Pregenerated sensors for GJB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047797Ensembl transcript IDs: ENSMUST00000052130.14, ENSMUST00000119080.8, ENSMUST00000119190.2
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTCTCCATAACTCCCTCACCCTAGATGTGTCCTCTTCTCCCCCGTaGCAGGCAGCAAGGCAAGCTCCCATCCCTTCTCCATCCACAAGG | + |
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Preference number: 1 (lower is better) Translates to: SLHNSLTLDVSSSPP*QAARQAPIPSPSTR Trigger: CCTTGTGGATGGAGAAGGGATGGGAGCTTGCCTTGCTGCCTGCCACGGGGGAGAAGAGGACACATCTAGGGTGAGGGAGTTATGGAGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| 3UTR GCA 90 bp | GGACTGGGGGCAGCCCTGACCAATCCCCACTCCGATTTATCTGCCTaGTTCTCTCTCCATAACTCCCTCACCCTAGATGTGTCCTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: GLGAALTNPHSDLSA*FSLHNSLTLDVSSS Trigger: AGAAGAGGACACATCTAGGGTGAGGGAGTTATGGAGAGAGAAGCAGGCAGATAAATCGGAGTGGGGATTGGTCAGGGCTGCCCCCAGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| 3UTR-3UTR GCA 90 bp | AGATGTGTCCTCTTCTCCCCCGTGGCAGGCAGCAAGGCAAGCTCCCATCCCTTCGCCCCTCCTCCACTCTaGTTGCCCACATCCCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: RCVLFSPVAGSKASSHPFAPPPL*LPTSLP Trigger: GGGGAGGGATGTGGGCAAGCAGAGTGGAGGAGGGGC...GAAGGGATGGGAGCTTGCCTTGCTGCCTGCCACGGGGGAGAAGAGGACACATCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| 3UTR-3UTR GCA 90 bp | AGATGTGTCCTCTTCTCCCCCGTGGCAGGCAGCAAGGCAAGCTCCCATCCCTTCCTCCTCCACTCTGCTTaGCCACATCCCTCCCCACCG | + |
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Preference number: 2 (lower is better) Translates to: RCVLFSPVAGSKASSHPFLLHSA*PHPSPP Trigger: CGGTGGGGAGGGATGTGGGCAAGCAGAGTGGAGGAG...GAAGGGATGGGAGCTTGCCTTGCTGCCTGCCACGGGGGAGAAGAGGACACATCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| 3UTR-3UTR GCA 90 bp | GGACTGGGGGCAGCCCTGACCAATCCCCACTCCGATTTATCTGCCTGCTTCTCTGCCCCTCCTCCACTCTaGTTGCCCACATCCCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: GLGAALTNPHSDLSACFSAPPPL*LPTSLP Trigger: GGGGAGGGATGTGGGCAAGCAGAGTGGAGGAGGGGC...AGAGAAGCAGGCAGATAAATCGGAGTGGGGATTGGTCAGGGCTGCCCCCAGTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCCTCTTCTCCCCCGTGGCAGGCAGCAAGGCAAGCTCCCATCCCTTCTCCATGAGGGAGGGGTGGGATaGGAGGTTGCCTGGTACTGG | + |
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Preference number: 2 (lower is better) Translates to: CPLLPRGRQQGKLPSLLHEGGVG*EVAWYW Trigger: CCAGTACCAGGCAACCTCCCATCCCACCCCTCCCTC...ATGGAGAAGGGATGGGAGCTTGCCTTGCTGCCTGCCACGGGGGAGAAGAGGACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| 3UTR-3UTR CCA 90 bp | AACCTTGAGCCCTGTTGTAGAAGTGGCTCCCCACTCCCCAGCCGGCCAGGTCTTAGGGTGAGGGAGGGGTaGGATGGGAGGTTGCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: NLEPCCRSGSPLPSRPGLRVREG*DGRLPG Trigger: ACCAGGCAACCTCCCATCCCACCCCTCCCTCACCCT...AAGACCTGGCCGGCTGGGGAGTGGGGAGCCACTTCTACAACAGGGCTCAAGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| 3UTR-3UTR GCA 90 bp | GGACTGGGGGCAGCCCTGACCAATCCCCACTCCGATTTATCTGCCTGCTTCTCTCTCCTCCACTCTGCTTaGCCACATCCCTCCCCACCG | + |
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Preference number: 2 (lower is better) Translates to: GLGAALTNPHSDLSACFSLLHSA*PHPSPP Trigger: CGGTGGGGAGGGATGTGGGCAAGCAGAGTGGAGGAG...AGAGAAGCAGGCAGATAAATCGGAGTGGGGATTGGTCAGGGCTGCCCCCAGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGGGGCAGCCCTGACCAATCCCCACTCCGATTTATCTGCCTGCTTCTCTCTCGGGTACCAGACAGCATaGGGGTTAAGATTAGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: LGAALTNPHSDLSACFSLGYQTA*GLRLVS Trigger: GGAAACTAATCTTAACCCCCATGCTGTCTGGTACCC...GAGAGAGAAGCAGGCAGATAAATCGGAGTGGGGATTGGTCAGGGCTGCCCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| 3UTR-3UTR TCA 90 bp | ATCCCTTCTCCATCCACAAGGCAGAGCCCCTCCTCCACTCTGCTTGCCCACATCAAGGGAGGGAAGGTTTaGTGGAGTAATAATCCCTAT | + |
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Preference number: 2 (lower is better) Translates to: IPSPSTRQSPSSTLLAHIKGGKV*WSNNPY Trigger: ATAGGGATTATTACTCCATCAAACCTTCCCTCCCTT...GATGTGGGCAAGCAGAGTGGAGGAGGGGCTCTGCCTTGTGGATGGAGAAGGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAGGAAAGGGTATAGGCAGAAAGAATTGCCCACACCATTAATAACCTTGAGCGAGGGAGGGGTGGGATaGGAGGTTGCCTGGTACTGG | + |
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Preference number: 2 (lower is better) Translates to: KRKGYRQKELPTPLITLSEGGVG*EVAWYW Trigger: CCAGTACCAGGCAACCTCCCATCCCACCCCTCCCTC...GCTCAAGGTTATTAATGGTGTGGGCAATTCTTTCTGCCTATACCCTTTCCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAGGAAAGGGTATAGGCAGAAAGAATTGCCCACACCATTAATAACCTTGAGCAGGGTGAGGGAGGGGTaGGATGGGAGGTTGCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: KRKGYRQKELPTPLITLSRVREG*DGRLPG Trigger: ACCAGGCAACCTCCCATCCCACCCCTCCCTCACCCT...GCTCAAGGTTATTAATGGTGTGGGCAATTCTTTCTGCCTATACCCTTTCCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| 3UTR-3UTR TCA 90 bp | ACCAATCCCCACTCCGATTTATCTGCCTGCTTCTCTCTCCATAACTCCCTCACCAAGGGAGGGAAGGTTTaGTGGAGTAATAATCCCTAT | + |
