR GCA 90 bp | AATATATCAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTGGGTTTGCTCCGAGCTaGCTTCTTGTCTGCCTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: NISVLLWIWKTQPESSATGFAPS*LLVCLA Trigger: GGCGAGGCAGACAAGAAGGCAGCTCGGAGCAAACCC...AGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTGATATATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR GCA 90 bp | CTTCAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCCCATACAGGAAATACTaGCCTATTAGAAAGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LQSPLSLDHEPTASLKITPYRKY*PIRKPT Trigger: GGTGGGCTTTCTAATAGGGCAGTATTTCCTGTATGG...GGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR GCA 90 bp | AATATATCAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTGGTGTTCCTCGTGGCTaGCGTACTGCTGTTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NISVLLWIWKTQPESSATGVPRG*RTAVPG Trigger: CCCAGGAACAGCAGTACGGCAGCCACGAGGAACACC...AGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTGATATATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCAGACCTACAAATGTCGAATaGTTGTGGATCTCCTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSPLSLDHEPTASLKITRPTNVE*LWISSS Trigger: GCTAGAGGAGATCCACAACCATTCGACATTTGTAGG...TCTGGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCAGAATAGGATCCTCTTCATaGTCCTCTTCCGTTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QSPLSLDHEPTASLKITRIGSSS*SSSVSS Trigger: GGAAGAAACGGAAGAGGACCATGAAGAGGATCCTAT...TCTGGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CCA 90 bp | CTTCAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCCCGTACTGCTGTTCCTaGGCAATATTGGCTTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LQSPLSLDHEPTASLKITPYCCS*AILALF Trigger: AAACAAAGCCAATATTGCCCAGGAACAGCAGTACGG...GGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CCA 90 bp | AATATATCAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTGGGAGGTGTTCCTCGTaGCTGCCGTACTGCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NISVLLWIWKTQPESSATGRCSS*LPYCCS Trigger: GGAACAGCAGTACGGCAGCCACGAGGAACACCTCCC...AGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTGATATATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR TCA 90 bp | CAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCAGAACACATAGATTTTCATaGGCCCATCCTCTCGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: QSPLSLDHEPTASLKITRTHRFS*AHPLEF Trigger: GAATTCGAGAGGATGGGCTCATGAAAATCTATGTGT...TCTGGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR GCA 90 bp | CAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTGCATTATGCATGGCATAGGGTTTaGTCCGAGCTGCCTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QFFSGSGRHNLKVLQLHYAWHRV*SELPSC Trigger: ACAAGAAGGCAGCTCGGAGCAAACCCTATGCCATGC...ATAATGCAGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CCA 90 bp | CAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTGCATTATCCTCAAACACAGTCCTaGCCAGCAGCTGCAACACAT | + |
|
Preference number: 4 (lower is better) Translates to: QFFSGSGRHNLKVLQLHYPQTQS*PAAATH Trigger: ATGTGTTGCAGCTGCTGGCCAGGACTGTGTTTGAGG...ATAATGCAGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR TCA 90 bp | CAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTGCATTATGAGTTGCAACCAGGATaGTCTGGAATACCCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QFFSGSGRHNLKVLQLHYELQPG*SGIPRS Trigger: GCTTCTGGGTATTCCAGATCATCCTGGTTGCAACTC...ATAATGCAGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR TCA 90 bp | CTTCAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCAGGGTGTGTTCCAAGTaGAAGGATAATTATAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LQSPLSLDHEPTASLKITRVCSK*KDNYKH Trigger: