Pregenerated sensors for GJB4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046623Ensembl transcript IDs: ENSMUST00000060419.2, ENSMUST00000106090.8
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGATGAACTTCTGGAGTCCCCACAGCCATGTTTCCCACCTGACCTaGTGCAGAAGACCACACTCCCTTCGCCCATTTTCCTGGGTGGCT | + |
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Preference number: 1 (lower is better) Translates to: WMNFWSPHSHVSHLT*CRRPHSLRPFSWVA Trigger: AGCCACCCAGGAAAATGGGCGAAGGGAGTGTGGTCTTCTGCAGCAGGTCAGGTGGGAAACATGGCTGTGGGGACTCCAGAAGTTCATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| 3UTR GCA 90 bp | ATGAACTTCTGGAGTCCCCACAGCCATGTTTCCCACCTGACCTGCTaGAGAAGACCACACTCCCTTCGCCCATTTTCCTGGGTGGCTTCA | + |
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Preference number: 1 (lower is better) Translates to: MNFWSPHSHVSHLTC*RRPHSLRPFSWVAS Trigger: TGAAGCCACCCAGGAAAATGGGCGAAGGGAGTGTGGTCTTCTGCAGCAGGTCAGGTGGGAAACATGGCTGTGGGGACTCCAGAAGTTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| 3UTR CCA 90 bp | ACTCAAGGGTGCTTCCCATCTTCCGCTAGCTCTTGGATGAACTTCTaGAGTCCCCACAGCCATGTTTCCCACCTGACCTGCTGCAGAAGA | + |
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Preference number: 1 (lower is better) Translates to: TQGCFPSSASSWMNF*SPHSHVSHLTCCRR Trigger: TCTTCTGCAGCAGGTCAGGTGGGAAACATGGCTGTGGGGACTCCAGAAGTTCATCCAAGAGCTAGCGGAAGATGGGAAGCACCCTTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| 3UTR-3UTR TCA 90 bp | ATCCCCACCAGCCATCAAGTCCCTGGAGGCTCAAGTTCTAGGGACTCAAGGGTGGCCATGTTTCCCACCTaGCCTGCTGCAGAAGACCAC | + |
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Preference number: 2 (lower is better) Translates to: IPTSHQVPGGSSSRDSRVAMFPT*PAAEDH Trigger: GTGGTCTTCTGCAGCAGGTCAGGTGGGAAACATGGC...CACCCTTGAGTCCCTAGAACTTGAGCCTCCAGGGACTTGATGGCTGGTGGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| 3UTR-3UTR GCA 90 bp | GGGTGCTTCCCATCTTCCGCTAGCTCTTGGATGAACTTCTGGAGTCCCCACAGCGTTTCCCACCTGACCTaGTGCAGAAGACCACACTCC | + |
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Preference number: 2 (lower is better) Translates to: GCFPSSASSWMNFWSPHSVSHLT*CRRPHS Trigger: GGAGTGTGGTCTTCTGCAGCAGGTCAGGTGGGAAAC...GCTGTGGGGACTCCAGAAGTTCATCCAAGAGCTAGCGGAAGATGGGAAGCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGTCCCCACAGCCATGTTTCCCACCTGACCTGCTGCAGAAGACCACACTCGCCCATTTTCCTGGGTaGCTTCAGTGGACAGACAGT | + |
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Preference number: 2 (lower is better) Translates to: LESPQPCFPPDLLQKTTLAHFPG*LQWTDS Trigger: ACTGTCTGTCCACTGAAGCCACCCAGGAAAATGGGC...GAGTGTGGTCTTCTGCAGCAGGTCAGGTGGGAAACATGGCTGTGGGGACTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTTCCCATCTTCCGCTAGCTCTTGGATGAACTTCTGGAGTCCCCACAGCCATCCTGGGTGGCTTCAGTaGACAGACAGTCACCTCATA | + |