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Preference number: 2 (lower is better) Translates to: TNPHSDLSACFSLHNSLTKGGKV*WSNNPY Trigger: ATAGGGATTATTACTCCATCAAACCTTCCCTCCCTT...GGTGAGGGAGTTATGGAGAGAGAAGCAGGCAGATAAATCGGAGTGGGGATTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| 3UTR-3UTR CCA 90 bp | GTTAAGATTAGTTTCCTAATTGGAAACACCTTCAGAACATCTCATCCCTCGTTTGAGGGAGGGGTGGGATaGGAGGTTGCCTGGTACTGG | + |
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Preference number: 2 (lower is better) Translates to: VKISFLIGNTFRTSHPSFEGGVG*EVAWYW Trigger: CCAGTACCAGGCAACCTCCCATCCCACCCCTCCCTC...AAACGAGGGATGAGATGTTCTGAAGGTGTTTCCAATTAGGAAACTAATCTTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| 3UTR-3UTR TCA 90 bp | ACCTTCAGAACATCTCATCCCTCGTTTCAGGGAGAGGGAAGAGGAAAGGGTATAAAGGGAGGGAAGGTTTaGTGGAGTAATAATCCCTAT | + |
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Preference number: 2 (lower is better) Translates to: TFRTSHPSFQGEGRGKGIKGGKV*WSNNPY Trigger: ATAGGGATTATTACTCCATCAAACCTTCCCTCCCTT...TATACCCTTTCCTCTTCCCTCTCCCTGAAACGAGGGATGAGATGTTCTGAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| 3UTR-3UTR CAA 90 bp | TGTCCTCTTCTCCCCCGTGGCAGGCAGCAAGGCAAGCTCCCATCCCTTCTCCATCAGCCGGCCAGGTCTTaGACAGAAGGCTCTCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: CPLLPRGRQQGKLPSLLHQPARS*TEGSLR Trigger: CCTCAGAGAGCCTTCTGTCAAAGACCTGGCCGGCTG...ATGGAGAAGGGATGGGAGCTTGCCTTGCTGCCTGCCACGGGGGAGAAGAGGACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| 3UTR CCA 72 bp | AACTCCCTCACCCTAGATGTGTCCTCTTCTCCCCCGTaGCAGGCAGCAAGGCAAGCTCCCATCCCTTCTCCA | + |
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Preference number: 3 (lower is better) Translates to: NSLTLDVSSSPP*QAARQAPIPSP Trigger: TGGAGAAGGGATGGGAGCTTGCCTTGCTGCCTGCCACGGGGGAGAAGAGGACACATCTAGGGTGAGGGAGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| 3UTR-3UTR CAA 90 bp | CTTCAGAACATCTCATCCCTCGTTTCAGGGAGAGGGAAGAGGAAAGGGTATAGGCAGCCGGCCAGGTCTTaGACAGAAGGCTCTCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: LQNISSLVSGRGKRKGYRQPARS*TEGSLR Trigger: CCTCAGAGAGCCTTCTGTCAAAGACCTGGCCGGCTG...CCTATACCCTTTCCTCTTCCCTCTCCCTGAAACGAGGGATGAGATGTTCTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR GCA 90 bp | CTTGCCCACATCCCTCCCCACCGACATGACTCCCAAAGTGGGGTACCAGACAGCCGAGCCCGGCCCCTGTaGCAGGGCTGCGGCGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: LAHIPPHRHDSQSGVPDSRARPL*QGCGAV Trigger: TACTGCGCCGCAGCCCTGGCACAGGGGCCGGGCTCG...GCTGTCTGGTACCCCACTTTGGGAGTCATGTCGGTGGGGAGGGATGTGGGCAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR GCA 90 bp | TGGCTCCCCACTCCCCAGCCGGCCAGGTCTTTGACAGAAGGCTCTCTGAGGAAGCGAAGCCCGAGCCCTTaGGGGAGGGCGGATTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: WLPTPQPARSLTEGSLRKRSPSP*GRADWS Trigger: GCTCCAATCCGCCCTCCCGCAAGGGCTCGGGCTTCG...CTTCCTCAGAGAGCCTTCTGTCAAAGACCTGGCCGGCTGGGGAGTGGGGAGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR GCA 90 bp | CTGGGGGCAGCCCTGACCAATCCCCACTCCGATTTATCTGCCTGCTTCTCTCTCCGAGCCCGGCCCCTGTaGCAGGGCTGCGGCGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: LGAALTNPHSDLSACFSLRARPL*QGCGAV Trigger: TACTGCGCCGCAGCCCTGGCACAGGGGCCGGGCTCG...GAGAGAGAAGCAGGCAGATAAATCGGAGTGGGGATTGGTCAGGGCTGCCCCCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR GCA 90 bp | CTTGCCCACATCCCTCCCCACCGACATGACTCCCAAAGTGGGGTACCAGACAGCCGAAGCCCGAGCCCTTaGGGGAGGGCGGATTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LAHIPPHRHDSQSGVPDSRSPSP*GRADWS Trigger: GCTCCAATCCGCCCTCCCGCAAGGGCTCGGGCTTCG...GCTGTCTGGTACCCCACTTTGGGAGTCATGTCGGTGGGGAGGGATGTGGGCAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR GCA 90 bp | ATCCCTTCTCCATCCACAAGGCAGAGCCCCTCCTCCACTCTGCTTGCCCACATCCGAAGCCCGAGCCCTTaGGGGAGGGCGGATTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: IPSPSTRQSPSSTLLAHIRSPSP*GRADWS Trigger: GCTCCAATCCGCCCTCCCGCAAGGGCTCGGGCTTCG...GATGTGGGCAAGCAGAGTGGAGGAGGGGCTCTGCCTTGTGGATGGAGAAGGGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR TCA 90 bp | CTTGCCCACATCCCTCCCCACCGACATGACTCCCAAAGTGGGGTACCAGACAGCCTGCTTGTATTCAGGTaGGAGGCGGTGGCCGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: LAHIPPHRHDSQSGVPDSLLVFR*EAVAEA Trigger: GGCTTCGGCCACCGCCTCTCACCTGAATACAAGCAG...GCTGTCTGGTACCCCACTTTGGGAGTCATGTCGGTGGGGAGGGATGTGGGCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR TCA 90 bp | AGATGTGTCCTCTTCTCCCCCGTGGCAGGCAGCAAGGCAAGCTCCCATCCCTTCCTGCTTGTATTCAGGTaGGAGGCGGTGGCCGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: RCVLFSPVAGSKASSHPFLLVFR*EAVAEA Trigger: GGCTTCGGCCACCGCCTCTCACCTGAATACAAGCAG...GAAGGGATGGGAGCTTGCCTTGCTGCCTGCCACGGGGGAGAAGAGGACACATCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR GCA 90 bp | TGGCTCCCCACTCCCCAGCCGGCCAGGTCTTTGACAGAAGGCTCTCTGAGGAAGGTGAGCTACGTGCATTaGCACGAGGAGAGCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: WLPTPQPARSLTEGSLRKVSYVH*HEESWG Trigger: ACCCCAGCTCTCCTCGTGGCAATGCACGTAGCTCAC...CTTCCTCAGAGAGCCTTCTGTCAAAGACCTGGCCGGCTGGGGAGTGGGGAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR GCA 90 bp | AGATGTGTCCTCTTCTCCCCCGTGGCAGGCAGCAAGGCAAGCTCCCATCCCTTCCCCCTGTGCCAGGGCTaGGGCGCAGTATGTCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: RCVLFSPVAGSKASSHPFPLCQG*GAVCLS Trigger: TGAAAGACATACTGCGCCGCAGCCCTGGCACAGGGG...GAAGGGATGGGAGCTTGCCTTGCTGCCTGCCACGGGGGAGAAGAGGACACATCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR CCA 90 bp | TTAATAACCTTGAGCCCTGTTGTAGAAGTGGCTCCCCACTCCCCAGCCGGCCAGTCAGGTGAGAGGCGGTaGCCGAAGCCCGAGCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: LITLSPVVEVAPHSPAGQSGERR*PKPEPL Trigger: CAAGGGCTCGGGCTTCGGCCACCGCCTCTCACCTGA...CTGGCCGGCTGGGGAGTGGGGAGCCACTTCTACAACAGGGCTCAAGGTTATTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR TCA 90 bp | ACCTTGAGCCCTGTTGTAGAAGTGGCTCCCCACTCCCCAGCCGGCCAGGTCTTTGGAAGGCTTCACACTTaGCCAGCCGCACCATGGCAT | + |
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Preference number: 4 (lower is better) Translates to: TLSPVVEVAPHSPAGQVFGRLHT*PAAPWH Trigger: ATGCCATGGTGCGGCTGGTCAAGTGTGAAGCCTTCC...AAAGACCTGGCCGGCTGGGGAGTGGGGAGCCACTTCTACAACAGGGCTCAAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR TCA 90 bp | ATCCCTTCTCCATCCACAAGGCAGAGCCCCTCCTCCACTCTGCTTGCCCACATCCTGCTTGTATTCAGGTaGGAGGCGGTGGCCGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: IPSPSTRQSPSSTLLAHILLVFR*EAVAEA Trigger: GGCTTCGGCCACCGCCTCTCACCTGAATACAAGCAG...GATGTGGGCAAGCAGAGTGGAGGAGGGGCTCTGCCTTGTGGATGGAGAAGGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR TCA 90 bp | CTTGCCCACATCCCTCCCCACCGACATGACTCCCAAAGTGGGGTACCAGACAGCGCCGATTCACGCCACTaGGCAAGGTGTATAGACCTG | + |
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Preference number: 4 (lower is better) Translates to: LAHIPPHRHDSQSGVPDSADSRH*ARCIDL Trigger: CAGGTCTATACACCTTGCTCAGTGGCGTGAATCGGC...GCTGTCTGGTACCCCACTTTGGGAGTCATGTCGGTGGGGAGGGATGTGGGCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR GCA 90 bp | AACCTTGAGCCCTGTTGTAGAAGTGGCTCCCCACTCCCCAGCCGGCCAGGTCTTCCAATGGCTGTAGAGTaGCGATTCACGCCACTGAGC | + |
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Preference number: 4 (lower is better) Translates to: NLEPCCRSGSPLPSRPGLPMAVE*RFTPLS Trigger: GCTCAGTGGCGTGAATCGGCACTCTACAGCCATTGG...AAGACCTGGCCGGCTGGGGAGTGGGGAGCCACTTCTACAACAGGGCTCAAGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR TCA 90 bp | CATAACTCCCTCACCCTAGATGTGTCCTCTTCTCCCCCGTGGCAGGCAGCAAGGCCACCACAGTGTCCCTaGGATGTGCACCTTGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: HNSLTLDVSSSPPWQAARPPQCP*DVHLVS Trigger: AGACACAAGGTGCACATCTCAGGGACACTGTGGTGG...CCTTGCTGCCTGCCACGGGGGAGAAGAGGACACATCTAGGGTGAGGGAGTTATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR GCA 90 bp | TTAATAACCTTGAGCCCTGTTGTAGAAGTGGCTCCCCACTCCCCAGCCGGCCAGGTGAGCTACGTGCATTaGCACGAGGAGAGCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: LITLSPVVEVAPHSPAGQVSYVH*HEESWG Trigger: ACCCCAGCTCTCCTCGTGGCAATGCACGTAGCTCAC...CTGGCCGGCTGGGGAGTGGGGAGCCACTTCTACAACAGGGCTCAAGGTTATTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR CCA 90 bp | CTTGCCCACATCCCTCCCCACCGACATGACTCCCAAAGTGGGGTACCAGACAGCCTGTTGCAGCCCGGCTaGAGGGTGTTACAGATGAAA | + |
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Preference number: 4 (lower is better) Translates to: LAHIPPHRHDSQSGVPDSLLQPG*RVLQMK Trigger: TTTCATCTGTAACACCCTCCAGCCGGGCTGCAACAG...GCTGTCTGGTACCCCACTTTGGGAGTCATGTCGGTGGGGAGGGATGTGGGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR CCA 90 bp | TGTCCTCTTCTCCCCCGTGGCAGGCAGCAAGGCAAGCTCCCATCCCTTCTCCATCTGTTGCAGCCCGGCTaGAGGGTGTTACAGATGAAA | + |
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Preference number: 4 (lower is better) Translates to: CPLLPRGRQQGKLPSLLHLLQPG*RVLQMK Trigger: TTTCATCTGTAACACCCTCCAGCCGGGCTGCAACAG...ATGGAGAAGGGATGGGAGCTTGCCTTGCTGCCTGCCACGGGGGAGAAGAGGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR TCA 90 bp | TTAATAACCTTGAGCCCTGTTGTAGAAGTGGCTCCCCACTCCCCAGCCGGCCAGGCCGATTCACGCCACTaGGCAAGGTGTATAGACCTG | + |
