Pregenerated sensors for GJB5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042357Ensembl transcript IDs: ENSMUST00000046498.3
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCGGGAGGCACAACTGGATCCCAAAGCTCTGGGAGTCCTCCCTTTTaGTTGCCTCCAATGCCAACTCAGCTCTTCTCCCCATCAGCTACA | + |
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Preference number: 1 (lower is better) Translates to: PGGTTGSQSSGSPPF*LPPMPTQLFSPSAT Trigger: TGTAGCTGATGGGGAGAAGAGCTGAGTTGGCATTGGAGGCAAGCAAAAGGGAGGACTCCCAGAGCTTTGGGATCCAGTTGTGCCTCCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| 3UTR GCA 90 bp | TCGTGCCAGGTACTTGCCATTGCTCACAGTGACCCCCACAGGCAATaGATTAGGAACTCAGCTGAAGTTGTCCGAGTTCTGATGCAGCCA | + |
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Preference number: 1 (lower is better) Translates to: SCQVLAIAHSDPHRQ*IRNSAEVVRVLMQP Trigger: TGGCTGCATCAGAACTCGGACAACTTCAGCTGAGTTCCTAATGCATTGCCTGTGGGGGTCACTGTGAGCAATGGCAAGTACCTGGCACGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| 3UTR CAA 90 bp | GCCGGGAGGCACAACTGGATCCCAAAGCTCTGGGAGTCCTCCCTTTaGCTTGCCTCCAATGCCAACTCAGCTCTTCTCCCCATCAGCTAC | + |
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Preference number: 2 (lower is better) Translates to: AGRHNWIPKLWESSL*LASNANSALLPISY Trigger: GTAGCTGATGGGGAGAAGAGCTGAGTTGGCATTGGAGGCAAGCAAAAGGGAGGACTCCCAGAGCTTTGGGATCCAGTTGTGCCTCCCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| 3UTR-3UTR GCA 90 bp | TCTGCCAAACTCCATCATCTCTGCAGACACCCACAGCCCAGACTTCCAGCTGGGGTCCTCCCTTTTGCTTaGCTCCAATGCCAACTCAGC | + |
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Preference number: 2 (lower is better) Translates to: SAKLHHLCRHPQPRLPAGVLPFA*LQCQLS Trigger: GCTGAGTTGGCATTGGAGGCAAGCAAAAGGGAGGAC...CCCAGCTGGAAGTCTGGGCTGTGGGTGTCTGCAGAGATGATGGAGTTTGGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| 3UTR-3UTR GCA 90 bp | CGGTTCTGCCAAACTCCATCATCTCTGCAGACACCCACAGCCCAGACTTCCAGCGGGAGTCCTCCCTTTTaGTTGCCTCCAATGCCAACT | + |
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Preference number: 2 (lower is better) Translates to: RFCQTPSSLQTPTAQTSSGSPPF*LPPMPT Trigger: AGTTGGCATTGGAGGCAAGCAAAAGGGAGGACTCCC...GCTGGAAGTCTGGGCTGTGGGTGTCTGCAGAGATGATGGAGTTTGGCAGAACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| 3UTR-3UTR CCA 90 bp | GGAAACCCCTTGACTTCAGGAAGGGTACAAAGGCCAAGACCCAAAGGACACCTTGCCGGGAGGCACAACTaGATCCCAAAGCTCTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: GNPLTSGRVQRPRPKGHLAGRHN*IPKLWE Trigger: CTCCCAGAGCTTTGGGATCCAGTTGTGCCTCCCGGC...AAGGTGTCCTTTGGGTCTTGGCCTTTGTACCCTTCCTGAAGTCAAGGGGTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| 3UTR CAA 90 bp | TGGCCTTTTTGGCTGGCTAACTCTGGTCGTGCCAGGTACTTGCCATaGCTCACAGTGACCCCCACAGGCAATGCATTAGGAACTCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: WPFWLANSGRARYLP*LTVTPTGNALGTQL Trigger: CAGCTGAGTTCCTAATGCATTGCCTGTGGGGGTCACTGTGAGCAATGGCAAGTACCTGGCACGACCAGAGTTAGCCAGCCAAAAAGGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| 3UTR CAA 90 bp | CGTACGTGGCCTTTTTGGCTGGCTAACTCTGGTCGTGCCAGGTACTaGCCATTGCTCACAGTGACCCCCACAGGCAATGCATTAGGAACT | + |