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Preference number: 2 (lower is better) Translates to: CFPSSASSWMNFWSPHSHPGWLQ*TDSHLI Trigger: TATGAGGTGACTGTCTGTCCACTGAAGCCACCCAGG...ATGGCTGTGGGGACTCCAGAAGTTCATCCAAGAGCTAGCGGAAGATGGGAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| 3UTR-3UTR GCA 90 bp | TTATTAATGGAGTTGAGGTCCTCATTGACAAATATAACATCCCCACCAGCCATCTCCCACCTGACCTGCTaGAGAAGACCACACTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: LLMELRSSLTNITSPPAISHLTC*RRPHSL Trigger: AAGGGAGTGTGGTCTTCTGCAGCAGGTCAGGTGGGA...GATGGCTGGTGGGGATGTTATATTTGTCAATGAGGACCTCAACTCCATTAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| 3UTR-3UTR GCA 90 bp | TTTATTAATGGAGTTGAGGTCCTCATTGACAAATATAACATCCCCACCAGCCATGTTTCCCACCTGACCTaGTGCAGAAGACCACACTCC | + |
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Preference number: 2 (lower is better) Translates to: FINGVEVLIDKYNIPTSHVSHLT*CRRPHS Trigger: GGAGTGTGGTCTTCTGCAGCAGGTCAGGTGGGAAAC...ATGGCTGGTGGGGATGTTATATTTGTCAATGAGGACCTCAACTCCATTAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| 3UTR-3UTR CCA 90 bp | TTATTAATGGAGTTGAGGTCCTCATTGACAAATATAACATCCCCACCAGCCATCCTTCGCCCATTTTCCTaGGTGGCTTCAGTGGACAGA | + |
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Preference number: 2 (lower is better) Translates to: LLMELRSSLTNITSPPAILRPFS*VASVDR Trigger: TCTGTCCACTGAAGCCACCCAGGAAAATGGGCGAAG...GATGGCTGGTGGGGATGTTATATTTGTCAATGAGGACCTCAACTCCATTAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| 3UTR-3UTR CCA 90 bp | TTATTAATGGAGTTGAGGTCCTCATTGACAAATATAACATCCCCACCAGCCATCTCTTCCGCTAGCTCTTaGATGAACTTCTGGAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: LLMELRSSLTNITSPPAISSASS*MNFWSP Trigger: GGGACTCCAGAAGTTCATCCAAGAGCTAGCGGAAGA...GATGGCTGGTGGGGATGTTATATTTGTCAATGAGGACCTCAACTCCATTAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| 3UTR-3UTR CCA 90 bp | TTTATTAATGGAGTTGAGGTCCTCATTGACAAATATAACATCCCCACCAGCCATTCTTGGATGAACTTCTaGAGTCCCCACAGCCATGTT | + |
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Preference number: 2 (lower is better) Translates to: FINGVEVLIDKYNIPTSHSWMNF*SPHSHV Trigger: AACATGGCTGTGGGGACTCCAGAAGTTCATCCAAGA...ATGGCTGGTGGGGATGTTATATTTGTCAATGAGGACCTCAACTCCATTAATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| 3UTR GCA 72 bp | TGGAGTCCCCACAGCCATGTTTCCCACCTGACCTGCTaGAGAAGACCACACTCCCTTCGCCCATTTTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: WSPHSHVSHLTC*RRPHSLRPFSW Trigger: CCAGGAAAATGGGCGAAGGGAGTGTGGTCTTCTGCAGCAGGTCAGGTGGGAAACATGGCTGTGGGGACTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| 3UTR GCA 72 bp | TTCTGGAGTCCCCACAGCCATGTTTCCCACCTGACCTaGTGCAGAAGACCACACTCCCTTCGCCCATTTTCC | + |
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Preference number: 3 (lower is better) Translates to: FWSPHSHVSHLT*CRRPHSLRPFS Trigger: GGAAAATGGGCGAAGGGAGTGTGGTCTTCTGCAGCAGGTCAGGTGGGAAACATGGCTGTGGGGACTCCAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| 3UTR CCA 72 bp | TGCTTCCCATCTTCCGCTAGCTCTTGGATGAACTTCTaGAGTCCCCACAGCCATGTTTCCCACCTGACCTGC | + |
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Preference number: 3 (lower is better) Translates to: CFPSSASSWMNF*SPHSHVSHLTC Trigger: GCAGGTCAGGTGGGAAACATGGCTGTGGGGACTCCAGAAGTTCATCCAAGAGCTAGCGGAAGATGGGAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| 3UTR CCA 72 bp | GGGACTCAAGGGTGCTTCCCATCTTCCGCTAGCTCTTaGATGAACTTCTGGAGTCCCCACAGCCATGTTTCC | + |