GTGCTTATAATTATCCTTTCACTTGGAACACACCCT...GGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR TCA 90 bp | AATATATCAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTGTTCCTGAGCCATTCTaGTCTCCCGCTGCAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NISVLLWIWKTQPESSATVPEPF*SPAAES Trigger: AGACTCTGCAGCGGGAGATCAGAATGGCTCAGGAAC...AGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTGATATATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR GCA 90 bp | CAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTGCATTATAGCTGCCTTCTTGTCTaGCTCGCCATGCTCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: QFFSGSGRHNLKVLQLHYSCLLV*LAMLHF Trigger: AAAATGGAGCATGGCGAGGCAGACAAGAAGGCAGCT...ATAATGCAGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR GCA 90 bp | AATATATCAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTTCTTCCAGAGCCCGGTaGTGTTTCCAACGCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NISVLLWIWKTQPESSATSSRAR*CFQRMA Trigger: TGCCATGCGTTGGAAACAGCACCGGGCTCTGGAAGA...AGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTGATATATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CCA 90 bp | CAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTGCATTATTGTTGGACCCAGATTTaGACCCCACTTTGGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QFFSGSGRHNLKVLQLHYCWTQI*TPLWPS Trigger: AGAAGGCCAAAGTGGGGTCCAAATCTGGGTCCAACA...ATAATGCAGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR TCA 90 bp | CAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTGCATTATAGACAATCAGCACAGTaGGCCAGATCTTCCCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: QFFSGSGRHNLKVLQLHYRQSAQ*ARSSLQ Trigger: TTGTAGGGAAGATCTGGCTCACTGTGCTGATTGTCT...ATAATGCAGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR TCA 90 bp | CAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCAGAATTTTGGCAATCTTATaGATAGCATATCCCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QSPLSLDHEPTASLKITRILAIL*IAYPRY Trigger: GTACCTGGGATATGCTATTCATAAGATTGCCAAAAT...TCTGGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR TCA 90 bp | CAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTGCATTATAAGCAGTCTATCTTATaGGGGCAAGGAAGTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QFFSGSGRHNLKVLQLHYKQSIL*GQGSLL Trigger: CAGCAGACTTCCTTGCCCTCATAAGATAGACTGCTT...ATAATGCAGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR GCA 90 bp | CAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTGCATTATGGCAAGGAAGTCTGCTaGACACATAAAATGGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QFFSGSGRHNLKVLQLHYGKEVC*THKMGG Trigger: TCCACCCATTTTATGTGTGCAGCAGACTTCCTTGCC...ATAATGCAGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR GCA 90 bp | AATATATCAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTATTCTGATCTCCCGCTaGAGAGTCTCCAGATCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NISVLLWIWKTQPESSATILISR*RVSRSA Trigger: GGCTGATCTGGAGACTCTGCAGCGGGAGATCAGAAT...AGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTGATATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CCA 90 bp | CAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTGCATTATAATGTCGAATGGTTGTaGATCTCCTCTAGCAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: QFFSGSGRHNLKVLQLHYNVEWL*ISSSRR Trigger: TCGCCTGCTAGAGGAGATCCACAACCATTCGACATT...ATAATGCAGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR TCA 90 bp | CAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTGCATTATATAGGCAGAGGCCTGTaGCACCATACATTATCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QFFSGSGRHNLKVLQLHYIGRGL*HHTLSE Trigger: TTCTGATAATGTATGGTGTCACAGGCCTCTGCCTAT...ATAATGCAGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR TCA 90 