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Preference number: 2 (lower is better) Translates to: RTWPFWLANSGRARY*PLLTVTPTGNALGT Trigger: AGTTCCTAATGCATTGCCTGTGGGGGTCACTGTGAGCAATGGCAAGTACCTGGCACGACCAGAGTTAGCCAGCCAAAAAGGCCACGTACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| 3UTR-3UTR GCA 90 bp | TTCCATCCCAACATACGGTTCTGCCAAACTCCATCATCTCTGCAGACACCCACAGAACCTTCCAGGTCATaGCCACCCTGCCAGTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: FHPNIRFCQTPSSLQTPTEPSRS*PPCQSS Trigger: ACTGGACTGGCAGGGTGGGCATGACCTGGAAGGTTC...TGTGGGTGTCTGCAGAGATGATGGAGTTTGGCAGAACCGTATGTTGGGATGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| 3UTR-3UTR CCA 90 bp | CCGGGAGGCACAACTGGATCCCAAAGCTCTGGGAGTCCTCCCTTTTGCTTGCCTATTCATGAGAGATTCTaGAACCTTCCAGGTCATGCC | + |
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Preference number: 2 (lower is better) Translates to: PGGTTGSQSSGSPPFCLPIHERF*NLPGHA Trigger: GGCATGACCTGGAAGGTTCCAGAATCTCTCATGAAT...AGGCAAGCAAAAGGGAGGACTCCCAGAGCTTTGGGATCCAGTTGTGCCTCCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| 3UTR CCA 72 bp | CAGTCAGCCGGGAGGCACAACTGGATCCCAAAGCTCTaGGAGTCCTCCCTTTTGCTTGCCTCCAATGCCAAC | + |
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Preference number: 3 (lower is better) Translates to: QSAGRHNWIPKL*ESSLLLASNAN Trigger: GTTGGCATTGGAGGCAAGCAAAAGGGAGGACTCCCAGAGCTTTGGGATCCAGTTGTGCCTCCCGGCTGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| 3UTR GCA 72 bp | CTGGATCCCAAAGCTCTGGGAGTCCTCCCTTTTGCTTaGCTCCAATGCCAACTCAGCTCTTCTCCCCATCAG | + |
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Preference number: 3 (lower is better) Translates to: LDPKALGVLPFA*LQCQLSSSPHQ Trigger: CTGATGGGGAGAAGAGCTGAGTTGGCATTGGAGGCAAGCAAAAGGGAGGACTCCCAGAGCTTTGGGATCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| 3UTR GCA 72 bp | ATCCCAACATACGGTTCTGCCAAACTCCATCATCTCTaGAGACACCCACAGCCCAGACTTCCAGCTGGGACA | + |
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Preference number: 3 (lower is better) Translates to: IPTYGSAKLHHL*RHPQPRLPAGT Trigger: TGTCCCAGCTGGAAGTCTGGGCTGTGGGTGTCTGCAGAGATGATGGAGTTTGGCAGAACCGTATGTTGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| 3UTR CCA 72 bp | GCTCTTCTCCCCATCAGCTACATTCATGAGAGATTCTaGAACCTTCCAGGTCATGCCCACCCTGCCAGTCCA | + |
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Preference number: 3 (lower is better) Translates to: ALLPISYIHERF*NLPGHAHPASP Trigger: TGGACTGGCAGGGTGGGCATGACCTGGAAGGTTCCAGAATCTCTCATGAATGTAGCTGATGGGGAGAAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| 3UTR GCA 72 bp | CAGAGTCTGGGTGTTTTCCATCCCAACATACGGTTCTaGCAAACTCCATCATCTCTGCAGACACCCACAGCC | + |
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Preference number: 3 (lower is better) Translates to: QSLGVFHPNIRF*QTPSSLQTPTA Trigger: GGCTGTGGGTGTCTGCAGAGATGATGGAGTTTGGCAGAACCGTATGTTGGGATGGAAAACACCCAGACTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| 3UTR GCA 72 bp | AAAGCTCTGGGAGTCCTCCCTTTTGCTTGCCTCCAATaGCAACTCAGCTCTTCTCCCCATCAGCTACATTCA | + |
