RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for GJA8 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000049908

Ensembl transcript IDs: ENSMUST00000062944.7

Found 253 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAGGGCAGCCTGTGAGGGTCAAGAACACTCTGGGGTCTCAGGCTTaGGATTTGGTTACCGTTCTCATGGTACACGGCAGGGTCTGTGCC +
Preference number: 1 (lower is better)
Translates to: RGQPVRVKNTLGSQA*DLVTVLMVHGRVCA
Trigger: GGCACAGACCCTGCCGTGTACCATGAGAACGGTAACCAAATCCCAAGCCTGAGACCCCAGAGTGTTCTTGACCCTCACAGGCTGCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR TCA 90 bp GAGGGCAGGGATGAGCTACAAAGAGCACAGACACACAGGTACCTCTaGAGGGACCTGACAGGAGCCCAGCGGCAGCTGAAGAAGAGATGT +
Preference number: 1 (lower is better)
Translates to: EGRDELQRAQTHRYL*RDLTGAQRQLKKRC
Trigger: ACATCTCTTCTTCAGCTGCCGCTGGGCTCCTGTCAGGTCCCTTCAGAGGTACCTGTGTGTCTGTGCTCTTTGTAGCTCATCCCTGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR TCA 90 bp GTGGTCTGCACCAGTCTTGCCCATAGCCTTCCCTGGGGCTTCAGCTaGGCAGTTCCTGTGTGCTCAAGTCAGTCTCAGAGGTTGACATAT +
Preference number: 1 (lower is better)
Translates to: VVCTSLAHSLPWGFS*AVPVCSSQSQRLTY
Trigger: ATATGTCAACCTCTGAGACTGACTTGAGCACACAGGAACTGCTCAGCTGAAGCCCCAGGGAAGGCTATGGGCAAGACTGGTGCAGACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 90 bp GGAACGTCACTAGGACAGCGGGTTTACCTTGACAGCGCATACAGGTaGGAGAGGCAGTCCCCTAGTTGTACAGCGTGCATTGTTCTAGAA +
Preference number: 1 (lower is better)
Translates to: GTSLGQRVYLDSAYR*ERQSPSCTACIVLE
Trigger: TTCTAGAACAATGCACGCTGTACAACTAGGGGACTGCCTCTCCCACCTGTATGCGCTGTCAAGGTAAACCCGCTGTCCTAGTGACGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 90 bp GTTCTCTATCCTGTCCTACTGCTGTTGGAGGAAGCTCTCAGGAAGTaGCGTCACAAAGCAGGCTCCAAGTGTGGTAGCCAACTCATGGGT +
Preference number: 1 (lower is better)
Translates to: VLYPVLLLLEEALRK*RHKAGSKCGSQLMG
Trigger: ACCCATGAGTTGGCTACCACACTTGGAGCCTGCTTTGTGACGCCACTTCCTGAGAGCTTCCTCCAACAGCAGTAGGACAGGATAGAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR TCA 90 bp TTTCTGCTGGCAGCTTTTTGGTGCTCATTCTGTCTGAGCAATGCTTaGGAGCTGCCTCCCTCAGGAGAGGCCTATGGGCAGATATCTTCC +
Preference number: 1 (lower is better)
Translates to: FLLAAFWCSFCLSNA*ELPPSGEAYGQISS
Trigger: GGAAGATATCTGCCCATAGGCCTCTCCTGAGGGAGGCAGCTCTCAAGCATTGCTCAGACAGAATGAGCACCAAAAAGCTGCCAGCAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR GCA 90 bp CACATTTCTGCTGGCAGCTTTTTGGTGCTCATTCTGTCTGAGCAATaGTTGAGAGCTGCCTCCCTCAGGAGAGGCCTATGGGCAGATATC +
Preference number: 1 (lower is better)
Translates to: HISAGSFLVLILSEQ*LRAASLRRGLWADI
Trigger: GATATCTGCCCATAGGCCTCTCCTGAGGGAGGCAGCTCTCAAGCATTGCTCAGACAGAATGAGCACCAAAAAGCTGCCAGCAGAAATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR GCA 90 bp ATGAGGAGCAAGCATGACAATAAGCAGTTCCCCCTCTGTGGCTTCTaGATCAGCTCCTGCCTCCTGGTTCCTGCCCTGTTTAAATTGCTG +
Preference number: 1 (lower is better)
Translates to: MRSKHDNKQFPLCGF*ISSCLLVPALFKLL
Trigger: CAGCAATTTAAACAGGGCAGGAACCAGGAGGCAGGAGCTGATGCAGAAGCCACAGAGGGGGAACTGCTTATTGTCATGCTTGCTCCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 90 bp AGGGCTGGTCTGGAGTCAGAGGAAGAAGACTGGAAGAGGATGGAGTaGCATAAGAGCTTCTGTTGGGTTCCTGGCTCATTCTCACCCTTT +
Preference number: 1 (lower is better)
Translates to: RAGLESEEEDWKRME*HKSFCWVPGSFSPF
Trigger: AAAGGGTGAGAATGAGCCAGGAACCCAACAGAAGCTCTTATGCCACTCCATCCTCTTCCAGTCTTCTTCCTCTGACTCCAGACCAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR TCA 90 bp CACTGCCTGGAAGGGGCGGGCTGTTATCCCGCTCTCCATCTTTCATaGCCCTACCTCTCTCTGTCATATTACAGCATGGAAACATTTGCT +
Preference number: 1 (lower is better)
Translates to: HCLEGAGCYPALHLS*PYLSLSYYSMETFA
Trigger: AGCAAATGTTTCCATGCTGTAATATGACAGAGAGAGGTAGGGTCATGAAAGATGGAGAGCGGGATAACAGCCCGCCCCTTCCAGGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 90 bp CATAAAGGGCTGGTCTGGAGTCAGAGGAAGAAGACTGGAAGAGGATaGAGTGGCATAAGAGCTTCTGTTGGGTTCCTGGCTCATTCTCAC +
Preference number: 1 (lower is better)
Translates to: HKGLVWSQRKKTGRG*SGIRASVGFLAHSH
Trigger: GTGAGAATGAGCCAGGAACCCAACAGAAGCTCTTATGCCACTCCATCCTCTTCCAGTCTTCTTCCTCTGACTCCAGACCAGCCCTTTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR TCA 90 bp ATATGCCTTTTTGTTGGGAAGGGCAAAAGGAAATGGCAGGATATGTaGGGCTCCAAGCAGGTGTGGGCAGGGAAGCTAGACACTGCTTCT +
Preference number: 1 (lower is better)
Translates to: ICLFVGKGKRKWQDM*GSKQVWAGKLDTAS
Trigger: AGAAGCAGTGTCTAGCTTCCCTGCCCACACCTGCTTGGAGCCTCACATATCCTGCCATTTCCTTTTGCCCTTCCCAACAAAAAGGCATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR TCA 90 bp AGGTCTTTTTACAAAGCCCCAGTGCTAGGGAGCACCCAAACAACATaGCTGAACCTGATTCTAGGCTTCCTGGTACAGACCTCTCCCGAT +
Preference number: 1 (lower is better)
Translates to: RSFYKAPVLGSTQTT*LNLILGFLVQTSPD
Trigger: ATCGGGAGAGGTCTGTACCAGGAAGCCTAGAATCAGGTTCAGTCATGTTGTTTGGGTGCTCCCTAGCACTGGGGCTTTGTAAAAAGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 90 bp GCGTGCATTGTTCTAGAACAGCATCTATCAAACCAGGGGTGGGGGTaGACCAAGGGACACATAAGACTCAAAGTATATTGGCACCAGCTG +
Preference number: 1 (lower is better)
Translates to: ACIVLEQHLSNQGWG*TKGHIRLKVYWHQL
Trigger: CAGCTGGTGCCAATATACTTTGAGTCTTATGTGTCCCTTGGTCCACCCCCACCCCTGGTTTGATAGATGCTGTTCTAGAACAATGCACGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 90 bp GTGGAGTTACTACCGCTATCAAGCCAATGGCTCCTTCTTTTCCTCTaGGAGGAGCCTCACTCCTGTTCTCTTGATAGCCAAGGCATCTTT +
Preference number: 1 (lower is better)
Translates to: VELLPLSSQWLLLFL*EEPHSCSLDSQGIF
Trigger: AAAGATGCCTTGGCTATCAAGAGAACAGGAGTGAGGCTCCTCCCAGAGGAAAAGAAGGAGCCATTGGCTTGATAGCGGTAGTAACTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 90 bp ACTGAACCTGATTCTAGGCTTCCTGGTACAGACCTCTCCCGATGGTaGAGTTACTACCGCTATCAAGCCAATGGCTCCTTCTTTTCCTCT +
Preference number: 1 (lower is better)
Translates to: TEPDSRLPGTDLSRW*SYYRYQANGSFFSS
Trigger: AGAGGAAAAGAAGGAGCCATTGGCTTGATAGCGGTAGTAACTCCACCATCGGGAGAGGTCTGTACCAGGAAGCCTAGAATCAGGTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 90 bp ATGACTGAACCTGATTCTAGGCTTCCTGGTACAGACCTCTCCCGATaGTGGAGTTACTACCGCTATCAAGCCAATGGCTCCTTCTTTTCC +
Preference number: 1 (lower is better)
Translates to: MTEPDSRLPGTDLSR*WSYYRYQANGSFFS
Trigger: GGAAAAGAAGGAGCCATTGGCTTGATAGCGGTAGTAACTCCACCATCGGGAGAGGTCTGTACCAGGAAGCCTAGAATCAGGTTCAGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR GCA 90 bp GTCCCGTGCCGGGCAGGTGGATGTCTCCTTCTACTCACTGTCCATTaGCTGAAACATTCCTCCACTGAAAGTTTGTTACTTTGGTTTTCT +
Preference number: 1 (lower is better)
Translates to: VPCRAGGCLLLLTVH*LKHSSTESLLLWFS
Trigger: AGAAAACCAAAGTAACAAACTTTCAGTGGAGGAATGTTTCAGGCAATGGACAGTGAGTAGAAGGAGACATCCACCTGCCCGGCACGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 90 bp TGGGCTGAATTCTTTCTGATACAAAGGCTCGATTGCTTTAAACCCTaGGGCACAGTGACCCAACAGAAAGGTGAGCAAGAACTCTGGGCA +
Preference number: 1 (lower is better)
Translates to: WAEFFLIQRLDCFKP*GTVTQQKGEQELWA
Trigger: TGCCCAGAGTTCTTGCTCACCTTTCTGTTGGGTCACTGTGCCCCAGGGTTTAAAGCAATCGAGCCTTTGTATCAGAAAGAATTCAGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 90 bp TTGGAAGTAAAGCTGGACCCAATGGAATCCAGAGCATCATACTCCTaGGTCAGTCATGATTATTTGTCCCCCAAACAGAGGGCAGGGATG +
Preference number: 1 (lower is better)
Translates to: LEVKLDPMESRASYS*VSHDYLSPKQRAGM
Trigger: CATCCCTGCCCTCTGTTTGGGGGACAAATAATCATGACTGACCCAGGAGTATGATGCTCTGGATTCCATTGGGTCCAGCTTTACTTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR TCA 90 bp GCTTCAGCTGAGCAGTTCCTGTGTGCTCAAGTCAGTCTCAGAGGTTaGCATATCCTTCCTTGTCTGTACATGAGCTCTGGTAAGATGAAC +
Preference number: 1 (lower is better)
Translates to: ASAEQFLCAQVSLRG*HILPCLYMSSGKMN
Trigger: GTTCATCTTACCAGAGCTCATGTACAGACAAGGAAGGATATGTCAACCTCTGAGACTGACTTGAGCACACAGGAACTGCTCAGCTGAAGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR GCA 90 bp ACTGGCAGAAGTAGGAAGAAAGTCCCTGTTGTTGGTGCCTGTGTCTaGTTCTTCCAACCTATATGCCTTTTTGTTGGGAAGGGCAAAAGG +
Preference number: 1 (lower is better)
Translates to: TGRSRKKVPVVGACV*FFQPICLFVGKGKR
Trigger: CCTTTTGCCCTTCCCAACAAAAAGGCATATAGGTTGGAAGAAGCAGACACAGGCACCAACAACAGGGACTTTCTTCCTACTTCTGCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR TCA 90 bp CACTTTTTACCTAGGCTGTACCGGCTTTGGCTGGGCAATTGTTTGTaGATGATAGACATAAAGGGCTGGTCTGGAGTCAGAGGAAGAAGA +
Preference number: 1 (lower is better)
Translates to: HFLPRLYRLWLGNCL*MIDIKGWSGVRGRR
Trigger: TCTTCTTCCTCTGACTCCAGACCAGCCCTTTATGTCTATCATTCACAAACAATTGCCCAGCCAAAGCCGGTACAGCCTAGGTAAAAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 90 bp GGACACATAAGACTCAAAGTATATTGGCACCAGCTGGGTTTATCTTaGTCTGTATTGGCTGGAGGTGGGATATCTTTCTTCTGCACCAGG +
Preference number: 1 (lower is better)
Translates to: GHIRLKVYWHQLGLS*SVLAGGGISFFCTR
Trigger: CCTGGTGCAGAAGAAAGATATCCCACCTCCAGCCAATACAGACCAAGATAAACCCAGCTGGTGCCAATATACTTTGAGTCTTATGTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 90 bp TTGGCTGGGCAATTGTTTGTGAATGATAGACATAAAGGGCTGGTCTaGAGTCAGAGGAAGAAGACTGGAAGAGGATGGAGTGGCATAAGA +
Preference number: 1 (lower is better)
Translates to: LAGQLFVNDRHKGLV*SQRKKTGRGWSGIR
Trigger: TCTTATGCCACTCCATCCTCTTCCAGTCTTCTTCCTCTGACTCCAGACCAGCCCTTTATGTCTATCATTCACAAACAATTGCCCAGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR TCA 90 bp GAGAGAAGATTAGGAAAAGGTTATGAGGTAATCATGATTCTGACCTaGTGGGTTTCCATGGAGAATGGAGGAGGAAAGCAAAGCCCCCAT +
Preference number: 1 (lower is better)
Translates to: ERRLGKGYEVIMILT*WVSMENGGGKQSPH
Trigger: ATGGGGGCTTTGCTTTCCTCCTCCATTCTCCATGGAAACCCATCAGGTCAGAATCATGATTACCTCATAACCTTTTCCTAATCTTCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR TCA 90 bp ATGTGGCACCAGGCAATGAGAACTTTCAGAGGGAGGGATAGTTTCTaGAGGCTTATCCAGAGCAAATATGTTAAAATGAAGATGGTAGCC +
Preference number: 1 (lower is better)
Translates to: MWHQAMRTFRGRDSF*RLIQSKYVKMKMVA
Trigger: GGCTACCATCTTCATTTTAACATATTTGCTCTGGATAAGCCTTCAGAAACTATCCCTCCCTCTGAAAGTTCTCATTGCCTGGTGCCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR TCA 90 bp GTTCAGGAGGGACAAGCATTGGTCCTTAAGGAGTACTTTACAATGTaGTCCCTACAGTTTGGACAGCGCCTTCTTTCTTCTCTTTTTCTT +
Preference number: 1 (lower is better)
Translates to: VQEGQALVLKEYFTM*SLQFGQRLLSSLFL
Trigger: AAGAAAAAGAGAAGAAAGAAGGCGCTGTCCAAACTGTAGGGATCACATTGTAAAGTACTCCTTAAGGACCAATGCTTGTCCCTCCTGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR TCA 90 bp GGGCTCATATACCCTATCAACCTAGAGAAAACTGTCATAGAGAGCTaGGAAATGATAACTTGGCATCTCCAGAGTTGGAAAGAAAGAGAC +
Preference number: 1 (lower is better)
Translates to: GLIYPINLEKTVIES*EMITWHLQSWKERD
Trigger: GTCTCTTTCTTTCCAACTCTGGAGATGCCAAGTTATCATTTCTCAGCTCTCTATGACAGTTTTCTCTAGGTTGATAGGGTATATGAGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR TCA 90 bp ACAGAAGGCAAAGGAGCAAGTTCCTTTTATCTTCGGGCAAATTTCTaGATTCTTCTAGAATTTGTGTTCTGCCCTCGAAACTTCCAGAAG +
Preference number: 1 (lower is better)
Translates to: TEGKGASSFYLRANF*ILLEFVFCPRNFQK