bp | CAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTGCATTATGGATCTGATCTGGTTTaGCAGCAATGTTATAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QFFSGSGRHNLKVLQLHYGSDLV*QQCYSQ Trigger: CTGGCTATAACATTGCTGTCAAACCAGATCAGATCC...ATAATGCAGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR TCA 90 bp | CAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTGCATTATTCAGTGTACTGGATCTaGTCTGGTTTGACAGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: QFFSGSGRHNLKVLQLHYSVYWI*SGLTAM Trigger: CATTGCTGTCAAACCAGATCAGATCCAGTACACTGA...ATAATGCAGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR GCA 90 bp | AATATATCAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTTTCTCACAGCCCGGCTaGTCTGTGTTGCACACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: NISVLLWIWKTQPESSATFSQPG*SVLHTN Trigger: ATTTGTGTGCAACACAGAGCAGCCGGGCTGTGAGAA...AGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTGATATATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR GCA 90 bp | CAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTGCATTATCCATACAGGAAATACTaGCCTATTAGAAAGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: QFFSGSGRHNLKVLQLHYPYRKY*PIRKPT Trigger: GGTGGGCTTTCTAATAGGGCAGTATTTCCTGTATGG...ATAATGCAGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CCA 90 bp | CAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTGCATTATATAGGATCCTCTTCATaGTCCTCTTCCGTTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QFFSGSGRHNLKVLQLHYIGSSS*SSSVSS Trigger: GGAAGAAACGGAAGAGGACCATGAAGAGGATCCTAT...ATAATGCAGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR TCA 90 bp | AATATATCAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTAGACAATCAGCACAGTaGGCCAGATCTTCCCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: NISVLLWIWKTQPESSATRQSAQ*ARSSLQ Trigger: TTGTAGGGAAGATCTGGCTCACTGTGCTGATTGTCT...AGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTGATATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR GCA 90 bp | AATATATCAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTGGCAAGGAAGTCTGCTaGACACATAAAATGGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NISVLLWIWKTQPESSATGKEVC*THKMGG Trigger: TCCACCCATTTTATGTGTGCAGCAGACTTCCTTGCC...AGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTGATATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR TCA 90 bp | AATATATCAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTTCAGTGTACTGGATCTaGTCTGGTTTGACAGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: NISVLLWIWKTQPESSATSVYWI*SGLTAM Trigger: CATTGCTGTCAAACCAGATCAGATCCAGTACACTGA...AGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTGATATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR GCA 90 bp | AATATATCAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTCCGGCTGCTCTGTGTTaGACACAAATTTGCTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NISVLLWIWKTQPESSATPAALC*TQICFV Trigger: AACAAAGCAAATTTGTGTGCAACACAGAGCAGCCGG...AGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTGATATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR GCA 90 bp | AATATATCAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTTTGTCTGCCTCGCCATaGTCCATTTTGGCAATCTTA | + |
|