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Preference number: 3 (lower is better) Translates to: KALGVLPFACLQ*QLSSSPHQLHS Trigger: TGAATGTAGCTGATGGGGAGAAGAGCTGAGTTGGCATTGGAGGCAAGCAAAAGGGAGGACTCCCAGAGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| 3UTR GCA 72 bp | GTACTTGCCATTGCTCACAGTGACCCCCACAGGCAATaGATTAGGAACTCAGCTGAAGTTGTCCGAGTTCTG | + |
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Preference number: 3 (lower is better) Translates to: VLAIAHSDPHRQ*IRNSAEVVRVL Trigger: CAGAACTCGGACAACTTCAGCTGAGTTCCTAATGCATTGCCTGTGGGGGTCACTGTGAGCAATGGCAAGTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| 3UTR TCA 72 bp | AGGAAGGGTACAAAGGCCAAGACCCAAAGGACACCTTaGATCTGTAAACCCATTTATCTTTATTTAGCTCTC | + |
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Preference number: 3 (lower is better) Translates to: RKGTKAKTQRTP*ICKPIYLYLAL Trigger: GAGAGCTAAATAAAGATAAATGGGTTTACAGATTCAAGGTGTCCTTTGGGTCTTGGCCTTTGTACCCTTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS-3UTR GCA 90 bp | CCGGGAGGCACAACTGGATCCCAAAGCTCTGGGAGTCCTCCCTTTTGCTTGCCTGTCCACCCCGCTTCTTaGCGGGATTCGGGTAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: PGGTTGSQSSGSPPFCLPVHPAS*RDSGKG Trigger: ACCTTTACCCGAATCCCGGCAAGAAGCGGGGTGGAC...AGGCAAGCAAAAGGGAGGACTCCCAGAGCTTTGGGATCCAGTTGTGCCTCCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS-3UTR GCA 90 bp | CACAACTGGATCCCAAAGCTCTGGGAGTCCTCCCTTTTGCTTGCCTCCAATGCCGGTGGTCTCCTCAGCTaGGCACACTCAGAACACCGC | + |
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Preference number: 4 (lower is better) Translates to: HNWIPKLWESSLLLASNAGGLLS*AHSEHR Trigger: GCGGTGTTCTGAGTGTGCGCAGCTGAGGAGACCACC...GGCATTGGAGGCAAGCAAAAGGGAGGACTCCCAGAGCTTTGGGATCCAGTTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS-3UTR TCA 90 bp | TCTGCCAAACTCCATCATCTCTGCAGACACCCACAGCCCAGACTTCCAGCTGGGGATAGGCCACATGCATaGCCACAAGCAAAGAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: SAKLHHLCRHPQPRLPAGDRPHA*PQAKRG Trigger: GCCCCTCTTTGCTTGTGGTCATGCATGTGGCCTATC...CCCAGCTGGAAGTCTGGGCTGTGGGTGTCTGCAGAGATGATGGAGTTTGGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS-3UTR CCA 90 bp | CTGCCAAACTCCATCATCTCTGCAGACACCCACAGCCCAGACTTCCAGCTGGGACATCGTAGCAGACATTaGTACAGCCCGGTTGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LPNSIISADTHSPDFQLGHRSRH*YSPVAW Trigger: CCAGGCAACCGGGCTGTACCAATGTCTGCTACGATG...TCCCAGCTGGAAGTCTGGGCTGTGGGTGTCTGCAGAGATGATGGAGTTTGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS-3UTR CCA 90 bp | CAGCCGGGAGGCACAACTGGATCCCAAAGCTCTGGGAGTCCTCCCTTTTGCTTGTACAGCCCGGTTGCCTaGTGTTGCAGTCAAAATCCT | + |
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Preference number: 4 (lower is better) Translates to: QPGGTTGSQSSGSPPFCLYSPVA*CCSQNP Trigger: AGGATTTTGACTGCAACACCAGGCAACCGGGCTGTA...CAAGCAAAAGGGAGGACTCCCAGAGCTTTGGGATCCAGTTGTGCCTCCCGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS-3UTR CCA 90 bp | CACAACTGGATCCCAAAGCTCTGGGAGTCCTCCCTTTTGCTTGCCTCCAATGCCATGGTTTTCTTCACGTaGGCTCGAGGGCGGTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: HNWIPKLWESSLLLASNAMVFFT*ARGRSG Trigger: ACCAGACCGCCCTCGAGCCCACGTGAAGAAAACCAT...GGCATTGGAGGCAAGCAAAAGGGAGGACTCCCAGAGCTTTGGGATCCAGTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| 3UTR CAA 72 bp | TGGCTGGCTAACTCTGGTCGTGCCAGGTACTTGCCATaGCTCACAGTGACCCCCACAGGCAATGCATTAGGA | + |