Trigger: CTTCTGGAAGTTTCGAGGGCAGAACACAAATTCTAGAAGAATTCAGAAATTTGCCCGAAGATAAAAGGAACTTGCTCCTTTGCCTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR TCA 90 bp TGTTTCATCATAGCAATAGTTACACAAACTAAGACTGTACTTTTATaGTTTTGTGTTGGGCTGCATGCATGGCTATCCTGGGCTGATCAG +
Preference number: 1 (lower is better)
Translates to: CFIIAIVTQTKTVLL*FCVGLHAWLSWADQ
Trigger: CTGATCAGCCCAGGATAGCCATGCATGCAGCCCAACACAAAATCATAAAAGTACAGTCTTAGTTTGTGTAACTATTGCTATGATGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 90 bp AAAATAAAACTAAACCATTCAGTGAGTTTATCTTTGAAACTGTTATaGCTGAGAATGTGGCACCAGGCAATGAGAACTTTCAGAGGGAGG +
Preference number: 1 (lower is better)
Translates to: KIKLNHSVSLSLKLL*LRMWHQAMRTFRGR
Trigger: CCTCCCTCTGAAAGTTCTCATTGCCTGGTGCCACATTCTCAGCCATAACAGTTTCAAAGATAAACTCACTGAATGGTTTAGTTTTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CAA 90 bp TGGGCAGGGAAGCTAGACACTGCTTCTTTCATGCGAGGGAGTAACTaGCTAGCGTCCAGCCAAGGCAAGGAGGCCAGCACCCCTCCCTCA +
Preference number: 2 (lower is better)
Translates to: WAGKLDTASFMRGSN*LASSQGKEASTPPS
Trigger: TGAGGGAGGGGTGCTGGCCTCCTTGCCTTGGCTGGACGCTAGCAAGTTACTCCCTCGCATGAAAGAAGCAGTGTCTAGCTTCCCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CAA 90 bp CCCTTCGTCCCCTCAGGAACTGAAGAATGGTGGTCTGCACCAGTCTaGCCCATAGCCTTCCCTGGGGCTTCAGCTGAGCAGTTCCTGTGT +
Preference number: 2 (lower is better)
Translates to: PFVPSGTEEWWSAPV*PIAFPGASAEQFLC
Trigger: ACACAGGAACTGCTCAGCTGAAGCCCCAGGGAAGGCTATGGGCAAGACTGGTGCAGACCACCATTCTTCAGTTCCTGAGGGGACGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR GCA 90 bp AGCAGTAAGCAGAAAGTCCCGTGCCGGGCAGGTGGATGTCTCCTTCTACTCACTCCCCTCTGTGGCTTCTaGATCAGCTCCTGCCTCCTG +
Preference number: 2 (lower is better)
Translates to: SSKQKVPCRAGGCLLLLTPLCGF*ISSCLL
Trigger: CAGGAGGCAGGAGCTGATGCAGAAGCCACAGAGGGG...AGTGAGTAGAAGGAGACATCCACCTGCCCGGCACGGGACTTTCTGCTTACTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR TCA 90 bp AGCAGTAAGCAGAAAGTCCCGTGCCGGGCAGGTGGATGTCTCCTTCTACTCACTAACCCTGGGGCACAGTaGCCCAACAGAAAGGTGAGC +
Preference number: 2 (lower is better)
Translates to: SSKQKVPCRAGGCLLLLTNPGAQ*PNRKVS
Trigger: GCTCACCTTTCTGTTGGGTCACTGTGCCCCAGGGTT...AGTGAGTAGAAGGAGACATCCACCTGCCCGGCACGGGACTTTCTGCTTACTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CCA 90 bp TTGAAAAATCCCACCCATCCTCCCAGTGTGGCTGCTCATGAGGGTTTCCCAGTGCCCCCACCACCTGTGTaGCCACTGCCAGAGTTGAAT +
Preference number: 2 (lower is better)
Translates to: LKNPTHPPSVAAHEGFPVPPPPV*PLPELN
Trigger: ATTCAACTCTGGCAGTGGCCACACAGGTGGTGGGGG...CACTGGGAAACCCTCATGAGCAGCCACACTGGGAGGATGGGTGGGATTTTTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CAA 90 bp GAGCTGCCTCCCTCAGGAGAGGCCTATGGGCAGATATCTTCCAGTTaGGAACTTGTCCAGCTCCCAGCCTTGGTGAAAGGAGATGCAGAT +
Preference number: 2 (lower is better)
Translates to: ELPPSGEAYGQISSS*ELVQLPALVKGDAD
Trigger: ATCTGCATCTCCTTTCACCAAGGCTGGGAGCTGGACAAGTTCCAAACTGGAAGATATCTGCCCATAGGCCTCTCCTGAGGGAGGCAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CAA 90 bp AAAGATGGCAGCCACCCACCTGTTCTCTATCCTGTCCTACTGCTGTaGGAGGAAGCTCTCAGGAAGTGGCGTCACAAAGCAGGCTCCAAG +
Preference number: 2 (lower is better)
Translates to: KDGSHPPVLYPVLLL*EEALRKWRHKAGSK
Trigger: CTTGGAGCCTGCTTTGTGACGCCACTTCCTGAGAGCTTCCTCCAACAGCAGTAGGACAGGATAGAGAACAGGTGGGTGGCTGCCATCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR TCA 90 bp AAGCTCTCAGGAAGTGGCGTCACAAAGCAGGCTCCAAGTGTGGTAGCCAACTCATGTCTGAGCAATGCTTaGGAGCTGCCTCCCTCAGGA +
Preference number: 2 (lower is better)
Translates to: KLSGSGVTKQAPSVVANSCLSNA*ELPPSG
Trigger: TCCTGAGGGAGGCAGCTCTCAAGCATTGCTCAGACA...TGAGTTGGCTACCACACTTGGAGCCTGCTTTGTGACGCCACTTCCTGAGAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR TCA 90 bp AGCAGTAAGCAGAAAGTCCCGTGCCGGGCAGGTGGATGTCTCCTTCTACTCACTGGTGCTCATTCTGTCTaGGCAATGCTTGAGAGCTGC +
Preference number: 2 (lower is better)
Translates to: SSKQKVPCRAGGCLLLLTGAHSV*AMLESC
Trigger: GCAGCTCTCAAGCATTGCTCAGACAGAATGAGCACC...AGTGAGTAGAAGGAGACATCCACCTGCCCGGCACGGGACTTTCTGCTTACTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR TCA 90 bp AGCAGTAAGCAGAAAGTCCCGTGCCGGGCAGGTGGATGTCTCCTTCTACTCACTGCTCTCCATCTTTCATaGCCCTACCTCTCTCTGTCA +
Preference number: 2 (lower is better)
Translates to: SSKQKVPCRAGGCLLLLTALHLS*PYLSLS
Trigger: TGACAGAGAGAGGTAGGGTCATGAAAGATGGAGAGC...AGTGAGTAGAAGGAGACATCCACCTGCCCGGCACGGGACTTTCTGCTTACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CCA 90 bp TGCTGGCAGGTAGTGAGGCCAATCAAAGGGCAGTTTTGCTGGGTACCCTGGTATGGATACAGCTTGGACTaGGTACTGACTGAGCGTCCA +
Preference number: 2 (lower is better)
Translates to: CWQVVRPIKGQFCWVPWYGYSLD*VLTERP
Trigger: TGGACGCTCAGTCAGTACCCAGTCCAAGCTGTATCC...ATACCAGGGTACCCAGCAAAACTGCCCTTTGATTGGCCTCACTACCTGCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CCA 90 bp TTGAAAAATCCCACCCATCCTCCCAGTGTGGCTGCTCATGAGGGTTTCCCAGTGCTCCTTCTTTTCCTCTaGGAGGAGCCTCACTCCTGT +
Preference number: 2 (lower is better)
Translates to: LKNPTHPPSVAAHEGFPVLLLFL*EEPHSC
Trigger: ACAGGAGTGAGGCTCCTCCCAGAGGAAAAGAAGGAG...CACTGGGAAACCCTCATGAGCAGCCACACTGGGAGGATGGGTGGGATTTTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR GCA 90 bp TTGAAAAATCCCACCCATCCTCCCAGTGTGGCTGCTCATGAGGGTTTCCCAGTGAGGGAAGCTAGACACTaGTTCTTTCATGCGAGGGAG +
Preference number: 2 (lower is better)
Translates to: LKNPTHPPSVAAHEGFPVREARH*FFHARE
Trigger: CTCCCTCGCATGAAAGAAGCAGTGTCTAGCTTCCCT...CACTGGGAAACCCTCATGAGCAGCCACACTGGGAGGATGGGTGGGATTTTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CCA 90 bp TTGAAAAATCCCACCCATCCTCCCAGTGTGGCTGCTCATGAGGGTTTCCCAGTGCCTGATGGGTTTCCATaGAGAATGGAGGAGGAAAGC +
Preference number: 2 (lower is better)
Translates to: LKNPTHPPSVAAHEGFPVPDGFP*RMEEES
Trigger: GCTTTCCTCCTCCATTCTCCATGGAAACCCATCAGG...CACTGGGAAACCCTCATGAGCAGCCACACTGGGAGGATGGGTGGGATTTTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CCA 90 bp TTGAAAAATCCCACCCATCCTCCCAGTGTGGCTGCTCATGAGGGTTTCCCAGTGTCAGCTCCTGCCTCCTaGTTCCTGCCCTGTTTAAAT +
Preference number: 2 (lower is better)
Translates to: LKNPTHPPSVAAHEGFPVSAPAS*FLPCLN
Trigger: ATTTAAACAGGGCAGGAACCAGGAGGCAGGAGCTGA...CACTGGGAAACCCTCATGAGCAGCCACACTGGGAGGATGGGTGGGATTTTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CCA 90 bp TTGAAAAATCCCACCCATCCTCCCAGTGTGGCTGCTCATGAGGGTTTCCCAGTGAGGACTTTCTCACCTTaGGTGATGCTGGCAGGTAGT +
Preference number: 2 (lower is better)
Translates to: LKNPTHPPSVAAHEGFPVRTFSP*VMLAGS
Trigger: ACTACCTGCCAGCATCACCCAAGGTGAGAAAGTCCT...CACTGGGAAACCCTCATGAGCAGCCACACTGGGAGGATGGGTGGGATTTTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CAA 90 bp ATTTCTGCTGGCAGCTTTTTGGTGCTCATTCTGTCTGAGCAATGCTaGAGAGCTGCCTCCCTCAGGAGAGGCCTATGGGCAGATATCTTC +
Preference number: 2 (lower is better)
Translates to: ISAGSFLVLILSEQC*RAASLRRGLWADIF
Trigger: GAAGATATCTGCCCATAGGCCTCTCCTGAGGGAGGCAGCTCTCAAGCATTGCTCAGACAGAATGAGCACCAAAAAGCTGCCAGCAGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR TCA 90 bp AGCAGTAAGCAGAAAGTCCCGTGCCGGGCAGGTGGATGTCTCCTTCTACTCACTGGGCTGAATTCTTTCTaGTACAAAGGCTCGATTGCT +
Preference number: 2 (lower is better)
Translates to: SSKQKVPCRAGGCLLLLTGLNSF*YKGSIA
Trigger: AGCAATCGAGCCTTTGTATCAGAAAGAATTCAGCCC...AGTGAGTAGAAGGAGACATCCACCTGCCCGGCACGGGACTTTCTGCTTACTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR TCA 90 bp GGACCTGACAGGAGCCCAGCGGCAGCTGAAGAAGAGATGTCGTGTAACAATCACGGAGGGATCCTCAATTaGGAAAATGCCTCCATAAGA +
Preference number: 2 (lower is better)
Translates to: GPDRSPAAAEEEMSCNNHGGILN*ENASIR
Trigger: TCTTATGGAGGCATTTTCTCAATTGAGGATCCCTCC...GTGATTGTTACACGACATCTCTTCTTCAGCTGCCGCTGGGCTCCTGTCAGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR GCA 90 bp TCCCTGTTGTTGGTGCCTGTGTCTGCTTCTTCCAACCTATATGCCTTTTTGTTGGCAATGCTTGAGAGCTaGCTCCCTCAGGAGAGGCCT +
Preference number: 2 (lower is better)
Translates to: SLLLVPVSASSNLYAFLLAMLES*LPQERP
Trigger: AGGCCTCTCCTGAGGGAGGCAGCTCTCAAGCATTGC...CAACAAAAAGGCATATAGGTTGGAAGAAGCAGACACAGGCACCAACAACAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR GCA 90 bp TTGAAAAATCCCACCCATCCTCCCAGTGTGGCTGCTCATGAGGGTTTCCCAGTGGTTGGTGCCTGTGTCTaGTTCTTCCAACCTATATGC +
Preference number: 2 (lower is better)
Translates to: LKNPTHPPSVAAHEGFPVVGACV*FFQPIC
Trigger: GCATATAGGTTGGAAGAAGCAGACACAGGCACCAAC...CACTGGGAAACCCTCATGAGCAGCCACACTGGGAGGATGGGTGGGATTTTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CCA 90 bp TCCCTGTTGTTGGTGCCTGTGTCTGCTTCTTCCAACCTATATGCCTTTTTGTTGCTATCAAACCAGGGGTaGGGGTGGACCAAGGGACAC +
Preference number: 2 (lower is better)
Translates to: SLLLVPVSASSNLYAFLLLSNQG*GWTKGH
Trigger: GTGTCCCTTGGTCCACCCCCACCCCTGGTTTGATAG...CAACAAAAAGGCATATAGGTTGGAAGAAGCAGACACAGGCACCAACAACAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CCA 90 bp TTGAAAAATCCCACCCATCCTCCCAGTGTGGCTGCTCATGAGGGTTTCCCAGTGTGGCATCTCCAGAGTTaGAAAGAAAGAGACAGCTGC +
Preference number: 2 (lower is better)
Translates to: LKNPTHPPSVAAHEGFPVWHLQS*KERDSC
Trigger: GCAGCTGTCTCTTTCTTTCCAACTCTGGAGATGCCA...CACTGGGAAACCCTCATGAGCAGCCACACTGGGAGGATGGGTGGGATTTTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CAA 90 bp GGCTTCTGCATCAGCTCCTGCCTCCTGGTTCCTGCCCTGTTTAAATaGCTGTCTGGGTTTCCTTCAGTGATAGATGACAGTGTGGATACA +
Preference number: 2 (lower is better)
Translates to: GFCISSCLLVPALFK*LSGFPSVIDDSVDT
Trigger: TGTATCCACACTGTCATCTATCACTGAAGGAAACCCAGACAGCAATTTAAACAGGGCAGGAACCAGGAGGCAGGAGCTGATGCAGAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CAA 90 bp TGTGTGGTCCGATTCTTAGGCCTTCTGGATCATCCCTCATTTCACTaGCTGTCCCACAGTTCATCTGTCTCTCCGGTTAACAAGCTGTGC +
Preference number: 2 (lower is better)
Translates to: CVVRFLGLLDHPSFH*LSHSSSVSPVNKLC
Trigger: GCACAGCTTGTTAACCGGAGAGACAGATGAACTGTGGGACAGCAAGTGAAATGAGGGATGATCCAGAAGGCCTAAGAATCGGACCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR TCA 90 bp AAGCTCTCAGGAAGTGGCGTCACAAAGCAGGCTCCAAGTGTGGTAGCCAACTCATCACTGTCCATTGCCTaGAACATTCCTCCACTGAAA +
Preference number: 2 (lower is better)
Translates to: KLSGSGVTKQAPSVVANSSLSIA*NIPPLK
Trigger: TTTCAGTGGAGGAATGTTTCAGGCAATGGACAGTGA...TGAGTTGGCTACCACACTTGGAGCCTGCTTTGTGACGCCACTTCCTGAGAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR GCA 90 bp TTGAAAAATCCCACCCATCCTCCCAGTGTGGCTGCTCATGAGGGTTTCCCAGTGAACAAACAAACCAGATaGCCAGGCATCAAGGAAACC +
Preference number: 2 (lower is better)
Translates to: LKNPTHPPSVAAHEGFPVNKQTR*PGIKET
Trigger: GGTTTCCTTGATGCCTGGGCATCTGGTTTGTTTGTT...CACTGGGAAACCCTCATGAGCAGCCACACTGGGAGGATGGGTGGGATTTTTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR GCA 90 bp GGACCTGACAGGAGCCCAGCGGCAGCTGAAGAAGAGATGTCGTGTAACAATCACCAACTTGATATAAGCTaGAGTCATTTGAGAGGAGGG +
Preference number: 2 (lower is better)
Translates to: GPDRSPAAAEEEMSCNNHQLDIS*SHLRGG
Trigger: CCCTCCTCTCAAATGACTGCAGCTTATATCAAGTTG...GTGATTGTTACACGACATCTCTTCTTCAGCTGCCGCTGGGCTCCTGTCAGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CCA 90 bp TCCCTGTTGTTGGTGCCTGTGTCTGCTTCTTCCAACCTATATGCCTTTTTGTTGGTTGGGCTGCATGCATaGCTATCCTGGGCTGATCAG +