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Preference number: 3 (lower is better) Translates to: GTQGCFPSSASS*MNFWSPHSHVS Trigger: GGAAACATGGCTGTGGGGACTCCAGAAGTTCATCCAAGAGCTAGCGGAAGATGGGAAGCACCCTTGAGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| 3UTR CCA 72 bp | GCAGAAGACCACACTCCCTTCGCCCATTTTCCTGGGTaGCTTCAGTGGACAGACAGTCACCTCATAACCATA | + |
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Preference number: 3 (lower is better) Translates to: AEDHTPFAHFPG*LQWTDSHLITI Trigger: TATGGTTATGAGGTGACTGTCTGTCCACTGAAGCCACCCAGGAAAATGGGCGAAGGGAGTGTGGTCTTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR GCA 90 bp | TCCCCACAGCCATGTTTCCCACCTGACCTGCTGCAGAAGACCACACTCCCTTCGCCACAGACAGCCAGATaGGGCCCAGTGCCGTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: SPQPCFPPDLLQKTTLPSPQTAR*GPVPWS Trigger: ACTCCACGGCACTGGGCCGCATCTGGCTGTCTGTGG...CGAAGGGAGTGTGGTCTTCTGCAGCAGGTCAGGTGGGAAACATGGCTGTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR GCA 90 bp | ATCCCCACCAGCCATCAAGTCCCTGGAGGCTCAAGTTCTAGGGACTCAAGGGTGCCACAGACAGCCAGATaGGGCCCAGTGCCGTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: IPTSHQVPGGSSSRDSRVPQTAR*GPVPWS Trigger: ACTCCACGGCACTGGGCCGCATCTGGCTGTCTGTGG...CACCCTTGAGTCCCTAGAACTTGAGCCTCCAGGGACTTGATGGCTGGTGGGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR CCA 90 bp | AGACCACACTCCCTTCGCCCATTTTCCTGGGTGGCTTCAGTGGACAGACAGTCAGCAGTTGGTGCCTCCTaGAAGCTTTCCGGCGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: RPHSLRPFSWVASVDRQSAVGAS*KLSGAG Trigger: CCCGGCGCCGGAAAGCTTCCAGGAGGCACCAACTGC...TGACTGTCTGTCCACTGAAGCCACCCAGGAAAATGGGCGAAGGGAGTGTGGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR GCA 90 bp | CCTGCTGCAGAAGACCACACTCCCTTCGCCCATTTTCCTGGGTGGCTTCAGTGGGGCCACCCCTCTTCTTaGTCAGGTTGCTGTACAGGG | + |
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Preference number: 4 (lower is better) Translates to: PAAEDHTPFAHFPGWLQWGHPSS*SGCCTG Trigger: CCCTGTACAGCAACCTGAGCAAGAAGAGGGGTGGCC...CCACTGAAGCCACCCAGGAAAATGGGCGAAGGGAGTGTGGTCTTCTGCAGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR GCA 90 bp | CTGGAGTCCCCACAGCCATGTTTCCCACCTGACCTGCTGCAGAAGACCACACTCGTATCTGGCAGTTGGTaGCTCCTGGAAGCTTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: LESPQPCFPPDLLQKTTLVSGSW*LLEAFR Trigger: CCGGAAAGCTTCCAGGAGGCACCAACTGCCAGATAC...GAGTGTGGTCTTCTGCAGCAGGTCAGGTGGGAAACATGGCTGTGGGGACTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR CCA 90 bp | TCCCCACAGCCATGTTTCCCACCTGACCTGCTGCAGAAGACCACACTCCCTTCGGACGTTGGGGCAGCCTaGCTGCTTGGTATTGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: SPQPCFPPDLLQKTTLPSDVGAA*LLGIAD Trigger: ATCTGCAATACCAAGCAGCCAGGCTGCCCCAACGTC...CGAAGGGAGTGTGGTCTTCTGCAGCAGGTCAGGTGGGAAACATGGCTGTGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR GCA 90 bp | TGCAGAAGACCACACTCCCTTCGCCCATTTTCCTGGGTGGCTTCAGTGGACAGACCAGATGCGGCCCAGTaGCGTGGAGTACTTGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: CRRPHSLRPFSWVASVDRPDAAQ*RGVLVH Trigger: GTGAACAAGTACTCCACGGCACTGGGCCGCATCTGG...TCTGTCCACTGAAGCCACCCAGGAAAATGGGCGAAGGGAGTGTGGTCTTCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR GCA 90 bp | CCATGTTTCCCACCTGACCTGCTGCAGAAGACCACACTCCCTTCGCCCATTTTCCCAGATGCGGCCCAGTaGCGTGGAGTACTTGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: PCFPPDLLQKTTLPSPIFPDAAQ*RGVLVH Trigger: GTGAACAAGTACTCCACGGCACTGGGCCGCATCTGG...GAAAATGGGCGAAGGGAGTGTGGTCTTCTGCAGCAGGTCAGGTGGGAAACATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR GCA 90 bp | CTGGAGTCCCCACAGCCATGTTTCCCACCTGACCTGCTGCAGAAGACCACACTCTCTTCTTGCTCAGGTTaGTGTACAGGGCTGGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: LESPQPCFPPDLLQKTTLSSCSG*CTGLGH Trigger: ATGCCCCAGCCCTGTACAGCAACCTGAGCAAGAAGA...GAGTGTGGTCTTCTGCAGCAGGTCAGGTGGGAAACATGGCTGTGGGGACTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR GCA 90 bp | CATGTTTCCCACCTGACCTGCTGCAGAAGACCACACTCCCTTCGCCCATTTTCCGGCCACCCCTCTTCTTaGTCAGGTTGCTGTACAGGG | + |
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Preference number: 4 (lower is better) Translates to: HVSHLTCCRRPHSLRPFSGHPSS*SGCCTG Trigger: CCCTGTACAGCAACCTGAGCAAGAAGAGGGGTGGCC...GGAAAATGGGCGAAGGGAGTGTGGTCTTCTGCAGCAGGTCAGGTGGGAAACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR GCA 90 bp | ATCCCCACCAGCCATCAAGTCCCTGGAGGCTCAAGTTCTAGGGACTCAAGGGTGCCTCCATGCATCTCTTaGCCACCAGGTAGACGACCT | + |
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Preference number: 4 (lower is better) Translates to: IPTSHQVPGGSSSRDSRVPPCIS*PPGRRP Trigger: AGGTCGTCTACCTGGTGGGCAAGAGATGCATGGAGG...CACCCTTGAGTCCCTAGAACTTGAGCCTCCAGGGACTTGATGGCTGGTGGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR GCA 90 bp | ATCCCCACCAGCCATCAAGTCCCTGGAGGCTCAAGTTCTAGGGACTCAAGGGTGGACGGAAGACCTCCATaGATCTCTTGCCCACCAGGT | + |
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Preference number: 4 (lower is better) Translates to: IPTSHQVPGGSSSRDSRVDGRPP*ISCPPG Trigger: ACCTGGTGGGCAAGAGATGCATGGAGGTCTTCCGTC...CACCCTTGAGTCCCTAGAACTTGAGCCTCCAGGGACTTGATGGCTGGTGGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR CCA 90 bp | GACCACACTCCCTTCGCCCATTTTCCTGGGTGGCTTCAGTGGACAGACAGTCACGTTGCTGTACAGGGCTaGGGCATTGGGCCCATGTTT | + |
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Preference number: 4 (lower is better) Translates to: DHTPFAHFPGWLQWTDSHVAVQG*GIGPMF Trigger: AAACATGGGCCCAATGCCCCAGCCCTGTACAGCAAC...GTGACTGTCTGTCCACTGAAGCCACCCAGGAAAATGGGCGAAGGGAGTGTGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR TCA 90 bp | TCCCCACAGCCATGTTTCCCACCTGACCTGCTGCAGAAGACCACACTCCCTTCGCATTGGGCCCATGTTTaGGGCGATGTTTCCTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SPQPCFPPDLLQKTTLPSHWAHV*GDVSFL Trigger: GAGAAAGGAAACATCGCCTCAAACATGGGCCCAATG...CGAAGGGAGTGTGGTCTTCTGCAGCAGGTCAGGTGGGAAACATGGCTGTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR GCA 90 bp | GGGTGCTTCCCATCTTCCGCTAGCTCTTGGATGAACTTCTGGAGTCCCCACAGCTCTTCTTGCTCAGGTTaGTGTACAGGGCTGGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: GCFPSSASSWMNFWSPHSSSCSG*CTGLGH Trigger: ATGCCCCAGCCCTGTACAGCAACCTGAGCAAGAAGA...GCTGTGGGGACTCCAGAAGTTCATCCAAGAGCTAGCGGAAGATGGGAAGCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR TCA 90 bp | GACCACACTCCCTTCGCCCATTTTCCTGGGTGGCTTCAGTGGACAGACAGTCACCATTGGGCCCATGTTTaGGGCGATGTTTCCTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: DHTPFAHFPGWLQWTDSHHWAHV*GDVSFL Trigger: GAGAAAGGAAACATCGCCTCAAACATGGGCCCAATG...GTGACTGTCTGTCCACTGAAGCCACCCAGGAAAATGGGCGAAGGGAGTGTGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR CCA 90 bp | TGCTTCCCATCTTCCGCTAGCTCTTGGATGAACTTCTGGAGTCCCCACAGCCATGACGTTGGGGCAGCCTaGCTGCTTGGTATTGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: CFPSSASSWMNFWSPHSHDVGAA*LLGIAD Trigger: ATCTGCAATACCAAGCAGCCAGGCTGCCCCAACGTC...ATGGCTGTGGGGACTCCAGAAGTTCATCCAAGAGCTAGCGGAAGATGGGAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR TCA 90 bp | GAGTCCCCACAGCCATGTTTCCCACCTGACCTGCTGCAGAAGACCACACTCCCTGCTTGGTATTGCAGATaGAATCCTTTTGATCGTCGT | + |
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Preference number: 4 (lower is better) Translates to: ESPQPCFPPDLLQKTTLPAWYCR*NPFDRR Trigger: ACGACGATCAAAAGGATTTCATCTGCAATACCAAGC...AGGGAGTGTGGTCTTCTGCAGCAGGTCAGGTGGGAAACATGGCTGTGGGGACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR GCA 90 bp | TGCTTCCCATCTTCCGCTAGCTCTTGGATGAACTTCTGGAGTCCCCACAGCCATTTGGGGCAGCCTGGCTaGTTGGTATTGCAGATGAAA | + |
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Preference number: 4 (lower is better) Translates to: CFPSSASSWMNFWSPHSHLGQPG*LVLQMK Trigger: TTTCATCTGCAATACCAAGCAGCCAGGCTGCCCCAA...ATGGCTGTGGGGACTCCAGAAGTTCATCCAAGAGCTAGCGGAAGATGGGAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR GCA 90 bp | TTCGCCCATTTTCCTGGGTGGCTTCAGTGGACAGACAGTCACCTCATAACCATACCTCCATGCATCTCTTaGCCACCAGGTAGACGACCT | + |
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Preference number: 4 (lower is better) Translates to: FAHFPGWLQWTDSHLITIPPCIS*PPGRRP Trigger: AGGTCGTCTACCTGGTGGGCAAGAGATGCATGGAGG...TATGGTTATGAGGTGACTGTCTGTCCACTGAAGCCACCCAGGAAAATGGGCGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR GCA 90 bp | TTCGCCCATTTTCCTGGGTGGCTTCAGTGGACAGACAGTCACCTCATAACCATAGACGGAAGACCTCCATaGATCTCTTGCCCACCAGGT | + |
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Preference number: 4 (lower is better) Translates to: FAHFPGWLQWTDSHLITIDGRPP*ISCPPG Trigger: ACCTGGTGGGCAAGAGATGCATGGAGGTCTTCCGTC...TATGGTTATGAGGTGACTGTCTGTCCACTGAAGCCACCCAGGAAAATGGGCGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR GCA 90 bp | ATCCCCACCAGCCATCAAGTCCCTGGAGGCTCAAGTTCTAGGGACTCAAGGGTGCATAGTCCTTGTAAATaGAATGGAAGATGTAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: IPTSHQVPGGSSSRDSRVHSPCK*NGRCRE Trigger: TTCTCTACATCTTCCATTGCATTTACAAGGACTATG...CACCCTTGAGTCCCTAGAACTTGAGCCTCCAGGGACTTGATGGCTGGTGGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR CCA 90 bp | TTTATTAATGGAGTTGAGGTCCTCATTGACAAATATAACATCCCCACCAGCCATGTTGCTGTACAGGGCTaGGGCATTGGGCCCATGTTT | + |
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Preference number: 4 (lower is better) Translates to: FINGVEVLIDKYNIPTSHVAVQG*GIGPMF Trigger: AAACATGGGCCCAATGCCCCAGCCCTGTACAGCAAC...ATGGCTGGTGGGGATGTTATATTTGTCAATGAGGACCTCAACTCCATTAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR TCA 90 bp | TTTATTAATGGAGTTGAGGTCCTCATTGACAAATATAACATCCCCACCAGCCATGCTTGGTATTGCAGATaGAATCCTTTTGATCGTCGT | + |