Preference number: 4 (lower is better) Translates to: NISVLLWIWKTQPESSATLSASP*SILAIL Trigger: TAAGATTGCCAAAATGGAGCATGGCGAGGCAGACAA...AGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTGATATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CCA 90 bp | AATATATCAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTCCTACAAATGTCGAATaGTTGTGGATCTCCTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: NISVLLWIWKTQPESSATPTNVE*LWISSS Trigger: GCTAGAGGAGATCCACAACCATTCGACATTTGTAGG...AGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTGATATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CCA 90 bp | AATATATCAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTGTTCATCATAGTAGATaGACTCTCCTCCTACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NISVLLWIWKTQPESSATVHHSR*TLLLQQ Trigger: CTGCTGTAGGAGGAGAGTCCATCTACTATGATGAAC...AGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTGATATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CCA 90 bp | AATATATCAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTATAGGATCCTCTTCATaGTCCTCTTCCGTTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NISVLLWIWKTQPESSATIGSSS*SSSVSS Trigger: GGAAGAAACGGAAGAGGACCATGAAGAGGATCCTAT...AGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTGATATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CCA 90 bp | AATATATCAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTCCGTACTGCTGTTCCTaGGCAATATTGGCTTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NISVLLWIWKTQPESSATPYCCS*AILALF Trigger: AAACAAAGCCAATATTGCCCAGGAACAGCAGTACGG...AGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTGATATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR TCA 90 bp | AATATATCAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTATTTTGGCAATCTTATaGATAGCATATCCCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: NISVLLWIWKTQPESSATILAIL*IAYPRY Trigger: GTACCTGGGATATGCTATTCATAAGATTGCCAAAAT...AGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTGATATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CCA 90 bp | AATATATCAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTATCATGCTTAGGTTTTaGTTGGCTCTGCTCTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: NISVLLWIWKTQPESSATIMLRF*LALLFI Trigger: AATAAAGAGCAGAGCCAACCAAAACCTAAGCATGAT...AGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTGATATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS TCA 90 bp | GATGGTAGGCCTGGATTGCTAGGTCCAAGCGTTCCTGAGCCATTCTaGTCTCCCGCTGCAGAGTCTCCAGATCAGCCGGGAGGTGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: DGRPGLLGPSVPEPF*SPAAESPDQPGGVP Trigger: AGGAACACCTCCCGGCTGATCTGGAGACTCTGCAGCGGGAGATCAGAATGGCTCAGGAACGCTTGGACCTAGCAATCCAGGCCTACCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS CCA 90 bp | GGTCCTCTTCCGTTTCTTCCAGAGCCCGGTGCTGTTTCCAACGCATaGCATAGGGTTTGCTCCGAGCTGCCTTCTTGTCTGCCTCGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GPLPFLPEPGAVSNA*HRVCSELPSCLPRH Trigger: ATGGCGAGGCAGACAAGAAGGCAGCTCGGAGCAAACCCTATGCCATGCGTTGGAAACAGCACCGGGCTCTGGAAGAAACGGAAGAGGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS CCA 90 bp | ATCTCCCGCTGCAGAGTCTCCAGATCAGCCGGGAGGTGTTCCTCGTaGCTGCCGTACTGCTGTTCCTGGGCAATATTGGCTTTGTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: ISRCRVSRSAGRCSS*LPYCCSWAILALFC Trigger: GCAAAACAAAGCCAATATTGCCCAGGAACAGCAGTACGGCAGCCACGAGGAACACCTCCCGGCTGATCTGGAGACTCTGCAGCGGGAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS GCA 90 bp | TTTCTTCCAGAGCCCGGTGCTGTTTCCAACGCATGGCATAGGGTTTaGTCCGAGCTGCCTTCTTGTCTGCCTCGCCATGCTCCATTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: FLPEPGAVSNAWHRV*SELPSCLPRHAPFW Trigger: CCAAAATGGAGCATGGCGAGGCAGACAAGAAGGCAGCTCGGAGCAAACCCTATGCCATGCGTTGGAAACAGCACCGGGCTCTGGAAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CAA 90 bp | AACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCCCTGGATTTGGACCCCACTTaGGCCTTCTTTTCCCGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NTVFPSPDSSQLHLQSPLDLDPT*AFFSRG Trigger: TCCTCGGGAAAAGAAGGCCAAAGTGGGGTCCAAATC...CAGGGGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CAA 90 bp | AACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCCCTGTTGTTGGACCCAGATTaGGACCCCACTTTGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NTVFPSPDSSQLHLQSPLLLDPD*DPTLAF Trigger: GAAGGCCAAAGTGGGGTCCAAATCTGGGTCCAACAA...CAGGGGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS GCA 90 bp | AGCCCGGTGCTGTTTCCAACGCATGGCATAGGGTTTGCTCCGAGCTaGCTTCTTGTCTGCCTCGCCATGCTCCATTTTGGCAATCTTATG | + |