Preference number: 2 (lower is better)
Translates to: SLLLVPVSASSNLYAFLLVGLHA*LSWADQ
Trigger: CTGATCAGCCCAGGATAGCCATGCATGCAGCCCAAC...CAACAAAAAGGCATATAGGTTGGAAGAAGCAGACACAGGCACCAACAACAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CCA 90 bp TCCCTGTTGTTGGTGCCTGTGTCTGCTTCTTCCAACCTATATGCCTTTTTGTTGCTCCCTACCCATCCTTaGCATGTGGTCCATGAGGCA +
Preference number: 2 (lower is better)
Translates to: SLLLVPVSASSNLYAFLLLPTHP*HVVHEA
Trigger: TGCCTCATGGACCACATGCCAAGGATGGGTAGGGAG...CAACAAAAAGGCATATAGGTTGGAAGAAGCAGACACAGGCACCAACAACAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CCA 90 bp AGCAGTAAGCAGAAAGTCCCGTGCCGGGCAGGTGGATGTCTCCTTCTACTCACTTCTTTGAAACTGTTATaGCTGAGAATGTGGCACCAG +
Preference number: 2 (lower is better)
Translates to: SSKQKVPCRAGGCLLLLTSLKLL*LRMWHQ
Trigger: CTGGTGCCACATTCTCAGCCATAACAGTTTCAAAGA...AGTGAGTAGAAGGAGACATCCACCTGCCCGGCACGGGACTTTCTGCTTACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CAA 90 bp AATGGCTCCTTCTTTTCCTCTGGGAGGAGCCTCACTCCTGTTCTCTaGATAGCCAAGGCATCTTTAATTGGTAGGACGATGTGCTCTAGG +
Preference number: 2 (lower is better)
Translates to: NGSFFSSGRSLTPVL*IAKASLIGRTMCSR
Trigger: CCTAGAGCACATCGTCCTACCAATTAAAGATGCCTTGGCTATCAAGAGAACAGGAGTGAGGCTCCTCCCAGAGGAAAAGAAGGAGCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR TCA 90 bp CCAACCTATATGCCTTTTTGTTGGGAAGGGCAAAAGGAAATGGCAGGATATGTGATGGCTATCCTGGGCTaGTCAGGAAGCCTCTTGCCA +
Preference number: 2 (lower is better)
Translates to: PTYMPFCWEGQKEMAGYVMAILG*SGSLLP
Trigger: TGGCAAGAGGCTTCCTGATCAGCCCAGGATAGCCAT...CACATATCCTGCCATTTCCTTTTGCCCTTCCCAACAAAAAGGCATATAGGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR GCA 90 bp AAGCTCTCAGGAAGTGGCGTCACAAAGCAGGCTCCAAGTGTGGTAGCCAACTCACCTAGTTGTACAGCGTaGATTGTTCTAGAACAGCAT +
Preference number: 2 (lower is better)
Translates to: KLSGSGVTKQAPSVVANSPSCTA*IVLEQH
Trigger: ATGCTGTTCTAGAACAATGCACGCTGTACAACTAGG...TGAGTTGGCTACCACACTTGGAGCCTGCTTTGTGACGCCACTTCCTGAGAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CCA 90 bp TCCCTGTTGTTGGTGCCTGTGTCTGCTTCTTCCAACCTATATGCCTTTTTGTTGCTGGGGTCTCAGGCTTaGGATTTGGTTACCGTTCTC +
Preference number: 2 (lower is better)
Translates to: SLLLVPVSASSNLYAFLLLGSQA*DLVTVL
Trigger: GAGAACGGTAACCAAATCCCAAGCCTGAGACCCCAG...CAACAAAAAGGCATATAGGTTGGAAGAAGCAGACACAGGCACCAACAACAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR GCA 90 bp TCCCTGTTGTTGGTGCCTGTGTCTGCTTCTTCCAACCTATATGCCTTTTTGTTGCCCCTGTCACATTTCTaGTGGCAGCTTTTTGGTGCT +
Preference number: 2 (lower is better)
Translates to: SLLLVPVSASSNLYAFLLPLSHF*WQLFGA
Trigger: AGCACCAAAAAGCTGCCAGCAGAAATGTGACAGGGG...CAACAAAAAGGCATATAGGTTGGAAGAAGCAGACACAGGCACCAACAACAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR GCA 90 bp AAACCATTCAGTGAGTTTATCTTTGAAACTGTTATGGCTGAGAATGTGGCACCACGTCTGCTGGGGACGTaGTGGGGTACAGAATCTCAC +
Preference number: 2 (lower is better)
Translates to: KPFSEFIFETVMAENVAPRLLGT*WGTESH
Trigger: GTGAGATTCTGTACCCCAGCACGTCCCCAGCAGACG...TGGTGCCACATTCTCAGCCATAACAGTTTCAAAGATAAACTCACTGAATGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CCA 90 bp CCAACCTATATGCCTTTTTGTTGGGAAGGGCAAAAGGAAATGGCAGGATATGTGCTGCTGGCAGCTTTTTaGTGCTCATTCTGTCTGAGC +
Preference number: 2 (lower is better)
Translates to: PTYMPFCWEGQKEMAGYVLLAAF*CSFCLS
Trigger: GCTCAGACAGAATGAGCACCAAAAAGCTGCCAGCAG...CACATATCCTGCCATTTCCTTTTGCCCTTCCCAACAAAAAGGCATATAGGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CCA 90 bp AAACCATTCAGTGAGTTTATCTTTGAAACTGTTATGGCTGAGAATGTGGCACCAGCAGTTCCCCCTCTGTaGCTTCTGCATCAGCTCCTG +
Preference number: 2 (lower is better)
Translates to: KPFSEFIFETVMAENVAPAVPPL*LLHQLL
Trigger: CAGGAGCTGATGCAGAAGCCACAGAGGGGGAACTGC...TGGTGCCACATTCTCAGCCATAACAGTTTCAAAGATAAACTCACTGAATGGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CAA 90 bp TATGGGCAGATATCTTCCAGTTTGGAACTTGTCCAGCTCCCAGCCTaGGTGAAAGGAGATGCAGATTTTAGGTTGACTGATGTTGGAAGA +
Preference number: 2 (lower is better)
Translates to: YGQISSSLELVQLPA*VKGDADFRLTDVGR
Trigger: TCTTCCAACATCAGTCAACCTAAAATCTGCATCTCCTTTCACCAAGGCTGGGAGCTGGACAAGTTCCAAACTGGAAGATATCTGCCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CCA 90 bp CCATCTTTCATGACCCTACCTCTCTCTGTCATATTACAGCATGGAAACATTTGCCTTCCTAACAGCAGTTaGGATAGAAGACCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: PSFMTLPLSVILQHGNICLPNSS*DRRPGQ
Trigger: CTGCCCTGGTCTTCTATCCCAACTGCTGTTAGGAAG...GCAAATGTTTCCATGCTGTAATATGACAGAGAGAGGTAGGGTCATGAAAGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CCA 90 bp CCAACCTATATGCCTTTTTGTTGGGAAGGGCAAAAGGAAATGGCAGGATATGTGTTATGGCTGAGAATGTaGCACCAGGCAATGAGAACT +
Preference number: 2 (lower is better)
Translates to: PTYMPFCWEGQKEMAGYVLWLRM*HQAMRT
Trigger: AGTTCTCATTGCCTGGTGCCACATTCTCAGCCATAA...CACATATCCTGCCATTTCCTTTTGCCCTTCCCAACAAAAAGGCATATAGGTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CAA 90 bp CTTATCCAGAGCAAATATGTTAAAATGAAGATGGTAGCCAGAAGGTaGAAAAGGACTTTCTCACCTTGGGTGATGCTGGCAGGTAGTGAG +
Preference number: 2 (lower is better)
Translates to: LIQSKYVKMKMVARR*KRTFSPWVMLAGSE
Trigger: CTCACTACCTGCCAGCATCACCCAAGGTGAGAAAGTCCTTTTCAACCTTCTGGCTACCATCTTCATTTTAACATATTTGCTCTGGATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CAA 90 bp AACTGTCATAGAGAGCTGAGAAATGATAACTTGGCATCTCCAGAGTaGGAAAGAAAGAGACAGCTGCCACACCTTACAAATGTCAGTGAG +
Preference number: 2 (lower is better)
Translates to: NCHRELRNDNLASPE*ERKRQLPHLTNVSE
Trigger: CTCACTGACATTTGTAAGGTGTGGCAGCTGTCTCTTTCTTTCCAACTCTGGAGATGCCAAGTTATCATTTCTCAGCTCTCTATGACAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR TCA 90 bp CCAACCTATATGCCTTTTTGTTGGGAAGGGCAAAAGGAAATGGCAGGATATGTGTCCTTCAGTGATAGATaGCAGTGTGGATACATAAGC +
Preference number: 2 (lower is better)
Translates to: PTYMPFCWEGQKEMAGYVSFSDR*QCGYIS
Trigger: GCTTATGTATCCACACTGTCATCTATCACTGAAGGA...CACATATCCTGCCATTTCCTTTTGCCCTTCCCAACAAAAAGGCATATAGGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR GCA 90 bp CTCCTTCTACTCACTGTCCATTGCCTGAAACATTCCTCCACTGAAAGTTTGTTAATACAAAGGCTCGATTaGTTTAAACCCTGGGGCACA +
Preference number: 2 (lower is better)
Translates to: LLLLTVHCLKHSSTESLLIQRLD*FKPWGT
Trigger: TGTGCCCCAGGGTTTAAAGCAATCGAGCCTTTGTAT...TAACAAACTTTCAGTGGAGGAATGTTTCAGGCAATGGACAGTGAGTAGAAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR GCA 90 bp CTCCTTCTACTCACTGTCCATTGCCTGAAACATTCCTCCACTGAAAGTTTGTTACTTGTTCTCTCACTGTaGTCTGGGCTGAATTCTTTC +
Preference number: 2 (lower is better)
Translates to: LLLLTVHCLKHSSTESLLLVLSL*SGLNSF
Trigger: GAAAGAATTCAGCCCAGAGCACAGTGAGAGAACAAG...TAACAAACTTTCAGTGGAGGAATGTTTCAGGCAATGGACAGTGAGTAGAAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CCA 90 bp CCATCTTTCATGACCCTACCTCTCTCTGTCATATTACAGCATGGAAACATTTGCTGTATTGGCTGGAGGTaGGATATCTTTCTTCTGCAC +
Preference number: 2 (lower is better)
Translates to: PSFMTLPLSVILQHGNICCIGWR*DIFLLH
Trigger: GTGCAGAAGAAAGATATCCCACCTCCAGCCAATACA...GCAAATGTTTCCATGCTGTAATATGACAGAGAGAGGTAGGGTCATGAAAGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CCA 90 bp AAACCATTCAGTGAGTTTATCTTTGAAACTGTTATGGCTGAGAATGTGGCACCAGGTTTCCATGGAGAATaGAGGAGGAAAGCAAAGCCC +
Preference number: 2 (lower is better)
Translates to: KPFSEFIFETVMAENVAPGFHGE*RRKAKP
Trigger: GGGCTTTGCTTTCCTCCTCCATTCTCCATGGAAACC...TGGTGCCACATTCTCAGCCATAACAGTTTCAAAGATAAACTCACTGAATGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR TCA 90 bp AAACCATTCAGTGAGTTTATCTTTGAAACTGTTATGGCTGAGAATGTGGCACCAAGCTCCCAGCCTTGGTaGAAGGAGATGCAGATTTTA +
Preference number: 2 (lower is better)
Translates to: KPFSEFIFETVMAENVAPSSQPW*KEMQIL
Trigger: TAAAATCTGCATCTCCTTTCACCAAGGCTGGGAGCT...TGGTGCCACATTCTCAGCCATAACAGTTTCAAAGATAAACTCACTGAATGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR TCA 90 bp TCCCTGTTGTTGGTGCCTGTGTCTGCTTCTTCCAACCTATATGCCTTTTTGTTGAAGGTCACCATCGCCTaGTTTTATTCATATCATCTA +
Preference number: 2 (lower is better)
Translates to: SLLLVPVSASSNLYAFLLKVTIA*FYSYHL
Trigger: TAGATGATATGAATAAAATCAGGCGATGGTGACCTT...CAACAAAAAGGCATATAGGTTGGAAGAAGCAGACACAGGCACCAACAACAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR TCA 90 bp CCAACCTATATGCCTTTTTGTTGGGAAGGGCAAAAGGAAATGGCAGGATATGTGCTGGCAACATCACCTTaGAACAGGATTTTGTTCTTT +
Preference number: 2 (lower is better)
Translates to: PTYMPFCWEGQKEMAGYVLATSP*NRILFF
Trigger: AAAGAACAAAATCCTGTTTCAAGGTGATGTTGCCAG...CACATATCCTGCCATTTCCTTTTGCCCTTCCCAACAAAAAGGCATATAGGTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR GCA 90 bp CCAACCTATATGCCTTTTTGTTGGGAAGGGCAAAAGGAAATGGCAGGATATGTGTCCTGTTCAAGTCTCTaGCCTGTTAACTTAGTTTCT +
Preference number: 2 (lower is better)
Translates to: PTYMPFCWEGQKEMAGYVSCSSL*PVNLVS
Trigger: AGAAACTAAGTTAACAGGGCAGAGACTTGAACAGGA...CACATATCCTGCCATTTCCTTTTGCCCTTCCCAACAAAAAGGCATATAGGTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CCA 90 bp CCAACCTATATGCCTTTTTGTTGGGAAGGGCAAAAGGAAATGGCAGGATATGTGAGTTTCAAACACCACTaGCAACATCACCTTGAAACA +
Preference number: 2 (lower is better)
Translates to: PTYMPFCWEGQKEMAGYVSFKHH*QHHLET
Trigger: TGTTTCAAGGTGATGTTGCCAGTGGTGTTTGAAACT...CACATATCCTGCCATTTCCTTTTGCCCTTCCCAACAAAAAGGCATATAGGTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CCA 90 bp CATGACCCTACCTCTCTCTGTCATATTACAGCATGGAAACATTTGCTATTTAAATATCTTGGTCTGTATTaGCTGGAGGTGGGATATCTT +
Preference number: 2 (lower is better)
Translates to: HDPTSLCHITAWKHLLFKYLGLY*LEVGYL
Trigger: AAGATATCCCACCTCCAGCCAATACAGACCAAGATA...TTTAAATAGCAAATGTTTCCATGCTGTAATATGACAGAGAGAGGTAGGGTCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CCA 90 bp AAACCATTCAGTGAGTTTATCTTTGAAACTGTTATGGCTGAGAATGTGGCACCATATATTGGCACCAGCTaGGTTTATCTTGGTCTGTAT +
Preference number: 2 (lower is better)
Translates to: KPFSEFIFETVMAENVAPYIGTS*VYLGLY
Trigger: ATACAGACCAAGATAAACCCAGCTGGTGCCAATATA...TGGTGCCACATTCTCAGCCATAACAGTTTCAAAGATAAACTCACTGAATGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CCA 90 bp AAGGATTTTTGTTGCTTCAGGGAAGAAAACTGCAATTGGCTTGAAAGCCTAAAATCTCTCACTGTGCTCTaGGCTGAATTCTTTCTGATA +
Preference number: 2 (lower is better)
Translates to: KDFCCFREENCNWLESLKSLTVL*AEFFLI
Trigger: TATCAGAAAGAATTCAGCCCAGAGCACAGTGAGAGA...TTTTAGGCTTTCAAGCCAATTGCAGTTTTCTTCCCTGAAGCAACAAAAATCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR TCA 90 bp AAACCATTCAGTGAGTTTATCTTTGAAACTGTTATGGCTGAGAATGTGGCACCAAAGACTGTACTTTTATaGTTTTGTGTTGGGCTGCAT +
Preference number: 2 (lower is better)
Translates to: KPFSEFIFETVMAENVAPKTVLL*FCVGLH
Trigger: ATGCAGCCCAACACAAAATCATAAAAGTACAGTCTT...TGGTGCCACATTCTCAGCCATAACAGTTTCAAAGATAAACTCACTGAATGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR TCA 72 bp CCCTGCCCCCACCACCTGTGTGGCCACTGCCAGAGTTaGATGGCATCTTCTCCTGTCTCTGGGAGCAGCAGT +
Preference number: 3 (lower is better)
Translates to: PCPHHLCGHCQS*MASSPVSGSSS