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Preference number: 4 (lower is better) Translates to: LITLSPVVEVAPHSPAGQADSRH*ARCIDL Trigger: CAGGTCTATACACCTTGCTCAGTGGCGTGAATCGGC...CTGGCCGGCTGGGGAGTGGGGAGCCACTTCTACAACAGGGCTCAAGGTTATTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR TCA 90 bp | TTAATAACCTTGAGCCCTGTTGTAGAAGTGGCTCCCCACTCCCCAGCCGGCCAGCCACCACAGTGTCCCTaGGATGTGCACCTTGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: LITLSPVVEVAPHSPAGQPPQCP*DVHLVS Trigger: AGACACAAGGTGCACATCTCAGGGACACTGTGGTGG...CTGGCCGGCTGGGGAGTGGGGAGCCACTTCTACAACAGGGCTCAAGGTTATTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR GCA 90 bp | CTGGGGGCAGCCCTGACCAATCCCCACTCCGATTTATCTGCCTGCTTCTCTCTCGCAGATGCCGGAGGCTaGGAGCATAAAGACAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: LGAALTNPHSDLSACFSLADAGG*EHKDSE Trigger: TTCACTGTCTTTATGCTCGCAGCCTCCGGCATCTGC...GAGAGAGAAGCAGGCAGATAAATCGGAGTGGGGATTGGTCAGGGCTGCCCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR CCA 90 bp | GGACTGGGGGCAGCCCTGACCAATCCCCACTCCGATTTATCTGCCTGCTTCTCTTGCCACGAGGAGAGCTaGGGTGGAAACCAAGATAAG | + |
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Preference number: 4 (lower is better) Translates to: GLGAALTNPHSDLSACFSCHEES*GGNQDK Trigger: CTTATCTTGGTTTCCACCCCAGCTCTCCTCGTGGCA...AGAGAAGCAGGCAGATAAATCGGAGTGGGGATTGGTCAGGGCTGCCCCCAGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR TCA 90 bp | AAGAGGAAAGGGTATAGGCAGAAAGAATTGCCCACACCATTAATAACCTTGAGCGGATTGGAGCGGCGCTaGGCACGGCGGGCACAGGCC | + |
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Preference number: 4 (lower is better) Translates to: KRKGYRQKELPTPLITLSGLERR*ARRAQA Trigger: GGCCTGTGCCCGCCGTGCTCAGCGCCGCTCCAATCC...GCTCAAGGTTATTAATGGTGTGGGCAATTCTTTCTGCCTATACCCTTTCCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR GCA 90 bp | TTAATAACCTTGAGCCCTGTTGTAGAAGTGGCTCCCCACTCCCCAGCCGGCCAGGCAGATGCCGGAGGCTaGGAGCATAAAGACAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LITLSPVVEVAPHSPAGQADAGG*EHKDSE Trigger: TTCACTGTCTTTATGCTCGCAGCCTCCGGCATCTGC...CTGGCCGGCTGGGGAGTGGGGAGCCACTTCTACAACAGGGCTCAAGGTTATTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR TCA 90 bp | AACCTTGAGCCCTGTTGTAGAAGTGGCTCCCCACTCCCCAGCCGGCCAGGTCTTGATAGAAGACATACATaGAGACAGCCTCGAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NLEPCCRSGSPLPSRPGLDRRHT*RQPRTA Trigger: TGCTGTTCGAGGCTGTCTTCATGTATGTCTTCTATC...AAGACCTGGCCGGCTGGGGAGTGGGGAGCCACTTCTACAACAGGGCTCAAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR TCA 90 bp | CTTGCCCACATCCCTCCCCACCGACATGACTCCCAAAGTGGGGTACCAGACAGCGATAGAAGACATACATaGAGACAGCCTCGAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LAHIPPHRHDSQSGVPDSDRRHT*RQPRTA Trigger: TGCTGTTCGAGGCTGTCTTCATGTATGTCTTCTATC...GCTGTCTGGTACCCCACTTTGGGAGTCATGTCGGTGGGGAGGGATGTGGGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR TCA 90 bp | ATGGGGGTTAAGATTAGTTTCCTAATTGGAAACACCTTCAGAACATCTCATCCCGGATTGGAGCGGCGCTaGGCACGGCGGGCACAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: MGVKISFLIGNTFRTSHPGLERR*ARRAQA Trigger: GGCCTGTGCCCGCCGTGCTCAGCGCCGCTCCAATCC...GGGATGAGATGTTCTGAAGGTGTTTCCAATTAGGAAACTAATCTTAACCCCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR TCA 90 bp | GGACTGGGGGCAGCCCTGACCAATCCCCACTCCGATTTATCTGCCTGCTTCTCTGATAGAAGACATACATaGAGACAGCCTCGAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLGAALTNPHSDLSACFSDRRHT*RQPRTA Trigger: TGCTGTTCGAGGCTGTCTTCATGTATGTCTTCTATC...AGAGAAGCAGGCAGATAAATCGGAGTGGGGATTGGTCAGGGCTGCCCCCAGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR TCA 90 bp | ATCCCTTCTCCATCCACAAGGCAGAGCCCCTCCTCCACTCTGCTTGCCCACATCCGCTCAGCAGCTTGTTaGTCTCATTCTGCTTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: IPSPSTRQSPSSTLLAHIRSAAC*SHSACI Trigger: AATACAAGCAGAATGAGATCAACAAGCTGCTGAGCG...GATGTGGGCAAGCAGAGTGGAGGAGGGGCTCTGCCTTGTGGATGGAGAAGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR TCA 90 bp | ACCTTCAGAACATCTCATCCCTCGTTTCAGGGAGAGGGAAGAGGAAAGGGTATAGGAAGGCTTCACACTTaGCCAGCCGCACCATGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TFRTSHPSFQGEGRGKGIGRLHT*PAAPWH Trigger: ATGCCATGGTGCGGCTGGTCAAGTGTGAAGCCTTCC...TATACCCTTTCCTCTTCCCTCTCCCTGAAACGAGGGATGAGATGTTCTGAAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR GCA 90 bp | TGTCCTCTTCTCCCCCGTGGCAGGCAGCAAGGCAAGCTCCCATCCCTTCTCCATTTGTTGATCTCATTCTaGTTGTATTCAGGTGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CPLLPRGRQQGKLPSLLHLLISF*LYSGER Trigger: CCTCTCACCTGAATACAAGCAGAATGAGATCAACAA...ATGGAGAAGGGATGGGAGCTTGCCTTGCTGCCTGCCACGGGGGAGAAGAGGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR CCA 90 bp | GTACCAGACAGCATGGGGGTTAAGATTAGTTTCCTAATTGGAAACACCTTCAGATCAGGTGAGAGGCGGTaGCCGAAGCCCGAGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VPDSMGVKISFLIGNTFRSGERR*PKPEPL