|
Preference number: 5 (lower is better) Translates to: SPVLFPTHGIGFAPS*LLVCLAMLHFGNLM Trigger: CATAAGATTGCCAAAATGGAGCATGGCGAGGCAGACAAGAAGGCAGCTCGGAGCAAACCCTATGCCATGCGTTGGAAACAGCACCGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CAA 90 bp | AACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCCCTGCCCGGCTGCTCTGTGTaGCACACAAATTTGCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: NTVFPSPDSSQLHLQSPLPGCSV*HTNLLC Trigger: ACAAAGCAAATTTGTGTGCAACACAGAGCAGCCGGG...CAGGGGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CAA 90 bp | TGGGAACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCTTAGTGAGTCTCGAATaGTCCCAAACCCTAAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: WEHCVSLSRLIPAPPSESLVSLE*SQTLSE Trigger: TTCACTTAGGGTTTGGGACAATTCGAGACTCACTAA...GGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR CAA 90 bp | CAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCAGAACCATGGGGGTTGTTTaGGTGATGGTAGGCCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: QSPLSLDHEPTASLKITRTMGVV*VMVGLD Trigger: ATCCAGGCCTACCATCACCAAAACAACCCCCATGGT...TCTGGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR CAA 90 bp | CAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCAGAGATTTGGACCCCACTTaGGCCTTCTTTTCCCGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QSPLSLDHEPTASLKITRDLDPT*AFFSRG Trigger: TCCTCGGGAAAAGAAGGCCAAAGTGGGGTCCAAATC...TCTGGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CAA 90 bp | CTTCAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCGATTTGGACCCCACTTaGGCCTTCTTTTCCCGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LQSPLSLDHEPTASLKITDLDPT*AFFSRG Trigger: TCCTCGGGAAAAGAAGGCCAAAGTGGGGTCCAAATC...GGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CAA 90 bp | AACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCCCTGTTCCCATCCCCTGATTaGCTACTAATACTGCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: NTVFPSPDSSQLHLQSPLFPSPD*LLILLL Trigger: CAAAAGCAGTATTAGTAGCAAATCAGGGGATGGGAA...CAGGGGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS TCA 90 bp | GCTGCCTTCTTGTCTGCCTCGCCATGCTCCATTTTGGCAATCTTATaGATAGCATATCCCAGGTACATCACAGAGGGAGTTGCAACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AAFLSASPCSILAIL*IAYPRYITEGVATR Trigger: CCTGGTTGCAACTCCCTCTGTGATGTACCTGGGATATGCTATTCATAAGATTGCCAAAATGGAGCATGGCGAGGCAGACAAGAAGGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS CCA 90 bp | TCGCTTTCTAACTCCATCTCTGGATACATCATAGGATCCTCTTCATaGTCCTCTTCCGTTTCTTCCAGAGCCCGGTGCTGTTTCCAACGC | + |
|
Preference number: 5 (lower is better) Translates to: SLSNSISGYIIGSSS*SSSVSSRARCCFQR Trigger: GCGTTGGAAACAGCACCGGGCTCTGGAAGAAACGGAAGAGGACCATGAAGAGGATCCTATGATGTATCCAGAGATGGAGTTAGAAAGCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCAGACCCGGCTGCTCTGTGTaGCACACAAATTTGCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: QSPLSLDHEPTASLKITRPGCSV*HTNLLC Trigger: ACAAAGCAAATTTGTGTGCAACACAGAGCAGCCGGG...TCTGGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR CAA 90 bp | TGGGAACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCATGCTTAGGTTTTGGTaGGCTCTGCTCTTTATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: WEHCVSLSRLIPAPPSESMLRFW*ALLFIF Trigger: GAAAATAAAGAGCAGAGCCAACCAAAACCTAAGCAT...GGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS GCA 90 bp | TTTCCAACGCATGGCATAGGGTTTGCTCCGAGCTGCCTTCTTGTCTaGCTCGCCATGCTCCATTTTGGCAATCTTATGAATAGCATATCC | + |