Trigger: ACTGCTGCTCCCAGAGACAGGAGAAGATGCCATTCAACTCTGGCAGTGGCCACACAGGTGGTGGGGGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 72 bp TGTGTGCCCTTCGTCCCCTCAGGAACTGAAGAATGGTaGTCTGCACCAGTCTTGCCCATAGCCTTCCCTGGG +
Preference number: 3 (lower is better)
Translates to: CVPFVPSGTEEW*SAPVLPIAFPG
Trigger: CCCAGGGAAGGCTATGGGCAAGACTGGTGCAGACCACCATTCTTCAGTTCCTGAGGGGACGAAGGGCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR TCA 72 bp GATGAGCTACAAAGAGCACAGACACACAGGTACCTCTaGAGGGACCTGACAGGAGCCCAGCGGCAGCTGAAG +
Preference number: 3 (lower is better)
Translates to: DELQRAQTHRYL*RDLTGAQRQLK
Trigger: CTTCAGCTGCCGCTGGGCTCCTGTCAGGTCCCTTCAGAGGTACCTGTGTGTCTGTGCTCTTTGTAGCTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR TCA 72 bp ACCAGTCTTGCCCATAGCCTTCCCTGGGGCTTCAGCTaGGCAGTTCCTGTGTGCTCAAGTCAGTCTCAGAGG +
Preference number: 3 (lower is better)
Translates to: TSLAHSLPWGFS*AVPVCSSQSQR
Trigger: CCTCTGAGACTGACTTGAGCACACAGGAACTGCTCAGCTGAAGCCCCAGGGAAGGCTATGGGCAAGACTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR GCA 72 bp CAAACAAACCAGATGCCCAGGCATCAAGGAAACCACTaGCTGGAAGGGGCGGGCTGTTATCCCGCTCTCCAT +
Preference number: 3 (lower is better)
Translates to: QTNQMPRHQGNH*LEGAGCYPALH
Trigger: ATGGAGAGCGGGATAACAGCCCGCCCCTTCCAGGCAGTGGTTTCCTTGATGCCTGGGCATCTGGTTTGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CAA 90 bp GGACCTGACAGGAGCCCAGCGGCAGCTGAAGAAGAGATGTCGTGTAACAATCACCCTGTCCTACTGCTGTaGGAGGAAGCTCTCAGGAAG +
Preference number: 3 (lower is better)
Translates to: GPDRSPAAAEEEMSCNNHPVLLL*EEALRK
Trigger: CTTCCTGAGAGCTTCCTCCAACAGCAGTAGGACAGG...GTGATTGTTACACGACATCTCTTCTTCAGCTGCCGCTGGGCTCCTGTCAGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR TCA 72 bp GCAGCTTTTTGGTGCTCATTCTGTCTGAGCAATGCTTaGGAGCTGCCTCCCTCAGGAGAGGCCTATGGGCAG +
Preference number: 3 (lower is better)
Translates to: AAFWCSFCLSNA*ELPPSGEAYGQ
Trigger: CTGCCCATAGGCCTCTCCTGAGGGAGGCAGCTCTCAAGCATTGCTCAGACAGAATGAGCACCAAAAAGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR GCA 72 bp GCTGGCAGCTTTTTGGTGCTCATTCTGTCTGAGCAATaGTTGAGAGCTGCCTCCCTCAGGAGAGGCCTATGG +
Preference number: 3 (lower is better)
Translates to: AGSFLVLILSEQ*LRAASLRRGLW
Trigger: CCATAGGCCTCTCCTGAGGGAGGCAGCTCTCAAGCATTGCTCAGACAGAATGAGCACCAAAAAGCTGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 72 bp GTTACCGTTCTCATGGTACACGGCAGGGTCTGTGCCTaGATGCTATTGACTGGTGGGGTCAGATTCCAGCAG +
Preference number: 3 (lower is better)
Translates to: VTVLMVHGRVCA*MLLTGGVRFQQ
Trigger: CTGCTGGAATCTGACCCCACCAGTCAATAGCATCCAGGCACAGACCCTGCCGTGTACCATGAGAACGGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 72 bp GGGTCAAGAACACTCTGGGGTCTCAGGCTTGGGATTTaGTTACCGTTCTCATGGTACACGGCAGGGTCTGTG +
Preference number: 3 (lower is better)
Translates to: GSRTLWGLRLGI*LPFSWYTAGSV
Trigger: CACAGACCCTGCCGTGTACCATGAGAACGGTAACCAAATCCCAAGCCTGAGACCCCAGAGTGTTCTTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 72 bp CCTGTGAGGGTCAAGAACACTCTGGGGTCTCAGGCTTaGGATTTGGTTACCGTTCTCATGGTACACGGCAGG +
Preference number: 3 (lower is better)
Translates to: PVRVKNTLGSQA*DLVTVLMVHGR
Trigger: CCTGCCGTGTACCATGAGAACGGTAACCAAATCCCAAGCCTGAGACCCCAGAGTGTTCTTGACCCTCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 72 bp CCTGTCCTACTGCTGTTGGAGGAAGCTCTCAGGAAGTaGCGTCACAAAGCAGGCTCCAAGTGTGGTAGCCAA +
Preference number: 3 (lower is better)
Translates to: PVLLLLEEALRK*RHKAGSKCGSQ
Trigger: TTGGCTACCACACTTGGAGCCTGCTTTGTGACGCCACTTCCTGAGAGCTTCCTCCAACAGCAGTAGGACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CAA 90 bp TTGAAAAATCCCACCCATCCTCCCAGTGTGGCTGCTCATGAGGGTTTCCCAGTGCTTCCAGTTTGGAACTaGTCCAGCTCCCAGCCTTGG +
Preference number: 3 (lower is better)
Translates to: LKNPTHPPSVAAHEGFPVLPVWN*SSSQPW
Trigger: CCAAGGCTGGGAGCTGGACAAGTTCCAAACTGGAAG...CACTGGGAAACCCTCATGAGCAGCCACACTGGGAGGATGGGTGGGATTTTTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR TCA 72 bp CATTTCTGCTGGCAGCTTTTTGGTGCTCATTCTGTCTaGGCAATGCTTGAGAGCTGCCTCCCTCAGGAGAGG +
Preference number: 3 (lower is better)
Translates to: HFCWQLFGAHSV*AMLESCLPQER
Trigger: CCTCTCCTGAGGGAGGCAGCTCTCAAGCATTGCTCAGACAGAATGAGCACCAAAAAGCTGCCAGCAGAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR TCA 72 bp CCTGGGGTCTATAAGCAAGCAAGCTGTGCGAAGCCATaGGGAGCAAGCATGACAATAAGCAGTTCCCCCTCT +
Preference number: 3 (lower is better)
Translates to: PGVYKQASCAKP*GASMTISSSPS
Trigger: AGAGGGGGAACTGCTTATTGTCATGCTTGCTCCTCATGGCTTCGCACAGCTTGCTTGCTTATAGACCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR GCA 72 bp TTCTGTTGGGTTCCTGGCTCATTCTCACCCTTTGTGTaGCCTTCGTCCCCTCAGGAACTGAAGAATGGTGGT +
Preference number: 3 (lower is better)
Translates to: FCWVPGSFSPFV*PSSPQELKNGG
Trigger: ACCACCATTCTTCAGTTCCTGAGGGGACGAAGGGCACACAAAGGGTGAGAATGAGCCAGGAACCCAACAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 72 bp CAATGCTTGAGAGCTGCCTCCCTCAGGAGAGGCCTATaGGCAGATATCTTCCAGTTTGGAACTTGTCCAGCT +
Preference number: 3 (lower is better)
Translates to: QCLRAASLRRGL*ADIFQFGTCPA
Trigger: AGCTGGACAAGTTCCAAACTGGAAGATATCTGCCCATAGGCCTCTCCTGAGGGAGGCAGCTCTCAAGCATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 72 bp CTGGTCTGGAGTCAGAGGAAGAAGACTGGAAGAGGATaGAGTGGCATAAGAGCTTCTGTTGGGTTCCTGGCT +
Preference number: 3 (lower is better)
Translates to: LVWSQRKKTGRG*SGIRASVGFLA
Trigger: AGCCAGGAACCCAACAGAAGCTCTTATGCCACTCCATCCTCTTCCAGTCTTCTTCCTCTGACTCCAGACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CAA 90 bp TTGAAAAATCCCACCCATCCTCCCAGTGTGGCTGCTCATGAGGGTTTCCCAGTGCAGATATCTTCCAGTTaGGAACTTGTCCAGCTCCCA +
Preference number: 3 (lower is better)
Translates to: LKNPTHPPSVAAHEGFPVQISSS*ELVQLP
Trigger: TGGGAGCTGGACAAGTTCCAAACTGGAAGATATCTG...CACTGGGAAACCCTCATGAGCAGCCACACTGGGAGGATGGGTGGGATTTTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CAA 90 bp TTGAAAAATCCCACCCATCCTCCCAGTGTGGCTGCTCATGAGGGTTTCCCAGTGCCTGCCCTGTTTAAATaGCTGTCTGGGTTTCCTTCA +
Preference number: 3 (lower is better)
Translates to: LKNPTHPPSVAAHEGFPVPALFK*LSGFPS
Trigger: TGAAGGAAACCCAGACAGCAATTTAAACAGGGCAGG...CACTGGGAAACCCTCATGAGCAGCCACACTGGGAGGATGGGTGGGATTTTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR TCA 72 bp TACAAAGCCCCAGTGCTAGGGAGCACCCAAACAACATaGCTGAACCTGATTCTAGGCTTCCTGGTACAGACC +
Preference number: 3 (lower is better)
Translates to: YKAPVLGSTQTT*LNLILGFLVQT
Trigger: GGTCTGTACCAGGAAGCCTAGAATCAGGTTCAGTCATGTTGTTTGGGTGCTCCCTAGCACTGGGGCTTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR TCA 72 bp GAAAAATCCCACCCATCCTCCCAGTGTGGCTGCTCATaGGGGTTTCCCAGTGATGCTAACTTTGAGTGCATC +
Preference number: 3 (lower is better)
Translates to: EKSHPSSQCGCS*GFPSDANFECI
Trigger: GATGCACTCAAAGTTAGCATCACTGGGAAACCCTCATGAGCAGCCACACTGGGAGGATGGGTGGGATTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR GCA 72 bp TACAGGTGGGAGAGGCAGTCCCCTAGTTGTACAGCGTaGATTGTTCTAGAACAGCATCTATCAAACCAGGGG +
Preference number: 3 (lower is better)
Translates to: YRWERQSPSCTA*IVLEQHLSNQG
Trigger: CCCCTGGTTTGATAGATGCTGTTCTAGAACAATGCACGCTGTACAACTAGGGGACTGCCTCTCCCACCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 72 bp CTACCGCTATCAAGCCAATGGCTCCTTCTTTTCCTCTaGGAGGAGCCTCACTCCTGTTCTCTTGATAGCCAA +
Preference number: 3 (lower is better)
Translates to: LPLSSQWLLLFL*EEPHSCSLDSQ
Trigger: TTGGCTATCAAGAGAACAGGAGTGAGGCTCCTCCCAGAGGAAAAGAAGGAGCCATTGGCTTGATAGCGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 72 bp ATGGTAGCCAGAAGGTTGAAAAGGACTTTCTCACCTTaGGTGATGCTGGCAGGTAGTGAGGCCAATCAAAGG +
Preference number: 3 (lower is better)
Translates to: MVARRLKRTFSP*VMLAGSEANQR
Trigger: CCTTTGATTGGCCTCACTACCTGCCAGCATCACCCAAGGTGAGAAAGTCCTTTTCAACCTTCTGGCTACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CAA 90 bp AGCAGTAAGCAGAAAGTCCCGTGCCGGGCAGGTGGATGTCTCCTTCTACTCACTTTTTATGATTTTGTGTaGGGCTGCATGCATGGCTAT +
Preference number: 3 (lower is better)
Translates to: SSKQKVPCRAGGCLLLLTFYDFV*GCMHGY
Trigger: ATAGCCATGCATGCAGCCCAACACAAAATCATAAAA...AGTGAGTAGAAGGAGACATCCACCTGCCCGGCACGGGACTTTCTGCTTACTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CAA 90 bp GGACCTGACAGGAGCCCAGCGGCAGCTGAAGAAGAGATGTCGTGTAACAATCACTGTACTTTTATGATTTaGTGTTGGGCTGCATGCATG +
Preference number: 3 (lower is better)
Translates to: GPDRSPAAAEEEMSCNNHCTFMI*CWAACM
Trigger: CATGCATGCAGCCCAACACAAAATCATAAAAGTACA...GTGATTGTTACACGACATCTCTTCTTCAGCTGCCGCTGGGCTCCTGTCAGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR TCA 72 bp AATGGAATCCAGAGCATCATACTCCTGGGTCAGTCATaGTTATTTGTCCCCCAAACAGAGGGCAGGGATGAG +
Preference number: 3 (lower is better)
Translates to: NGIQSIILLGQS*LFVPQTEGRDE
Trigger: CTCATCCCTGCCCTCTGTTTGGGGGACAAATAATCATGACTGACCCAGGAGTATGATGCTCTGGATTCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR TCA 72 bp GAGCAGTTCCTGTGTGCTCAAGTCAGTCTCAGAGGTTaGCATATCCTTCCTTGTCTGTACATGAGCTCTGGT +
Preference number: 3 (lower is better)
Translates to: EQFLCAQVSLRG*HILPCLYMSSG
Trigger: ACCAGAGCTCATGTACAGACAAGGAAGGATATGTCAACCTCTGAGACTGACTTGAGCACACAGGAACTGCTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 72 bp AAGCTGGACCCAATGGAATCCAGAGCATCATACTCCTaGGTCAGTCATGATTATTTGTCCCCCAAACAGAGG +
Preference number: 3 (lower is better)
Translates to: KLDPMESRASYS*VSHDYLSPKQR
Trigger: CCTCTGTTTGGGGGACAAATAATCATGACTGACCCAGGAGTATGATGCTCTGGATTCCATTGGGTCCAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CAA 90 bp TTGAAAAATCCCACCCATCCTCCCAGTGTGGCTGCTCATGAGGGTTTCCCAGTGCTATATGCCTTTTTGTaGGGAAGGGCAAAAGGAAAT +
Preference number: 3 (lower is better)
Translates to: LKNPTHPPSVAAHEGFPVLYAFL*GRAKGN
Trigger: ATTTCCTTTTGCCCTTCCCAACAAAAAGGCATATAG...CACTGGGAAACCCTCATGAGCAGCCACACTGGGAGGATGGGTGGGATTTTTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR TCA 72 bp CTTGTTCTCTCACTGTGCTCTGGGCTGAATTCTTTCTaGTACAAAGGCTCGATTGCTTTAAACCCTGGGGCA +
Preference number: 3 (lower is better)
Translates to: LVLSLCSGLNSF*YKGSIALNPGA
Trigger: TGCCCCAGGGTTTAAAGCAATCGAGCCTTTGTATCAGAAAGAATTCAGCCCAGAGCACAGTGAGAGAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR GCA 72 bp GTTTTGCTGGGTACCCTGGTATCCTGTTCAAGTCTCTaGCCTGTTAACTTAGTTTCTCTACTCCCTACCCAT +
Preference number: 3 (lower is better)
Translates to: VLLGTLVSCSSL*PVNLVSLLPTH
Trigger: ATGGGTAGGGAGTAGAGAAACTAAGTTAACAGGGCAGAGACTTGAACAGGATACCAGGGTACCCAGCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR GCA 72 bp CGGGCAGGTGGATGTCTCCTTCTACTCACTGTCCATTaGCTGAAACATTCCTCCACTGAAAGTTTGTTACTT +
Preference number: 3 (lower is better)
Translates to: RAGGCLLLLTVH*LKHSSTESLLL
Trigger: AAGTAACAAACTTTCAGTGGAGGAATGTTTCAGGCAATGGACAGTGAGTAGAAGGAGACATCCACCTGCCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 72 bp GGGTGGACCAAGGGACACATAAGACTCAAAGTATATTaGCACCAGCTGGGTTTATCTTGGTCTGTATTGGCT +
Preference number: 3 (lower is better)