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Preference number: 4 (lower is better) Translates to: WLANSGRARYLP*LTVTPTGNALG Trigger: TCCTAATGCATTGCCTGTGGGGGTCACTGTGAGCAATGGCAAGTACCTGGCACGACCAGAGTTAGCCAGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| 3UTR CAA 72 bp | CCTTTTTGGCTGGCTAACTCTGGTCGTGCCAGGTACTaGCCATTGCTCACAGTGACCCCCACAGGCAATGCA | + |
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Preference number: 4 (lower is better) Translates to: PFWLANSGRARY*PLLTVTPTGNA Trigger: TGCATTGCCTGTGGGGGTCACTGTGAGCAATGGCAAGTACCTGGCACGACCAGAGTTAGCCAGCCAAAAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| 3UTR CAA 72 bp | ACTGGATCCCAAAGCTCTGGGAGTCCTCCCTTTTGCTaGCCTCCAATGCCAACTCAGCTCTTCTCCCCATCA | + |
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Preference number: 4 (lower is better) Translates to: TGSQSSGSPPFC*PPMPTQLFSPS Trigger: TGATGGGGAGAAGAGCTGAGTTGGCATTGGAGGCAAGCAAAAGGGAGGACTCCCAGAGCTTTGGGATCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS-3UTR CCA 90 bp | AGTCAGCCGGGAGGCACAACTGGATCCCAAAGCTCTGGGAGTCCTCCCTTTTGCAAGGGAGGGTATATCTaGGATAGAATGCGTGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: SQPGGTTGSQSSGSPPFCKGGYI*DRMRGR Trigger: TCTTCCACGCATTCTATCCCAGATATACCCTCCCTT...GCAAAAGGGAGGACTCCCAGAGCTTTGGGATCCAGTTGTGCCTCCCGGCTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS-3UTR GCA 90 bp | TTCCATCCCAACATACGGTTCTGCCAAACTCCATCATCTCTGCAGACACCCACACCAGAGACAGCCAGATaGGACCAAAGGCTGTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: FHPNIRFCQTPSSLQTPTPETAR*DQRLWS Trigger: ACTCCACAGCCTTTGGTCGCATCTGGCTGTCTCTGG...TGTGGGTGTCTGCAGAGATGATGGAGTTTGGCAGAACCGTATGTTGGGATGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS-3UTR GCA 90 bp | GGAGAGGGAAACCCCTTGACTTCAGGAAGGGTACAAAGGCCAAGACCCAAAGGACCGGTTGCCTGGTGTTaGAGTCAAAATCCTTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: GEGNPLTSGRVQRPRPKGPVAWC*SQNPSG Trigger: ACCAGAAGGATTTTGACTGCAACACCAGGCAACCGG...TCCTTTGGGTCTTGGCCTTTGTACCCTTCCTGAAGTCAAGGGGTTTCCCTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS-3UTR CCA 90 bp | CTTGCCTCCAATGCCAACTCAGCTCTTCTCCCCATCAGCTACATTCATGAGAGATCTTTGCATGTGCAGTaGGTGGTCTCCTCAGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: LASNANSALLPISYIHERSLHVQ*VVSSAA Trigger: CGCAGCTGAGGAGACCACCCACTGCACATGCAAAGA...TCTCTCATGAATGTAGCTGATGGGGAGAAGAGCTGAGTTGGCATTGGAGGCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS-3UTR GCA 90 bp | CCATCAGCTACATTCATGAGAGATTCTGGAACCTTCCAGGTCATGCCCACCCTGGTCATTCTTTGCATGTaGAGTGGGTGGTCTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: PSATFMRDSGTFQVMPTLVILCM*SGWSPQ Trigger: CTGAGGAGACCACCCACTGCACATGCAAAGAATGAC...CAGGGTGGGCATGACCTGGAAGGTTCCAGAATCTCTCATGAATGTAGCTGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS-3UTR GCA 90 bp | CTGCAGACACCCACAGCCCAGACTTCCAGCTGGGACAAAAGGTTAGCTTTGGAAGTTTGGGTCATTCTTTaGATGTGCAGTGGGTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: LQTPTAQTSSWDKRLALEVWVIL*MCSGWS Trigger: AGACCACCCACTGCACATGCAAAGAATGACCCAAAC...TTCCAAAGCTAACCTTTTGTCCCAGCTGGAAGTCTGGGCTGTGGGTGTCTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS-3UTR