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Preference number: 4 (lower is better) Translates to: FINGVEVLIDKYNIPTSHAWYCR*NPFDRR Trigger: ACGACGATCAAAAGGATTTCATCTGCAATACCAAGC...ATGGCTGGTGGGGATGTTATATTTGTCAATGAGGACCTCAACTCCATTAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| 3UTR CAA 72 bp | GGAACATCATATTTATTAATGGAGTTGAGGTCCTCATaGACAAATATAACATCCCCACCAGCCATCAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: GTSYLLMELRSS*TNITSPPAIKS Trigger: GGACTTGATGGCTGGTGGGGATGTTATATTTGTCAATGAGGACCTCAACTCCATTAATAAATATGATGTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR GCA 90 bp | TTATTAATGGAGTTGAGGTCCTCATTGACAAATATAACATCCCCACCAGCCATCCATAGTCCTTGTAAATaGAATGGAAGATGTAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: LLMELRSSLTNITSPPAIHSPCK*NGRCRE Trigger: TTCTCTACATCTTCCATTGCATTTACAAGGACTATG...GATGGCTGGTGGGGATGTTATATTTGTCAATGAGGACCTCAACTCCATTAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS GCA 90 bp | CCTCCTTTGGAGATCACATACGGTGGGCACGTATCTGGCAGTTGGTaGCTCCTGGAAGCTTTCCGGCGCCGGGGACGGAAGACCTCCATG | + |
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Preference number: 5 (lower is better) Translates to: PPLEITYGGHVSGSW*LLEAFRRRGRKTSM Trigger: CATGGAGGTCTTCCGTCCCCGGCGCCGGAAAGCTTCCAGGAGGCACCAACTGCCAGATACGTGCCCACCGTATGTGATCTCCAAAGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS CCA 90 bp | TGGAGATCACATACGGTGGGCACGTATCTGGCAGTTGGTGCCTCCTaGAAGCTTTCCGGCGCCGGGGACGGAAGACCTCCATGCATCTCT | + |
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Preference number: 5 (lower is better) Translates to: WRSHTVGTYLAVGAS*KLSGAGDGRPPCIS Trigger: AGAGATGCATGGAGGTCTTCCGTCCCCGGCGCCGGAAAGCTTCCAGGAGGCACCAACTGCCAGATACGTGCCCACCGTATGTGATCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS CCA 90 bp | TTGAGGGTGACCTCCTTTGGAGATCACATACGGTGGGCACGTATCTaGCAGTTGGTGCCTCCTGGAAGCTTTCCGGCGCCGGGGACGGAA | + |
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Preference number: 5 (lower is better) Translates to: LRVTSFGDHIRWARI*QLVPPGSFPAPGTE Trigger: TTCCGTCCCCGGCGCCGGAAAGCTTCCAGGAGGCACCAACTGCCAGATACGTGCCCACCGTATGTGATCTCCAAAGGAGGTCACCCTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR CAA 90 bp | TCCCCACAGCCATGTTTCCCACCTGACCTGCTGCAGAAGACCACACTCCCTTCGTACAGGGCTGGGGCATaGGGCCCATGTTTGAGGCGA | + |
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Preference number: 5 (lower is better) Translates to: SPQPCFPPDLLQKTTLPSYRAGA*GPCLRR Trigger: TCGCCTCAAACATGGGCCCAATGCCCCAGCCCTGTA...CGAAGGGAGTGTGGTCTTCTGCAGCAGGTCAGGTGGGAAACATGGCTGTGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR CAA 90 bp | GGGTGCTTCCCATCTTCCGCTAGCTCTTGGATGAACTTCTGGAGTCCCCACAGCTACAGGGCTGGGGCATaGGGCCCATGTTTGAGGCGA | + |