Translates to: GWTKGHIRLKVY*HQLGLSWSVLA
Trigger: AGCCAATACAGACCAAGATAAACCCAGCTGGTGCCAATATACTTTGAGTCTTATGTGTCCCTTGGTCCACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 72 bp GTTCTAGAACAGCATCTATCAAACCAGGGGTGGGGGTaGACCAAGGGACACATAAGACTCAAAGTATATTGG +
Preference number: 3 (lower is better)
Translates to: VLEQHLSNQGWG*TKGHIRLKVYW
Trigger: CCAATATACTTTGAGTCTTATGTGTCCCTTGGTCCACCCCCACCCCTGGTTTGATAGATGCTGTTCTAGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 72 bp TGCATTGTTCTAGAACAGCATCTATCAAACCAGGGGTaGGGGTGGACCAAGGGACACATAAGACTCAAAGTA +
Preference number: 3 (lower is better)
Translates to: CIVLEQHLSNQG*GWTKGHIRLKV
Trigger: TACTTTGAGTCTTATGTGTCCCTTGGTCCACCCCCACCCCTGGTTTGATAGATGCTGTTCTAGAACAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CAA 90 bp CTCCTTCTACTCACTGTCCATTGCCTGAAACATTCCTCCACTGAAAGTTTGTTATCTGCTGGCAGCTTTTaGGTGCTCATTCTGTCTGAG +
Preference number: 3 (lower is better)
Translates to: LLLLTVHCLKHSSTESLLSAGSF*VLILSE
Trigger: CTCAGACAGAATGAGCACCAAAAAGCTGCCAGCAGA...TAACAAACTTTCAGTGGAGGAATGTTTCAGGCAATGGACAGTGAGTAGAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CAA 90 bp CCAACCTATATGCCTTTTTGTTGGGAAGGGCAAAAGGAAATGGCAGGATATGTGTCTACTCACTGTCCATaGCCTGAAACATTCCTCCAC +
Preference number: 3 (lower is better)
Translates to: PTYMPFCWEGQKEMAGYVSTHCP*PETFLH
Trigger: GTGGAGGAATGTTTCAGGCAATGGACAGTGAGTAGA...CACATATCCTGCCATTTCCTTTTGCCCTTCCCAACAAAAAGGCATATAGGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 72 bp TTCTTTCTGATACAAAGGCTCGATTGCTTTAAACCCTaGGGCACAGTGACCCAACAGAAAGGTGAGCAAGAA +
Preference number: 3 (lower is better)
Translates to: FFLIQRLDCFKP*GTVTQQKGEQE
Trigger: TTCTTGCTCACCTTTCTGTTGGGTCACTGTGCCCCAGGGTTTAAAGCAATCGAGCCTTTGTATCAGAAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 72 bp CTGTGTCTGCTTCTTCCAACCTATATGCCTTTTTGTTaGGAAGGGCAAAAGGAAATGGCAGGATATGTGAGG +
Preference number: 3 (lower is better)
Translates to: LCLLLPTYMPFC*EGQKEMAGYVR
Trigger: CCTCACATATCCTGCCATTTCCTTTTGCCCTTCCCAACAAAAAGGCATATAGGTTGGAAGAAGCAGACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 72 bp GATGAACCCCTTAGCATCACTTGCAACAGATTCTCATaGGATGAAAGCTGTTCTTGTGTGTGGTCCGATTCT +
Preference number: 3 (lower is better)
Translates to: DEPLSITCNRFS*DESCSCVWSDS
Trigger: AGAATCGGACCACACACAAGAACAGCTTTCATCCCATGAGAATCTGTTGCAAGTGATGCTAAGGGGTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CAA 90 bp CCAACCTATATGCCTTTTTGTTGGGAAGGGCAAAAGGAAATGGCAGGATATGTGAGGAGGGATCCTCAATaGAGAAAATGCCTCCATAAG +
Preference number: 3 (lower is better)
Translates to: PTYMPFCWEGQKEMAGYVRRDPQ*RKCLHK
Trigger: CTTATGGAGGCATTTTCTCAATTGAGGATCCCTCCT...CACATATCCTGCCATTTCCTTTTGCCCTTCCCAACAAAAAGGCATATAGGTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 72 bp AGACTCAAAGTATATTGGCACCAGCTGGGTTTATCTTaGTCTGTATTGGCTGGAGGTGGGATATCTTTCTTC +
Preference number: 3 (lower is better)
Translates to: RLKVYWHQLGLS*SVLAGGGISFF
Trigger: GAAGAAAGATATCCCACCTCCAGCCAATACAGACCAAGATAAACCCAGCTGGTGCCAATATACTTTGAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 72 bp GTGAGTTTATCTTTGAAACTGTTATGGCTGAGAATGTaGCACCAGGCAATGAGAACTTTCAGAGGGAGGGAT +
Preference number: 3 (lower is better)
Translates to: VSLSLKLLWLRM*HQAMRTFRGRD
Trigger: ATCCCTCCCTCTGAAAGTTCTCATTGCCTGGTGCCACATTCTCAGCCATAACAGTTTCAAAGATAAACTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CAA 90 bp CTCCTTCTACTCACTGTCCATTGCCTGAAACATTCCTCCACTGAAAGTTTGTTAGGGTCCTATAGGCTTTaGAGTTTGAGATCTCTCATG +
Preference number: 3 (lower is better)
Translates to: LLLLTVHCLKHSSTESLLGSYRL*SLRSLM
Trigger: CATGAGAGATCTCAAACTCAAAAGCCTATAGGACCC...TAACAAACTTTCAGTGGAGGAATGTTTCAGGCAATGGACAGTGAGTAGAAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CAA 90 bp CTCCTTCTACTCACTGTCCATTGCCTGAAACATTCCTCCACTGAAAGTTTGTTAATAAGCTGCAGTCATTaGAGAGGAGGGATCCTCAAT +
Preference number: 3 (lower is better)
Translates to: LLLLTVHCLKHSSTESLLISCSH*RGGILN
Trigger: ATTGAGGATCCCTCCTCTCAAATGACTGCAGCTTAT...TAACAAACTTTCAGTGGAGGAATGTTTCAGGCAATGGACAGTGAGTAGAAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 72 bp CCCAACAGAAAGGTGAGCAAGAACTCTGGGCATCTCTaGACTGATGACTTAAGACATTTCAAAGTGATAAGA +
Preference number: 3 (lower is better)
Translates to: PNRKVSKNSGHL*TDDLRHFKVIR
Trigger: TCTTATCACTTTGAAATGTCTTAAGTCATCAGTCCAGAGATGCCCAGAGTTCTTGCTCACCTTTCTGTTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 72 bp CTCCCTCACAGCTCTGCAACTAGTTTCAAACACCACTaGCAACATCACCTTGAAACAGGATTTTGTTCTTTT +
Preference number: 3 (lower is better)
Translates to: LPHSSATSFKHH*QHHLETGFCSF
Trigger: AAAAGAACAAAATCCTGTTTCAAGGTGATGTTGCCAGTGGTGTTTGAAACTAGTTGCAGAGCTGTGAGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR GCA 72 bp CTACCTCTCTCTGTCATATTACAGCATGGAAACATTTaGTATTTAAATCACTGGCCTGGGTCCTATAGGCTT +
Preference number: 3 (lower is better)
Translates to: LPLSVILQHGNI*YLNHWPGSYRL
Trigger: AAGCCTATAGGACCCAGGCCAGTGATTTAAATAGCAAATGTTTCCATGCTGTAATATGACAGAGAGAGGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CAA 90 bp CTCCTTCTACTCACTGTCCATTGCCTGAAACATTCCTCCACTGAAAGTTTGTTATCCCTAGCTTGCTTTTaGATCATGGTGTTTCATCAT +
Preference number: 3 (lower is better)
Translates to: LLLLTVHCLKHSSTESLLSLACF*IMVFHH
Trigger: ATGATGAAACACCATGATCAAAAAGCAAGCTAGGGA...TAACAAACTTTCAGTGGAGGAATGTTTCAGGCAATGGACAGTGAGTAGAAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR-3UTR CAA 90 bp CCAACCTATATGCCTTTTTGTTGGGAAGGGCAAAAGGAAATGGCAGGATATGTGTCCTCCACTGAAAGTTaGTTACTTTGGTTTTCTAGA +
Preference number: 3 (lower is better)
Translates to: PTYMPFCWEGQKEMAGYVSSTES*LLWFSR
Trigger: TCTAGAAAACCAAAGTAACAAACTTTCAGTGGAGGA...CACATATCCTGCCATTTCCTTTTGCCCTTCCCAACAAAAAGGCATATAGGTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR TCA 72 bp CAGGCAATGAGAACTTTCAGAGGGAGGGATAGTTTCTaGAGGCTTATCCAGAGCAAATATGTTAAAATGAAG +
Preference number: 3 (lower is better)
Translates to: QAMRTFRGRDSF*RLIQSKYVKMK
Trigger: CTTCATTTTAACATATTTGCTCTGGATAAGCCTTCAGAAACTATCCCTCCCTCTGAAAGTTCTCATTGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR TCA 72 bp TACCCTATCAACCTAGAGAAAACTGTCATAGAGAGCTaGGAAATGATAACTTGGCATCTCCAGAGTTGGAAA +
Preference number: 3 (lower is better)
Translates to: YPINLEKTVIES*EMITWHLQSWK
Trigger: TTTCCAACTCTGGAGATGCCAAGTTATCATTTCTCAGCTCTCTATGACAGTTTTCTCTAGGTTGATAGGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CCA 72 bp CTAAACCATTCAGTGAGTTTATCTTTGAAACTGTTATaGCTGAGAATGTGGCACCAGGCAATGAGAACTTTC +
Preference number: 3 (lower is better)
Translates to: LNHSVSLSLKLL*LRMWHQAMRTF
Trigger: GAAAGTTCTCATTGCCTGGTGCCACATTCTCAGCCATAACAGTTTCAAAGATAAACTCACTGAATGGTTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR TCA 72 bp ATAGCAATAGTTACACAAACTAAGACTGTACTTTTATaGTTTTGTGTTGGGCTGCATGCATGGCTATCCTGG +
Preference number: 3 (lower is better)
Translates to: IAIVTQTKTVLL*FCVGLHAWLSW
Trigger: CCAGGATAGCCATGCATGCAGCCCAACACAAAATCATAAAAGTACAGTCTTAGTTTGTGTAACTATTGCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CAA 72 bp ACCCTGCCCCCACCACCTGTGTGGCCACTGCCAGAGTaGAATGGCATCTTCTCCTGTCTCTGGGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TLPPPPVWPLPE*NGIFSCLWEQQ
Trigger: CTGCTGCTCCCAGAGACAGGAGAAGATGCCATTCAACTCTGGCAGTGGCCACACAGGTGGTGGGGGCAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR CCA 90 bp GGACCTGACAGGAGCCCAGCGGCAGCTGAAGAAGAGATGTCGTGTAACAATCACAGCAGTCTACCACATTaGGGCAGGGCCACCGGCTGC +
Preference number: 4 (lower is better)
Translates to: GPDRSPAAAEEEMSCNNHSSLPH*GRATGC
Trigger: GCAGCCGGTGGCCCTGCCCCAATGTGGTAGACTGCT...GTGATTGTTACACGACATCTCTTCTTCAGCTGCCGCTGGGCTCCTGTCAGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR GCA 90 bp GGACCTGACAGGAGCCCAGCGGCAGCTGAAGAAGAGATGTCGTGTAACAATCACCTGACCTGGCCCTGCTaGTGGCTTTACTCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: GPDRSPAAAEEEMSCNNHLTWPC*WLYSAC
Trigger: GCAGGCTGAGTAAAGCCAGCAGCAGGGCCAGGTCAG...GTGATTGTTACACGACATCTCTTCTTCAGCTGCCGCTGGGCTCCTGTCAGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CAA 72 bp CCCTCAGGAACTGAAGAATGGTGGTCTGCACCAGTCTaGCCCATAGCCTTCCCTGGGGCTTCAGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: PSGTEEWWSAPV*PIAFPGASAEQ
Trigger: CTGCTCAGCTGAAGCCCCAGGGAAGGCTATGGGCAAGACTGGTGCAGACCACCATTCTTCAGTTCCTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR GCA 90 bp AGCAGTAAGCAGAAAGTCCCGTGCCGGGCAGGTGGATGTCTCCTTCTACTCACTACGTGGTGTACCGCGTaGCCCACGTACATCAGCGAT +
Preference number: 4 (lower is better)
Translates to: SSKQKVPCRAGGCLLLLTTWCTA*PTYISD
Trigger: ATCGCTGATGTACGTGGGGCACGCGGTACACCACGT...AGTGAGTAGAAGGAGACATCCACCTGCCCGGCACGGGACTTTCTGCTTACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR CCA 90 bp GGACCTGACAGGAGCCCAGCGGCAGCTGAAGAAGAGATGTCGTGTAACAATCACTGTCTCCTGCCCTTCTaGGGCCACCTTCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GPDRSPAAAEEEMSCNNHCLLPF*GHLLCF
Trigger: GAAGCAGAGAAGGTGGCCCCAGAAGGGCAGGAGACA...GTGATTGTTACACGACATCTCTTCTTCAGCTGCCGCTGGGCTCCTGTCAGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR TCA 90 bp TGCTGGCAGGTAGTGAGGCCAATCAAAGGGCAGTTTTGCTGGGTACCCTGGTATTATGGTGAGATCATCTaGCCTGGCCCTGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: CWQVVRPIKGQFCWVPWYYGEII*PGPAAG
Trigger: GCCAGCAGCAGGGCCAGGTCAGATGATCTCACCATA...ATACCAGGGTACCCAGCAAAACTGCCCTTTGATTGGCCTCACTACCTGCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR CCA 90 bp GGACCTGACAGGAGCCCAGCGGCAGCTGAAGAAGAGATGTCGTGTAACAATCACTGGCCGAAAGAGGGCTaGTCTCCACCATTCCAACCT +
Preference number: 4 (lower is better)
Translates to: GPDRSPAAAEEEMSCNNHWPKEG*SPPFQP
Trigger: AGGTTGGAATGGTGGAGACCAGCCCTCTTTCGGCCA...GTGATTGTTACACGACATCTCTTCTTCAGCTGCCGCTGGGCTCCTGTCAGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR CCA 90 bp TTGAAAAATCCCACCCATCCTCCCAGTGTGGCTGCTCATGAGGGTTTCCCAGTGACCTGGCCCTGCTGCTaGCTTTACTCAGCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LKNPTHPPSVAAHEGFPVTWPCC*LYSACS
Trigger: TGAGCAGGCTGAGTAAAGCCAGCAGCAGGGCCAGGT...CACTGGGAAACCCTCATGAGCAGCCACACTGGGAGGATGGGTGGGATTTTTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CAA 72 bp GGCAGCTTTTTGGTGCTCATTCTGTCTGAGCAATGCTaGAGAGCTGCCTCCCTCAGGAGAGGCCTATGGGCA +
Preference number: 4 (lower is better)
Translates to: GSFLVLILSEQC*RAASLRRGLWA
Trigger: TGCCCATAGGCCTCTCCTGAGGGAGGCAGCTCTCAAGCATTGCTCAGACAGAATGAGCACCAAAAAGCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CAA 72 bp AAGCTAGACACTGCTTCTTTCATGCGAGGGAGTAACTaGCTAGCGTCCAGCCAAGGCAAGGAGGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: KLDTASFMRGSN*LASSQGKEAST
Trigger: GGTGCTGGCCTCCTTGCCTTGGCTGGACGCTAGCAAGTTACTCCCTCGCATGAAAGAAGCAGTGTCTAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR TCA 90 bp AAGCTCTCAGGAAGTGGCGTCACAAAGCAGGCTCCAAGTGTGGTAGCCAACTCAGCTCTACAGGCCTCTTaGAGGCAGACCGGATTCCTT +
Preference number: 4 (lower is better)