TCA 90 bp | CTTTGGAACAGCCCTGAGGAAAAGTTAGATACTCCTTTTCTAGAGGAGAGGGAACGGAGGGCTTGGCAATaGAGCAGTCCACTGTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: LWNSPEEKLDTPFLEERERRAWQ*SSPLCW Trigger: CCAACACAGTGGACTGCTTCATTGCCAAGCCCTCCG...TTCCCTCTCCTCTAGAAAAGGAGTATCTAACTTTTCCTCAGGGCTGTTCCAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS-3UTR TCA 90 bp | CCATCAGCTACATTCATGAGAGATTCTGGAACCTTCCAGGTCATGCCCACCCTGAAAGATGAGGTCGCATaGGAGGAAGTCCTTCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: PSATFMRDSGTFQVMPTLKDEVA*EEVLLF Trigger: AAAGAGAAGGACTTCCTCTCATGCGACCTCATCTTT...CAGGGTGGGCATGACCTGGAAGGTTCCAGAATCTCTCATGAATGTAGCTGATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS-3UTR GCA 90 bp | ACTGGATCCCAAAGCTCTGGGAGTCCTCCCTTTTGCTTGCCTCCAATGCCAACTATATCTGGGATAGAATaGGTGGAAGAGGTAGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: TGSQSSGSPPFCLPPMPTISGIE*VEEVEE Trigger: TTCCTCTACCTCTTCCACGCATTCTATCCCAGATAT...AGTTGGCATTGGAGGCAAGCAAAAGGGAGGACTCCCAGAGCTTTGGGATCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS-3UTR CCA 90 bp | CTTTGGAACAGCCCTGAGGAAAAGTTAGATACTCCTTTTCTAGAGGAGAGGGAACAGTCAAAATCCTTCTaGTCGTCTCCCCACACGCGC | + |
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Preference number: 4 (lower is better) Translates to: LWNSPEEKLDTPFLEEREQSKSF*SSPHTR Trigger: GCGCGTGTGGGGAGACGACCAGAAGGATTTTGACTG...TTCCCTCTCCTCTAGAAAAGGAGTATCTAACTTTTCCTCAGGGCTGTTCCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS-3UTR CCA 90 bp | TCAGCTCTTCTCCCCATCAGCTACATTCATGAGAGATTCTGGAACCTTCCAGGTAGAGTTGGCCCAGTTTaGGTCATTCTTTGCATGTGC | + |
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Preference number: 4 (lower is better) Translates to: SALLPISYIHERFWNLPGRVGPV*VILCMC Trigger: GCACATGCAAAGAATGACCCAAACTGGGCCAACTCT...ACCTGGAAGGTTCCAGAATCTCTCATGAATGTAGCTGATGGGGAGAAGAGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS-3UTR GCA 90 bp | GTACAAAGGCCAAGACCCAAAGGACACCTTGAATCTGTAAACCCATTTATCTTTTTGGTACAGCCCGGTTaGCTGGTGTTGCAGTCAAAA | + |
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Preference number: 4 (lower is better) Translates to: VQRPRPKGHLESVNPFIFLVQPG*LVLQSK Trigger: TTTTGACTGCAACACCAGGCAACCGGGCTGTACCAA...AAAGATAAATGGGTTTACAGATTCAAGGTGTCCTTTGGGTCTTGGCCTTTGTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS TCA 90 bp | GTTTTCTTCACGTGGGCTCGAGGGCGGTCTGGTAACAGAGGCGGGTaGGCGTCCGAGCCCAGAAAGATGAGGTCGCATGAGAGGAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: VFFTWARGRSGNRGG*ASEPRKMRSHERKS Trigger: GGACTTCCTCTCATGCGACCTCATCTTTCTGGGCTCGGACGCTCACCCGCCTCTGTTACCAGACCGCCCTCGAGCCCACGTGAAGAAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS-3UTR CAA 90 bp | AGTCAGCCGGGAGGCACAACTGGATCCCAAAGCTCTGGGAGTCCTCCCTTTTGCGGCTCCGCATGGCACTaGACCATAGAAGGGAGGGTA | + |