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Preference number: 5 (lower is better) Translates to: GCFPSSASSWMNFWSPHSYRAGA*GPCLRR Trigger: TCGCCTCAAACATGGGCCCAATGCCCCAGCCCTGTA...GCTGTGGGGACTCCAGAAGTTCATCCAAGAGCTAGCGGAAGATGGGAAGCACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR CAA 90 bp | CTGGAGTCCCCACAGCCATGTTTCCCACCTGACCTGCTGCAGAAGACCACACTCGAGTCCACAGCAGCCTaGAAGATGAGACTCAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: LESPQPCFPPDLLQKTTLESTAA*KMRLSR Trigger: CCTGCTGAGTCTCATCTTCAAGGCTGCTGTGGACTC...GAGTGTGGTCTTCTGCAGCAGGTCAGGTGGGAAACATGGCTGTGGGGACTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS CCA 90 bp | CGGCCTTTGTTAGGATCACGCTCTCATCTTGAGGGTGACCTCCTTTaGAGATCACATACGGTGGGCACGTATCTGGCAGTTGGTGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: RPLLGSRSHLEGDLL*RSHTVGTYLAVGAS Trigger: GGAGGCACCAACTGCCAGATACGTGCCCACCGTATGTGATCTCCAAAGGAGGTCACCCTCAAGATGAGAGCGTGATCCTAACAAAGGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR CAA 90 bp | GAGTCCCCACAGCCATGTTTCCCACCTGACCTGCTGCAGAAGACCACACTCCCTGCAGATGAAATCCTTTaGATCGTCGTCCCACACCTC | + |
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Preference number: 5 (lower is better) Translates to: ESPQPCFPPDLLQKTTLPADEIL*IVVPHL Trigger: GAGGTGTGGGACGACGATCAAAAGGATTTCATCTGC...AGGGAGTGTGGTCTTCTGCAGCAGGTCAGGTGGGAAACATGGCTGTGGGGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR CAA 90 bp | TGCTTCCCATCTTCCGCTAGCTCTTGGATGAACTTCTGGAGTCCCCACAGCCATCTCTTCTTGCTCAGGTaGCTGTACAGGGCTGGGGCA | + |
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Preference number: 5 (lower is better) Translates to: CFPSSASSWMNFWSPHSHLFLLR*LYRAGA Trigger: TGCCCCAGCCCTGTACAGCAACCTGAGCAAGAAGAG...ATGGCTGTGGGGACTCCAGAAGTTCATCCAAGAGCTAGCGGAAGATGGGAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR CAA 90 bp | CCATGTTTCCCACCTGACCTGCTGCAGAAGACCACACTCCCTTCGCCCATTTTCGAGTCCACAGCAGCCTaGAAGATGAGACTCAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: PCFPPDLLQKTTLPSPIFESTAA*KMRLSR Trigger: CCTGCTGAGTCTCATCTTCAAGGCTGCTGTGGACTC...GAAAATGGGCGAAGGGAGTGTGGTCTTCTGCAGCAGGTCAGGTGGGAAACATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR CAA 90 bp | TGCTTCCCATCTTCCGCTAGCTCTTGGATGAACTTCTGGAGTCCCCACAGCCATGCAGATGAAATCCTTTaGATCGTCGTCCCACACCTC | + |
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Preference number: 5 (lower is better) Translates to: CFPSSASSWMNFWSPHSHADEIL*IVVPHL Trigger: GAGGTGTGGGACGACGATCAAAAGGATTTCATCTGC...ATGGCTGTGGGGACTCCAGAAGTTCATCCAAGAGCTAGCGGAAGATGGGAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS-3UTR CAA 90 bp | TTCGCCCATTTTCCTGGGTGGCTTCAGTGGACAGACAGTCACCTCATAACCATAACGACCTCACTGAGGTaGAGTAGAATACAAATGGCT | + |
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Preference number: 5 (lower is better) Translates to: FAHFPGWLQWTDSHLITITTSLR*SRIQMA Trigger: AGCCATTTGTATTCTACTCAACCTCAGTGAGGTCGT...TATGGTTATGAGGTGACTGTCTGTCCACTGAAGCCACCCAGGAAAATGGGCGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS CCA 72 bp | TTGGAGATCACATACGGTGGGCACGTATCTGGCAGTTaGTGCCTCCTGGAAGCTTTCCGGCGCCGGGGACGG | + |
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Preference number: 6 (lower is better) Translates to: LEITYGGHVSGS*CLLEAFRRRGR Trigger: CCGTCCCCGGCGCCGGAAAGCTTCCAGGAGGCACCAACTGCCAGATACGTGCCCACCGTATGTGATCTCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS CAA 90 bp | GTGACCTCCTTTGGAGATCACATACGGTGGGCACGTATCTGGCAGTaGGTGCCTCCTGGAAGCTTTCCGGCGCCGGGGACGGAAGACCTC | + |