Translates to: KLSGSGVTKQAPSVVANSALQAS*RQTGFL
Trigger: AAGGAATCCGGTCTGCCTTCAAGAGGCCTGTAGAGC...TGAGTTGGCTACCACACTTGGAGCCTGCTTTGTGACGCCACTTCCTGAGAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR GCA 90 bp TTGAAAAATCCCACCCATCCTCCCAGTGTGGCTGCTCATGAGGGTTTCCCAGTGGCCGGAACTTCTTGGTaGCTTTGCTACTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LKNPTHPPSVAAHEGFPVAGTSW*LCYCCC
Trigger: GCAGCAGCAGTAGCAAAGGCACCAAGAAGTTCCGGC...CACTGGGAAACCCTCATGAGCAGCCACACTGGGAGGATGGGTGGGATTTTTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR GCA 90 bp TTGAAAAATCCCACCCATCCTCCCAGTGTGGCTGCTCATGAGGGTTTCCCAGTGAGGTCCTTAGCAGTGTaGCCTCCAGCCGGAACTTCT +
Preference number: 4 (lower is better)
Translates to: LKNPTHPPSVAAHEGFPVRSLAV*PPAGTS
Trigger: AGAAGTTCCGGCTGGAGGGCACACTGCTAAGGACCT...CACTGGGAAACCCTCATGAGCAGCCACACTGGGAGGATGGGTGGGATTTTTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CAA 72 bp CCCTCAGGAGAGGCCTATGGGCAGATATCTTCCAGTTaGGAACTTGTCCAGCTCCCAGCCTTGGTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: PSGEAYGQISSS*ELVQLPALVKG
Trigger: TCCTTTCACCAAGGCTGGGAGCTGGACAAGTTCCAAACTGGAAGATATCTGCCCATAGGCCTCTCCTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CAA 72 bp AGGGTCAAGAACACTCTGGGGTCTCAGGCTTGGGATTaGGTTACCGTTCTCATGGTACACGGCAGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: RVKNTLGSQAWD*VTVLMVHGRVC
Trigger: ACAGACCCTGCCGTGTACCATGAGAACGGTAACCAAATCCCAAGCCTGAGACCCCAGAGTGTTCTTGACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR GCA 90 bp AGCAGTAAGCAGAAAGTCCCGTGCCGGGCAGGTGGATGTCTCCTTCTACTCACTCCGATGACAGTGGAGTaGTCATTCACCTCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: SSKQKVPCRAGGCLLLLTPMTVE*SFTSSK
Trigger: CTTGGAAGAGGTGAATGAGCACTCCACTGTCATCGG...AGTGAGTAGAAGGAGACATCCACCTGCCCGGCACGGGACTTTCTGCTTACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR GCA 90 bp AGCAGTAAGCAGAAAGTCCCGTGCCGGGCAGGTGGATGTCTCCTTCTACTCACTGATAGAGGGGCAGGATaGGGAAACCATACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: SSKQKVPCRAGGCLLLLTDRGAG*GNHTGS
Trigger: ACTTCCTGTATGGTTTCCGCATCCTGCCCCTCTATC...AGTGAGTAGAAGGAGACATCCACCTGCCCGGCACGGGACTTTCTGCTTACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR GCA 90 bp CCATCTTTCATGACCCTACCTCTCTCTGTCATATTACAGCATGGAAACATTTGCGGCAGGGCCACCGGCTaGAGCGATAGAGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PSFMTLPLSVILQHGNICGRATG*SDRGAG
Trigger: TCCTGCCCCTCTATCGCTGCAGCCGGTGGCCCTGCC...GCAAATGTTTCCATGCTGTAATATGACAGAGAGAGGTAGGGTCATGAAAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR CCA 90 bp TCCCTGTTGTTGGTGCCTGTGTCTGCTTCTTCCAACCTATATGCCTTTTTGTTGTCCTCCATGCGAACGTaGTGTACCGCGTGCCCCACG +
Preference number: 4 (lower is better)
Translates to: SLLLVPVSASSNLYAFLLSSMRT*CTACPT
Trigger: CGTGGGGCACGCGGTACACCACGTTCGCATGGAGGA...CAACAAAAAGGCATATAGGTTGGAAGAAGCAGACACAGGCACCAACAACAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR CCA 90 bp AGCAGTAAGCAGAAAGTCCCGTGCCGGGCAGGTGGATGTCTCCTTCTACTCACTCCTTTCATGCCCAGGTaGCTCATCTCCATGATGTTG +
Preference number: 4 (lower is better)
Translates to: SSKQKVPCRAGGCLLLLTPFMPR*LISMML
Trigger: CAACATCATGGAGATGAGCCACCTGGGCATGAAAGG...AGTGAGTAGAAGGAGACATCCACCTGCCCGGCACGGGACTTTCTGCTTACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR CCA 90 bp TGCTGGCAGGTAGTGAGGCCAATCAAAGGGCAGTTTTGCTGGGTACCCTGGTATTACTCTCTCCCTGTCTaGCACTGCAACTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: CWQVVRPIKGQFCWVPWYYSLPV*HCNCLL
Trigger: CAGGAGACAGTTGCAGTGCCAGACAGGGAGAGAGTA...ATACCAGGGTACCCAGCAAAACTGCCCTTTGATTGGCCTCACTACCTGCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR CCA 90 bp TGCTGGCAGGTAGTGAGGCCAATCAAAGGGCAGTTTTGCTGGGTACCCTGGTATTCACAGCCTGGCTGCTaGGTGTTGCATACAAAATCA +
Preference number: 4 (lower is better)
Translates to: CWQVVRPIKGQFCWVPWYSQPGC*VLHTKS
Trigger: TGATTTTGTATGCAACACCCAGCAGCCAGGCTGTGA...ATACCAGGGTACCCAGCAAAACTGCCCTTTGATTGGCCTCACTACCTGCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR CCA 90 bp TGCTGGCAGGTAGTGAGGCCAATCAAAGGGCAGTTTTGCTGGGTACCCTGGTATCCTTGGCTTTCTGGATaGAGGAAACTGCAATGGAGT +
Preference number: 4 (lower is better)
Translates to: CWQVVRPIKGQFCWVPWYPWLSG*RKLQWS
Trigger: ACTCCATTGCAGTTTCCTCCATCCAGAAAGCCAAGG...ATACCAGGGTACCCAGCAAAACTGCCCTTTGATTGGCCTCACTACCTGCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR CCA 90 bp TGCTGGCAGGTAGTGAGGCCAATCAAAGGGCAGTTTTGCTGGGTACCCTGGTATCAGACAGCCCTTGCTTaGTTACCTTTTCAGCTTGCA +
Preference number: 4 (lower is better)
Translates to: CWQVVRPIKGQFCWVPWYQTALA*LPFQLA
Trigger: TGCAAGCTGAAAAGGTAACCAAGCAAGGGCTGTCTG...ATACCAGGGTACCCAGCAAAACTGCCCTTTGATTGGCCTCACTACCTGCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR GCA 90 bp GGACCTGACAGGAGCCCAGCGGCAGCTGAAGAAGAGATGTCGTGTAACAATCACCATACAAAATCAGATTaGTCATCGCCCCACACAAAC +
Preference number: 4 (lower is better)
Translates to: GPDRSPAAAEEEMSCNNHHTKSD*SSPHTN
Trigger: GTTTGTGTGGGGCGATGAGCAATCTGATTTTGTATG...GTGATTGTTACACGACATCTCTTCTTCAGCTGCCGCTGGGCTCCTGTCAGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR TCA 90 bp CCAACCTATATGCCTTTTTGTTGGGAAGGGCAAAAGGAAATGGCAGGATATGTGAGTAATGGCCCACGATaGAGCCCACCTCAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: PTYMPFCWEGQKEMAGYVSNGPR*SPPQRG
Trigger: CCCTCTTTGAGGTGGGCTTCATCGTGGGCCATTACT...CACATATCCTGCCATTTCCTTTTGCCCTTCCCAACAAAAAGGCATATAGGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR TCA 90 bp GGACCTGACAGGAGCCCAGCGGCAGCTGAAGAAGAGATGTCGTGTAACAATCACCAAAGGGAAATAGTGTaGTACGATCTTCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GPDRSPAAAEEEMSCNNHQREIV*YDLLFF
Trigger: GAAGAAGAGAAGATCGTATCACACTATTTCCCTTTG...GTGATTGTTACACGACATCTCTTCTTCAGCTGCCGCTGGGCTCCTGTCAGGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CAA 72 bp GGGGTGGACCAAGGGACACATAAGACTCAAAGTATATaGGCACCAGCTGGGTTTATCTTGGTCTGTATTGGC +
Preference number: 4 (lower is better)
Translates to: GVDQGTHKTQSI*APAGFILVCIG
Trigger: GCCAATACAGACCAAGATAAACCCAGCTGGTGCCAATATACTTTGAGTCTTATGTGTCCCTTGGTCCACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CAA 72 bp ATCAGCTCCTGCCTCCTGGTTCCTGCCCTGTTTAAATaGCTGTCTGGGTTTCCTTCAGTGATAGATGACAGT +
Preference number: 4 (lower is better)
Translates to: ISSCLLVPALFK*LSGFPSVIDDS
Trigger: ACTGTCATCTATCACTGAAGGAAACCCAGACAGCAATTTAAACAGGGCAGGAACCAGGAGGCAGGAGCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CAA 72 bp TCCAGAGCATCATACTCCTGGGTCAGTCATGATTATTaGTCCCCCAAACAGAGGGCAGGGATGAGCTACAAA +
Preference number: 4 (lower is better)
Translates to: SRASYSWVSHDY*SPKQRAGMSYK
Trigger: TTTGTAGCTCATCCCTGCCCTCTGTTTGGGGGACAAATAATCATGACTGACCCAGGAGTATGATGCTCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR TCA 90 bp CCATCTTTCATGACCCTACCTCTCTCTGTCATATTACAGCATGGAAACATTTGCGCCAGACTCTGCCGATaGCAGTGGAGTGCTCATTCA +
Preference number: 4 (lower is better)
Translates to: PSFMTLPLSVILQHGNICARLCR*QWSAHS
Trigger: TGAATGAGCACTCCACTGTCATCGGCAGAGTCTGGC...GCAAATGTTTCCATGCTGTAATATGACAGAGAGAGGTAGGGTCATGAAAGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR GCA 90 bp CCATCTTTCATGACCCTACCTCTCTCTGTCATATTACAGCATGGAAACATTTGCTTCGCTTCTCCTCCATaGGAACGTGGTGTACCGCGT +
Preference number: 4 (lower is better)
Translates to: PSFMTLPLSVILQHGNICFASPP*ERGVPR
Trigger: ACGCGGTACACCACGTTCGCATGGAGGAGAAGCGAA...GCAAATGTTTCCATGCTGTAATATGACAGAGAGAGGTAGGGTCATGAAAGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR GCA 90 bp TCCCTGTTGTTGGTGCCTGTGTCTGCTTCTTCCAACCTATATGCCTTTTTGTTGCTGGATGGAGGAAACTaGAATGGAGTGGAGGGACTT +
Preference number: 4 (lower is better)
Translates to: SLLLVPVSASSNLYAFLLLDGGN*NGVEGL
Trigger: AAGTCCCTCCACTCCATTGCAGTTTCCTCCATCCAG...CAACAAAAAGGCATATAGGTTGGAAGAAGCAGACACAGGCACCAACAACAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR GCA 90 bp CCATCTTTCATGACCCTACCTCTCTCTGTCATATTACAGCATGGAAACATTTGCACCGGATTCCTTTCATaGCCAGGTGGCTCATCTCCA +
Preference number: 4 (lower is better)
Translates to: PSFMTLPLSVILQHGNICTGFLS*PGGSSP
Trigger: TGGAGATGAGCCACCTGGGCATGAAAGGAATCCGGT...GCAAATGTTTCCATGCTGTAATATGACAGAGAGAGGTAGGGTCATGAAAGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR GCA 90 bp AAACCATTCAGTGAGTTTATCTTTGAAACTGTTATGGCTGAGAATGTGGCACCAACTGCAACTGTCTCCTaGCCTTCTGGGGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: KPFSEFIFETVMAENVAPTATVS*PSGATF
Trigger: GAAGGTGGCCCCAGAAGGGCAGGAGACAGTTGCAGT...TGGTGCCACATTCTCAGCCATAACAGTTTCAAAGATAAACTCACTGAATGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR GCA 90 bp CCAACCTATATGCCTTTTTGTTGGGAAGGGCAAAAGGAAATGGCAGGATATGTGTGGCTTTACTCAGCCTaGTCAAGGGCCGATTGTCAT +
Preference number: 4 (lower is better)
Translates to: PTYMPFCWEGQKEMAGYVWLYSA*SRADCH
Trigger: ATGACAATCGGCCCTTGAGCAGGCTGAGTAAAGCCA...CACATATCCTGCCATTTCCTTTTGCCCTTCCCAACAAAAAGGCATATAGGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR GCA 90 bp AAACCATTCAGTGAGTTTATCTTTGAAACTGTTATGGCTGAGAATGTGGCACCACATCTGACCTGGCCCTaGTGCTGGCTTTACTCAGCC +
Preference number: 4 (lower is better)
Translates to: KPFSEFIFETVMAENVAPHLTWP*CWLYSA
Trigger: GGCTGAGTAAAGCCAGCAGCAGGGCCAGGTCAGATG...TGGTGCCACATTCTCAGCCATAACAGTTTCAAAGATAAACTCACTGAATGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CAA 72 bp CCTGTGTCTGCTTCTTCCAACCTATATGCCTTTTTGTaGGGAAGGGCAAAAGGAAATGGCAGGATATGTGAG +
Preference number: 4 (lower is better)
Translates to: PVSASSNLYAFL*GRAKGNGRICE
Trigger: CTCACATATCCTGCCATTTCCTTTTGCCCTTCCCAACAAAAAGGCATATAGGTTGGAAGAAGCAGACACAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
3UTR CAA 72 bp GTGCCTGTGTCTGCTTCTTCCAACCTATATGCCTTTTaGTTGGGAAGGGCAAAAGGAAATGGCAGGATATGT +
Preference number: 4 (lower is better)
Translates to: VPVSASSNLYAF*LGRAKGNGRIC
Trigger: ACATATCCTGCCATTTCCTTTTGCCCTTCCCAACAAAAAGGCATATAGGTTGGAAGAAGCAGACACAGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR GCA 90 bp ACACATAAGACTCAAAGTATATTGGCACCAGCTGGGTTTATCTTGGTCTGTATTATCTCCCCCAGTGGTTaGTCTACAGGCCTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: THKTQSILAPAGFILVCIISPSG*STGLLK
Trigger: CTTCAAGAGGCCTGTAGAGCAACCACTGGGGGAGAT...AATACAGACCAAGATAAACCCAGCTGGTGCCAATATACTTTGAGTCTTATGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR GCA 90 bp AAGGATTTTTGTTGCTTCAGGGAAGAAAACTGCAATTGGCTTGAAAGCCTAAAACTGCCAGGGGTCCTGTaGCGATCTTCTCCTCAAACT +
Preference number: 4 (lower is better)
Translates to: KDFCCFREENCNWLESLKLPGVL*RSSPQT
Trigger: AGTTTGAGGAGAAGATCGGCACAGGACCCCTGGCAG...TTTTAGGCTTTCAAGCCAATTGCAGTTTTCTTCCCTGAAGCAACAAAAATCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR GCA 90 bp CCAACCTATATGCCTTTTTGTTGGGAAGGGCAAAAGGAAATGGCAGGATATGTGGTTACCTTTTCAGCTTaGAGCTCTTCTTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: PTYMPFCWEGQKEMAGYVVTFSA*SSSFSS