Trigger: CAAGGGCTCGGGCTTCGGCCACCGCCTCTCACCTGA...TCTGAAGGTGTTTCCAATTAGGAAACTAATCTTAACCCCCATGCTGTCTGGTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR GCA 90 bp | ACCTTCAGAACATCTCATCCCTCGTTTCAGGGAGAGGGAAGAGGAAAGGGTATACCAATGGCTGTAGAGTaGCGATTCACGCCACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TFRTSHPSFQGEGRGKGIPMAVE*RFTPLS Trigger: GCTCAGTGGCGTGAATCGGCACTCTACAGCCATTGG...TATACCCTTTCCTCTTCCCTCTCCCTGAAACGAGGGATGAGATGTTCTGAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR CCA 90 bp | GACATGACTCCCAAAGTGGGGTACCAGACAGCATGGGGGTTAAGATTAGTTTCCCTGTTGCAGCCCGGCTaGAGGGTGTTACAGATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: DMTPKVGYQTAWGLRLVSLLQPG*RVLQMK Trigger: TTTCATCTGTAACACCCTCCAGCCGGGCTGCAACAG...GGAAACTAATCTTAACCCCCATGCTGTCTGGTACCCCACTTTGGGAGTCATGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR GCA 90 bp | TTAATAACCTTGAGCCCTGTTGTAGAAGTGGCTCCCCACTCCCCAGCCGGCCAGTTGTTGATCTCATTCTaGTTGTATTCAGGTGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LITLSPVVEVAPHSPAGQLLISF*LYSGER Trigger: CCTCTCACCTGAATACAAGCAGAATGAGATCAACAA...CTGGCCGGCTGGGGAGTGGGGAGCCACTTCTACAACAGGGCTCAAGGTTATTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR GCA 90 bp | ACCTTCAGAACATCTCATCCCTCGTTTCAGGGAGAGGGAAGAGGAAAGGGTATATTCAGAGAGCCATCCTaGTCGCTCAGCAGCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TFRTSHPSFQGEGRGKGIFREPS*SLSSLL Trigger: CAACAAGCTGCTGAGCGAGCAGGATGGCTCTCTGAA...TATACCCTTTCCTCTTCCCTCTCCCTGAAACGAGGGATGAGATGTTCTGAAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR CCA 90 bp | ACCTTCAGAACATCTCATCCCTCGTTTCAGGGAGAGGGAAGAGGAAAGGGTATATGCCACGAGGAGAGCTaGGGTGGAAACCAAGATAAG | + |
|
Preference number: 4 (lower is better) Translates to: TFRTSHPSFQGEGRGKGICHEES*GGNQDK Trigger: CTTATCTTGGTTTCCACCCCAGCTCTCCTCGTGGCA...TATACCCTTTCCTCTTCCCTCTCCCTGAAACGAGGGATGAGATGTTCTGAAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR GCA 90 bp | ATGGGGGTTAAGATTAGTTTCCTAATTGGAAACACCTTCAGAACATCTCATCCCCCCCTGTGCCAGGGCTaGGGCGCAGTATGTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: MGVKISFLIGNTFRTSHPPLCQG*GAVCLS Trigger: TGAAAGACATACTGCGCCGCAGCCCTGGCACAGGGG...GGGATGAGATGTTCTGAAGGTGTTTCCAATTAGGAAACTAATCTTAACCCCCAT 49% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR CCA 90 bp | GTTAAGATTAGTTTCCTAATTGGAAACACCTTCAGAACATCTCATCCCTCGTTTTCAGGTGAGAGGCGGTaGCCGAAGCCCGAGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VKISFLIGNTFRTSHPSFSGERR*PKPEPL Trigger: CAAGGGCTCGGGCTTCGGCCACCGCCTCTCACCTGA...AAACGAGGGATGAGATGTTCTGAAGGTGTTTCCAATTAGGAAACTAATCTTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| 3UTR CAA 72 bp | TATAGGCAGAAAGAATTGCCCACACCATTAATAACCTaGAGCCCTGTTGTAGAAGTGGCTCCCCACTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YRQKELPTPLIT*SPVVEVAPHSP Trigger: TGGGGAGTGGGGAGCCACTTCTACAACAGGGCTCAAGGTTATTAATGGTGTGGGCAATTCTTTCTGCCTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR TCA 90 bp | GTACCAGACAGCATGGGGGTTAAGATTAGTTTCCTAATTGGAAACACCTTCAGAGCCGATTCACGCCACTaGGCAAGGTGTATAGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: VPDSMGVKISFLIGNTFRADSRH*ARCIDL Trigger: CAGGTCTATACACCTTGCTCAGTGGCGTGAATCGGC...TCTGAAGGTGTTTCCAATTAGGAAACTAATCTTAACCCCCATGCTGTCTGGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR GCA 90 bp | GTACCAGACAGCATGGGGGTTAAGATTAGTTTCCTAATTGGAAACACCTTCAGACCAATGGCTGTAGAGTaGCGATTCACGCCACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VPDSMGVKISFLIGNTFRPMAVE*RFTPLS Trigger: GCTCAGTGGCGTGAATCGGCACTCTACAGCCATTGG...TCTGAAGGTGTTTCCAATTAGGAAACTAATCTTAACCCCCATGCTGTCTGGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR TCA 90 bp | ACCTTCAGAACATCTCATCCCTCGTTTCAGGGAGAGGGAAGAGGAAAGGGTATACGCTCAGCAGCTTGTTaGTCTCATTCTGCTTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: TFRTSHPSFQGEGRGKGIRSAAC*SHSACI Trigger: AATACAAGCAGAATGAGATCAACAAGCTGCTGAGCG...TATACCCTTTCCTCTTCCCTCTCCCTGAAACGAGGGATGAGATGTTCTGAAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR GCA 90 bp | AAGAGGAAAGGGTATAGGCAGAAAGAATTGCCCACACCATTAATAACCTTGAGCTTCAGAGAGCCATCCTaGTCGCTCAGCAGCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KRKGYRQKELPTPLITLSFREPS*SLSSLL Trigger: CAACAAGCTGCTGAGCGAGCAGGATGGCTCTCTGAA...GCTCAAGGTTATTAATGGTGTGGGCAATTCTTTCTGCCTATACCCTTTCCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR GCA 90 bp | ATGGGGGTTAAGATTAGTTTCCTAATTGGAAACACCTTCAGAACATCTCATCCCGCAGATGCCGGAGGCTaGGAGCATAAAGACAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: MGVKISFLIGNTFRTSHPADAGG*EHKDSE Trigger: TTCACTGTCTTTATGCTCGCAGCCTCCGGCATCTGC...GGGATGAGATGTTCTGAAGGTGTTTCCAATTAGGAAACTAATCTTAACCCCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR GCA 90 bp | GTTAAGATTAGTTTCCTAATTGGAAACACCTTCAGAACATCTCATCCCTCGTTTTTCAGAGAGCCATCCTaGTCGCTCAGCAGCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VKISFLIGNTFRTSHPSFFREPS*SLSSLL Trigger: CAACAAGCTGCTGAGCGAGCAGGATGGCTCTCTGAA...AAACGAGGGATGAGATGTTCTGAAGGTGTTTCCAATTAGGAAACTAATCTTAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR GCA 90 bp | GGGGTTAAGATTAGTTTCCTAATTGGAAACACCTTCAGAACATCTCATCCCTCGTTGTTGATCTCATTCTaGTTGTATTCAGGTGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GVKISFLIGNTFRTSHPSLLISF*LYSGER Trigger: CCTCTCACCTGAATACAAGCAGAATGAGATCAACAA...CGAGGGATGAGATGTTCTGAAGGTGTTTCCAATTAGGAAACTAATCTTAACCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR TCA 90 bp | GTTAAGATTAGTTTCCTAATTGGAAACACCTTCAGAACATCTCATCCCTCGTTTCGCTCAGCAGCTTGTTaGTCTCATTCTGCTTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: VKISFLIGNTFRTSHPSFRSAAC*SHSACI Trigger: AATACAAGCAGAATGAGATCAACAAGCTGCTGAGCG...AAACGAGGGATGAGATGTTCTGAAGGTGTTTCCAATTAGGAAACTAATCTTAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS TCA 90 bp | TGGCCGAAGCCCGAGCCCTTGCGGGAGGGCGGATTGGAGCGGCGCTaGGCACGGCGGGCACAGGCCCGGATGATGAGGTACACCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: WPKPEPLREGGLERR*ARRAQARMMRYTTS Trigger: GGAGGTGGTGTACCTCATCATCCGGGCCTGTGCCCGCCGTGCTCAGCGCCGCTCCAATCCGCCCTCCCGCAAGGGCTCGGGCTTCGGCCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS GCA 90 bp | TCTGCTTGTATTCAGGTGAGAGGCGGTGGCCGAAGCCCGAGCCCTTaGGGGAGGGCGGATTGGAGCGGCGCTGAGCACGGCGGGCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: SACIQVRGGGRSPSP*GRADWSGAEHGGHR Trigger: CCTGTGCCCGCCGTGCTCAGCGCCGCTCCAATCCGCCCTCCCGCAAGGGCTCGGGCTTCGGCCACCGCCTCTCACCTGAATACAAGCAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR CAA 90 bp | TGTCCTCTTCTCCCCCGTGGCAGGCAGCAAGGCAAGCTCCCATCCCTTCTCCATCCGAAGCCCGAGCCCTaGCGGGAGGGCGGATTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CPLLPRGRQQGKLPSLLHPKPEP*REGGLE Trigger: CTCCAATCCGCCCTCCCGCAAGGGCTCGGGCTTCGG...ATGGAGAAGGGATGGGAGCTTGCCTTGCTGCCTGCCACGGGGGAGAAGAGGACA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS GCA 90 bp | AGCATCGGTCGCTCTTTTCAGCGAGCCCGGCCCCTGTGCCAGGGCTaGGGCGCAGTATGTCTTTCAGAGAGCCATCCTGCTCGCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SIGRSFQRARPLCQG*GAVCLSESHPARSA Trigger: TGCTGAGCGAGCAGGATGGCTCTCTGAAAGACATACTGCGCCGCAGCCCTGGCACAGGGGCCGGGCTCGCTGAAAAGAGCGACCGATGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS GCA 90 bp | AGCAGGCTGAGCATCGGTCGCTCTTTTCAGCGAGCCCGGCCCCTGTaGCAGGGCTGCGGCGCAGTATGTCTTTCAGAGAGCCATCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SRLSIGRSFQRARPL*QGCGAVCLSESHPA Trigger: AGCAGGATGGCTCTCTGAAAGACATACTGCGCCGCAGCCCTGGCACAGGGGCCGGGCTCGCTGAAAAGAGCGACCGATGCTCAGCCTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGGGCAGCCCTGACCAATCCCCACTCCGATTTATCTGCCTGCTTCTCTCTCGGTGAGCTACGTGCATaGCCACGAGGAGAGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LGAALTNPHSDLSACFSLGELRA*PRGELG Trigger: CCCCAGCTCTCCTCGTGGCAATGCACGTAGCTCACC...GAGAGAGAAGCAGGCAGATAAATCGGAGTGGGGATTGGTCAGGGCTGCCCCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGGGCAGCCCTGACCAATCCCCACTCCGATTTATCTGCCTGCTTCTCTCTCGGGAAGGCTTCACACTaGACCAGCCGCACCATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LGAALTNPHSDLSACFSLGKASH*TSRTMA Trigger: TGCCATGGTGCGGCTGGTCAAGTGTGAAGCCTTCCC...GAGAGAGAAGCAGGCAGATAAATCGGAGTGGGGATTGGTCAGGGCTGCCCCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR CAA 90 bp | CTTGCCCACATCCCTCCCCACCGACATGACTCCCAAAGTGGGGTACCAGACAGCACCACCTCCGCCACGTaGAGGATAATGCAGATGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LAHIPPHRHDSQSGVPDSTTSAT*RIMQMP Trigger: CGGCATCTGCATTATCCTCAACGTGGCGGAGGTGGT...GCTGTCTGGTACCCCACTTTGGGAGTCATGTCGGTGGGGAGGGATGTGGGCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR CAA 90 bp | ACCAATCCCCACTCCGATTTATCTGCCTGCTTCTCTCTCCATAACTCCCTCACCCCGAAGCCCGAGCCCTaGCGGGAGGGCGGATTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TNPHSDLSACFSLHNSLTPKPEP*REGGLE Trigger: CTCCAATCCGCCCTCCCGCAAGGGCTCGGGCTTCGG...GGTGAGGGAGTTATGGAGAGAGAAGCAGGCAGATAAATCGGAGTGGGGATTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR CAA 90 bp | CTTCAGAACATCTCATCCCTCGTTTCAGGGAGAGGGAAGAGGAAAGGGTATAGGCCGAAGCCCGAGCCCTaGCGGGAGGGCGGATTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LQNISSLVSGRGKRKGYRPKPEP*REGGLE Trigger: CTCCAATCCGCCCTCCCGCAAGGGCTCGGGCTTCGG...CCTATACCCTTTCCTCTTCCCTCTCCCTGAAACGAGGGATGAGATGTTCTGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR CAA 90 bp | TTAATAACCTTGAGCCCTGTTGTAGAAGTGGCTCCCCACTCCCCAGCCGGCCAGACCACCTCCGCCACGTaGAGGATAATGCAGATGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LITLSPVVEVAPHSPAGQTTSAT*RIMQMP Trigger: CGGCATCTGCATTATCCTCAACGTGGCGGAGGTGGT...CTGGCCGGCTGGGGAGTGGGGAGCCACTTCTACAACAGGGCTCAAGGTTATTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGGGCAGCCCTGACCAATCCCCACTCCGATTTATCTGCCTGCTTCTCTCTCCCTGAGATGTGCACCTaGTGTCTCTTTACCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LGAALTNPHSDLSACFSLPEMCT*CLFTSS Trigger: GGAAGAGGTAAAGAGACACAAGGTGCACATCTCAGG...GAGAGAGAAGCAGGCAGATAAATCGGAGTGGGGATTGGTCAGGGCTGCCCCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR CAA 90 bp | GGACTGGGGGCAGCCCTGACCAATCCCCACTCCGATTTATCTGCCTGCTTCTCTTGCTCGCTCAGCAGCTaGTTGATCTCATTCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GLGAALTNPHSDLSACFSCSLSS*LISFCL Trigger: CAAGCAGAATGAGATCAACAAGCTGCTGAGCGAGCA...AGAGAAGCAGGCAGATAAATCGGAGTGGGGATTGGTCAGGGCTGCCCCCAGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS GCA 90 bp | CCTGTGCCAGGGCTGCGGCGCAGTATGTCTTTCAGAGAGCCATCCTaGTCGCTCAGCAGCTTGTTGATCTCATTCTGCTTGTATTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PVPGLRRSMSFREPS*SLSSLLISFCLYSG Trigger: ACCTGAATACAAGCAGAATGAGATCAACAAGCTGCTGAGCGAGCAGGATGGCTCTCTGAAAGACATACTGCGCCGCAGCCCTGGCACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR CAA 90 bp | ACCTTCAGAACATCTCATCCCTCGTTTCAGGGAGAGGGAAGAGGAAAGGGTATAGGGAAGGCTTCACACTaGACCAGCCGCACCATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TFRTSHPSFQGEGRGKGIGKASH*TSRTMA Trigger: TGCCATGGTGCGGCTGGTCAAGTGTGAAGCCTTCCC...TATACCCTTTCCTCTTCCCTCTCCCTGAAACGAGGGATGAGATGTTCTGAAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR CAA 90 bp | ATCCCTTCTCCATCCACAAGGCAGAGCCCCTCCTCCACTCTGCTTGCCCACATCTCGCTCAGCAGCTTGTaGATCTCATTCTGCTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: IPSPSTRQSPSSTLLAHISLSSL*ISFCLY Trigger: ATACAAGCAGAATGAGATCAACAAGCTGCTGAGCGA...GATGTGGGCAAGCAGAGTGGAGGAGGGGCTCTGCCTTGTGGATGGAGAAGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
||
| CDS-3UTR CAA 90 bp | TTAATAACCTTGAGCCCTGTTGTAGAAGTGGCTCCCCACTCCCCAGCCGGCCAGTCGCTCAGCAGCTTGTaGATCTCATTCTGCTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LITLSPVVEVAPHSPAGQSLSSL*ISFCLY Trigger: ATACAAGCAGAATGAGATCAACAAGCTGCTGAGCGA...CTGGCCGGCTGGGGAGTGGGGAGCCACTTCTACAACAGGGCTCAAGGTTATTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR CAA 90 bp | AAGAGGAAAGGGTATAGGCAGAAAGAATTGCCCACACCATTAATAACCTTGAGCGGTGAGCTACGTGCATaGCCACGAGGAGAGCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: KRKGYRQKELPTPLITLSGELRA*PRGELG Trigger: CCCCAGCTCTCCTCGTGGCAATGCACGTAGCTCACC...GCTCAAGGTTATTAATGGTGTGGGCAATTCTTTCTGCCTATACCCTTTCCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR CAA 90 bp | GGGGTTAAGATTAGTTTCCTAATTGGAAACACCTTCAGAACATCTCATCCCTCGGGTGAGCTACGTGCATaGCCACGAGGAGAGCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: GVKISFLIGNTFRTSHPSGELRA*PRGELG Trigger: CCCCAGCTCTCCTCGTGGCAATGCACGTAGCTCACC...CGAGGGATGAGATGTTCTGAAGGTGTTTCCAATTAGGAAACTAATCTTAACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR CAA 90 bp | GACATGACTCCCAAAGTGGGGTACCAGACAGCATGGGGGTTAAGATTAGTTTCCCCTGAGATGTGCACCTaGTGTCTCTTTACCTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: DMTPKVGYQTAWGLRLVSPEMCT*CLFTSS Trigger: GGAAGAGGTAAAGAGACACAAGGTGCACATCTCAGG...GGAAACTAATCTTAACCCCCATGCTGTCTGGTACCCCACTTTGGGAGTCATGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR CAA 90 bp | AAGAGGAAAGGGTATAGGCAGAAAGAATTGCCCACACCATTAATAACCTTGAGCGGGAAGGCTTCACACTaGACCAGCCGCACCATGGCA | + |
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Preference number: 5 (lower is better) Translates to: KRKGYRQKELPTPLITLSGKASH*TSRTMA Trigger: TGCCATGGTGCGGCTGGTCAAGTGTGAAGCCTTCCC...GCTCAAGGTTATTAATGGTGTGGGCAATTCTTTCTGCCTATACCCTTTCCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR CAA 90 bp | GGGGTTAAGATTAGTTTCCTAATTGGAAACACCTTCAGAACATCTCATCCCTCGAAGCAGTCCACTGTGTaGGGGCAGGGGAAGGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: GVKISFLIGNTFRTSHPSKQSTV*GQGKAS Trigger: TGAAGCCTTCCCCTGCCCCAACACAGTGGACTGCTT...CGAGGGATGAGATGTTCTGAAGGTGTTTCCAATTAGGAAACTAATCTTAACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR CAA 90 bp | AAGAGGAAAGGGTATAGGCAGAAAGAATTGCCCACACCATTAATAACCTTGAGCAAGCAGTCCACTGTGTaGGGGCAGGGGAAGGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: KRKGYRQKELPTPLITLSKQSTV*GQGKAS Trigger: TGAAGCCTTCCCCTGCCCCAACACAGTGGACTGCTT...GCTCAAGGTTATTAATGGTGTGGGCAATTCTTTCTGCCTATACCCTTTCCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR CAA 90 bp | ACCTTCAGAACATCTCATCCCTCGTTTCAGGGAGAGGGAAGAGGAAAGGGTATATGCTCGCTCAGCAGCTaGTTGATCTCATTCTGCTTG | + |