|
Preference number: 5 (lower is better) Translates to: FPTHGIGFAPSCLLV*LAMLHFGNLMNSIS Trigger: GGATATGCTATTCATAAGATTGCCAAAATGGAGCATGGCGAGGCAGACAAGAAGGCAGCTCGGAGCAAACCCTATGCCATGCGTTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS CCA 90 bp | GTAGGCAATCTTAGCATTGGACAGCTCAGTGTACTGGATCTGATCTaGTTTGACAGCAATGTTATAGCCAGGGGGAGCAGAGGGTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: VGNLSIGQLSVLDLI*FDSNVIARGSRGCV Trigger: AACACACCCTCTGCTCCCCCTGGCTATAACATTGCTGTCAAACCAGATCAGATCCAGTACACTGAGCTGTCCAATGCTAAGATTGCCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CAA 90 bp | AACACTGTGTTTCCCTCTCCCGACTCATCCCAGCTCCACCTTCAGAGTCCCCTGGCACACAAATTTGCTTaGTTCATCATAGTAGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: NTVFPSPDSSQLHLQSPLAHKFA*FIIVDG Trigger: TCCATCTACTATGATGAACAAAGCAAATTTGTGTGC...CAGGGGACTCTGAAGGTGGAGCTGGGATGAGTCGGGAGAGGGAAACACAGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCAGATTAGTGAGTCTCGAATaGTCCCAAACCCTAAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: QSPLSLDHEPTASLKITRLVSLE*SQTLSE Trigger: TTCACTTAGGGTTTGGGACAATTCGAGACTCACTAA...TCTGGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CAA 90 bp | CAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTGCATTATACCATGGGGGTTGTTTaGGTGATGGTAGGCCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: QFFSGSGRHNLKVLQLHYTMGVV*VMVGLD Trigger: ATCCAGGCCTACCATCACCAAAACAACCCCCATGGT...ATAATGCAGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CAA 90 bp | CAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTGCATTATTTGTTGGACCCAGATTaGGACCCCACTTTGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QFFSGSGRHNLKVLQLHYLLDPD*DPTLAF Trigger: GAAGGCCAAAGTGGGGTCCAAATCTGGGTCCAACAA...ATAATGCAGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CAA 90 bp | CTTCAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCCTACTAATACTGCTTTaGTTGGACCCAGATTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LQSPLSLDHEPTASLKITLLILL*LDPDLD Trigger: GTCCAAATCTGGGTCCAACAAAAGCAGTATTAGTAG...GGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCAGATTCCCATCCCCTGATTaGCTACTAATACTGCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QSPLSLDHEPTASLKITRFPSPD*LLILLL Trigger: CAAAAGCAGTATTAGTAGCAAATCAGGGGATGGGAA...TCTGGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS TCA 90 bp | CTCCTTTTACTGTTTAGTGAGTCTCGAATTGTCCCAAACCCTAAGTaGAGCATCTCCCAAATGTTAAGCAATAGGCAGAGGCCTGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: LLLLFSESRIVPNPK*SISQMLSNRQRPVT Trigger: TGTCACAGGCCTCTGCCTATTGCTTAACATTTGGGAGATGCTTCACTTAGGGTTTGGGACAATTCGAGACTCACTAAACAGTAAAAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CAA 90 bp | CTTCAGAGTCCCCTGAGTTTGGATCATGAGCCAACAGCATCCCTGAAGATAACCAATATTGGCTTTGTTTaGCTTGTAGGCAATCTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LQSPLSLDHEPTASLKITNIGFV*LVGNLS Trigger: GCTAAGATTGCCTACAAGCAAAACAAAGCCAATATT...GGTTATCTTCAGGGATGCTGTTGGCTCATGATCCAAACTCAGGGGACTCTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS CCA 90 bp | GCTGCTCTGTGTTGCACACAAATTTGCTTTGTTCATCATAGTAGATaGACTCTCCTCCTACAGCAGTTAGGACAATTCGAAAGACAATCA | + |
|
Preference number: 5 (lower is better) Translates to: AALCCTQICFVHHSR*TLLLQQLGQFERQS Trigger: TGATTGTCTTTCGAATTGTCCTAACTGCTGTAGGAGGAGAGTCCATCTACTATGATGAACAAAGCAAATTTGTGTGCAACACAGAGCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CAA 90 bp | CAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTGCATTATCTACTAATACTGCTTTaGTTGGACCCAGATTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: QFFSGSGRHNLKVLQLHYLLILL*LDPDLD Trigger: GTCCAAATCTGGGTCCAACAAAAGCAGTATTAGTAG...ATAATGCAGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