Trigger: GGATGAGAAAGAAGAGCTGCAAGCTGAAAAGGTAAC...CACATATCCTGCCATTTCCTTTTGCCCTTCCCAACAAAAAGGCATATAGGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR CCA 90 bp AAGGATTTTTGTTGCTTCAGGGAAGAAAACTGCAATTGGCTTGAAAGCCTAAAAAGCAATCTCCCCCAGTaGTTGCTCTACAGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: KDFCCFREENCNWLESLKSNLPQ*LLYRPL
Trigger: AAGAGGCCTGTAGAGCAACCACTGGGGGAGATTGCT...TTTTAGGCTTTCAAGCCAATTGCAGTTTTCTTCCCTGAAGCAACAAAAATCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR GCA 90 bp CATGACCCTACCTCTCTCTGTCATATTACAGCATGGAAACATTTGCTATTTAAAACTTCTTGGTGCCTTTaGTACTGCTGCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: HDPTSLCHITAWKHLLFKTSWCL*YCCCSS
Trigger: GGAAGAGCAGCAGCAGTAGCAAAGGCACCAAGAAGT...TTTAAATAGCAAATGTTTCCATGCTGTAATATGACAGAGAGAGGTAGGGTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR CCA 90 bp AAACCATTCAGTGAGTTTATCTTTGAAACTGTTATGGCTGAGAATGTGGCACCAGAAACTGCAATGGAGTaGAGGGACTTCTCAGCAATC +
Preference number: 4 (lower is better)
Translates to: KPFSEFIFETVMAENVAPETAME*RDFSAI
Trigger: GATTGCTGAGAAGTCCCTCCACTCCATTGCAGTTTC...TGGTGCCACATTCTCAGCCATAACAGTTTCAAAGATAAACTCACTGAATGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR CCA 90 bp CATGACCCTACCTCTCTCTGTCATATTACAGCATGGAAACATTTGCTATTTAAATGGAGGAAACTGCAATaGAGTGGAGGGACTTCTCAG +
Preference number: 4 (lower is better)
Translates to: HDPTSLCHITAWKHLLFKWRKLQ*SGGTSQ
Trigger: CTGAGAAGTCCCTCCACTCCATTGCAGTTTCCTCCA...TTTAAATAGCAAATGTTTCCATGCTGTAATATGACAGAGAGAGGTAGGGTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS CCA 90 bp GGTGCCTTTGCTACTGCTGCTGCTCTTCCGGATGCTGGCCTGGTCTaGGGCGATTGGTACCCTCTCACCCCCGTTGCTGCGCGACTGCTG +
Preference number: 5 (lower is better)
Translates to: GAFATAAALPDAGLV*GDWYPLTPVAARLL
Trigger: CAGCAGTCGCGCAGCAACGGGGGTGAGAGGGTACCAATCGCCCCAGACCAGGCCAGCATCCGGAAGAGCAGCAGCAGTAGCAAAGGCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS GCA 90 bp TGCTGGCCTGGTCTGGGGCGATTGGTACCCTCTCACCCCCGTTGCTaGGCGACTGCTGACAGAGCTCCTCAGCTTCACGGTCCTTTCGCT +
Preference number: 5 (lower is better)
Translates to: CWPGLGRLVPSHPRC*ATADRAPQLHGPFA
Trigger: AGCGAAAGGACCGTGAAGCTGAGGAGCTCTGTCAGCAGTCGCGCAGCAACGGGGGTGAGAGGGTACCAATCGCCCCAGACCAGGCCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS GCA 90 bp GCCGGAACTTCTTGGTGCCTTTGCTACTGCTGCTGCTCTTCCGGATaGTGGCCTGGTCTGGGGCGATTGGTACCCTCTCACCCCCGTTGC +
Preference number: 5 (lower is better)
Translates to: AGTSWCLCYCCCSSG*WPGLGRLVPSHPRC
Trigger: GCAACGGGGGTGAGAGGGTACCAATCGCCCCAGACCAGGCCAGCATCCGGAAGAGCAGCAGCAGTAGCAAAGGCACCAAGAAGTTCCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS GCA 90 bp GCAGTGTGCCCTCCAGCCGGAACTTCTTGGTGCCTTTGCTACTGCTaGTGCTCTTCCGGATGCTGGCCTGGTCTGGGGCGATTGGTACCC +
Preference number: 5 (lower is better)
Translates to: AVCPPAGTSWCLCYC*CSSGCWPGLGRLVP
Trigger: GGGTACCAATCGCCCCAGACCAGGCCAGCATCCGGAAGAGCAGCAGCAGTAGCAAAGGCACCAAGAAGTTCCGGCTGGAGGGCACACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS CCA 90 bp TTCTTGGTGCCTTTGCTACTGCTGCTGCTCTTCCGGATGCTGGCCTaGTCTGGGGCGATTGGTACCCTCTCACCCCCGTTGCTGCGCGAC +
Preference number: 5 (lower is better)
Translates to: FLVPLLLLLLFRMLA*SGAIGTLSPPLLRD
Trigger: GTCGCGCAGCAACGGGGGTGAGAGGGTACCAATCGCCCCAGACCAGGCCAGCATCCGGAAGAGCAGCAGCAGTAGCAAAGGCACCAAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS TCA 90 bp TCTGGGGCGATTGGTACCCTCTCACCCCCGTTGCTGCGCGACTGCTaGCAGAGCTCCTCAGCTTCACGGTCCTTTCGCTTCTCCTCCATG +
Preference number: 5 (lower is better)
Translates to: SGAIGTLSPPLLRDC*QSSSASRSFRFSSM
Trigger: CATGGAGGAGAAGCGAAAGGACCGTGAAGCTGAGGAGCTCTGTCAGCAGTCGCGCAGCAACGGGGGTGAGAGGGTACCAATCGCCCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS GCA 90 bp GTGTGCCCTCCAGCCGGAACTTCTTGGTGCCTTTGCTACTGCTGCTaGTCTTCCGGATGCTGGCCTGGTCTGGGGCGATTGGTACCCTCT +
Preference number: 5 (lower is better)
Translates to: VCPPAGTSWCLCYCC*SSGCWPGLGRLVPS
Trigger: AGAGGGTACCAATCGCCCCAGACCAGGCCAGCATCCGGAAGAGCAGCAGCAGTAGCAAAGGCACCAAGAAGTTCCGGCTGGAGGGCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS GCA 90 bp AGGTCCTTAGCAGTGTGCCCTCCAGCCGGAACTTCTTGGTGCCTTTaGTACTGCTGCTGCTCTTCCGGATGCTGGCCTGGTCTGGGGCGA +
Preference number: 5 (lower is better)
Translates to: RSLAVCPPAGTSWCL*YCCCSSGCWPGLGR
Trigger: TCGCCCCAGACCAGGCCAGCATCCGGAAGAGCAGCAGCAGTAGCAAAGGCACCAAGAAGTTCCGGCTGGAGGGCACACTGCTAAGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS CCA 90 bp GGAACTTCTTGGTGCCTTTGCTACTGCTGCTGCTCTTCCGGATGCTaGCCTGGTCTGGGGCGATTGGTACCCTCTCACCCCCGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: GTSWCLCYCCCSSGC*PGLGRLVPSHPRCC
Trigger: GCAGCAACGGGGGTGAGAGGGTACCAATCGCCCCAGACCAGGCCAGCATCCGGAAGAGCAGCAGCAGTAGCAAAGGCACCAAGAAGTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS GCA 90 bp GCTGACAGAGCTCCTCAGCTTCACGGTCCTTTCGCTTCTCCTCCATaGGAACGTGGTGTACCGCGTGCCCCACGTACATCAGCGATGGAG +
Preference number: 5 (lower is better)
Translates to: ADRAPQLHGPFASPP*ERGVPRAPRTSAME
Trigger: CTCCATCGCTGATGTACGTGGGGCACGCGGTACACCACGTTCGCATGGAGGAGAAGCGAAAGGACCGTGAAGCTGAGGAGCTCTGTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS CCA 90 bp AGCTCCTCAGCTTCACGGTCCTTTCGCTTCTCCTCCATGCGAACGTaGTGTACCGCGTGCCCCACGTACATCAGCGATGGAGTGGAGACG +
Preference number: 5 (lower is better)
Translates to: SSSASRSFRFSSMRT*CTACPTYISDGVET
Trigger: CGTCTCCACTCCATCGCTGATGTACGTGGGGCACGCGGTACACCACGTTCGCATGGAGGAGAAGCGAAAGGACCGTGAAGCTGAGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS GCA 90 bp TTAGCAGTGTGCCCTCCAGCCGGAACTTCTTGGTGCCTTTGCTACTaGTGCTGCTCTTCCGGATGCTGGCCTGGTCTGGGGCGATTGGTA +
Preference number: 5 (lower is better)
Translates to: LAVCPPAGTSWCLCY*CCSSGCWPGLGRLV
Trigger: TACCAATCGCCCCAGACCAGGCCAGCATCCGGAAGAGCAGCAGCAGTAGCAAAGGCACCAAGAAGTTCCGGCTGGAGGGCACACTGCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS CCA 90 bp GGCAGACATAGGTCCTTAGCAGTGTGCCCTCCAGCCGGAACTTCTTaGTGCCTTTGCTACTGCTGCTGCTCTTCCGGATGCTGGCCTGGT +
Preference number: 5 (lower is better)
Translates to: GRHRSLAVCPPAGTS*CLCYCCCSSGCWPG
Trigger: ACCAGGCCAGCATCCGGAAGAGCAGCAGCAGTAGCAAAGGCACCAAGAAGTTCCGGCTGGAGGGCACACTGCTAAGGACCTATGTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS GCA 90 bp AGACATAGGTCCTTAGCAGTGTGCCCTCCAGCCGGAACTTCTTGGTaGCTTTGCTACTGCTGCTGCTCTTCCGGATGCTGGCCTGGTCTG +
Preference number: 5 (lower is better)
Translates to: RHRSLAVCPPAGTSW*LCYCCCSSGCWPGL
Trigger: CAGACCAGGCCAGCATCCGGAAGAGCAGCAGCAGTAGCAAAGGCACCAAGAAGTTCCGGCTGGAGGGCACACTGCTAAGGACCTATGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS TCA 90 bp CCTGCTCAAGGGCCGATTGTCATCGGTTGTCAGCTCCGGACAGAGTaGGGGTGCCTTCTCAGCAGACAGCCCTTGCTTGGTTACCTTTTC +
Preference number: 5 (lower is better)
Translates to: PAQGPIVIGCQLRTE*GCLLSRQPLLGYLF
Trigger: GAAAAGGTAACCAAGCAAGGGCTGTCTGCTGAGAAGGCACCCTCACTCTGTCCGGAGCTGACAACCGATGACAATCGGCCCTTGAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS GCA 90 bp ACTGCAATGGAGTGGAGGGACTTCTCAGCAATCTCCCCCAGTGGTTaGTCTACAGGCCTCTTGAAGGCAGACCGGATTCCTTTCATGCCC +
Preference number: 5 (lower is better)
Translates to: TAMEWRDFSAISPSG*STGLLKADRIPFMP
Trigger: GGGCATGAAAGGAATCCGGTCTGCCTTCAAGAGGCCTGTAGAGCAACCACTGGGGGAGATTGCTGAGAAGTCCCTCCACTCCATTGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS TCA 90 bp CGTGACATATCTGCCAGGGGTCCTGTGCCGATCTTCTCCTCAAACTaGCTAAAAGGCTTGGCCGAAAGAGGGCTGGTCTCCACCATTCCA +
Preference number: 5 (lower is better)
Translates to: RDISARGPVPIFSSN*LKGLAERGLVSTIP
Trigger: TGGAATGGTGGAGACCAGCCCTCTTTCGGCCAAGCCTTTTAGTCAGTTTGAGGAGAAGATCGGCACAGGACCCCTGGCAGATATGTCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS TCA 90 bp GACCCCCACCTGAGCATAAGAAGGCAGGGTTTCTTGGTAACTCCGTaGCATATCTGCCAGGGGTCCTGTGCCGATCTTCTCCTCAAACTG +
Preference number: 5 (lower is better)
Translates to: DPHLSIRRQGFLVTP*HICQGSCADLLLKL
Trigger: CAGTTTGAGGAGAAGATCGGCACAGGACCCCTGGCAGATATGTCACGGAGTTACCAAGAAACCCTGCCTTCTTATGCTCAGGTGGGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR CAA 90 bp AAGCTCTCAGGAAGTGGCGTCACAAAGCAGGCTCCAAGTGTGGTAGCCAACTCATCCAGCCGGAACTTCTaGGTGCCTTTGCTACTGCTG +
Preference number: 5 (lower is better)
Translates to: KLSGSGVTKQAPSVVANSSSRNF*VPLLLL
Trigger: CAGCAGTAGCAAAGGCACCAAGAAGTTCCGGCTGGA...TGAGTTGGCTACCACACTTGGAGCCTGCTTTGTGACGCCACTTCCTGAGAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR CAA 90 bp GGACCTGACAGGAGCCCAGCGGCAGCTGAAGAAGAGATGTCGTGTAACAATCACCTCAGCAGACAGCCCTaGCTTGGTTACCTTTTCAGC +
Preference number: 5 (lower is better)
Translates to: GPDRSPAAAEEEMSCNNHLSRQP*LGYLFS
Trigger: GCTGAAAAGGTAACCAAGCAAGGGCTGTCTGCTGAG...GTGATTGTTACACGACATCTCTTCTTCAGCTGCCGCTGGGCTCCTGTCAGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS CCA 90 bp GGAAACTGCAATGGAGTGGAGGGACTTCTCAGCAATCTCCCCCAGTaGTTGCTCTACAGGCCTCTTGAAGGCAGACCGGATTCCTTTCAT +
Preference number: 5 (lower is better)
Translates to: GNCNGVEGLLSNLPQ*LLYRPLEGRPDSFH
Trigger: ATGAAAGGAATCCGGTCTGCCTTCAAGAGGCCTGTAGAGCAACCACTGGGGGAGATTGCTGAGAAGTCCCTCCACTCCATTGCAGTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS CCA 90 bp CTAGAAGCTGGTAGCCCTTGGCTTTCTGGATGGAGGAAACTGCAATaGAGTGGAGGGACTTCTCAGCAATCTCCCCCAGTGGTTGCTCTA +
Preference number: 5 (lower is better)
Translates to: LEAGSPWLSGWRKLQ*SGGTSQQSPPVVAL
Trigger: TAGAGCAACCACTGGGGGAGATTGCTGAGAAGTCCCTCCACTCCATTGCAGTTTCCTCCATCCAGAAAGCCAAGGGCTACCAGCTTCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR CAA 90 bp TTGAAAAATCCCACCCATCCTCCCAGTGTGGCTGCTCATGAGGGTTTCCCAGTGCCTGGCTGCTGGGTGTaGCATACAAAATCAGATTGC +
Preference number: 5 (lower is better)
Translates to: LKNPTHPPSVAAHEGFPVPGCWV*HTKSDC
Trigger: GCAATCTGATTTTGTATGCAACACCCAGCAGCCAGG...CACTGGGAAACCCTCATGAGCAGCCACACTGGGAGGATGGGTGGGATTTTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR CAA 90 bp CCAACCTATATGCCTTTTTGTTGGGAAGGGCAAAAGGAAATGGCAGGATATGTGAAGCAGTCTACCACATaGGGGCAGGGCCACCGGCTG +
Preference number: 5 (lower is better)
Translates to: PTYMPFCWEGQKEMAGYVKQSTT*GQGHRL
Trigger: CAGCCGGTGGCCCTGCCCCAATGTGGTAGACTGCTT...CACATATCCTGCCATTTCCTTTTGCCCTTCCCAACAAAAAGGCATATAGGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS CCA 90 bp TCTACAGGCCTCTTGAAGGCAGACCGGATTCCTTTCATGCCCAGGTaGCTCATCTCCATGATGTTGAGGAAGAGTGACACAAAAGCGACT +
Preference number: 5 (lower is better)
Translates to: STGLLKADRIPFMPR*LISMMLRKSDTKAT
Trigger: AGTCGCTTTTGTGTCACTCTTCCTCAACATCATGGAGATGAGCCACCTGGGCATGAAAGGAATCCGGTCTGCCTTCAAGAGGCCTGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR CAA 90 bp AAGCTCTCAGGAAGTGGCGTCACAAAGCAGGCTCCAAGTGTGGTAGCCAACTCAGCATACAAAATCAGATaGCTCATCGCCCCACACAAA +
Preference number: 5 (lower is better)
Translates to: KLSGSGVTKQAPSVVANSAYKIR*LIAPHK
Trigger: TTTGTGTGGGGCGATGAGCAATCTGATTTTGTATGC...TGAGTTGGCTACCACACTTGGAGCCTGCTTTGTGACGCCACTTCCTGAGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR CAA 90 bp AAGCTCTCAGGAAGTGGCGTCACAAAGCAGGCTCCAAGTGTGGTAGCCAACTCACTCATCTCCATGATGTaGAGGAAGAGTGACACAAAA +