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Preference number: 6 (lower is better) Translates to: VTSFGDHIRWARIWQ*VPPGSFPAPGTEDL Trigger: GAGGTCTTCCGTCCCCGGCGCCGGAAAGCTTCCAGGAGGCACCAACTGCCAGATACGTGCCCACCGTATGTGATCTCCAAAGGAGGTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS CAA 72 bp | TTTGGAGATCACATACGGTGGGCACGTATCTGGCAGTaGGTGCCTCCTGGAAGCTTTCCGGCGCCGGGGACG | + |
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Preference number: 6 (lower is better) Translates to: FGDHIRWARIWQ*VPPGSFPAPGT Trigger: CGTCCCCGGCGCCGGAAAGCTTCCAGGAGGCACCAACTGCCAGATACGTGCCCACCGTATGTGATCTCCAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS CCA 72 bp | ACCTCCTTTGGAGATCACATACGGTGGGCACGTATCTaGCAGTTGGTGCCTCCTGGAAGCTTTCCGGCGCCG | + |
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Preference number: 6 (lower is better) Translates to: TSFGDHIRWARI*QLVPPGSFPAP Trigger: CGGCGCCGGAAAGCTTCCAGGAGGCACCAACTGCCAGATACGTGCCCACCGTATGTGATCTCCAAAGGAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS CCA 72 bp | GCCACCCCTCTTCTTGCTCAGGTTGCTGTACAGGGCTaGGGCATTGGGCCCATGTTTGAGGCGATGTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: ATPLLAQVAVQG*GIGPMFEAMFP Trigger: AGGAAACATCGCCTCAAACATGGGCCCAATGCCCCAGCCCTGTACAGCAACCTGAGCAAGAAGAGGGGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS CAA 90 bp | AGGCCACCCCTCTTCTTGCTCAGGTTGCTGTACAGGGCTGGGGCATaGGGCCCATGTTTGAGGCGATGTTTCCTTTCTCGCTCTTCACGA | + |
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Preference number: 6 (lower is better) Translates to: RPPLFLLRLLYRAGA*GPCLRRCFLSRSSR Trigger: TCGTGAAGAGCGAGAAAGGAAACATCGCCTCAAACATGGGCCCAATGCCCCAGCCCTGTACAGCAACCTGAGCAAGAAGAGGGGTGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS CAA 72 bp | GATACACACCTGCATCCACCGTGGCCATCCCGGCCTTaGTTAGGATCACGCTCTCATCTTGAGGGTGACCTC | + |
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Preference number: 6 (lower is better) Translates to: DTHLHPPWPSRP*LGSRSHLEGDL Trigger: GAGGTCACCCTCAAGATGAGAGCGTGATCCTAACAAAGGCCGGGATGGCCACGGTGGATGCAGGTGTGTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS CAA 72 bp | CTCTTCTTGCTCAGGTTGCTGTACAGGGCTGGGGCATaGGGCCCATGTTTGAGGCGATGTTTCCTTTCTCGC | + |
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Preference number: 6 (lower is better) Translates to: LFLLRLLYRAGA*GPCLRRCFLSR Trigger: GCGAGAAAGGAAACATCGCCTCAAACATGGGCCCAATGCCCCAGCCCTGTACAGCAACCTGAGCAAGAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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| CDS CCA 72 bp | TTAGGATCACGCTCTCATCTTGAGGGTGACCTCCTTTaGAGATCACATACGGTGGGCACGTATCTGGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: LGSRSHLEGDLL*RSHTVGTYLAV Trigger: AACTGCCAGATACGTGCCCACCGTATGTGATCTCCAAAGGAGGTCACCCTCAAGATGAGAGCGTGATCCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060419.2 ENSMUST00000106090.8 |
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