||
| CDS-3UTR CAA 90 bp | CAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTGCATTATGCACACAAATTTGCTTaGTTCATCATAGTAGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: QFFSGSGRHNLKVLQLHYAHKFA*FIIVDG Trigger: TCCATCTACTATGATGAACAAAGCAAATTTGTGTGC...ATAATGCAGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR CAA 90 bp | AATATATCAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTTTAGTGAGTCTCGAATaGTCCCAAACCCTAAGTGAA | + |
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Preference number: 5 (lower is better) Translates to: NISVLLWIWKTQPESSATLVSLE*SQTLSE Trigger: TTCACTTAGGGTTTGGGACAATTCGAGACTCACTAA...AGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTGATATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR CAA 90 bp | CAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTGCATTATAATATTGGCTTTGTTTaGCTTGTAGGCAATCTTAGC | + |
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Preference number: 5 (lower is better) Translates to: QFFSGSGRHNLKVLQLHYNIGFV*LVGNLS Trigger: GCTAAGATTGCCTACAAGCAAAACAAAGCCAATATT...ATAATGCAGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS-3UTR CAA 90 bp | AATATATCAGTTCTTCTCTGGATCTGGAAGACACAACCTGAAAGTTCTGCAACTTTCCCATCCCCTGATTaGCTACTAATACTGCTTTTG | + |
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Preference number: 5 (lower is better) Translates to: NISVLLWIWKTQPESSATFPSPD*LLILLL Trigger: CAAAAGCAGTATTAGTAGCAAATCAGGGGATGGGAA...AGTTGCAGAACTTTCAGGTTGTGTCTTCCAGATCCAGAGAAGAACTGATATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS GCA 72 bp | GAGCCCGGTGCTGTTTCCAACGCATGGCATAGGGTTTaGTCCGAGCTGCCTTCTTGTCTGCCTCGCCATGCT | + |
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Preference number: 6 (lower is better) Translates to: EPGAVSNAWHRV*SELPSCLPRHA Trigger: AGCATGGCGAGGCAGACAAGAAGGCAGCTCGGAGCAAACCCTATGCCATGCGTTGGAAACAGCACCGGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS TCA 72 bp | CCTGGATTGCTAGGTCCAAGCGTTCCTGAGCCATTCTaGTCTCCCGCTGCAGAGTCTCCAGATCAGCCGGGA | + |
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Preference number: 6 (lower is better) Translates to: PGLLGPSVPEPF*SPAAESPDQPG Trigger: TCCCGGCTGATCTGGAGACTCTGCAGCGGGAGATCAGAATGGCTCAGGAACGCTTGGACCTAGCAATCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS CCA 72 bp | TGCAGAGTCTCCAGATCAGCCGGGAGGTGTTCCTCGTaGCTGCCGTACTGCTGTTCCTGGGCAATATTGGCT | + |
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Preference number: 6 (lower is better) Translates to: CRVSRSAGRCSS*LPYCCSWAILA Trigger: AGCCAATATTGCCCAGGAACAGCAGTACGGCAGCCACGAGGAACACCTCCCGGCTGATCTGGAGACTCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS GCA 72 bp | GAGTCTCCAGATCAGCCGGGAGGTGTTCCTCGTGGCTaGCGTACTGCTGTTCCTGGGCAATATTGGCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: ESPDQPGGVPRG*RTAVPGQYWLC Trigger: ACAAAGCCAATATTGCCCAGGAACAGCAGTACGGCAGCCACGAGGAACACCTCCCGGCTGATCTGGAGACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS CCA 72 bp | CCGTTTCTTCCAGAGCCCGGTGCTGTTTCCAACGCATaGCATAGGGTTTGCTCCGAGCTGCCTTCTTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: PFLPEPGAVSNA*HRVCSELPSCL Trigger: CAGACAAGAAGGCAGCTCGGAGCAAACCCTATGCCATGCGTTGGAAACAGCACCGGGCTCTGGAAGAAACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS GCA 72 bp | CTGTTTCCAACGCATGGCATAGGGTTTGCTCCGAGCTaGCTTCTTGTCTGCCTCGCCATGCTCCATTTTGGC | + |