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Preference number: 5 (lower is better) Translates to: SQPGGTTGSQSSGSPPFCGSAWH*TIEGRV Trigger: TACCCTCCCTTCTATGGTCAAGTGCCATGCGGAGCC...GCAAAAGGGAGGACTCCCAGAGCTTTGGGATCCAGTTGTGCCTCCCGGCTGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS-3UTR CAA 90 bp | AGTCAGCCGGGAGGCACAACTGGATCCCAAAGCTCTGGGAGTCCTCCCTTTTGCCCCGGTTGCCTGGTGTaGCAGTCAAAATCCTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: SQPGGTTGSQSSGSPPFCPGCLV*QSKSFW Trigger: CCAGAAGGATTTTGACTGCAACACCAGGCAACCGGG...GCAAAAGGGAGGACTCCCAGAGCTTTGGGATCCAGTTGTGCCTCCCGGCTGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS-3UTR CAA 90 bp | CAGCCGGGAGGCACAACTGGATCCCAAAGCTCTGGGAGTCCTCCCTTTTGCTTGATGTCTATGGTGGCCTaGAACGAGAGGCTGAAGACG | + |
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Preference number: 5 (lower is better) Translates to: QPGGTTGSQSSGSPPFCLMSMVA*NERLKT Trigger: CGTCTTCAGCCTCTCGTTCAAGGCCACCATAGACAT...CAAGCAAAAGGGAGGACTCCCAGAGCTTTGGGATCCAGTTGTGCCTCCCGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS-3UTR CAA 90 bp | ACTGGATCCCAAAGCTCTGGGAGTCCTCCCTTTTGCTTGCCTCCAATGCCAACTAAGCAGTCCACTGTGTaGGGACACGGCTCCGCATGG | + |
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Preference number: 5 (lower is better) Translates to: TGSQSSGSPPFCLPPMPTKQSTV*GHGSAW Trigger: CCATGCGGAGCCGTGTCCCAACACAGTGGACTGCTT...AGTTGGCATTGGAGGCAAGCAAAAGGGAGGACTCCCAGAGCTTTGGGATCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS-3UTR CAA 90 bp | CTGCCAAACTCCATCATCTCTGCAGACACCCACAGCCCAGACTTCCAGCTGGGATTTTTCTCGGAGGGCTaGGCAATGAAGCAGTCCACT | + |
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Preference number: 5 (lower is better) Translates to: LPNSIISADTHSPDFQLGFFSEG*AMKQST Trigger: AGTGGACTGCTTCATTGCCAAGCCCTCCGAGAAAAA...TCCCAGCTGGAAGTCTGGGCTGTGGGTGTCTGCAGAGATGATGGAGTTTGGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS GCA 90 bp | GTCCTTCTCTTTGCTAGGAGAGTTGGCCCAGTTTGGGTCATTCTTTaGATGTGCAGTGGGTGGTCTCCTCAGCTGCGCACACTCAGAACA | + |
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Preference number: 5 (lower is better) Translates to: VLLFARRVGPVWVIL*MCSGWSPQLRTLRT Trigger: TGTTCTGAGTGTGCGCAGCTGAGGAGACCACCCACTGCACATGCAAAGAATGACCCAAACTGGGCCAACTCTCCTAGCAAAGAGAAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS-3UTR CAA 90 bp | TTCCATCCCAACATACGGTTCTGCCAAACTCCATCATCTCTGCAGACACCCACAAGTTTGGGTCATTCTTaGCATGTGCAGTGGGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: FHPNIRFCQTPSSLQTPTSLGHS*HVQWVV Trigger: GACCACCCACTGCACATGCAAAGAATGACCCAAACT...TGTGGGTGTCTGCAGAGATGATGGAGTTTGGCAGAACCGTATGTTGGGATGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS-3UTR CAA 90 bp | TTTCCATCCCAACATACGGTTCTGCCAAACTCCATCATCTCTGCAGACACCCACGAGAGTTGGCCCAGTTaGGGTCATTCTTTGCATGTG | + |
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Preference number: 5 (lower is better) Translates to: FPSQHTVLPNSIISADTHESWPS*GHSLHV Trigger: CACATGCAAAGAATGACCCAAACTGGGCCAACTCTC...GTGGGTGTCTGCAGAGATGATGGAGTTTGGCAGAACCGTATGTTGGGATGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS-3UTR CAA 90 bp | TTCCATCCCAACATACGGTTCTGCCAAACTCCATCATCTCTGCAGACACCCACATCTTTGCTAGGAGAGTaGGCCCAGTTTGGGTCATTC | + |
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Preference number: 5 (lower is better) Translates to: FHPNIRFCQTPSSLQTPTSLLGE*AQFGSF Trigger: GAATGACCCAAACTGGGCCAACTCTCCTAGCAAAGA...TGTGGGTGTCTGCAGAGATGATGGAGTTTGGCAGAACCGTATGTTGGGATGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS-3UTR CAA 90 bp | GTTAGATACTCCTTTTCTAGAGGAGAGGGAAACCCCTTGACTTCAGGAAGGGTAATTGGTACAGCCCGGTaGCCTGGTGTTGCAGTCAAA | + |