Preference number: 5 (lower is better)
Translates to: KLSGSGVTKQAPSVVANSLISMM*RKSDTK
Trigger: TTTTGTGTCACTCTTCCTCAACATCATGGAGATGAG...TGAGTTGGCTACCACACTTGGAGCCTGCTTTGTGACGCCACTTCCTGAGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR CAA 90 bp CCAACCTATATGCCTTTTTGTTGGGAAGGGCAAAAGGAAATGGCAGGATATGTGTGCTCTACAGGCCTCTaGAAGGCAGACCGGATTCCT +
Preference number: 5 (lower is better)
Translates to: PTYMPFCWEGQKEMAGYVCSTGL*KADRIP
Trigger: AGGAATCCGGTCTGCCTTCAAGAGGCCTGTAGAGCA...CACATATCCTGCCATTTCCTTTTGCCCTTCCCAACAAAAAGGCATATAGGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR CAA 90 bp AAACCATTCAGTGAGTTTATCTTTGAAACTGTTATGGCTGAGAATGTGGCACCAAATCTCCCCCAGTGGTaGCTCTACAGGCCTCTTGAA +
Preference number: 5 (lower is better)
Translates to: KPFSEFIFETVMAENVAPNLPQW*LYRPLE
Trigger: TTCAAGAGGCCTGTAGAGCAACCACTGGGGGAGATT...TGGTGCCACATTCTCAGCCATAACAGTTTCAAAGATAAACTCACTGAATGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS-3UTR CAA 90 bp ACACATAAGACTCAAAGTATATTGGCACCAGCTGGGTTTATCTTGGTCTGTATTAACTTCTTGGTGCCTTaGCTACTGCTGCTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: THKTQSILAPAGFILVCINFLVP*LLLLLF
Trigger: GAAGAGCAGCAGCAGTAGCAAAGGCACCAAGAAGTT...AATACAGACCAAGATAAACCCAGCTGGTGCCAATATACTTTGAGTCTTATGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS CCA 72 bp GCTACTGCTGCTGCTCTTCCGGATGCTGGCCTGGTCTaGGGCGATTGGTACCCTCTCACCCCCGTTGCTGCG +
Preference number: 6 (lower is better)
Translates to: ATAAALPDAGLV*GDWYPLTPVAA
Trigger: CGCAGCAACGGGGGTGAGAGGGTACCAATCGCCCCAGACCAGGCCAGCATCCGGAAGAGCAGCAGCAGTAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS GCA 72 bp GGTCTGGGGCGATTGGTACCCTCTCACCCCCGTTGCTaGGCGACTGCTGACAGAGCTCCTCAGCTTCACGGT +
Preference number: 6 (lower is better)
Translates to: GLGRLVPSHPRC*ATADRAPQLHG
Trigger: ACCGTGAAGCTGAGGAGCTCTGTCAGCAGTCGCGCAGCAACGGGGGTGAGAGGGTACCAATCGCCCCAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS GCA 72 bp CCTGGTCTGGGGCGATTGGTACCCTCTCACCCCCGTTaGTGCGCGACTGCTGACAGAGCTCCTCAGCTTCAC +
Preference number: 6 (lower is better)
Translates to: PGLGRLVPSHPR*CATADRAPQLH
Trigger: GTGAAGCTGAGGAGCTCTGTCAGCAGTCGCGCAGCAACGGGGGTGAGAGGGTACCAATCGCCCCAGACCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS CAA 90 bp TGCTACTGCTGCTGCTCTTCCGGATGCTGGCCTGGTCTGGGGCGATaGGTACCCTCTCACCCCCGTTGCTGCGCGACTGCTGACAGAGCT +
Preference number: 6 (lower is better)
Translates to: CYCCCSSGCWPGLGR*VPSHPRCCATADRA
Trigger: AGCTCTGTCAGCAGTCGCGCAGCAACGGGGGTGAGAGGGTACCAATCGCCCCAGACCAGGCCAGCATCCGGAAGAGCAGCAGCAGTAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS GCA 72 bp CCTCCAGCCGGAACTTCTTGGTGCCTTTGCTACTGCTaGTGCTCTTCCGGATGCTGGCCTGGTCTGGGGCGA +
Preference number: 6 (lower is better)
Translates to: PPAGTSWCLCYC*CSSGCWPGLGR
Trigger: TCGCCCCAGACCAGGCCAGCATCCGGAAGAGCAGCAGCAGTAGCAAAGGCACCAAGAAGTTCCGGCTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS GCA 72 bp TGCCCTCCAGCCGGAACTTCTTGGTGCCTTTGCTACTaGTGCTGCTCTTCCGGATGCTGGCCTGGTCTGGGG +
Preference number: 6 (lower is better)
Translates to: CPPAGTSWCLCY*CCSSGCWPGLG
Trigger: CCCCAGACCAGGCCAGCATCCGGAAGAGCAGCAGCAGTAGCAAAGGCACCAAGAAGTTCCGGCTGGAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS CCA 72 bp CCTTTGCTACTGCTGCTGCTCTTCCGGATGCTGGCCTaGTCTGGGGCGATTGGTACCCTCTCACCCCCGTTG +
Preference number: 6 (lower is better)
Translates to: PLLLLLLFRMLA*SGAIGTLSPPL
Trigger: CAACGGGGGTGAGAGGGTACCAATCGCCCCAGACCAGGCCAGCATCCGGAAGAGCAGCAGCAGTAGCAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS CCA 72 bp TGGTGCCTTTGCTACTGCTGCTGCTCTTCCGGATGCTaGCCTGGTCTGGGGCGATTGGTACCCTCTCACCCC +
Preference number: 6 (lower is better)
Translates to: WCLCYCCCSSGC*PGLGRLVPSHP
Trigger: GGGGTGAGAGGGTACCAATCGCCCCAGACCAGGCCAGCATCCGGAAGAGCAGCAGCAGTAGCAAAGGCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS GCA 72 bp CCAGCCGGAACTTCTTGGTGCCTTTGCTACTGCTGCTaGTCTTCCGGATGCTGGCCTGGTCTGGGGCGATTG +
Preference number: 6 (lower is better)
Translates to: PAGTSWCLCYCC*SSGCWPGLGRL
Trigger: CAATCGCCCCAGACCAGGCCAGCATCCGGAAGAGCAGCAGCAGTAGCAAAGGCACCAAGAAGTTCCGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS GCA 72 bp GCAGTGTGCCCTCCAGCCGGAACTTCTTGGTGCCTTTaGTACTGCTGCTGCTCTTCCGGATGCTGGCCTGGT +
Preference number: 6 (lower is better)
Translates to: AVCPPAGTSWCL*YCCCSSGCWPG
Trigger: ACCAGGCCAGCATCCGGAAGAGCAGCAGCAGTAGCAAAGGCACCAAGAAGTTCCGGCTGGAGGGCACACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS CAA 72 bp AGCAGTGTGCCCTCCAGCCGGAACTTCTTGGTGCCTTaGCTACTGCTGCTGCTCTTCCGGATGCTGGCCTGG +
Preference number: 6 (lower is better)
Translates to: SSVPSSRNFLVP*LLLLLFRMLAW
Trigger: CCAGGCCAGCATCCGGAAGAGCAGCAGCAGTAGCAAAGGCACCAAGAAGTTCCGGCTGGAGGGCACACTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS TCA 72 bp ATTGGTACCCTCTCACCCCCGTTGCTGCGCGACTGCTaGCAGAGCTCCTCAGCTTCACGGTCCTTTCGCTTC +
Preference number: 6 (lower is better)
Translates to: IGTLSPPLLRDC*QSSSASRSFRF
Trigger: GAAGCGAAAGGACCGTGAAGCTGAGGAGCTCTGTCAGCAGTCGCGCAGCAACGGGGGTGAGAGGGTACCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS TCA 72 bp GGGCCGATTGTCATCGGTTGTCAGCTCCGGACAGAGTaGGGGTGCCTTCTCAGCAGACAGCCCTTGCTTGGT +
Preference number: 6 (lower is better)
Translates to: GPIVIGCQLRTE*GCLLSRQPLLG
Trigger: ACCAAGCAAGGGCTGTCTGCTGAGAAGGCACCCTCACTCTGTCCGGAGCTGACAACCGATGACAATCGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS GCA 72 bp GCTCCTCAGCTTCACGGTCCTTTCGCTTCTCCTCCATaGGAACGTGGTGTACCGCGTGCCCCACGTACATCA +
Preference number: 6 (lower is better)
Translates to: APQLHGPFASPP*ERGVPRAPRTS
Trigger: TGATGTACGTGGGGCACGCGGTACACCACGTTCGCATGGAGGAGAAGCGAAAGGACCGTGAAGCTGAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS GCA 72 bp CATCTGACCTGGCCCTGCTGCTGGCTTTACTCAGCCTaGTCAAGGGCCGATTGTCATCGGTTGTCAGCTCCG +
Preference number: 6 (lower is better)
Translates to: HLTWPCCWLYSA*SRADCHRLSAP
Trigger: CGGAGCTGACAACCGATGACAATCGGCCCTTGAGCAGGCTGAGTAAAGCCAGCAGCAGGGCCAGGTCAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS CCA 72 bp GCTTCACGGTCCTTTCGCTTCTCCTCCATGCGAACGTaGTGTACCGCGTGCCCCACGTACATCAGCGATGGA +
Preference number: 6 (lower is better)
Translates to: ASRSFRFSSMRT*CTACPTYISDG
Trigger: TCCATCGCTGATGTACGTGGGGCACGCGGTACACCACGTTCGCATGGAGGAGAAGCGAAAGGACCGTGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS TCA 72 bp CAGCAATCTCCCCCAGTGGTTGCTCTACAGGCCTCTTaGAGGCAGACCGGATTCCTTTCATGCCCAGGTGGC +
Preference number: 6 (lower is better)
Translates to: QQSPPVVALQAS*RQTGFLSCPGG
Trigger: GCCACCTGGGCATGAAAGGAATCCGGTCTGCCTTCAAGAGGCCTGTAGAGCAACCACTGGGGGAGATTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS GCA 72 bp TCCTTAGCAGTGTGCCCTCCAGCCGGAACTTCTTGGTaGCTTTGCTACTGCTGCTGCTCTTCCGGATGCTGG +
Preference number: 6 (lower is better)
Translates to: SLAVCPPAGTSW*LCYCCCSSGCW
Trigger: CCAGCATCCGGAAGAGCAGCAGCAGTAGCAAAGGCACCAAGAAGTTCCGGCTGGAGGGCACACTGCTAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS CAA 72 bp GGAGTGGAGGGACTTCTCAGCAATCTCCCCCAGTGGTaGCTCTACAGGCCTCTTGAAGGCAGACCGGATTCC +
Preference number: 6 (lower is better)
Translates to: GVEGLLSNLPQW*LYRPLEGRPDS
Trigger: GGAATCCGGTCTGCCTTCAAGAGGCCTGTAGAGCAACCACTGGGGGAGATTGCTGAGAAGTCCCTCCACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS CAA 72 bp CTGCTGCTGGCTTTACTCAGCCTGCTCAAGGGCCGATaGTCATCGGTTGTCAGCTCCGGACAGAGTGAGGGT +
Preference number: 6 (lower is better)
Translates to: LLLALLSLLKGR*SSVVSSGQSEG
Trigger: ACCCTCACTCTGTCCGGAGCTGACAACCGATGACAATCGGCCCTTGAGCAGGCTGAGTAAAGCCAGCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS TCA 72 bp TCTGCCAGGGGTCCTGTGCCGATCTTCTCCTCAAACTaGCTAAAAGGCTTGGCCGAAAGAGGGCTGGTCTCC +
Preference number: 6 (lower is better)
Translates to: SARGPVPIFSSN*LKGLAERGLVS
Trigger: GGAGACCAGCCCTCTTTCGGCCAAGCCTTTTAGTCAGTTTGAGGAGAAGATCGGCACAGGACCCCTGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS GCA 72 bp GAGTGGAGGGACTTCTCAGCAATCTCCCCCAGTGGTTaGTCTACAGGCCTCTTGAAGGCAGACCGGATTCCT +
Preference number: 6 (lower is better)
Translates to: EWRDFSAISPSG*STGLLKADRIP
Trigger: AGGAATCCGGTCTGCCTTCAAGAGGCCTGTAGAGCAACCACTGGGGGAGATTGCTGAGAAGTCCCTCCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS GCA 72 bp TCTACTCTCTCCCTGTCTGGCACTGCAACTGTCTCCTaGCCTTCTGGGGCCACCTTCTCTGCTTCTTGCTTC +
Preference number: 6 (lower is better)
Translates to: STLSLSGTATVS*PSGATFSASCF
Trigger: GAAGCAAGAAGCAGAGAAGGTGGCCCCAGAAGGGCAGGAGACAGTTGCAGTGCCAGACAGGGAGAGAGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS CAA 72 bp CTTTACTCAGCCTGCTCAAGGGCCGATTGTCATCGGTaGTCAGCTCCGGACAGAGTGAGGGTGCCTTCTCAG +
Preference number: 6 (lower is better)
Translates to: LYSACSRADCHR*SAPDRVRVPSQ
Trigger: CTGAGAAGGCACCCTCACTCTGTCCGGAGCTGACAACCGATGACAATCGGCCCTTGAGCAGGCTGAGTAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS CCA 72 bp AATGGAGTGGAGGGACTTCTCAGCAATCTCCCCCAGTaGTTGCTCTACAGGCCTCTTGAAGGCAGACCGGAT +
Preference number: 6 (lower is better)
Translates to: NGVEGLLSNLPQ*LLYRPLEGRPD
Trigger: ATCCGGTCTGCCTTCAAGAGGCCTGTAGAGCAACCACTGGGGGAGATTGCTGAGAAGTCCCTCCACTCCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS CAA 90 bp AACTGCAATGGAGTGGAGGGACTTCTCAGCAATCTCCCCCAGTGGTaGCTCTACAGGCCTCTTGAAGGCAGACCGGATTCCTTTCATGCC +
Preference number: 6 (lower is better)
Translates to: NCNGVEGLLSNLPQW*LYRPLEGRPDSFHA
Trigger: GGCATGAAAGGAATCCGGTCTGCCTTCAAGAGGCCTGTAGAGCAACCACTGGGGGAGATTGCTGAGAAGTCCCTCCACTCCATTGCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS TCA 72 bp CTGAGCATAAGAAGGCAGGGTTTCTTGGTAACTCCGTaGCATATCTGCCAGGGGTCCTGTGCCGATCTTCTC +
Preference number: 6 (lower is better)
Translates to: LSIRRQGFLVTP*HICQGSCADLL
Trigger: GAGAAGATCGGCACAGGACCCCTGGCAGATATGTCACGGAGTTACCAAGAAACCCTGCCTTCTTATGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS CCA 72 bp CTCTTGAAGGCAGACCGGATTCCTTTCATGCCCAGGTaGCTCATCTCCATGATGTTGAGGAAGAGTGACACA +
Preference number: 6 (lower is better)
Translates to: LLKADRIPFMPR*LISMMLRKSDT
Trigger: TGTGTCACTCTTCCTCAACATCATGGAGATGAGCCACCTGGGCATGAAAGGAATCCGGTCTGCCTTCAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS CCA 72 bp AGAGTGAGGGTGCCTTCTCAGCAGACAGCCCTTGCTTaGTTACCTTTTCAGCTTGCAGCTCTTCTTTCTCAT +
Preference number: 6 (lower is better)
Translates to: RVRVPSQQTALA*LPFQLAALLSH
Trigger: ATGAGAAAGAAGAGCTGCAAGCTGAAAAGGTAACCAAGCAAGGGCTGTCTGCTGAGAAGGCACCCTCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7
CDS CAA 90 bp GCAGACCGGATTCCTTTCATGCCCAGGTGGCTCATCTCCATGATGTaGAGGAAGAGTGACACAAAAGCGACTGATAACATGAAGAGGATG +
Preference number: 6 (lower is better)
Translates to: ADRIPFMPRWLISMM*RKSDTKATDNMKRM
Trigger: CATCCTCTTCATGTTATCAGTCGCTTTTGTGTCACTCTTCCTCAACATCATGGAGATGAGCCACCTGGGCATGAAAGGAATCCGGTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000062944.7