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Preference number: 6 (lower is better) Translates to: LFPTHGIGFAPS*LLVCLAMLHFG Trigger: GCCAAAATGGAGCATGGCGAGGCAGACAAGAAGGCAGCTCGGAGCAAACCCTATGCCATGCGTTGGAAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS GCA 72 bp | CATGGCATAGGGTTTGCTCCGAGCTGCCTTCTTGTCTaGCTCGCCATGCTCCATTTTGGCAATCTTATGAAT | + |
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Preference number: 6 (lower is better) Translates to: HGIGFAPSCLLV*LAMLHFGNLMN Trigger: ATTCATAAGATTGCCAAAATGGAGCATGGCGAGGCAGACAAGAAGGCAGCTCGGAGCAAACCCTATGCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS CAA 90 bp | CTCGTGGCTGCCGTACTGCTGTTCCTGGGCAATATTGGCTTTGTTTaGCTTGTAGGCAATCTTAGCATTGGACAGCTCAGTGTACTGGAT | + |
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Preference number: 6 (lower is better) Translates to: LVAAVLLFLGNIGFV*LVGNLSIGQLSVLD Trigger: ATCCAGTACACTGAGCTGTCCAATGCTAAGATTGCCTACAAGCAAAACAAAGCCAATATTGCCCAGGAACAGCAGTACGGCAGCCACGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS CCA 72 bp | CTTATGAGGGCAAGGAAGTCTGCTGCACACATAAAATaGGTGGACTTGGAAGCCATACAGGAAATACTGCCC | + |
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Preference number: 6 (lower is better) Translates to: LMRARKSAAHIK*VDLEAIQEILP Trigger: GGGCAGTATTTCCTGTATGGCTTCCAAGTCCACCCATTTTATGTGTGCAGCAGACTTCCTTGCCCTCATAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS CAA 72 bp | GTCTTCCCATCCCCTGATTTGCTACTAATACTGCTTTaGTTGGACCCAGATTTGGACCCCACTTTGGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: VFPSPDLLLILL*LDPDLDPTLAF Trigger: GAAGGCCAAAGTGGGGTCCAAATCTGGGTCCAACAAAAGCAGTATTAGTAGCAAATCAGGGGATGGGAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS GCA 72 bp | ATGAGCCCATCCTCTCGAATTCGTCGTCGGCCATCATaGTTAGGTTTTGGTTGGCTCTGCTCTTTATTTTCT | + |
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Preference number: 6 (lower is better) Translates to: MSPSSRIRRRPS*LGFGWLCSLFS Trigger: AGAAAATAAAGAGCAGAGCCAACCAAAACCTAAGCATGATGGCCGACGACGAATTCGAGAGGATGGGCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS TCA 72 bp | TTGTCTGCCTCGCCATGCTCCATTTTGGCAATCTTATaGATAGCATATCCCAGGTACATCACAGAGGGAGTT | + |
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Preference number: 6 (lower is better) Translates to: LSASPCSILAIL*IAYPRYITEGV Trigger: AACTCCCTCTGTGATGTACCTGGGATATGCTATTCATAAGATTGCCAAAATGGAGCATGGCGAGGCAGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS TCA 72 bp | TGTTATAGCCAGGGGGAGCAGAGGGTGTGTTCCAAGTaGAAGGATAATTATAAGCACCCGGATCATCAAGTT | + |
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Preference number: 6 (lower is better) Translates to: CYSQGEQRVCSK*KDNYKHPDHQV Trigger: AACTTGATGATCCGGGTGCTTATAATTATCCTTTCACTTGGAACACACCCTCTGCTCCCCCTGGCTATAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS CAA 72 bp | CAAGTTCCCTCCTTTTACTGTTTAGTGAGTCTCGAATaGTCCCAAACCCTAAGTGAAGCATCTCCCAAATGT | + |
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Preference number: 6 (lower is better) Translates to: QVPSFYCLVSLE*SQTLSEASPKC Trigger: ACATTTGGGAGATGCTTCACTTAGGGTTTGGGACAATTCGAGACTCACTAAACAGTAAAAGGAGGGAACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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| CDS CCA 72 bp | TGTTGCACACAAATTTGCTTTGTTCATCATAGTAGATaGACTCTCCTCCTACAGCAGTTAGGACAATTCGAA | + |
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Preference number: 6 (lower is better) Translates to: CCTQICFVHHSR*TLLLQQLGQFE Trigger: TTCGAATTGTCCTAACTGCTGTAGGAGGAGAGTCCATCTACTATGATGAACAAAGCAAATTTGTGTGCAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068933.12 ENSMUST00000092567.11 ENSMUST00000107075.9 |
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