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Preference number: 5 (lower is better) Translates to: VRYSFSRGEGNPLTSGRVIGTAR*PGVAVK Trigger: TTTGACTGCAACACCAGGCAACCGGGCTGTACCAAT...TACCCTTCCTGAAGTCAAGGGGTTTCCCTCTCCTCTAGAAAAGGAGTATCTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS GCA 72 bp | CGTAGCAGACATTGGTACAGCCCGGTTGCCTGGTGTTaGAGTCAAAATCCTTCTGGTCGTCTCCCCACACGC | + |
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Preference number: 6 (lower is better) Translates to: RSRHWYSPVAWC*SQNPSGRLPTR Trigger: GCGTGTGGGGAGACGACCAGAAGGATTTTGACTGCAACACCAGGCAACCGGGCTGTACCAATGTCTGCTACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS CCA 72 bp | GGCCCAGTTTGGGTCATTCTTTGCATGTGCAGTGGGTaGTCTCCTCAGCTGCGCACACTCAGAACACCGCTT | + |
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Preference number: 6 (lower is better) Translates to: GPVWVILCMCSG*SPQLRTLRTPL Trigger: AAGCGGTGTTCTGAGTGTGCGCAGCTGAGGAGACCACCCACTGCACATGCAAAGAATGACCCAAACTGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS GCA 72 bp | AGGAGAGTTGGCCCAGTTTGGGTCATTCTTTGCATGTaGAGTGGGTGGTCTCCTCAGCTGCGCACACTCAGA | + |
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Preference number: 6 (lower is better) Translates to: RRVGPVWVILCM*SGWSPQLRTLR Trigger: TCTGAGTGTGCGCAGCTGAGGAGACCACCCACTGCACATGCAAAGAATGACCCAAACTGGGCCAACTCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS CCA 72 bp | AGTTGGCCCAGTTTGGGTCATTCTTTGCATGTGCAGTaGGTGGTCTCCTCAGCTGCGCACACTCAGAACACC | + |
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Preference number: 6 (lower is better) Translates to: SWPSLGHSLHVQ*VVSSAAHTQNT Trigger: GGTGTTCTGAGTGTGCGCAGCTGAGGAGACCACCCACTGCACATGCAAAGAATGACCCAAACTGGGCCAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS GCA 72 bp | TTTGCTAGGAGAGTTGGCCCAGTTTGGGTCATTCTTTaGATGTGCAGTGGGTGGTCTCCTCAGCTGCGCACA | + |
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Preference number: 6 (lower is better) Translates to: FARRVGPVWVIL*MCSGWSPQLRT Trigger: TGTGCGCAGCTGAGGAGACCACCCACTGCACATGCAAAGAATGACCCAAACTGGGCCAACTCTCCTAGCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS CCA 72 bp | ACTCATCGTAGCAGACATTGGTACAGCCCGGTTGCCTaGTGTTGCAGTCAAAATCCTTCTGGTCGTCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: THRSRHWYSPVA*CCSQNPSGRLP Trigger: GGGGAGACGACCAGAAGGATTTTGACTGCAACACCAGGCAACCGGGCTGTACCAATGTCTGCTACGATGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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| CDS CAA 90 bp | TCCGAGCCCAGAAAGATGAGGTCGCATGAGAGGAAGTCCTTCTCTTaGCTAGGAGAGTTGGCCCAGTTTGGGTCATTCTTTGCATGTGCA | + |
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Preference number: 6 (lower is better) Translates to: SEPRKMRSHERKSFS*LGELAQFGSFFACA Trigger: TGCACATGCAAAGAATGACCCAAACTGGGCCAACTCTCCTAGCAAAGAGAAGGACTTCCTCTCATGCGACCTCATCTTTCTGGGCTCGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046498.3 |
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