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Preference number: 5 (lower is better) Translates to: TFRTSHPSFQGEGRGKGICSLSS*LISFCL Trigger: CAAGCAGAATGAGATCAACAAGCTGCTGAGCGAGCA...TATACCCTTTCCTCTTCCCTCTCCCTGAAACGAGGGATGAGATGTTCTGAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR CAA 90 bp | GTTAAGATTAGTTTCCTAATTGGAAACACCTTCAGAACATCTCATCCCTCGTTTAAGCAGTCCACTGTGTaGGGGCAGGGGAAGGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: VKISFLIGNTFRTSHPSFKQSTV*GQGKAS Trigger: TGAAGCCTTCCCCTGCCCCAACACAGTGGACTGCTT...AAACGAGGGATGAGATGTTCTGAAGGTGTTTCCAATTAGGAAACTAATCTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR CAA 90 bp | GTTAAGATTAGTTTCCTAATTGGAAACACCTTCAGAACATCTCATCCCTCGTTTACCACCTCCGCCACGTaGAGGATAATGCAGATGCCG | + |
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Preference number: 5 (lower is better) Translates to: VKISFLIGNTFRTSHPSFTTSAT*RIMQMP Trigger: CGGCATCTGCATTATCCTCAACGTGGCGGAGGTGGT...AAACGAGGGATGAGATGTTCTGAAGGTGTTTCCAATTAGGAAACTAATCTTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR CAA 90 bp | GTACCAGACAGCATGGGGGTTAAGATTAGTTTCCTAATTGGAAACACCTTCAGATGCTCGCTCAGCAGCTaGTTGATCTCATTCTGCTTG | + |
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Preference number: 5 (lower is better) Translates to: VPDSMGVKISFLIGNTFRCSLSS*LISFCL Trigger: CAAGCAGAATGAGATCAACAAGCTGCTGAGCGAGCA...TCTGAAGGTGTTTCCAATTAGGAAACTAATCTTAACCCCCATGCTGTCTGGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS-3UTR CAA 90 bp | AAGAGGAAAGGGTATAGGCAGAAAGAATTGCCCACACCATTAATAACCTTGAGCTCGCTCAGCAGCTTGTaGATCTCATTCTGCTTGTAT | + |
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Preference number: 5 (lower is better) Translates to: KRKGYRQKELPTPLITLSSLSSL*ISFCLY Trigger: ATACAAGCAGAATGAGATCAACAAGCTGCTGAGCGA...GCTCAAGGTTATTAATGGTGTGGGCAATTCTTTCTGCCTATACCCTTTCCTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS TCA 72 bp | CCCGAGCCCTTGCGGGAGGGCGGATTGGAGCGGCGCTaGGCACGGCGGGCACAGGCCCGGATGATGAGGTAC | + |
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Preference number: 6 (lower is better) Translates to: PEPLREGGLERR*ARRAQARMMRY Trigger: GTACCTCATCATCCGGGCCTGTGCCCGCCGTGCTCAGCGCCGCTCCAATCCGCCCTCCCGCAAGGGCTCGGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS GCA 72 bp | CGCTCTTTTCAGCGAGCCCGGCCCCTGTGCCAGGGCTaGGGCGCAGTATGTCTTTCAGAGAGCCATCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: RSFQRARPLCQG*GAVCLSESHPA Trigger: AGCAGGATGGCTCTCTGAAAGACATACTGCGCCGCAGCCCTGGCACAGGGGCCGGGCTCGCTGAAAAGAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS GCA 72 bp | AGCATCGGTCGCTCTTTTCAGCGAGCCCGGCCCCTGTaGCAGGGCTGCGGCGCAGTATGTCTTTCAGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: SIGRSFQRARPL*QGCGAVCLSES Trigger: GCTCTCTGAAAGACATACTGCGCCGCAGCCCTGGCACAGGGGCCGGGCTCGCTGAAAAGAGCGACCGATGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS CAA 90 bp | CGGCGGGCACAGGCCCGGATGATGAGGTACACCACCTCCGCCACGTaGAGGATAATGCAGATGCCGGAGGCTGCGAGCATAAAGACAGTG | + |
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Preference number: 6 (lower is better) Translates to: RRAQARMMRYTTSAT*RIMQMPEAASIKTV Trigger: CACTGTCTTTATGCTCGCAGCCTCCGGCATCTGCATTATCCTCAACGTGGCGGAGGTGGTGTACCTCATCATCCGGGCCTGTGCCCGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS CAA 72 bp | CAGGCCCGGATGATGAGGTACACCACCTCCGCCACGTaGAGGATAATGCAGATGCCGGAGGCTGCGAGCATA | + |
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Preference number: 6 (lower is better) Translates to: QARMMRYTTSAT*RIMQMPEAASI Trigger: TATGCTCGCAGCCTCCGGCATCTGCATTATCCTCAACGTGGCGGAGGTGGTGTACCTCATCATCCGGGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS GCA 72 bp | GGGCTGCGGCGCAGTATGTCTTTCAGAGAGCCATCCTaGTCGCTCAGCAGCTTGTTGATCTCATTCTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: GLRRSMSFREPS*SLSSLLISFCL Trigger: CAAGCAGAATGAGATCAACAAGCTGCTGAGCGAGCAGGATGGCTCTCTGAAAGACATACTGCGCCGCAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS TCA 72 bp | TGGCATAGCCGGGGTAGAGCAGATAGAAGACATACATaGAGACAGCCTCGAACAGCAGCCGGAACACCACAC | + |
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Preference number: 6 (lower is better) Translates to: WHSRGRADRRHT*RQPRTAAGTPH Trigger: GTGTGGTGTTCCGGCTGCTGTTCGAGGCTGTCTTCATGTATGTCTTCTATCTGCTCTACCCCGGCTATGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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| CDS GCA 72 bp | TTTCTTTTCTATGTGCTGTTGGTGAGCTACGTGCATTaGCACGAGGAGAGCTGGGGTGGAAACCAAGATAAG | + |
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Preference number: 6 (lower is better) Translates to: FLFYVLLVSYVH*HEESWGGNQDK Trigger: CTTATCTTGGTTTCCACCCCAGCTCTCCTCGTGGCAATGCACGTAGCTCACCAACAGCACATAGAAAAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052130.14 ENSMUST00000119080.8 ENSMUST00000119190.2 |
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